ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal33i03 |
|---|---|
| Clone Library Name | barley_pub |
>TT12_ARATH (Q9LYT3) TRANSPARENT TESTA 12 protein| Length = 507 Score = 88.2 bits (217), Expect = 2e-17 Identities = 42/136 (30%), Positives = 74/136 (54%) Frame = +1 Query: 166 VLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWATVTGYAFVTGMSGALETLCGQAYG 345 ++ ++ Y + V+VMF+GHLG++ LAGA++ Y + GM+ A++T+CGQAYG Sbjct: 63 IVVSVLNYMLSFVTVMFTGHLGSLQLAGASIATVGIQGLAYGIMLGMASAVQTVCGQAYG 122 Query: 346 AQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQEPEVSRAAAVFIRYQIPGL 525 A+ Y +G+ Q L+ ++ P+L + Q ++ +F R IP + Sbjct: 123 ARQYSSMGIICQRAMVLHLAAAVFLTFLYWYSGPILKTMGQSVAIAHEGQIFARGMIPQI 182 Query: 526 FAFSFLQCLLRYLQTQ 573 +AF+ + R+LQ Q Sbjct: 183 YAFALACPMQRFLQAQ 198
>YHJ2_YEAST (P38767) Hypothetical 64.2 kDa protein in SLT2-PUT2 intergenic| region Length = 581 Score = 87.0 bits (214), Expect = 4e-17 Identities = 59/182 (32%), Positives = 89/182 (48%), Gaps = 11/182 (6%) Frame = +1 Query: 61 ADGKDGEARPCSPA--W-----SGRLIDT---EEAWMQLQFAVPMVLTNMSYYSIPLVSV 210 A G D E RP A W SG+ I T E + A+P++ T + S+ L S+ Sbjct: 131 AIGPDEEERPAEIANTWESAIESGQKISTTFKRETQVITMNALPLIFTFILQNSLSLASI 190 Query: 211 MFSGHLGNVHLAGATLGNSWATVTGYAFVTGMSGALETLCGQAYGAQLYRMLGLYLQXXX 390 HLG L G TLG+ A +TG A + G+ L+TLC QAYGA+ Y ++G+ +Q Sbjct: 191 FSVSHLGTKELGGVTLGSMTANITGLAAIQGLCTCLDTLCAQAYGAKNYHLVGVLVQRCA 250 Query: 391 XXXXXXXXXXXXLW-LFTEPLLLCLHQEPEVSRAAAVFIRYQIPGLFAFSFLQCLLRYLQ 567 +W +++E +L + E E+ AA ++R G+ F +C R+LQ Sbjct: 251 VITILAFLPMMYVWFVWSEKILALMIPERELCALAANYLRVTAFGVPGFILFECGKRFLQ 310 Query: 568 TQ 573 Q Sbjct: 311 CQ 312
>YD338_YEAST (Q05497) Hypothetical 77.8 kDa protein in MRPS28-HXT7 intergenic| region Length = 695 Score = 76.6 bits (187), Expect = 5e-14 Identities = 45/148 (30%), Positives = 76/148 (51%) Frame = +1 Query: 130 EAWMQLQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWATVTGYAFVTGMS 309 EA + ++ P++ T + P+V + GHLG LA +L + + +T A G++ Sbjct: 228 EARVLASYSFPLIFTFLLEQIFPMVCSLTVGHLGKNELAAVSLASMTSNIT-LAIFEGIA 286 Query: 310 GALETLCGQAYGAQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQEPEVSRA 489 +L+TLC QAYG+ + +G++LQ +W ++EPLL + E E+ Sbjct: 287 TSLDTLCPQAYGSGRFYSVGVHLQRCIAFSLVIYIPFAVMWWYSEPLLSYIIPEKELINL 346 Query: 490 AAVFIRYQIPGLFAFSFLQCLLRYLQTQ 573 + F+R I G A+ F + L R+LQ Q Sbjct: 347 TSRFLRVLILGAPAYIFFENLKRFLQAQ 374
>YAO6_SCHPO (Q10085) Hypothetical protein C11D3.06 in chromosome I| Length = 455 Score = 75.9 bits (185), Expect = 9e-14 Identities = 43/140 (30%), Positives = 71/140 (50%) Frame = +1 Query: 154 AVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWATVTGYAFVTGMSGALETLCG 333 + P++L S+ SV+ +G LG L+ A +A TG+ G + A +TL Sbjct: 15 SAPVILGYALQNSLQTSSVIVTGRLGPSELSVAAFAYMFAMSTGWLIALGGTTAFDTLGS 74 Query: 334 QAYGAQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQEPEVSRAAAVFIRYQ 513 +GA + LG+ LQ +W +++P+L+ LHQ PE++ A+ F+RY Sbjct: 75 NLWGAGKKQELGILLQTGFIVLSILYLPICLVWWYSKPILIFLHQTPELAEASQKFLRYL 134 Query: 514 IPGLFAFSFLQCLLRYLQTQ 573 IPG + + L ++LQTQ Sbjct: 135 IPGGLGYVCFELLKKFLQTQ 154
>NORM_BORPA (Q7WAK9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 460 Score = 44.3 bits (103), Expect = 3e-04 Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 5/161 (3%) Frame = +1 Query: 100 AWSGRLIDTEEAWMQLQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWATV 279 AW L T L +P+VLTN++ ++ + V+F G LG+ LA + LG + T Sbjct: 9 AWKRELAAT------LALGLPLVLTNLAQMAMTVTDVIFIGRLGSQALAASALGANLFTA 62 Query: 280 TGYAFVTGMSGALETLCGQAYG--AQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFTEPLL 453 + F G+ A + A G R + ++ L E +L Sbjct: 63 IEF-FGLGLVAATAPMVAHALGRRGNTVRDVRRTVRQGLWTAVIYSVPGCLLLWHGEAIL 121 Query: 454 LCLHQEPEVSRAAAVFIR---YQIPGLFAFSFLQCLLRYLQ 567 L + Q PE++ A ++R + +P F L+ + LQ Sbjct: 122 LAIDQPPELAAQAGAYLRALMWAMPPFLGFLVLRSFVTALQ 162
>NORM_BORBR (Q7WJR0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 460 Score = 44.3 bits (103), Expect = 3e-04 Identities = 40/161 (24%), Positives = 67/161 (41%), Gaps = 5/161 (3%) Frame = +1 Query: 100 AWSGRLIDTEEAWMQLQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWATV 279 AW L T L +P+VLTN++ ++ + V+F G LG+ LA + LG + T Sbjct: 9 AWKRELAAT------LALGLPLVLTNLAQMAMTVTDVIFIGRLGSQALAASALGANLFTA 62 Query: 280 TGYAFVTGMSGALETLCGQAYG--AQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFTEPLL 453 + F G+ A + A G R + ++ L E +L Sbjct: 63 IEF-FGLGLVAATAPMVAHALGRRGNAVRDVRRTVRQGLWTAVIYSVPGCLLLWHGEAIL 121 Query: 454 LCLHQEPEVSRAAAVFIR---YQIPGLFAFSFLQCLLRYLQ 567 L + Q PE++ A ++R + +P F L+ + LQ Sbjct: 122 LAIDQPPELAAQAGAYLRALMWAMPPFLGFLVLRSFVAALQ 162
>NORM_PSESM (Q88BA2) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 460 Score = 42.7 bits (99), Expect = 8e-04 Identities = 38/143 (26%), Positives = 61/143 (42%), Gaps = 3/143 (2%) Frame = +1 Query: 127 EEAWMQLQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWATVTGYAFVTGM 306 +E W+ L+ A P++ + M++ + + G +G LAG LG + + + F G+ Sbjct: 7 KELWIILRLAGPLIASQMAHMLMVFTDTVMMGKIGPEALAGGGLGAATYSFISF-FCVGV 65 Query: 307 SGALETLCGQAYGAQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQ-EPEVS 483 A+ TL +GA + Q L EP+LL L Q E V Sbjct: 66 MAAVGTLVSIRHGAGDSEGVTRLTQAGLWLAWGMALIAALLLWNLEPILLQLGQAEANVH 125 Query: 484 RAAAVFIR--YQIPGLFAFSFLQ 546 AA I + +PGL +F L+ Sbjct: 126 MAAQFLITLPFALPGLLSFMALR 148
>NORM_RHILO (Q98D15) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 467 Score = 39.3 bits (90), Expect = 0.009 Identities = 37/136 (27%), Positives = 54/136 (39%), Gaps = 8/136 (5%) Frame = +1 Query: 127 EEAWMQ-----LQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWATVTGYA 291 E W Q L A PMVLTN+ ++ VM G LG LA LG + + Sbjct: 12 ENLWRQEIRATLALAWPMVLTNLGQTAMTATDVMMMGRLGPDTLASGALGANLYFMP-LI 70 Query: 292 FVTGMSGALETLCGQAYGAQLYRMLGL---YLQXXXXXXXXXXXXXXXLWLFTEPLLLCL 462 F G+ A + G + Y + L Q LW E +LL + Sbjct: 71 FGLGLMLATSPMIATELGRRRYSVRDLRRTVRQGLWLAILISIPIWIVLW-HGEAILLAM 129 Query: 463 HQEPEVSRAAAVFIRY 510 QEP ++ A +++R+ Sbjct: 130 GQEPALAHQAGIYLRW 145
>NORM_LISIN (Q92AG2) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 456 Score = 38.5 bits (88), Expect = 0.016 Identities = 39/149 (26%), Positives = 64/149 (42%), Gaps = 8/149 (5%) Frame = +1 Query: 136 WMQ-LQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS-WATVTGYAFVTGMS 309 W Q L P+V+T ++ +S+ SG+ N LAG +G+S WA V A +G+ Sbjct: 11 WKQFLTIFTPIVITQLTLFSMTFFDTTMSGNYSNQALAGVAIGSSFWAPVN--AAFSGLL 68 Query: 310 GALETLCGQAYGAQLYRML------GLYLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQE 471 A+ + Q GA+ + + GLY+ +L +L + Sbjct: 69 MAITPIIAQLIGAKKEKQVKNTVHNGLYIALFLAFILILIN-----FLVVPTILTHMPVT 123 Query: 472 PEVSRAAAVFIRYQIPGLFAFSFLQCLLR 558 EV+ A F+ G+ AF F+ +LR Sbjct: 124 AEVAHIARHFLNGICIGIPAF-FISAILR 151
>NORM_LISMO (Q8Y654) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 456 Score = 38.1 bits (87), Expect = 0.020 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%) Frame = +1 Query: 136 WMQ-LQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS-WATVTGYAFVTGMS 309 W Q L P+V+T ++ +S+ SG+ N LAG +G+S WA V A +G+ Sbjct: 11 WKQFLTIFTPIVITQLTLFSMTFFDTTMSGNYSNQALAGVAIGSSFWAPVN--AAFSGLL 68 Query: 310 GALETLCGQAYGAQLYRML------GLYL 378 A+ + Q GA+ + + GLY+ Sbjct: 69 MAITPIIAQLIGAKKEKQVKNTVHNGLYI 97
>NORM_LISMF (Q71YH0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 456 Score = 38.1 bits (87), Expect = 0.020 Identities = 27/89 (30%), Positives = 44/89 (49%), Gaps = 8/89 (8%) Frame = +1 Query: 136 WMQ-LQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS-WATVTGYAFVTGMS 309 W Q L P+V+T ++ +S+ SG+ N LAG +G+S WA V A +G+ Sbjct: 11 WKQFLTIFTPIVITQLTLFSMTFFDTTMSGNYSNQALAGVAIGSSFWAPVN--AAFSGLL 68 Query: 310 GALETLCGQAYGAQLYRML------GLYL 378 A+ + Q GA+ + + GLY+ Sbjct: 69 MAITPIIAQLIGAKKEKQVKNTVHNGLYI 97
>NORM_BACHK (Q6HLG9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 37.0 bits (84), Expect = 0.045 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 8/141 (5%) Frame = +1 Query: 148 QFAV---PMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS-WATVTGYAFVTGMSGA 315 QFA+ P+ +T MS +++ SGH + LAG +G S W V+ +TG+ A Sbjct: 13 QFALLFFPIFVTQMSLFAMSFFDTTMSGHASPIDLAGVAIGTSIWIPVS--TGLTGILMA 70 Query: 316 LETLCGQAYGAQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFT-EPLLLCLHQEPEVSRAA 492 + Q G++ + + + LFT P+L + E V R A Sbjct: 71 TTPIVAQLVGSKKKEDVPHVVIQAVYLAICASFVVILIGLFTVTPILNGMRLEEPVERIA 130 Query: 493 AVF---IRYQIPGLFAFSFLQ 546 A F I I LF ++ L+ Sbjct: 131 AQFLSIIAIGIIPLFTYTVLR 151
>NORM_BACCZ (Q63DZ4) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 37.0 bits (84), Expect = 0.045 Identities = 38/141 (26%), Positives = 60/141 (42%), Gaps = 8/141 (5%) Frame = +1 Query: 148 QFAV---PMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS-WATVTGYAFVTGMSGA 315 QFA+ P+ +T MS +++ SGH + LAG +G S W V+ +TG+ A Sbjct: 13 QFALLFFPIFVTQMSLFAMSFFDTTMSGHASPIDLAGVAIGTSIWIPVS--TGLTGILMA 70 Query: 316 LETLCGQAYGAQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFT-EPLLLCLHQEPEVSRAA 492 + Q G++ + + + LFT P+L + E V R A Sbjct: 71 TTPIVAQLVGSKKKEDVPHVVIQAVYLAICASFVVILIGLFTVTPILNGMRLEEPVERIA 130 Query: 493 AVF---IRYQIPGLFAFSFLQ 546 A F I I LF ++ L+ Sbjct: 131 AQFLSIIAIGIIPLFTYTVLR 151
>NORM_BACAN (Q81T85) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 36.6 bits (83), Expect = 0.059 Identities = 35/134 (26%), Positives = 56/134 (41%), Gaps = 5/134 (3%) Frame = +1 Query: 160 PMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS-WATVTGYAFVTGMSGALETLCGQ 336 P+ +T MS +++ SGH + LAG +G S W V+ +TG+ A + Q Sbjct: 20 PIFVTQMSLFAMSFFDTTMSGHASPIDLAGVAIGTSIWIPVS--TGLTGILMATTPIVAQ 77 Query: 337 AYGAQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFT-EPLLLCLHQEPEVSRAAAVF---I 504 G++ + + + LFT P+L + E V R AA F I Sbjct: 78 LVGSKKKEDVPHVIIQAVYLAICASFVVILIGLFTVTPILNGMRLEEPVERIAAQFLSII 137 Query: 505 RYQIPGLFAFSFLQ 546 I LF ++ L+ Sbjct: 138 AIGIIPLFTYTVLR 151
>DINF_ECOLI (P28303) DNA-damage-inducible protein F| Length = 459 Score = 35.0 bits (79), Expect = 0.17 Identities = 24/69 (34%), Positives = 38/69 (55%), Gaps = 3/69 (4%) Frame = +1 Query: 154 AVPMVLTNMSYYSIPLVSVMFSGHLGN-VHLAGATLGNSWATVTGYAFVTGMSGALET-- 324 A+PM+ +N++ + LV GHL + V+L G +G AT T + F+ + + T Sbjct: 33 ALPMIFSNITVPLLGLVDTAVIGHLDSPVYLGGVAVG---ATATSFLFMLLLFLRMSTTG 89 Query: 325 LCGQAYGAQ 351 L QAYGA+ Sbjct: 90 LTAQAYGAK 98
>NORM_XANAC (Q8PG07) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 458 Score = 34.7 bits (78), Expect = 0.23 Identities = 36/139 (25%), Positives = 53/139 (38%), Gaps = 2/139 (1%) Frame = +1 Query: 154 AVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS--WATVTGYAFVTGMSGALETL 327 A+P+VL ++S I V + +GH G LA T+G S W + G +L Sbjct: 25 ALPLVLGHVSTGLIGFVDNVIAGHHGTATLAAVTIGTSLLWLPM---LVPIGTLISLTAS 81 Query: 328 CGQAYGAQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQEPEVSRAAAVFIR 507 Q GA R +G + PLL P++ A F+ Sbjct: 82 VSQLLGAGREREIGPLFRQALWLSLGLSALMFVFLSVVPPLLPTFGIAPDIVPGATAFLH 141 Query: 508 YQIPGLFAFSFLQCLLRYL 564 G+ A +F C +RYL Sbjct: 142 AVRWGVPALTFYFC-MRYL 159
>NORM_BURVI (Q9F5N7) Multidrug resistance protein norM (Multidrug-efflux| transporter) Length = 462 Score = 34.3 bits (77), Expect = 0.29 Identities = 37/157 (23%), Positives = 65/157 (41%), Gaps = 4/157 (2%) Frame = +1 Query: 97 PAWSGRLIDTEEAWMQLQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWAT 276 P+ S +DT + A P+ + +S ++ + + G LG LA LG ++ Sbjct: 14 PSLSRHAVDTA------RLAAPLAIAQLSQMAMSVTDTVLLGSLGPDSLAAGGLGANFF- 66 Query: 277 VTGYAFVTGMSGALETLC---GQAYGAQL-YRMLGLYLQXXXXXXXXXXXXXXXLWLFTE 444 + VT + G L ++ A GAQ +R+ +Y L L +E Sbjct: 67 ---FVIVTVLQGVLSSVSVSVAHARGAQAEHRVPHIYWTGFVLSVLLAIPAVVALSL-SE 122 Query: 445 PLLLCLHQEPEVSRAAAVFIRYQIPGLFAFSFLQCLL 555 PLLL H+ P +++ + G+ F+ L L+ Sbjct: 123 PLLLMFHEPPTLAQHVG-----EYTGILRFAALGSLI 154
>NORM_BACC1 (Q73BB8) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 454 Score = 33.9 bits (76), Expect = 0.38 Identities = 18/54 (33%), Positives = 28/54 (51%), Gaps = 1/54 (1%) Frame = +1 Query: 160 PMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS-WATVTGYAFVTGMSGAL 318 P+ +T MS +++ SGH + LAG +G S W V+ TG++G L Sbjct: 20 PIFITQMSLFAMSFFDTTMSGHASPIDLAGVAIGTSIWIPVS-----TGLTGIL 68
>NORM_RHIME (Q92PZ0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 467 Score = 33.5 bits (75), Expect = 0.50 Identities = 35/161 (21%), Positives = 61/161 (37%), Gaps = 11/161 (6%) Frame = +1 Query: 115 LIDTEEAW-----MQLQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWATV 279 L ++ +W L VP + ++ +I V+ G LG LA L Sbjct: 10 LAQSDNSWPTHFRASLYLGVPFIGAQLAQLAINTTDVLMVGQLGATQLAAIILATQ-VFF 68 Query: 280 TGYAFVTGMSGALETLCGQAYG------AQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFT 441 T + F +G + A+ + QA G + +G+++ LW+ Sbjct: 69 TIFIFGSGFANAVVPMVAQAQGRGDQVSVRRSVRMGMWV-----VLLYGVLTAPVLWM-A 122 Query: 442 EPLLLCLHQEPEVSRAAAVFIRYQIPGLFAFSFLQCLLRYL 564 EP+LL Q+PEV+ A ++ +F L +L Sbjct: 123 EPILLFAGQKPEVAALAGEYLHIAQWAIFPSLIFMVLRAFL 163
>NORM_XYLFT (Q879Z5) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 469 Score = 33.1 bits (74), Expect = 0.66 Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 2/138 (1%) Frame = +1 Query: 145 LQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS--WATVTGYAFVTGMSGAL 318 L A+P+VL ++S I V + +GH V LA +T+G + W + G +L Sbjct: 34 LLLALPLVLGHVSTGLIGFVLNVIAGHHSTVTLAASTIGTALLWLPM---LVPMGTLISL 90 Query: 319 ETLCGQAYGAQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQEPEVSRAAAV 498 L Q +GA+ R +G + LL P++ AA Sbjct: 91 TVLVSQLHGAERERDIGPLFRQALWLAMLLGLVMFTFLSVVPALLPLFGIVPDIVPGAAK 150 Query: 499 FIRYQIPGLFAFSFLQCL 552 F+ G AF C+ Sbjct: 151 FLHVVRWGSLAFPLYFCM 168
>NORM_XYLFA (Q9PA34) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 469 Score = 33.1 bits (74), Expect = 0.66 Identities = 34/138 (24%), Positives = 53/138 (38%), Gaps = 2/138 (1%) Frame = +1 Query: 145 LQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS--WATVTGYAFVTGMSGAL 318 L A+P+VL ++S I V + +GH V LA +T+G + W + G +L Sbjct: 34 LLLALPLVLGHVSTGLIGFVLNVIAGHHSTVTLAASTIGTALLWLPM---LVPMGTLISL 90 Query: 319 ETLCGQAYGAQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQEPEVSRAAAV 498 L Q +GA+ R +G + LL P++ AA Sbjct: 91 TVLVSQLHGAERERDIGPLFRQALWLAMLLGLVMFTFLSVVPALLPLFGIVPDIVPGAAK 150 Query: 499 FIRYQIPGLFAFSFLQCL 552 F+ G AF C+ Sbjct: 151 FLHVVRWGSLAFPLYFCM 168
>NORM_PSEPK (Q88CB9) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 462 Score = 33.1 bits (74), Expect = 0.66 Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 13/154 (8%) Frame = +1 Query: 124 TEEAWMQLQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWATVTGYAFVT- 300 T E L+ A P++ + +++ + L + + LAG LG Y+FV+ Sbjct: 6 TTELKALLRLAGPLIASQLAHMLMVLTDTLMMARISPQALAGGGLG-----AASYSFVSI 60 Query: 301 ---GMSGALETL------CGQAYGAQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFTEPLL 453 G+ A+ TL GA GL+L LW EP+L Sbjct: 61 FCLGVIAAVGTLVAIRKGANDIEGATRLAQNGLWL-----AWALALFAALVLWNL-EPVL 114 Query: 454 LCLHQEPEVSRAAAVFIR---YQIPGLFAFSFLQ 546 L Q+PE +AA F+ +PG F L+ Sbjct: 115 LLFGQKPENVASAAEFLTLLPLALPGYLTFMALR 148
>PMPM_PSEAE (Q9I3Y3) Multidrug resistance protein pmpM (H(+)/drug antiporter)| (Multidrug-efflux transporter) Length = 477 Score = 33.1 bits (74), Expect = 0.66 Identities = 31/140 (22%), Positives = 55/140 (39%), Gaps = 5/140 (3%) Frame = +1 Query: 145 LQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS-WATVTGYAFVTGMSGALE 321 L A P+++ ++ ++ V + +G LA LGNS W + + +TG A Sbjct: 22 LTLAAPIMIAQLATTAMGFVDAVMAGRASPHDLAAVALGNSIWIPM--FLLMTGTLLATT 79 Query: 322 TLCGQAYGAQLYRMLG-LYLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQEPEVSRAAAV 498 Q +GA G L Q LW +EP+L + PE+ + + Sbjct: 80 AKVAQRHGAGDQPGTGPLVRQALWLALLIGPLSGAVLWWLSEPILGLMKVRPELIGPSLL 139 Query: 499 FIR---YQIPGLFAFSFLQC 549 +++ P + L+C Sbjct: 140 YLKGIALGFPAAALYHVLRC 159
>NORM_PHOLL (Q7N1G0) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 453 Score = 32.3 bits (72), Expect = 1.1 Identities = 14/48 (29%), Positives = 28/48 (58%), Gaps = 4/48 (8%) Frame = +1 Query: 136 WMQLQ----FAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS 267 W +L+ F+ P++++ ++ ++ V ++ SGH LA TLG+S Sbjct: 7 WRELKQLLFFSFPIIVSQIARTAMSFVDIVMSGHYATADLAAVTLGSS 54
>NORM_BRUSU (Q8G2I1) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 471 Score = 31.6 bits (70), Expect = 1.9 Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 3/128 (2%) Frame = +1 Query: 130 EAWMQLQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWATVTGYAFVTGMS 309 E + L+ P++ TN+S ++ V+F G LG LA A L S+ T F G+ Sbjct: 23 EMVVALKLGWPLIFTNLSQAALTATDVIFIGRLGADTLASALLATSFYH-TLMIFSMGLV 81 Query: 310 GALETLCGQAYGAQLYRMLGL---YLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQEPEV 480 A+ + A G + + + Q LW E + L L Q P++ Sbjct: 82 SAVMPMIAIALGKNRHSVRDVRRTVRQGFWSAIMIVIPLWVVLW-HCEEIFLFLGQRPDI 140 Query: 481 SRAAAVFI 504 + + F+ Sbjct: 141 AARSTDFM 148
>NORM_BRUME (Q8YFD7) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 471 Score = 31.6 bits (70), Expect = 1.9 Identities = 31/128 (24%), Positives = 52/128 (40%), Gaps = 3/128 (2%) Frame = +1 Query: 130 EAWMQLQFAVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNSWATVTGYAFVTGMS 309 E + L+ P++ TN+S ++ V+F G LG LA A L S+ T F G+ Sbjct: 23 EMVVALKLGWPLIFTNLSQAALTATDVIFIGRLGADTLASALLATSFYH-TLMIFSMGLV 81 Query: 310 GALETLCGQAYGAQLYRMLGL---YLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQEPEV 480 A+ + A G + + + Q LW E + L L Q P++ Sbjct: 82 SAVMPMIAIALGKNRHSVRDVRRTVRQGFWSAIMIVIPLWVVLW-HCEEIFLFLGQRPDI 140 Query: 481 SRAAAVFI 504 + + F+ Sbjct: 141 AARSTDFM 148
>NORM_XANCP (Q8P4E6) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 458 Score = 31.2 bits (69), Expect = 2.5 Identities = 36/139 (25%), Positives = 52/139 (37%), Gaps = 2/139 (1%) Frame = +1 Query: 154 AVPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS--WATVTGYAFVTGMSGALETL 327 A+P+VL ++S I V + +GH G LA T+G S W + G +L Sbjct: 25 ALPLVLGHVSTGLIGFVDNVIAGHHGTATLAAVTIGTSLLWLPM---LVPIGTLISLTAS 81 Query: 328 CGQAYGAQLYRMLGLYLQXXXXXXXXXXXXXXXLWLFTEPLLLCLHQEPEVSRAAAVFIR 507 Q GA R +G + PLL P++ A F+ Sbjct: 82 VSQLVGAGREREIGPLFRQALWLSLGLGALMFGFLTAVPPLLPTFGIAPDIVPGATDFLH 141 Query: 508 YQIPGLFAFSFLQCLLRYL 564 G A +F C +RYL Sbjct: 142 AVRWGGPALTFYFC-MRYL 159
>NORM_GEOKA (Q5KZL2) Probable multidrug resistance protein norM| (Multidrug-efflux transporter) Length = 455 Score = 30.8 bits (68), Expect = 3.3 Identities = 19/65 (29%), Positives = 31/65 (47%), Gaps = 1/65 (1%) Frame = +1 Query: 157 VPMVLTNMSYYSIPLVSVMFSGHLGNVHLAGATLGNS-WATVTGYAFVTGMSGALETLCG 333 +P+ ++ Y++ V V SGH LAG +G+S W V + G+ AL + Sbjct: 19 LPIFVSQTGQYAMNFVDVAMSGHASAEDLAGVAIGSSLWVPV--FTGAGGILLALSPIVS 76 Query: 334 QAYGA 348 +GA Sbjct: 77 HHFGA 81
>NUDH_RALEJ (Q46X20) Probable (di)nucleoside polyphosphate hydrolase (EC| 3.6.1.-) Length = 231 Score = 30.4 bits (67), Expect = 4.2 Identities = 18/53 (33%), Positives = 22/53 (41%) Frame = -2 Query: 377 RYSPSMRYSWAP*ACPHSVSRAPLIPVTKA*PVTVAQELPSVAPARWTLPRWP 219 R+ RY+ P P R PL PVT+ PV A E + LP P Sbjct: 172 RHGSGQRYAQQPGQPPTLAQRRPLQPVTQVAPVAPAAEAVQAVESDAVLPATP 224
>CARA_LACPL (P77885) Carbamoyl-phosphate synthase pyrimidine-specific small| chain (EC 6.3.5.5) (Carbamoyl-phosphate synthetase glutamine chain) (CPS-P) Length = 364 Score = 30.4 bits (67), Expect = 4.2 Identities = 17/47 (36%), Positives = 25/47 (53%), Gaps = 4/47 (8%) Frame = +1 Query: 247 GATLGNSWATVTGYAFVTGMSGALETLCGQAYGAQL----YRMLGLY 375 G G + ATV F TGMSG E++ Q+Y ++ Y ++G Y Sbjct: 15 GTGFGATTATVGELVFNTGMSGYQESITDQSYNGEILMFTYPLIGNY 61
>MACF4_HUMAN (Q96PK2) Microtubule-actin crosslinking factor 1, isoform 4| Length = 5938 Score = 30.0 bits (66), Expect = 5.6 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = -2 Query: 131 SSVSIKRPDHAGEQGLASPSLPSAGSQVVPSSG 33 SS S + +H+ +SP+ P++G++V+PSSG Sbjct: 5784 SSSSASQSNHSCTSMPSSPATPASGTKVIPSSG 5816
>MACF1_HUMAN (Q9UPN3) Microtubule-actin crosslinking factor 1, isoforms 1/2/3/5| (Actin cross-linking family protein 7) (Macrophin-1) (Trabeculin-alpha) (620 kDa actin-binding protein) (ABP620) Length = 5430 Score = 30.0 bits (66), Expect = 5.6 Identities = 13/33 (39%), Positives = 23/33 (69%) Frame = -2 Query: 131 SSVSIKRPDHAGEQGLASPSLPSAGSQVVPSSG 33 SS S + +H+ +SP+ P++G++V+PSSG Sbjct: 5276 SSSSASQSNHSCTSMPSSPATPASGTKVIPSSG 5308
>HOXV_RALEU (P31914) Hydrogenase expression/formation protein hoxV| Length = 383 Score = 29.6 bits (65), Expect = 7.2 Identities = 23/65 (35%), Positives = 29/65 (44%), Gaps = 6/65 (9%) Frame = +1 Query: 4 LAQRAAMSSTPLLGTTC-----EPADGKDGEAR-PCSPAWSGRLIDTEEAWMQLQFAVPM 165 +AQ A PLL E A GEA PC P+W GR+ +T +W +L A Sbjct: 185 VAQAMASMPAPLLPHASTDALRELAQSLAGEADFPCRPSWQGRVFET-GSWTRLGLADCS 243 Query: 166 VLTNM 180 NM Sbjct: 244 AFGNM 248
>GLGB2_XANOR (Q5H6Q3) 1,4-alpha-glucan branching enzyme 2 (EC 2.4.1.18)| (Glycogen branching enzyme 2) (BE 2) (1,4-alpha-D-glucan:1,4-alpha-D-glucan 6-glucosyl-transferase 2) Length = 720 Score = 29.3 bits (64), Expect = 9.5 Identities = 19/52 (36%), Positives = 24/52 (46%), Gaps = 3/52 (5%) Frame = -1 Query: 594 DERHDDGLRLQVPQKALKEGEGEQAGDLVPNEHRGGAGHL---GFLMQAQKQ 448 D H DGLR+ L G G+ VPN H GG +L FL Q ++ Sbjct: 388 DHYHLDGLRVDAVASMLYRDYGRAEGEWVPNAH-GGRENLEAVAFLRQLNRE 438 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 63,721,759 Number of Sequences: 219361 Number of extensions: 1055718 Number of successful extensions: 4309 Number of sequences better than 10.0: 34 Number of HSP's better than 10.0 without gapping: 4066 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4302 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5481822624 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
