ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal33i03 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT009218.1| Triticum aestivum clone wle1n.pk0060.c11:fis, full insert mRNA sequence Length = 1940 Score = 444 bits (224), Expect = e-121 Identities = 446/520 (85%) Strand = Plus / Plus Query: 92 gctcgccggcgtggtcaggccgcttgatcgacacggaagaggcatggatgcagctgcagt 151 |||||||||||||| ||| | ||||||||||||| ||||| ||| |||||| |||| Sbjct: 138 gctcgccggcgtggctgcgcctcctgatcgacacggaggaggcctgggcgcagctacagt 197 Query: 152 tcgctgtgccgatggtcctgaccaacatgtcctactacagcatcccgctggtgtccgtga 211 |||| |||||||||||||||||||||||||||||||| |||||||||||||||||||| Sbjct: 198 tcgcgctgccgatggtcctgaccaacatgtcctactacgccatcccgctggtgtccgtga 257 Query: 212 tgttctccggccacctcggcaacgtccacctcgccggcgccacgctcggcaactcctggg 271 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||| Sbjct: 258 tgttctccggccacctcggcaacgtccacctcgccggcgccaccctcggcaactcctggg 317 Query: 272 ccaccgtcaccggctacgccttcgtcaccggtatgagcggcgccctggagacgctatgcg 331 ||||||||||||||||||||||||| ||||| |||||||||||| ||||||| || || | Sbjct: 318 ccaccgtcaccggctacgccttcgttaccggcatgagcggcgccatggagacactgtgtg 377 Query: 332 ggcaggcctacggcgcccaactataccgcatgctaggactgtacctgcagtcgtcagtca 391 | |||||||||||||||| | |||||| |||| || |||||||||| ||||| ||| Sbjct: 378 gacaggcctacggcgcccggatgtaccgcctgctgggcttgtacctgcaatcgtcgctca 437 Query: 392 tcatgtcggcggcggtgtccgtggtcatcgccgtcctgtggctgttcacggagccgctgc 451 ||||||| ||| ||||||||| ||||| ||||| |||||||||||||||||||| | | Sbjct: 438 tcatgtcagcgatggtgtccgtactcatctccgtcgtgtggctgttcacggagccgatcc 497 Query: 452 ttctgtgcctgcatcaggaacccgaggtgtcccgcgccgccgcggtgttcattcggtacc 511 | ||| ||||||||||||||||||||||||| || || | |||||||| || |||| Sbjct: 498 tgttgtctctgcatcaggaacccgaggtgtcccatgctgcaacagtgttcatccgatacc 557 Query: 512 agatccccggcctgttcgccttctccttccttcagtgccttctgcggtacctgcagacgc 571 |||||||||| |||| |||| |||||||| || ||||| || ||||| |||||||| | Sbjct: 558 agatccccggtttgtttgcctattccttcctgcaatgcctgctacggtatctgcagacac 617 Query: 572 agtccgtcgtcatgccgctcgtcgtctgctccgtggtgcc 611 ||||| | ||| | || || || ||||||||| ||||||| Sbjct: 618 agtccattgtcgtaccacttgttgtctgctccatggtgcc 657
>ref|XM_478265.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1449 Score = 327 bits (165), Expect = 2e-86 Identities = 261/293 (89%) Strand = Plus / Plus Query: 121 gacacggaagaggcatggatgcagctgcagttcgctgtgccgatggtcctgaccaacatg 180 |||||||| ||||| ||| |||| || |||||| ||||||||||| || ||||||||| Sbjct: 97 gacacggaggaggcgtgggcgcagacgcggttcgcggtgccgatggtgctcaccaacatg 156 Query: 181 tcctactacagcatcccgctggtgtccgtgatgttctccggccacctcggcaacgtccac 240 ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 157 tcctactacgccatcccgctggtgtccgtcatgttctccggccacctcggcgacgtccac 216 Query: 241 ctcgccggcgccacgctcggcaactcctgggccaccgtcaccggctacgccttcgtcacc 300 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 217 ctcgccggcgccacgctcggcaactcgtgggccaccgtcaccggctacgccttcgtcacg 276 Query: 301 ggtatgagcggcgccctggagacgctatgcgggcaggcctacggcgcccaactataccgc 360 || |||||||| |||||||||||||| ||||||||||| |||||||| | | |||||| Sbjct: 277 ggcatgagcggggccctggagacgctgtgcgggcaggcgtacggcgcgcggatgtaccgc 336 Query: 361 atgctaggactgtacctgcagtcgtcagtcatcatgtcggcggcggtgtccgt 413 ||||| || || |||||||||||||| | |||||||||||||||||||||| Sbjct: 337 atgctgggcctctacctgcagtcgtcgctgctcatgtcggcggcggtgtccgt 389 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 526 ttcgccttctccttccttcagtgccttctgcggtacctgcagacgcagtccgtcgtcatg 585 ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| | Sbjct: 502 ttcgccttctccttcctccagtgcctcctccggtacctgcagacgcagtccgtcgtcgcg 561 Query: 586 ccgctcgtcgtctgctccgtggtgccg 612 |||||||||| ||||||| ||| |||| Sbjct: 562 ccgctcgtcgcctgctccctggcgccg 588
>dbj|AK120682.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013163C05, full insert sequence Length = 1623 Score = 327 bits (165), Expect = 2e-86 Identities = 261/293 (89%) Strand = Plus / Plus Query: 121 gacacggaagaggcatggatgcagctgcagttcgctgtgccgatggtcctgaccaacatg 180 |||||||| ||||| ||| |||| || |||||| ||||||||||| || ||||||||| Sbjct: 193 gacacggaggaggcgtgggcgcagacgcggttcgcggtgccgatggtgctcaccaacatg 252 Query: 181 tcctactacagcatcccgctggtgtccgtgatgttctccggccacctcggcaacgtccac 240 ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 253 tcctactacgccatcccgctggtgtccgtcatgttctccggccacctcggcgacgtccac 312 Query: 241 ctcgccggcgccacgctcggcaactcctgggccaccgtcaccggctacgccttcgtcacc 300 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| Sbjct: 313 ctcgccggcgccacgctcggcaactcgtgggccaccgtcaccggctacgccttcgtcacg 372 Query: 301 ggtatgagcggcgccctggagacgctatgcgggcaggcctacggcgcccaactataccgc 360 || |||||||| |||||||||||||| ||||||||||| |||||||| | | |||||| Sbjct: 373 ggcatgagcggggccctggagacgctgtgcgggcaggcgtacggcgcgcggatgtaccgc 432 Query: 361 atgctaggactgtacctgcagtcgtcagtcatcatgtcggcggcggtgtccgt 413 ||||| || || |||||||||||||| | |||||||||||||||||||||| Sbjct: 433 atgctgggcctctacctgcagtcgtcgctgctcatgtcggcggcggtgtccgt 485 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Plus Query: 526 ttcgccttctccttccttcagtgccttctgcggtacctgcagacgcagtccgtcgtcatg 585 ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| | Sbjct: 598 ttcgccttctccttcctccagtgcctcctccggtacctgcagacgcagtccgtcgtcgcg 657 Query: 586 ccgctcgtcgtctgctccgtggtgccg 612 |||||||||| ||||||| ||| |||| Sbjct: 658 ccgctcgtcgcctgctccctggcgccg 684
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 232 bits (117), Expect = 1e-57 Identities = 162/177 (91%) Strand = Plus / Minus Query: 121 gacacggaagaggcatggatgcagctgcagttcgctgtgccgatggtcctgaccaacatg 180 |||||||| ||||| ||| |||| || |||||| ||||||||||| || ||||||||| Sbjct: 18909251 gacacggaggaggcgtgggcgcagacgcggttcgcggtgccgatggtgctcaccaacatg 18909192 Query: 181 tcctactacagcatcccgctggtgtccgtgatgttctccggccacctcggcaacgtccac 240 ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 18909191 tcctactacgccatcccgctggtgtccgtcatgttctccggccacctcggcgacgtccac 18909132 Query: 241 ctcgccggcgccacgctcggcaactcctgggccaccgtcaccggctacgccttcgtc 297 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 18909131 ctcgccggcgccacgctcggcaactcgtgggccaccgtcaccggctacgccttcgtc 18909075 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 526 ttcgccttctccttccttcagtgccttctgcggtacctgcagacgcagtccgtcgtcatg 585 ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| | Sbjct: 18904653 ttcgccttctccttcctccagtgcctcctccggtacctgcagacgcagtccgtcgtcgcg 18904594 Query: 586 ccgctcgtcgtctgctccgtggtgccg 612 |||||||||| ||||||| ||| |||| Sbjct: 18904593 ccgctcgtcgcctgctccctggcgccg 18904567 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Minus Query: 304 atgagcggcgccctggagacgctatgcgggcaggcctacggcgcccaactataccgcatg 363 |||||||| |||||||||||||| ||||||||||| |||||||| | | ||||||||| Sbjct: 18904875 atgagcggggccctggagacgctgtgcgggcaggcgtacggcgcgcggatgtaccgcatg 18904816 Query: 364 ctaggactgtacctgcagtcgtcagtcatcatgtcggcggcggtgtccgt 413 || || || |||||||||||||| | |||||||||||||||||||||| Sbjct: 18904815 ctgggcctctacctgcagtcgtcgctgctcatgtcggcggcggtgtccgt 18904766 Score = 95.6 bits (48), Expect = 2e-16 Identities = 120/144 (83%) Strand = Plus / Minus Query: 141 gcagctgcagttcgctgtgccgatggtcctgaccaacatgtcctactacagcatcccgct 200 ||||||| |||||| | ||||||||| ||||| |||| |||||||| ||||||||| Sbjct: 443708 gcagctggcgttcgcggcgccgatggtggcgaccagcatggcctactacgccatcccgct 443649 Query: 201 ggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcgg 260 ||| ||||| |||| | |||||| |||||| | || | |||||||||||||| ||||| Sbjct: 443648 ggtctccgtcatgtacgccggccgcctcggagagctcgagctcgccggcgccaccctcgg 443589 Query: 261 caactcctgggccaccgtcaccgg 284 ||||||||||| |||||||||||| Sbjct: 443588 caactcctggggcaccgtcaccgg 443565 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 317 tggagacgctatgcgggcaggcctacggcgcc 348 |||||||||| ||||||||||| ||||||||| Sbjct: 19858314 tggagacgctgtgcgggcaggcgtacggcgcc 19858345
>dbj|AP005186.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0430F03 Length = 183095 Score = 232 bits (117), Expect = 1e-57 Identities = 162/177 (91%) Strand = Plus / Minus Query: 121 gacacggaagaggcatggatgcagctgcagttcgctgtgccgatggtcctgaccaacatg 180 |||||||| ||||| ||| |||| || |||||| ||||||||||| || ||||||||| Sbjct: 11236 gacacggaggaggcgtgggcgcagacgcggttcgcggtgccgatggtgctcaccaacatg 11177 Query: 181 tcctactacagcatcccgctggtgtccgtgatgttctccggccacctcggcaacgtccac 240 ||||||||| |||||||||||||||||| ||||||||||||||||||||| |||||||| Sbjct: 11176 tcctactacgccatcccgctggtgtccgtcatgttctccggccacctcggcgacgtccac 11117 Query: 241 ctcgccggcgccacgctcggcaactcctgggccaccgtcaccggctacgccttcgtc 297 |||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 11116 ctcgccggcgccacgctcggcaactcgtgggccaccgtcaccggctacgccttcgtc 11060 Score = 109 bits (55), Expect = 1e-20 Identities = 79/87 (90%) Strand = Plus / Minus Query: 526 ttcgccttctccttccttcagtgccttctgcggtacctgcagacgcagtccgtcgtcatg 585 ||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| | Sbjct: 6638 ttcgccttctccttcctccagtgcctcctccggtacctgcagacgcagtccgtcgtcgcg 6579 Query: 586 ccgctcgtcgtctgctccgtggtgccg 612 |||||||||| ||||||| ||| |||| Sbjct: 6578 ccgctcgtcgcctgctccctggcgccg 6552 Score = 99.6 bits (50), Expect = 1e-17 Identities = 95/110 (86%) Strand = Plus / Minus Query: 304 atgagcggcgccctggagacgctatgcgggcaggcctacggcgcccaactataccgcatg 363 |||||||| |||||||||||||| ||||||||||| |||||||| | | ||||||||| Sbjct: 6860 atgagcggggccctggagacgctgtgcgggcaggcgtacggcgcgcggatgtaccgcatg 6801 Query: 364 ctaggactgtacctgcagtcgtcagtcatcatgtcggcggcggtgtccgt 413 || || || |||||||||||||| | |||||||||||||||||||||| Sbjct: 6800 ctgggcctctacctgcagtcgtcgctgctcatgtcggcggcggtgtccgt 6751
>gb|AY019975.1| Oryza sativa microsatellite MRG2300 containing (CT)X14, genomic sequence Length = 228 Score = 157 bits (79), Expect = 5e-35 Identities = 85/87 (97%) Strand = Plus / Plus Query: 211 atgttctccggccacctcggcaacgtccacctcgccggcgccacgctcggcaactcctgg 270 ||||||||||||||||||||| |||||||||||||||||||||||||||||||||| ||| Sbjct: 4 atgttctccggccacctcggcgacgtccacctcgccggcgccacgctcggcaactcgtgg 63 Query: 271 gccaccgtcaccggctacgccttcgtc 297 ||||||||||||||||||||||||||| Sbjct: 64 gccaccgtcaccggctacgccttcgtc 90
>ref|NM_186151.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1707 Score = 95.6 bits (48), Expect = 2e-16 Identities = 120/144 (83%) Strand = Plus / Plus Query: 141 gcagctgcagttcgctgtgccgatggtcctgaccaacatgtcctactacagcatcccgct 200 ||||||| |||||| | ||||||||| ||||| |||| |||||||| ||||||||| Sbjct: 294 gcagctggcgttcgcggcgccgatggtggcgaccagcatggcctactacgccatcccgct 353 Query: 201 ggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcgg 260 ||| ||||| |||| | |||||| |||||| | || | |||||||||||||| ||||| Sbjct: 354 ggtctccgtcatgtacgccggccgcctcggagagctcgagctcgccggcgccaccctcgg 413 Query: 261 caactcctgggccaccgtcaccgg 284 ||||||||||| |||||||||||| Sbjct: 414 caactcctggggcaccgtcaccgg 437
>dbj|AP004342.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0585H11 Length = 149371 Score = 95.6 bits (48), Expect = 2e-16 Identities = 120/144 (83%) Strand = Plus / Minus Query: 141 gcagctgcagttcgctgtgccgatggtcctgaccaacatgtcctactacagcatcccgct 200 ||||||| |||||| | ||||||||| ||||| |||| |||||||| ||||||||| Sbjct: 45872 gcagctggcgttcgcggcgccgatggtggcgaccagcatggcctactacgccatcccgct 45813 Query: 201 ggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcgg 260 ||| ||||| |||| | |||||| |||||| | || | |||||||||||||| ||||| Sbjct: 45812 ggtctccgtcatgtacgccggccgcctcggagagctcgagctcgccggcgccaccctcgg 45753 Query: 261 caactcctgggccaccgtcaccgg 284 ||||||||||| |||||||||||| Sbjct: 45752 caactcctggggcaccgtcaccgg 45729
>ref|NM_195893.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBa0045C13.2), mRNA Length = 1434 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| ||||||||||||| | ||| ||||||||||||| | |||| Sbjct: 152 tggtgtccgtcatgttcgtcggccacctcggcgagctccccctcgccggcgcctccctcg 211 Query: 260 gcaactcctgggccaccgtcaccggct 286 || |||| |||| ||||||||||| Sbjct: 212 ccacctccctcgccaacgtcaccggct 238 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 263 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 299
>gb|AC090441.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBb0052C09, complete sequence Length = 139468 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| ||||||||||||| | ||| ||||||||||||| | |||| Sbjct: 130667 tggtgtccgtcatgttcgtcggccacctcggcgagctccccctcgccggcgcctccctcg 130726 Query: 260 gcaactcctgggccaccgtcaccggct 286 || |||| |||| ||||||||||| Sbjct: 130727 ccacctccctcgccaacgtcaccggct 130753 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Minus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggc 249 |||||||||| |||||| ||||||||||||| | |||| ||||||||| Sbjct: 71458 tggtgtccgtcatgttcgtcggccacctcggcgagctccagctcgccggc 71409 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 130887 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 130923 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccgg 248 |||||||||| |||||| ||||||||||||| | |||| |||||||| Sbjct: 89708 tggtgtccgtcatgttcgtcggccacctcggcgagctccagctcgccgg 89660 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 89494 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 89458 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 71241 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 71205
>gb|AC079634.3|AC079634 Genomic Sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0045C13, from Chromosome 10, complete sequence Length = 161250 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| ||||||||||||| | ||| ||||||||||||| | |||| Sbjct: 10621 tggtgtccgtcatgttcgtcggccacctcggcgagctccccctcgccggcgcctccctcg 10680 Query: 260 gcaactcctgggccaccgtcaccggct 286 || |||| |||| ||||||||||| Sbjct: 10681 ccacctccctcgccaacgtcaccggct 10707 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| |||||||||||| | ||| ||||||||||||| | |||| Sbjct: 21382 tggtgtccgtcatgttcgtcggccacctcggtgagctccccctcgccggcgcctccctcg 21323 Query: 260 gcaactcctgggccaccgtcaccggctac 288 || |||| |||| ||||||||||||| Sbjct: 21322 ccacctccctcgccaacgtcaccggctac 21294 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 10841 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 10877
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| ||||||||||||| | ||| ||||||||||||| | |||| Sbjct: 9778142 tggtgtccgtcatgttcgtcggccacctcggcgagctccccctcgccggcgcctccctcg 9778201 Query: 260 gcaactcctgggccaccgtcaccggct 286 || |||| |||| ||||||||||| Sbjct: 9778202 ccacctccctcgccaacgtcaccggct 9778228 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| |||||||||||| | ||| ||||||||||||| | |||| Sbjct: 9788903 tggtgtccgtcatgttcgtcggccacctcggtgagctccccctcgccggcgcctccctcg 9788844 Query: 260 gcaactcctgggccaccgtcaccggctac 288 || |||| |||| ||||||||||||| Sbjct: 9788843 ccacctccctcgccaacgtcaccggctac 9788815 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Minus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggc 249 |||||||||| |||||| ||||||||||||| | |||| ||||||||| Sbjct: 9718933 tggtgtccgtcatgttcgtcggccacctcggcgagctccagctcgccggc 9718884 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 9778362 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 9778398 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccgg 248 |||||||||| |||||| ||||||||||||| | |||| |||||||| Sbjct: 9737183 tggtgtccgtcatgttcgtcggccacctcggcgagctccagctcgccgg 9737135 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 9736969 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 9736933 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 9718716 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 9718680
>dbj|AK103119.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033119H22, full insert sequence Length = 1743 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| ||||||||||||| | ||| ||||||||||||| | |||| Sbjct: 214 tggtgtccgtcatgttcgtcggccacctcggcgagctccccctcgccggcgcctccctcg 273 Query: 260 gcaactcctgggccaccgtcaccggct 286 || |||| |||| ||||||||||| Sbjct: 274 ccacctccctcgccaacgtcaccggct 300 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 325 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 361
>dbj|AK073245.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033012J16, full insert sequence Length = 1759 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| ||||||||||||| | ||| ||||||||||||| | |||| Sbjct: 225 tggtgtccgtcatgttcgtcggccacctcggcgagctccccctcgccggcgcctccctcg 284 Query: 260 gcaactcctgggccaccgtcaccggct 286 || |||| |||| ||||||||||| Sbjct: 285 ccacctccctcgccaacgtcaccggct 311 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 336 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 372
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 54.0 bits (27), Expect = 6e-04 Identities = 72/87 (82%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| ||||||||||||| | ||| ||||||||||||| | |||| Sbjct: 9784181 tggtgtccgtcatgttcgtcggccacctcggcgagctccccctcgccggcgcctccctcg 9784240 Query: 260 gcaactcctgggccaccgtcaccggct 286 || |||| |||| ||||||||||| Sbjct: 9784241 ccacctccctcgccaacgtcaccggct 9784267 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Minus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| |||||||||||| | ||| ||||||||||||| | |||| Sbjct: 9794942 tggtgtccgtcatgttcgtcggccacctcggtgagctccccctcgccggcgcctccctcg 9794883 Query: 260 gcaactcctgggccaccgtcaccggctac 288 || |||| |||| ||||||||||||| Sbjct: 9794882 ccacctccctcgccaacgtcaccggctac 9794854 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Minus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggc 249 |||||||||| |||||| ||||||||||||| | |||| ||||||||| Sbjct: 9724972 tggtgtccgtcatgttcgtcggccacctcggcgagctccagctcgccggc 9724923 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 9784401 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 9784437 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccgg 248 |||||||||| |||||| ||||||||||||| | |||| |||||||| Sbjct: 9743222 tggtgtccgtcatgttcgtcggccacctcggcgagctccagctcgccgg 9743174 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 9743008 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 9742972 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 9724755 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 9724719
>ref|XM_462988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1913 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 ttctccggccacctcggcaacgtccacctcgccggcgccacgctcggcaa 263 ||||||||||||||||||||| || | ||||||| |||| | |||||||| Sbjct: 259 ttctccggccacctcggcaacctcgagctcgccgccgcctccctcggcaa 308 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 ||||| |||||||||| ||||||||||| Sbjct: 356 gcgccgtggagacgctgtgcgggcaggc 383
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 214 ttctccggccacctcggcaacgtccacctcgccggcgccacgctcggcaa 263 ||||||||||||||||||||| || | ||||||| |||| | |||||||| Sbjct: 20682903 ttctccggccacctcggcaacctcgagctcgccgccgcctccctcggcaa 20682854 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 317 tggagacgctatgcgggcaggcctacggcgc 347 |||||||||| ||||||||||| |||||||| Sbjct: 20604786 tggagacgctgtgcgggcaggcgtacggcgc 20604756 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||||||||| ||||||||||| | |||||| Sbjct: 4595854 gcgcgctggagacgctgtgcgggcaggcgttcggcgc 4595890 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggc 338 ||||| |||||||||| ||||||||||| Sbjct: 20679153 gcgccgtggagacgctgtgcgggcaggc 20679126
>gb|AC093312.7| Oryza sativa chromosome 3 BAC OSJNBa0095N06 genomic sequence, complete sequence Length = 152417 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 214 ttctccggccacctcggcaacgtccacctcgccggcgccacgctcggcaa 263 ||||||||||||||||||||| || | ||||||| |||| | |||||||| Sbjct: 96660 ttctccggccacctcggcaacctcgagctcgccgccgcctccctcggcaa 96611 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 317 tggagacgctatgcgggcaggcctacggcgc 347 |||||||||| ||||||||||| |||||||| Sbjct: 18543 tggagacgctgtgcgggcaggcgtacggcgc 18513 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggc 338 ||||| |||||||||| ||||||||||| Sbjct: 92910 gcgccgtggagacgctgtgcgggcaggc 92883
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Minus Query: 214 ttctccggccacctcggcaacgtccacctcgccggcgccacgctcggcaa 263 ||||||||||||||||||||| || | ||||||| |||| | |||||||| Sbjct: 20675932 ttctccggccacctcggcaacctcgagctcgccgccgcctccctcggcaa 20675883 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Minus Query: 317 tggagacgctatgcgggcaggcctacggcgc 347 |||||||||| ||||||||||| |||||||| Sbjct: 20597815 tggagacgctgtgcgggcaggcgtacggcgc 20597785 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||||||||| ||||||||||| | |||||| Sbjct: 4595969 gcgcgctggagacgctgtgcgggcaggcgttcggcgc 4596005 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggc 338 ||||| |||||||||| ||||||||||| Sbjct: 20672182 gcgccgtggagacgctgtgcgggcaggc 20672155
>dbj|AK102204.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033087G07, full insert sequence Length = 1918 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 214 ttctccggccacctcggcaacgtccacctcgccggcgccacgctcggcaa 263 ||||||||||||||||||||| || | ||||||| |||| | |||||||| Sbjct: 273 ttctccggccacctcggcaacctcgagctcgccgccgcctccctcggcaa 322 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 ||||| |||||||||| ||||||||||| Sbjct: 370 gcgccgtggagacgctgtgcgggcaggc 397
>ref|NM_195894.1| Oryza sativa (japonica cultivar-group) putative transmembrane protein (OSJNBa0045C13.3), mRNA Length = 1461 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| |||||||||||| | ||| ||||||||||||| | |||| Sbjct: 179 tggtgtccgtcatgttcgtcggccacctcggtgagctccccctcgccggcgcctccctcg 238 Query: 260 gcaactcctgggccaccgtcaccggctac 288 || |||| |||| ||||||||||||| Sbjct: 239 ccacctccctcgccaacgtcaccggctac 267
>dbj|AK069792.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023031K22, full insert sequence Length = 1903 Score = 50.1 bits (25), Expect = 0.009 Identities = 73/89 (82%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggcgccacgctcg 259 |||||||||| |||||| |||||||||||| | ||| ||||||||||||| | |||| Sbjct: 161 tggtgtccgtcatgttcgtcggccacctcggtgagctccccctcgccggcgcctccctcg 220 Query: 260 gcaactcctgggccaccgtcaccggctac 288 || |||| |||| ||||||||||||| Sbjct: 221 ccacctccctcgccaacgtcaccggctac 249
>ref|XM_483803.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1635 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||||||||||||||| ||||||||||| Sbjct: 311 gcgccctggagacgctgtgcgggcaggc 338
>ref|XM_483802.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1597 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||||||||||||||| ||||||||||| Sbjct: 162 gcgccctggagacgctgtgcgggcaggc 189
>ref|NM_187397.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1515 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 317 tggagacgctatgcgggcaggcctacggcgcc 348 |||||||||| ||||||||||| ||||||||| Sbjct: 209 tggagacgctgtgcgggcaggcgtacggcgcc 240
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||||||||||||||| ||||||||||| Sbjct: 28178314 gcgccctggagacgctgtgcgggcaggc 28178287 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgcc 348 |||| ||||||||||| ||||||||||| | ||||||| Sbjct: 23708000 gcgcgctggagacgctgtgcgggcaggcgttcggcgcc 23708037 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggca 335 |||| |||||||||||||||||||| Sbjct: 27587538 gcgcgctggagacgctatgcgggca 27587514
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 205 tccgtgatgttctccggccacctcggcaacgtccacctcgccggcgcc 252 |||||||||||| ||||||||||||| | ||| ||||||||||||| Sbjct: 17039351 tccgtgatgttcgtcggccacctcggcgagctccccctcgccggcgcc 17039398 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 205 tccgtgatgttctccggccacctcggcaacgtccacctcgccggcgcc 252 |||||||||||| ||||||||||||| | ||| ||||||||||||| Sbjct: 16976323 tccgtgatgttcgtcggccacctcggcgagctccccctcgccggcgcc 16976370
>dbj|AP006048.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1423D04 Length = 154474 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 205 tccgtgatgttctccggccacctcggcaacgtccacctcgccggcgcc 252 |||||||||||| ||||||||||||| | ||| ||||||||||||| Sbjct: 109345 tccgtgatgttcgtcggccacctcggcgagctccccctcgccggcgcc 109392
>dbj|AP005967.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:B1089G05 Length = 161420 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 205 tccgtgatgttctccggccacctcggcaacgtccacctcgccggcgcc 252 |||||||||||| ||||||||||||| | ||| ||||||||||||| Sbjct: 40203 tccgtgatgttcgtcggccacctcggcgagctccccctcgccggcgcc 40250
>dbj|AP005103.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBa0036M16 Length = 158880 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 317 tggagacgctatgcgggcaggcctacggcgcc 348 |||||||||| ||||||||||| ||||||||| Sbjct: 22964 tggagacgctgtgcgggcaggcgtacggcgcc 22995
>dbj|AP005320.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0650C03 Length = 144337 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 317 tggagacgctatgcgggcaggcctacggcgcc 348 |||||||||| ||||||||||| ||||||||| Sbjct: 98473 tggagacgctgtgcgggcaggcgtacggcgcc 98504
>dbj|AP004587.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0543D10 Length = 134866 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||||||||||||||| ||||||||||| Sbjct: 61787 gcgccctggagacgctgtgcgggcaggc 61760
>dbj|AK120864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023025C14, full insert sequence Length = 1864 Score = 48.1 bits (24), Expect = 0.034 Identities = 30/32 (93%) Strand = Plus / Plus Query: 317 tggagacgctatgcgggcaggcctacggcgcc 348 |||||||||| ||||||||||| ||||||||| Sbjct: 432 tggagacgctgtgcgggcaggcgtacggcgcc 463
>dbj|AK109873.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B05, full insert sequence Length = 1721 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 205 tccgtgatgttctccggccacctcggcaacgtccacctcgccggcgcc 252 |||||||||||| ||||||||||||| | ||| ||||||||||||| Sbjct: 166 tccgtgatgttcgtcggccacctcggcgagctccccctcgccggcgcc 213
>dbj|AK105950.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-205-C12, full insert sequence Length = 1635 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||||||||||||||| ||||||||||| Sbjct: 311 gcgccctggagacgctgtgcgggcaggc 338
>dbj|AK103815.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033147C23, full insert sequence Length = 1597 Score = 48.1 bits (24), Expect = 0.034 Identities = 27/28 (96%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||||||||||||||| ||||||||||| Sbjct: 162 gcgccctggagacgctgtgcgggcaggc 189
>dbj|AK067594.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013109D22, full insert sequence Length = 1853 Score = 48.1 bits (24), Expect = 0.034 Identities = 42/48 (87%) Strand = Plus / Plus Query: 205 tccgtgatgttctccggccacctcggcaacgtccacctcgccggcgcc 252 |||||||||||| ||||||||||||| | ||| ||||||||||||| Sbjct: 395 tccgtgatgttcgtcggccacctcggcgagctccccctcgccggcgcc 442
>ref|XM_462973.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1654 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 317 tggagacgctatgcgggcaggcctacggcgc 347 |||||||||| ||||||||||| |||||||| Sbjct: 435 tggagacgctgtgcgggcaggcgtacggcgc 465
>ref|XM_482980.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2066 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgcc 348 |||| ||||||||||| ||||||||||| | ||||||| Sbjct: 390 gcgcgctggagacgctgtgcgggcaggcgttcggcgcc 427
>ref|NM_195885.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBb0052C09.8), mRNA Length = 1545 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggc 249 |||||||||| |||||| ||||||||||||| | |||| ||||||||| Sbjct: 170 tggtgtccgtcatgttcgtcggccacctcggcgagctccagctcgccggc 219 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 281 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 317
>dbj|AP004643.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1113_A10 Length = 160089 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgcc 348 |||| ||||||||||| ||||||||||| | ||||||| Sbjct: 115596 gcgcgctggagacgctgtgcgggcaggcgttcggcgcc 115633
>dbj|AK105578.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-128-E01, full insert sequence Length = 1782 Score = 44.1 bits (22), Expect = 0.53 Identities = 43/50 (86%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccggc 249 |||||||||| |||||| ||||||||||||| | |||| ||||||||| Sbjct: 216 tggtgtccgtcatgttcgtcggccacctcggcgagctccagctcgccggc 265 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 433 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 469
>dbj|AK067748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013118K06, full insert sequence Length = 2067 Score = 44.1 bits (22), Expect = 0.53 Identities = 34/38 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgcc 348 |||| ||||||||||| ||||||||||| | ||||||| Sbjct: 390 gcgcgctggagacgctgtgcgggcaggcgttcggcgcc 427
>emb|AM183309.1| Colocasia esculenta microsatellite, clone Ces-1B03 Length = 242 Score = 44.1 bits (22), Expect = 0.53 Identities = 28/30 (93%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcct 340 |||| ||||||||||| ||||||||||||| Sbjct: 180 gcgcgctggagacgctgtgcgggcaggcct 209
>gb|AY549188.1| Streptomyces platensis cytochrome P450 monooxygenase CYP107Z11 (ema9) gene, complete cds Length = 1970 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ggcgaggccctgctcgccggc 101 ||||||||||||||||||||| Sbjct: 282 ggcgaggccctgctcgccggc 302
>gb|AY545995.1| Streptomyces tubercidicus cytochrome P450 monooxygenase CYP107Z12 (ema1) gene, complete cds Length = 3629 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 81 ggcgaggccctgctcgccggc 101 ||||||||||||||||||||| Sbjct: 857 ggcgaggccctgctcgccggc 877
>ref|XM_483675.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1936 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggca 335 |||| |||||||||||||||||||| Sbjct: 446 gcgcgctggagacgctatgcgggca 470
>ref|NM_195888.1| Oryza sativa (japonica cultivar-group) putative integral membrane protein (OSJNBb0052C09.11), mRNA Length = 975 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||| ||||| ||||||||||| |||||||| Sbjct: 200 gcgcgctggacacgctgtgcgggcaggcgtacggcgc 236 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Plus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccgg 248 |||||||||| |||||| ||||||||||||| | |||| |||||||| Sbjct: 89 tggtgtccgtcatgttcgtcggccacctcggcgagctccagctcgccgg 137
>gb|BT018805.1| Zea mays clone EL01N0529G01.d mRNA sequence Length = 1984 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||||||||| ||||||||||| | |||||| Sbjct: 450 gcgcgctggagacgctgtgcgggcaggcgttcggcgc 486
>gb|AC164954.3| Culex pipiens quinquefasciatus, clone Culex pipiens quinquefasciatus-3940128D9, complete sequence Length = 128585 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 267 ctgggccaccgtcaccggctacgcc 291 |||||||||||||||||||| |||| Sbjct: 39188 ctgggccaccgtcaccggcttcgcc 39164
>dbj|AP003912.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1479_B11 Length = 105702 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggca 335 |||| |||||||||||||||||||| Sbjct: 69828 gcgcgctggagacgctatgcgggca 69804
>dbj|AK070238.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023043J23, full insert sequence Length = 1936 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggca 335 |||| |||||||||||||||||||| Sbjct: 446 gcgcgctggagacgctatgcgggca 470
>gb|AY596297.1| Haloarcula marismortui ATCC 43049 chromosome I, complete sequence Length = 3131724 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 445 ccgctgcttctgtgcctgcat 465 ||||||||||||||||||||| Sbjct: 1121945 ccgctgcttctgtgcctgcat 1121965
>gb|AY664417.1| Zea mays cultivar Mo17 locus 9002, complete sequence Length = 366120 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccgg 248 |||||||||| |||||| |||||||||||| || ||| ||||||||| Sbjct: 133868 tggtgtccgtcatgttcgtcggccacctcgggaagctccccctcgccgg 133820
>gb|AY664413.1| Zea mays cultivar B73 locus 9002, complete sequence Length = 317137 Score = 42.1 bits (21), Expect = 2.1 Identities = 42/49 (85%) Strand = Plus / Minus Query: 200 tggtgtccgtgatgttctccggccacctcggcaacgtccacctcgccgg 248 |||||||||| |||||| |||||||||||| || ||| ||||||||| Sbjct: 126336 tggtgtccgtcatgttcgtcggccacctcgggaagctccccctcgccgg 126288
>gb|AE015451.1| Pseudomonas putida KT2440 complete genome Length = 6181863 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 83 cgaggccctgctcgccggcgt 103 ||||||||||||||||||||| Sbjct: 5222468 cgaggccctgctcgccggcgt 5222448
>gb|AC121489.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1217B09, complete sequence Length = 148894 Score = 42.1 bits (21), Expect = 2.1 Identities = 33/37 (89%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggcctacggcgc 347 |||| ||||||||||| ||||||||||| | |||||| Sbjct: 36809 gcgcgctggagacgctgtgcgggcaggcgttcggcgc 36845
>ref|NM_188526.1| Oryza sativa (japonica cultivar-group), Ozsa8195 predicted mRNA Length = 1926 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gcggtgtccgtggtcatcgccgtc 426 |||||||||| ||||||||||||| Sbjct: 796 gcggtgtccgcggtcatcgccgtc 819
>ref|XM_468447.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1719 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||| ||||||||||| ||||||||||| Sbjct: 461 gcgcgctggagacgctgtgcgggcaggc 488
>ref|NM_191377.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1332 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||| ||||||||||| ||||||||||| Sbjct: 242 gcgcgctggagacgctgtgcgggcaggc 269
>gb|BT019018.1| Zea mays clone Contig516.F mRNA sequence Length = 1546 Score = 40.1 bits (20), Expect = 8.3 Identities = 29/32 (90%) Strand = Plus / Plus Query: 316 ctggagacgctatgcgggcaggcctacggcgc 347 ||||||||||| ||||||||||| | |||||| Sbjct: 15 ctggagacgctgtgcgggcaggcgttcggcgc 46
>gb|AY523973.1|AY523972S2 Azospirillum brasilense plasmid 90 MDa, partial sequence Length = 67651 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 60 cgccgacggcaaggacggcg 79 |||||||||||||||||||| Sbjct: 31339 cgccgacggcaaggacggcg 31358
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ggcgaggccctgctcgccggcgtg 104 |||||||| ||||||||||||||| Sbjct: 4543589 ggcgaggcgctgctcgccggcgtg 4543566
>ref|XM_793927.1| PREDICTED: Strongylocentrotus purpuratus similar to Retinoblastoma-like protein 1 (107 kDa retinoblastoma-associated protein) (PRB1) (P107) (LOC594490), mRNA Length = 1857 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 222 ccacctcggcaacgtccacc 241 |||||||||||||||||||| Sbjct: 872 ccacctcggcaacgtccacc 891
>emb|AL050338.12|HSJ899B16 Human DNA sequence from clone RP5-899B16 on chromosome 6q23.2-24.3 Contains two novel genes, complete sequence Length = 122564 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 534 ctccttccttcagtgccttc 553 |||||||||||||||||||| Sbjct: 35192 ctccttccttcagtgccttc 35173
>gb|BT009378.1| Triticum aestivum clone wlm96.pk031.e10:fis, full insert mRNA sequence Length = 1558 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||| ||||||||||| ||||||||||| Sbjct: 169 gcgcgctggagacgctgtgcgggcaggc 196
>emb|AL939109.1|SCO939109 Streptomyces coelicolor A3(2) complete genome; segment 6/29 Length = 277000 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 399 ggcggcggtgtccgtggtca 418 |||||||||||||||||||| Sbjct: 174858 ggcggcggtgtccgtggtca 174877
>emb|AJ715866.1| Locusta migratoria mRNA for eukaryotic translation initiation factor 2 gamma subunit (eIF2g gene) Length = 1834 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 143 agctgcagttcgctgtgccg 162 |||||||||||||||||||| Sbjct: 1128 agctgcagttcgctgtgccg 1147
>dbj|AB169879.1| Macaca fascicularis brain cDNA, clone: QflA-13065, similar to human pleckstrin homology domain containing, family B(evectins) member 2 (PLEKHB2), mRNA, RefSeq: NM_017958.1 Length = 3541 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 426 cctgtggctgttcacggagc 445 |||||||||||||||||||| Sbjct: 1757 cctgtggctgttcacggagc 1776
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 81 ggcgaggccctgctcgccggcgtg 104 |||||||| ||||||||||||||| Sbjct: 4812816 ggcgaggcgctgctcgccggcgtg 4812793 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 243 cgccggcgccacgctcggca 262 |||||||||||||||||||| Sbjct: 1216700 cgccggcgccacgctcggca 1216719
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||| ||||||||||| ||||||||||| Sbjct: 35286692 gcgcgctggagacgctgtgcgggcaggc 35286719
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||| ||||||||||| ||||||||||| Sbjct: 32265073 gcgcgctggagacgctgtgcgggcaggc 32265046 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gcggtgtccgtggtcatcgccgtc 426 |||||||||| ||||||||||||| Sbjct: 6768170 gcggtgtccgcggtcatcgccgtc 6768147
>dbj|AP003239.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0403C05 Length = 151085 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Minus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||| ||||||||||| ||||||||||| Sbjct: 135826 gcgcgctggagacgctgtgcgggcaggc 135799
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 87 gccctgctcgccggcgtggt 106 |||||||||||||||||||| Sbjct: 1114177 gccctgctcgccggcgtggt 1114158
>dbj|AP001800.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0443E05 Length = 176935 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gcggtgtccgtggtcatcgccgtc 426 |||||||||| ||||||||||||| Sbjct: 120322 gcggtgtccgcggtcatcgccgtc 120299
>dbj|AP002835.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0417G05 Length = 147803 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Minus Query: 403 gcggtgtccgtggtcatcgccgtc 426 |||||||||| ||||||||||||| Sbjct: 50231 gcggtgtccgcggtcatcgccgtc 50208
>dbj|AP004020.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1119_A01 Length = 108727 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||| ||||||||||| ||||||||||| Sbjct: 37026 gcgcgctggagacgctgtgcgggcaggc 37053
>dbj|AP004878.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0474F11 Length = 139544 Score = 40.1 bits (20), Expect = 8.3 Identities = 26/28 (92%) Strand = Plus / Plus Query: 311 gcgccctggagacgctatgcgggcaggc 338 |||| ||||||||||| ||||||||||| Sbjct: 98742 gcgcgctggagacgctgtgcgggcaggc 98769
>dbj|AK110821.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-171-H01, full insert sequence Length = 1730 Score = 40.1 bits (20), Expect = 8.3 Identities = 23/24 (95%) Strand = Plus / Plus Query: 403 gcggtgtccgtggtcatcgccgtc 426 |||||||||| ||||||||||||| Sbjct: 350 gcggtgtccgcggtcatcgccgtc 373
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Plus Query: 54 cgagcccgccgacggcaagg 73 |||||||||||||||||||| Sbjct: 2075138 cgagcccgccgacggcaagg 2075157 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,867,193 Number of Sequences: 3902068 Number of extensions: 3867193 Number of successful extensions: 88299 Number of sequences better than 10.0: 80 Number of HSP's better than 10.0 without gapping: 85 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 86318 Number of HSP's gapped (non-prelim): 1972 length of query: 612 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 589 effective length of database: 17,143,297,704 effective search space: 10097402347656 effective search space used: 10097402347656 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
