No.
Definition
Score (bits)
E Value
1 dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D...
72
3e-09
2 dbj|AP005457.3| Oryza sativa (japonica cultivar-group) genomic D...
72
3e-09
3 dbj|AP003770.3| Oryza sativa (japonica cultivar-group) genomic D...
72
3e-09
4 dbj|AK101257.1| Oryza sativa (japonica cultivar-group) cDNA clon...
72
3e-09
5 gb|DQ195081.1| Oryza sativa (indica cultivar-group) putative leu...
68
4e-08
6 gb|AY730046.1| Oryza sativa (indica cultivar-group) putative leu...
68
4e-08
7 gb|AY714497.1| Oryza sativa (japonica cultivar-group) clone OsJa...
68
4e-08
8 gb|AY714496.1| Oryza sativa (indica cultivar-group) clone OsInlk...
68
4e-08
9 gb|AY714491.1| Oryza sativa (indica cultivar-group) clone OsInlk...
68
4e-08
10 gb|AY756174.4| Oryza rufipogon putative leucine-rich repeat rece...
68
4e-08
11 dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D...
68
4e-08
12 dbj|AP005896.3| Oryza sativa (japonica cultivar-group) genomic D...
68
4e-08
13 dbj|AP007224.2| Oryza sativa (japonica cultivar-group) genomic D...
68
4e-08
14 dbj|AK100376.1| Oryza sativa (japonica cultivar-group) cDNA clon...
68
4e-08
15 gb|AY714494.1| Oryza sativa (indica cultivar-group) clone OsInlk...
64
6e-07
16 dbj|AP004871.3| Oryza sativa (japonica cultivar-group) genomic D...
64
6e-07
17 dbj|AP004843.2| Oryza sativa (japonica cultivar-group) genomic D...
64
6e-07
18 dbj|AK121860.1| Oryza sativa (japonica cultivar-group) cDNA clon...
64
6e-07
19 dbj|AK108027.1| Oryza sativa (japonica cultivar-group) cDNA clon...
64
6e-07
20 dbj|AK102244.1| Oryza sativa (japonica cultivar-group) cDNA clon...
64
6e-07
21 dbj|AK099976.1| Oryza sativa (japonica cultivar-group) cDNA clon...
64
6e-07
22 dbj|AK073014.1| Oryza sativa (japonica cultivar-group) cDNA clon...
64
6e-07
23 gb|AY714493.1| Oryza sativa (indica cultivar-group) clone OsInlk...
62
2e-06
24 gb|AY714492.1| Oryza sativa (indica cultivar-group) clone OsInlk...
62
2e-06
25 dbj|AK111546.1| Oryza sativa (japonica cultivar-group) cDNA clon...
62
2e-06
26 dbj|AK111975.1| Oryza sativa (japonica cultivar-group) cDNA clon...
56
2e-04
27 dbj|AK111871.1| Oryza sativa (japonica cultivar-group) cDNA clon...
56
2e-04
28 dbj|AK069356.1| Oryza sativa (japonica cultivar-group) cDNA clon...
56
2e-04
29 dbj|AK065392.1| Oryza sativa (japonica cultivar-group) cDNA clon...
56
2e-04
30 gb|AY714495.1| Oryza sativa (indica cultivar-group) clone OsInlk...
52
0.002
31 dbj|AK100447.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.002
32 dbj|AK059616.1| Oryza sativa (japonica cultivar-group) cDNA clon...
52
0.002
33 dbj|AK111680.1| Oryza sativa (japonica cultivar-group) cDNA clon...
50
0.009
34 dbj|AK106999.1| Oryza sativa (japonica cultivar-group) cDNA clon...
48
0.037
35 gb|AY954965.1| Bacteriophage 52A, complete genome
46
0.15
36 gb|AY954964.1| Bacteriophage 29, complete genome
46
0.15
37 dbj|AK107566.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.15
38 dbj|AK067517.1| Oryza sativa (japonica cultivar-group) cDNA clon...
46
0.15
39 ref|XM_465977.1| Oryza sativa (japonica cultivar-group), mRNA
42
2.3
40 gb|AC155252.2| Mus musculus BAC clone RP24-190H19 from chromosom...
42
2.3
41 dbj|AP005497.4| Oryza sativa (japonica cultivar-group) genomic D...
42
2.3
42 dbj|AP004062.3| Oryza sativa (japonica cultivar-group) genomic D...
42
2.3
43 dbj|AK106640.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
2.3
44 dbj|AK102276.1| Oryza sativa (japonica cultivar-group) cDNA clon...
42
2.3
45 emb|AL806511.9| Mouse DNA sequence from clone RP23-22B15 on chro...
42
2.3
46 ref|NM_129791.2| Arabidopsis thaliana ATP binding / kinase/ prot...
40
9.1
47 gb|AC004779.1| Homo sapiens chromosome 16, cosmid clone 304A10 (...
40
9.1
48 gb|AC005564.1| Homo sapiens chromosome 16, cosmid clone 420F6 (L...
40
9.1
49 gb|AC099695.15| Mus musculus chromosome 10, clone RP23-234P12, c...
40
9.1
50 gb|BC071002.1| Xenopus laevis hypothetical protein MGC80030, mRN...
40
9.1
51 gb|AF111982.2| Human poliovirus 1 isolate CHN-Yunnan/92, complet...
40
9.1
52 ref|XM_655604.1| Aspergillus nidulans FGSC A4 hypothetical prote...
40
9.1
53 gb|AC158616.8| Mus musculus 10 BAC RP23-227E23 (Roswell Park Can...
40
9.1
54 gb|BC059968.1| Xenopus laevis hypothetical protein MGC68542, mRN...
40
9.1
55 emb|BX936280.10| Platypus DNA sequence from clone XX-452D13, com...
40
9.1
56 emb|AL449264.18| Human DNA sequence from clone RP11-485H8 on chr...
40
9.1
57 emb|CR589876.7| Zebrafish DNA sequence from clone DKEY-53I3 in l...
40
9.1
58 emb|BX470259.9| Zebrafish DNA sequence from clone CH211-225N18 i...
40
9.1
59 gb|AC005956.4| Arabidopsis thaliana chromosome 2 clone MHK10 map...
40
9.1
60 emb|BX000702.11| Zebrafish DNA sequence from clone CH211-160D19 ...
40
9.1
61 gb|AC007151.2|AC007151 Homo sapiens clone RPCI-11_95J11, complet...
40
9.1
62 dbj|AK102751.1| Oryza sativa (japonica cultivar-group) cDNA clon...
40
9.1
63 gb|AC113281.15| Mus musculus chromosome 5, clone RP23-393G8, com...
40
9.1
64 emb|BX000439.11| Mouse DNA sequence from clone RP23-430L20 on ch...
40
9.1
65 gb|AC151579.2| Mus musculus BAC clone RP23-191P7 from 1, complet...
40
9.1
66 gb|AC144818.4| Mus musculus BAC clone RP23-97O1 from chromosome ...
40
9.1
67 gb|L22847.1|HNNH1P Helianthus annuus homeodomain containing prot...
40
9.1
>dbj|AP008212.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
sequence
Length = 30731886
Score = 71.9 bits (36), Expect = 3e-09
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 438 cctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 28523931 cctgtaaataaattgcttgagatattcagtacctggagag 28523970
Score = 56.0 bits (28), Expect = 2e-04
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 438 cctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 28470377 cctgtaaatgaattgctcgagatattcagtacctggagag 28470338
Score = 54.0 bits (27), Expect = 6e-04
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaat 47
||||||| || |||||||||||||||| ||| ||||| |||||||||
Sbjct: 28470826 gcagctcaccagacatgttgttgttgtccaaccggagctcctccaat 28470780
Score = 46.1 bits (23), Expect = 0.15
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaat 47
||||||| || |||||||||||||||| || ||||| |||||||||
Sbjct: 28523482 gcagctcaccagacatgttgttgttgtccagccggagctcctccaat 28523528
Score = 40.1 bits (20), Expect = 9.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 362 tggtatctgcccagtaaagctgttattgctggcatt 397
||||||||| || ||||||||||| ||||| |||||
Sbjct: 28523846 tggtatctgtcctgtaaagctgttgttgcttgcatt 28523881
Score = 40.1 bits (20), Expect = 9.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 525 tggttaaagctgacatcaaggattgtgatgctgctg 560
||||| |||||||||||||||| | ||||||||||
Sbjct: 28489914 tggttgaagctgacatcaaggacagcgatgctgctg 28489949
>dbj|AP005457.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
clone:P0532H03
Length = 166128
Score = 71.9 bits (36), Expect = 3e-09
Identities = 39/40 (97%)
Strand = Plus / Plus
Query: 438 cctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||||||||||||||||| ||||||||||||||||
Sbjct: 130964 cctgtaaataaattgcttgagatattcagtacctggagag 131003
Score = 56.0 bits (28), Expect = 2e-04
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 438 cctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||| ||||||| ||||| ||||||||||||||||
Sbjct: 77410 cctgtaaatgaattgctcgagatattcagtacctggagag 77371
Score = 54.0 bits (27), Expect = 6e-04
Identities = 42/47 (89%)
Strand = Plus / Minus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaat 47
||||||| || |||||||||||||||| ||| ||||| |||||||||
Sbjct: 77859 gcagctcaccagacatgttgttgttgtccaaccggagctcctccaat 77813
Score = 46.1 bits (23), Expect = 0.15
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaat 47
||||||| || |||||||||||||||| || ||||| |||||||||
Sbjct: 130515 gcagctcaccagacatgttgttgttgtccagccggagctcctccaat 130561
Score = 40.1 bits (20), Expect = 9.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 362 tggtatctgcccagtaaagctgttattgctggcatt 397
||||||||| || ||||||||||| ||||| |||||
Sbjct: 130879 tggtatctgtcctgtaaagctgttgttgcttgcatt 130914
Score = 40.1 bits (20), Expect = 9.1
Identities = 32/36 (88%)
Strand = Plus / Plus
Query: 525 tggttaaagctgacatcaaggattgtgatgctgctg 560
||||| |||||||||||||||| | ||||||||||
Sbjct: 96947 tggttgaagctgacatcaaggacagcgatgctgctg 96982
>gb|DQ195081.1 | Oryza sativa (indica cultivar-group) putative leucine-rich repeat
receptor-like kinase gene cluster, complete sequence;
ternary complex factor MIP1-like gene, complete cds;
putative membrane-associated protein and gag-pol
precursor, pseudogenes, complete sequence; and unknown
genes
Length = 94077
Score = 67.9 bits (34), Expect = 4e-08
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattgag 400
||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 39388 agttggtatcttcccagtaaagctgttattgctggcgttgag 39347
Score = 67.9 bits (34), Expect = 4e-08
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattgagtgtgaccagatt 412
||||||||| ||||||||||||||||| || ||||||||||||| ||||||||
Sbjct: 2845 agttggtatttgcccagtaaagctgttgttactggcattgagtgcaaccagatt 2792
Score = 63.9 bits (32), Expect = 6e-07
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtc 60
||||||||||||||||||||||||||| || | ||| ||||||| | ||||||| ||||
Sbjct: 39743 gcagctcccctgacatgttgttgttgtccagatggaactcctccagtctcttgagctgtc 39684
Query: 61 ctat 64
||||
Sbjct: 39683 ctat 39680
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||||||| | ||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 39312 gatggaaaatttcctgtaaacaagttgcttgagatgttcagtacctgcagag 39261
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||||||| ||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct: 28528 gatggaaactgtcctgtaaacaagttgctcgagatgttcagcacctggagag 28477
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| || |||||||||||||| ||||||||||| ||||||||
Sbjct: 15854 gatggaaactgccctgtaaataaattacttgagatgttgagtacctg 15808
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||| |||||||||| ||||||||||| | ||||| ||||||||||||||||| ||||
Sbjct: 9695 tgtggtggatggaaactgtcctgtaaacgagttgctcgagatgttcagtacctgcagag 9637
Score = 60.0 bits (30), Expect = 1e-05
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 266 tggagcaattaccaagacttggggggatgctgccactgaattcgttgaaacacagttcaa 325
|||||||||||||||| | | |||||||||||||||||||| ||| |||| |||||||
Sbjct: 16024 tggagcaattaccaagtcccgaggggatgctgccactgaattgattgtaacatagttcaa 15965
Query: 326 acacag 331
|||||
Sbjct: 15964 gcacag 15959
Score = 58.0 bits (29), Expect = 4e-05
Identities = 80/97 (82%)
Strand = Plus / Minus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||||||||||| | |||| |||| ||||| ||||||||||||| |||||||| |||
Sbjct: 10113 acatgttgttgtggcccaaaaggagttcctctaatttcttgagttcacctatagattctg 10054
Query: 73 gaatcttgccgctgaagctgttcctttcaagatcaag 109
||||| |||| |||| |||||| | ||||||||||
Sbjct: 10053 gaatcctgccattgaaattgttccctccaagatcaag 10017
Score = 56.0 bits (28), Expect = 2e-04
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 363 ggtatctgcccagtaaagctgttattgctggcattgagtg 402
||||||||||||||||| ||||| ||||||||||| ||||
Sbjct: 9760 ggtatctgcccagtaaatctgttgttgctggcattcagtg 9721
Score = 52.0 bits (26), Expect = 0.002
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattgag 400
||||||||| | ||||||||||||||| |||||||||||||
Sbjct: 35222 agttggtatattcccagtaaagctgttggtgctggcattgag 35181
Score = 48.1 bits (24), Expect = 0.037
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 527 gttaaagctgacatcaaggattgtgatgctgctggacgacaccaattc 574
|||||| |||||||||| || ||||||||||||| |||||||||||
Sbjct: 39211 gttaaaactgacatcaaagaccatgatgctgctggatgacaccaattc 39164
Score = 48.1 bits (24), Expect = 0.037
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 425 ggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||| ||||||| || ||||| ||||||||||| ||||||||
Sbjct: 2770 ggatggaaactgtcctgctaacaaattacttgagatgttgagtacctg 2723
Score = 46.1 bits (23), Expect = 0.15
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctataga 67
|||| ||||||||||||| | |||| ||||||||| | ||||| || ||||||||
Sbjct: 22810 acattttgttgttgttcagatggagttcctccaatctgttgagctgacctataga 22756
Score = 46.1 bits (23), Expect = 0.15
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| ||||||| || ||||| |||||||| |||||||||||
Sbjct: 22385 gatggaaactgtcctgctaacaaattacttgagatattcagtacctg 22339
Score = 44.1 bits (22), Expect = 0.58
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 266 tggagcaattaccaagacttggggggatgctgccactgaatt 307
|||||||||||||||| | ||| ||||||| ||||||||||
Sbjct: 35316 tggagcaattaccaagccctggagggatgcctccactgaatt 35275
Score = 44.1 bits (22), Expect = 0.58
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 525 tggttaaagctgacatcaaggattgtgatgctgctggacgacacca 570
|||||||| ||||||||||||| |||||||||||| |||||||
Sbjct: 35047 tggttaaaactgacatcaaggaccacgatgctgctggatgacacca 35002
Score = 42.1 bits (21), Expect = 2.3
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 437 tcctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||| || ||||| || |||||||||||||| ||||
Sbjct: 35135 tcctgtaaacaagttgctcgatatgttcagtacctgcagag 35095
Score = 42.1 bits (21), Expect = 2.3
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 527 gttaaagctgacatcaaggattgtgatgctgctggacgacaccaattct 575
|||||||||||| |||| || |||| |||||||| ||||||||||||
Sbjct: 15753 gttaaagctgacgtcaacgacgatgatactgctggaagacaccaattct 15705
>gb|AY730046.1 | Oryza sativa (indica cultivar-group) putative leucine-rich repeat
receptor-like kinase genes, complete cds
Length = 42445
Score = 67.9 bits (34), Expect = 4e-08
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattgag 400
||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 38893 agttggtatcttcccagtaaagctgttattgctggcgttgag 38852
Score = 67.9 bits (34), Expect = 4e-08
Identities = 49/54 (90%)
Strand = Plus / Minus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattgagtgtgaccagatt 412
||||||||| ||||||||||||||||| || ||||||||||||| ||||||||
Sbjct: 2317 agttggtatttgcccagtaaagctgttgttactggcattgagtgcaaccagatt 2264
Score = 63.9 bits (32), Expect = 6e-07
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtc 60
||||||||||||||||||||||||||| || | ||| ||||||| | ||||||| ||||
Sbjct: 39248 gcagctcccctgacatgttgttgttgtccagatggaactcctccagtctcttgagctgtc 39189
Query: 61 ctat 64
||||
Sbjct: 39188 ctat 39185
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||||||| | ||||||||| || ||||||||||||||||||||||| ||||
Sbjct: 38817 gatggaaaatttcctgtaaacaagttgcttgagatgttcagtacctgcagag 38766
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||||||| ||||||||||| || ||||| ||||||||||| ||||||||||
Sbjct: 27999 gatggaaactgtcctgtaaacaagttgctcgagatgttcagcacctggagag 27948
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| || |||||||||||||| ||||||||||| ||||||||
Sbjct: 15325 gatggaaactgccctgtaaataaattacttgagatgttgagtacctg 15279
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||| |||||||||| ||||||||||| | ||||| ||||||||||||||||| ||||
Sbjct: 9167 tgtggtggatggaaactgtcctgtaaacgagttgctcgagatgttcagtacctgcagag 9109
Score = 60.0 bits (30), Expect = 1e-05
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 266 tggagcaattaccaagacttggggggatgctgccactgaattcgttgaaacacagttcaa 325
|||||||||||||||| | | |||||||||||||||||||| ||| |||| |||||||
Sbjct: 15495 tggagcaattaccaagtcccgaggggatgctgccactgaattgattgtaacatagttcaa 15436
Query: 326 acacag 331
|||||
Sbjct: 15435 gcacag 15430
Score = 58.0 bits (29), Expect = 4e-05
Identities = 80/97 (82%)
Strand = Plus / Minus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||||||||||| | |||| |||| ||||| ||||||||||||| |||||||| |||
Sbjct: 9585 acatgttgttgtggcccaaaaggagttcctctaatttcttgagttcacctatagattctg 9526
Query: 73 gaatcttgccgctgaagctgttcctttcaagatcaag 109
||||| |||| |||| |||||| | ||||||||||
Sbjct: 9525 gaatcctgccattgaaattgttccctccaagatcaag 9489
Score = 56.0 bits (28), Expect = 2e-04
Identities = 37/40 (92%)
Strand = Plus / Minus
Query: 363 ggtatctgcccagtaaagctgttattgctggcattgagtg 402
||||||||||||||||| ||||| ||||||||||| ||||
Sbjct: 9232 ggtatctgcccagtaaatctgttgttgctggcattcagtg 9193
Score = 52.0 bits (26), Expect = 0.002
Identities = 38/42 (90%)
Strand = Plus / Minus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattgag 400
||||||||| | ||||||||||||||| |||||||||||||
Sbjct: 34727 agttggtatattcccagtaaagctgttggtgctggcattgag 34686
Score = 48.1 bits (24), Expect = 0.037
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 527 gttaaagctgacatcaaggattgtgatgctgctggacgacaccaattc 574
|||||| |||||||||| || ||||||||||||| |||||||||||
Sbjct: 38716 gttaaaactgacatcaaagaccatgatgctgctggatgacaccaattc 38669
Score = 48.1 bits (24), Expect = 0.037
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 425 ggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||| ||||||| || ||||| ||||||||||| ||||||||
Sbjct: 2242 ggatggaaactgtcctgctaacaaattacttgagatgttgagtacctg 2195
Score = 46.1 bits (23), Expect = 0.15
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctataga 67
|||| ||||||||||||| | |||| ||||||||| | ||||| || ||||||||
Sbjct: 22281 acattttgttgttgttcagatggagttcctccaatctgttgagctgacctataga 22227
Score = 46.1 bits (23), Expect = 0.15
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| ||||||| || ||||| |||||||| |||||||||||
Sbjct: 21856 gatggaaactgtcctgctaacaaattacttgagatattcagtacctg 21810
Score = 44.1 bits (22), Expect = 0.58
Identities = 37/42 (88%)
Strand = Plus / Minus
Query: 266 tggagcaattaccaagacttggggggatgctgccactgaatt 307
|||||||||||||||| | ||| ||||||| ||||||||||
Sbjct: 34821 tggagcaattaccaagccctggagggatgcctccactgaatt 34780
Score = 44.1 bits (22), Expect = 0.58
Identities = 40/46 (86%)
Strand = Plus / Minus
Query: 525 tggttaaagctgacatcaaggattgtgatgctgctggacgacacca 570
|||||||| ||||||||||||| |||||||||||| |||||||
Sbjct: 34552 tggttaaaactgacatcaaggaccacgatgctgctggatgacacca 34507
Score = 42.1 bits (21), Expect = 2.3
Identities = 36/41 (87%)
Strand = Plus / Minus
Query: 437 tcctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||| || ||||| || |||||||||||||| ||||
Sbjct: 34640 tcctgtaaacaagttgctcgatatgttcagtacctgcagag 34600
Score = 42.1 bits (21), Expect = 2.3
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 527 gttaaagctgacatcaaggattgtgatgctgctggacgacaccaattct 575
|||||||||||| |||| || |||| |||||||| ||||||||||||
Sbjct: 15224 gttaaagctgacgtcaacgacgatgatactgctggaagacaccaattct 15176
>gb|AY756174.4 | Oryza rufipogon putative leucine-rich repeat receptor-like kinases and
ternary complex factor MIP1-like genes, complete cds;
retrotransposon putative membrane-associated protein and
gag-pol precursor, pseudogenes, complete sequence; and
unknown genes
Length = 102522
Score = 67.9 bits (34), Expect = 4e-08
Identities = 40/42 (95%)
Strand = Plus / Minus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattgag 400
||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 47950 agttggtatcttcccagtaaagctgttattgctggcgttgag 47909
Score = 63.9 bits (32), Expect = 6e-07
Identities = 56/64 (87%)
Strand = Plus / Minus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtc 60
||||||||||||||||||||||||||| || | ||| ||||||| | ||||||| ||||
Sbjct: 48305 gcagctcccctgacatgttgttgttgtccagatggaactcctccagtctcttgagctgtc 48246
Query: 61 ctat 64
||||
Sbjct: 48245 ctat 48242
Score = 63.9 bits (32), Expect = 6e-07
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 527 gttaaagctgacatcaaggattgtgatgctgctggacgacaccaattc 574
|||||| |||||||||||||| ||||||||||||| |||||||||||
Sbjct: 47773 gttaaaactgacatcaaggatcatgatgctgctggatgacaccaattc 47726
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Minus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||||||| ||||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 36241 gatggaaactgtcctgtaaacgagttgctcgagatgttcagtacctggagag 36190
Score = 63.9 bits (32), Expect = 6e-07
Identities = 44/48 (91%)
Strand = Plus / Minus
Query: 425 ggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||| |||||| |||| ||||||||||||||||| ||||||||
Sbjct: 9684 ggatggaaactgtcctttaaacaaattgcttgagatgtttagtacctg 9637
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Minus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| || |||||||||||||| ||||||||||| ||||||||
Sbjct: 22943 gatggaaactgccctgtaaataaattacttgagatgttgagtacctg 22897
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Minus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||| |||||||||| ||||||||||| | ||||| ||||||||||||||||| ||||
Sbjct: 16519 tgtggtggatggaaactgtcctgtaaacgagttgctcgagatgttcagtacctgcagag 16461
Score = 60.0 bits (30), Expect = 1e-05
Identities = 57/66 (86%)
Strand = Plus / Minus
Query: 266 tggagcaattaccaagacttggggggatgctgccactgaattcgttgaaacacagttcaa 325
|||||||||||||||| | || |||||| ||||||||||||| ||| |||| |||||||
Sbjct: 23113 tggagcaattaccaagtcctgaggggatactgccactgaattgattgtaacatagttcaa 23054
Query: 326 acacag 331
|||||
Sbjct: 23053 gcacag 23048
Score = 58.0 bits (29), Expect = 4e-05
Identities = 80/97 (82%)
Strand = Plus / Minus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||||||||||| | |||| |||| ||||| ||||||||||||| |||||||| |||
Sbjct: 16937 acatgttgttgtggcccaaaaggagttcctctaatttcttgagttcacctatagattctg 16878
Query: 73 gaatcttgccgctgaagctgttcctttcaagatcaag 109
||||| |||| |||| |||||| | ||||||||||
Sbjct: 16877 gaatcctgccattgaaattgttccctccaagatcaag 16841
Score = 58.0 bits (29), Expect = 4e-05
Identities = 74/89 (83%)
Strand = Plus / Minus
Query: 21 ttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactggaatcttg 80
||||||| |||| |||| |||| |||| | |||| || ||||||| | |||||||| ||
Sbjct: 10100 ttgttgtccaaatggagctcctgcaatctactgagctgacctatagtatctggaatcatg 10041
Query: 81 ccgctgaagctgttcctttcaagatcaag 109
||||||||| |||||| | ||||||||||
Sbjct: 10040 ccgctgaagttgttccctccaagatcaag 10012
Score = 56.0 bits (28), Expect = 2e-04
Identities = 82/100 (82%)
Strand = Plus / Minus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||| ||||||||||||||| |||| ||||||||| | ||||| || || ||||| |||
Sbjct: 3311 acattttgttgttgttcaaatggagttcctccaatctgttgagctgaccgatagactctg 3252
Query: 73 gaatcttgccgctgaagctgttcctttcaagatcaagggt 112
|||| || || |||||| ||||| | |||| ||||||||
Sbjct: 3251 gaatgttaccactgaagttgttctctccaaggtcaagggt 3212
Score = 56.0 bits (28), Expect = 2e-04
Identities = 104/128 (81%), Gaps = 1/128 (0%)
Strand = Plus / Minus
Query: 286 ggggggatgctgccactgaattcgttgaaacacagttcaaacacag-tgagggtggtgag 344
||||| ||||| |||||||||| |||| ||| ||||||| ||||| | ||| |||||||
Sbjct: 3036 gggggaatgctcccactgaattggttgtaactgagttcaagcacagctaaggatggtgag 2977
Query: 345 gtactacagagttgagttggtatctgcccagtaaagctgttattgctggcattgagtgtg 404
| | |||| | ||||||||| | ||||||||||||||| || ||| ||||||||| |
Sbjct: 2976 ttggtgcagaaattagttggtattttcccagtaaagctgttgttactgacattgagtgcg 2917
Query: 405 accagatt 412
|||||||
Sbjct: 2916 gccagatt 2909
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Minus
Query: 365 tatctgcccagtaaagctgttattgctggcattgagtg 402
||||||||||||||| ||||| ||||||||||| ||||
Sbjct: 16582 tatctgcccagtaaatctgttgttgctggcattcagtg 16545
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattga 399
||||||||| | ||||||||||||||| ||||||||||||
Sbjct: 43785 agttggtatattcccagtaaagctgttggtgctggcattga 43745
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Minus
Query: 437 tcctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||| || |||||||| |||||||||||||| ||||
Sbjct: 43698 tcctgtaaacaagttgcttgatatgttcagtacctgcagag 43658
Score = 50.1 bits (25), Expect = 0.009
Identities = 55/65 (84%)
Strand = Plus / Minus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||||||||||| | |||| |||| ||||| ||||||||||||| |||||||| |||
Sbjct: 7851 acatgttgttgtagcccaaatggagttcctctaatttcttgagtttacctatagattctg 7792
Query: 73 gaatc 77
|||||
Sbjct: 7791 gaatc 7787
Score = 48.1 bits (24), Expect = 0.037
Identities = 63/76 (82%)
Strand = Plus / Minus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtc 60
|||||||||| |||||||||||||||| || | |||| | ||||| | | || || ||||
Sbjct: 44140 gcagctccccggacatgttgttgttgtccagatggagcttctccagtcttttcagctgtc 44081
Query: 61 ctatagaaactggaat 76
|||| ||| |||||||
Sbjct: 44080 ctatggaatctggaat 44065
Score = 48.1 bits (24), Expect = 0.037
Identities = 42/48 (87%)
Strand = Plus / Minus
Query: 425 ggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||| ||||||| || ||||| ||||||||||| ||||||||
Sbjct: 2887 ggatggaaactgtcctgctaacaaattacttgagatgttgagtacctg 2840
Score = 46.1 bits (23), Expect = 0.15
Identities = 47/55 (85%)
Strand = Plus / Minus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctataga 67
|||| ||||||||||||| | |||| ||||||||| | ||||| || ||||||||
Sbjct: 29865 acattttgttgttgttcagatggagttcctccaatctgttgagctgacctataga 29811
Score = 46.1 bits (23), Expect = 0.15
Identities = 41/47 (87%)
Strand = Plus / Minus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| ||||||| || ||||| |||||||| |||||||||||
Sbjct: 29440 gatggaaactgtcctgctaacaaattacttgagatattcagtacctg 29394
Score = 42.1 bits (21), Expect = 2.3
Identities = 42/49 (85%)
Strand = Plus / Minus
Query: 527 gttaaagctgacatcaaggattgtgatgctgctggacgacaccaattct 575
|||||||||||| |||| ||| |||| ||||||| ||||||||||||
Sbjct: 22842 gttaaagctgacgtcaacgatgatgatagtgctggaagacaccaattct 22794
Score = 40.1 bits (20), Expect = 9.1
Identities = 38/44 (86%)
Strand = Plus / Minus
Query: 39 tcctccaatttcttgagttgtcctatagaaactggaatcttgcc 82
||||||||| |||| ||||| | |||||| |||||||||||||
Sbjct: 23342 tcctccaatctcttcagttggctgatagaatctggaatcttgcc 23299
>dbj|AP008208.1 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
sequence
Length = 35954743
Score = 67.9 bits (34), Expect = 4e-08
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||| |||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 3050550 tgtggtggatggaaagtctcctgtaaatcggttgcttgagatgttcagtacctg 3050603
Score = 67.9 bits (34), Expect = 4e-08
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 266 tggagcaattaccaagacttggggggatgctgccactgaattcgttgaaacacagttcaa 325
|||||||||||||||| | || |||||||||||||||||||| ||| |||| |||||||
Sbjct: 2961398 tggagcaattaccaagtcctgaggggatgctgccactgaattgattgtaacatagttcaa 2961457
Query: 326 acacag 331
|||||
Sbjct: 2961458 gcacag 2961463
Score = 67.9 bits (34), Expect = 4e-08
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattgag 400
||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 2936627 agttggtatcttcccagtaaagctgttattgctggcgttgag 2936668
Score = 63.9 bits (32), Expect = 6e-07
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 438 cctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 3134538 cctgtaaataagttgcttgagatgttcagtacctgaagag 3134577
Score = 63.9 bits (32), Expect = 6e-07
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 438 cctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 3108132 cctgtaaataagttgcttgagatgttcagtacctgaagag 3108171
Score = 63.9 bits (32), Expect = 6e-07
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 425 ggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||| |||||| |||| ||||||||||||||||| ||||||||
Sbjct: 2974865 ggatggaaactgtcctttaaacaaattgcttgagatgtttagtacctg 2974912
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||||||| ||||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 2948267 gatggaaactgtcctgtaaacgagttgctcgagatgttcagtacctggagag 2948318
Score = 63.9 bits (32), Expect = 6e-07
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 527 gttaaagctgacatcaaggattgtgatgctgctggacgacaccaattc 574
|||||| |||||||||||||| ||||||||||||| |||||||||||
Sbjct: 2936804 gttaaaactgacatcaaggatcatgatgctgctggatgacaccaattc 2936851
Score = 63.9 bits (32), Expect = 6e-07
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtc 60
||||||||||||||||||||||||||| || | ||| ||||||| | ||||||| ||||
Sbjct: 2936272 gcagctcccctgacatgttgttgttgtccagatggaactcctccagtctcttgagctgtc 2936331
Query: 61 ctat 64
||||
Sbjct: 2936332 ctat 2936335
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||| |||||||||| ||||||||||| | ||||| ||||||||||||||||| ||||
Sbjct: 2968029 tgtggtggatggaaactgtcctgtaaacgagttgctcgagatgttcagtacctgcagag 2968087
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| || |||||||||||||| ||||||||||| ||||||||
Sbjct: 2961568 gatggaaactgccctgtaaataaattacttgagatgttgagtacctg 2961614
Score = 58.0 bits (29), Expect = 4e-05
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||||||||||| | |||| |||| ||||| ||||||||||||| |||||||| |||
Sbjct: 2967611 acatgttgttgtggcccaaaaggagttcctctaatttcttgagttcacctatagattctg 2967670
Query: 73 gaatcttgccgctgaagctgttcctttcaagatcaag 109
||||| |||| |||| |||||| | ||||||||||
Sbjct: 2967671 gaatcctgccattgaaattgttccctccaagatcaag 2967707
Score = 56.0 bits (28), Expect = 2e-04
Identities = 104/128 (81%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 286 ggggggatgctgccactgaattcgttgaaacacagttcaaacacag-tgagggtggtgag 344
||||| ||||| |||||||||| |||| ||| ||||||| ||||| | ||| |||||||
Sbjct: 2981514 gggggaatgctcccactgaattggttgtaactgagttcaagcacagctaaggatggtgag 2981573
Query: 345 gtactacagagttgagttggtatctgcccagtaaagctgttattgctggcattgagtgtg 404
| | |||| | ||||||||| | ||||||||||||||| || ||| ||||||||| |
Sbjct: 2981574 ttggtgcagaaattagttggtattttcccagtaaagctgttgttactgacattgagtgcg 2981633
Query: 405 accagatt 412
|||||||
Sbjct: 2981634 gccagatt 2981641
Score = 56.0 bits (28), Expect = 2e-04
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||| ||||||||||||||| |||| ||||||||| | ||||| || || ||||| |||
Sbjct: 2981239 acattttgttgttgttcaaatggagttcctccaatctgttgagctgaccgatagactctg 2981298
Query: 73 gaatcttgccgctgaagctgttcctttcaagatcaagggt 112
|||| || || |||||| ||||| | |||| ||||||||
Sbjct: 2981299 gaatgttaccactgaagttgttctctccaaggtcaagggt 2981338
Score = 54.0 bits (27), Expect = 6e-04
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||| ||||||||||||||| |||| || |||||| | ||||| || |||||||| |||
Sbjct: 3125660 acattttgttgttgttcaaaaggagttcttccaatctgttgagctggcctatagactctg 3125719
Query: 73 gaatcttgccgctgaagctgttc 95
|||| || || |||||| |||||
Sbjct: 3125720 gaatgttaccactgaagttgttc 3125742
Score = 54.0 bits (27), Expect = 6e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||| |||||||||| || |||| ||| || |||||||| |||||||||||||| ||||
Sbjct: 3104261 tgtggtggatggaaattgccctgcaaacaagttgcttgaaatgttcagtacctgcagag 3104319
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 262 agcctggagcaattaccaagacttggggggatgctgccactgaattcgttgaaacacagt 321
|||||||||||||| ||||| | ||||| ||||| |||||||||| |||| ||| |||
Sbjct: 3125915 agcctggagcaatttccaagtccagggggaatgctcccactgaattggttgtaactgagt 3125974
Query: 322 tcaaacacag 331
|||| |||||
Sbjct: 3125975 tcaagcacag 3125984
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 360 gttggtatctgcccagtaaagctgttattgctggcatt 397
||||| |||||||||||||| ||||| |||||||||||
Sbjct: 3094412 gttggcatctgcccagtaaatctgttgttgctggcatt 3094449
Score = 52.0 bits (26), Expect = 0.002
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||||||||| | ||||||||| ||||||||||| |||||||||||
Sbjct: 3086587 tgtgatggatggaaattctcctgtaaaccggttgcttgagatattcagtacctg 3086640
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 365 tatctgcccagtaaagctgttattgctggcattgagtg 402
||||||||||||||| ||||| ||||||||||| ||||
Sbjct: 2967966 tatctgcccagtaaatctgttgttgctggcattcagtg 2968003
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 531 aagctgacatcaaggattgtgatgctgctggacgacaccaa 571
||||||||||||||||| ||||||||| |||||||||||
Sbjct: 3104373 aagctgacatcaaggatgacgatgctgctcgacgacaccaa 3104413
Score = 50.1 bits (25), Expect = 0.009
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacct 471
||||||||||||||| | ||||||||| ||||||||||| ||||||||||
Sbjct: 3072171 tgtgatggatggaaactctcctgtaaaccggttgcttgagatattcagtacct 3072223
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 437 tcctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||| || |||||||| |||||||||||||| ||||
Sbjct: 2940879 tcctgtaaacaagttgcttgatatgttcagtacctgcagag 2940919
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattga 399
||||||||| | ||||||||||||||| ||||||||||||
Sbjct: 2940792 agttggtatattcccagtaaagctgttggtgctggcattga 2940832
Score = 48.1 bits (24), Expect = 0.037
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 450 ttgcttgagatgttcagtacctggagag 477
||||||||||| ||||||||||||||||
Sbjct: 3030618 ttgcttgagatattcagtacctggagag 3030645
Score = 48.1 bits (24), Expect = 0.037
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 425 ggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||| ||||||| || ||||| ||||||||||| ||||||||
Sbjct: 2981663 ggatggaaactgtcctgctaacaaattacttgagatgttgagtacctg 2981710
Score = 48.1 bits (24), Expect = 0.037
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtc 60
|||||||||| |||||||||||||||| || | |||| | ||||| | | || || ||||
Sbjct: 2940437 gcagctccccggacatgttgttgttgtccagatggagcttctccagtcttttcagctgtc 2940496
Query: 61 ctatagaaactggaat 76
|||| ||| |||||||
Sbjct: 2940497 ctatggaatctggaat 2940512
Score = 46.1 bits (23), Expect = 0.15
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 365 tatctgcccagtaaagctgttattgctggcattga 399
||||||||||||||| ||||| |||||||| ||||
Sbjct: 3038268 tatctgcccagtaaaactgttgttgctggcgttga 3038234
Score = 46.1 bits (23), Expect = 0.15
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 286 ggggggatgctgccactgaattcgttg 312
|||||||||||||||||||||| ||||
Sbjct: 3030444 ggggggatgctgccactgaattggttg 3030470
Score = 46.1 bits (23), Expect = 0.15
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| ||||||| || ||||| |||||||| |||||||||||
Sbjct: 2955069 gatggaaactgtcctgctaacaaattacttgagatattcagtacctg 2955115
Score = 46.1 bits (23), Expect = 0.15
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctataga 67
|||| ||||||||||||| | |||| ||||||||| | ||||| || ||||||||
Sbjct: 2954644 acattttgttgttgttcagatggagttcctccaatctgttgagctgacctataga 2954698
Score = 44.1 bits (22), Expect = 0.58
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 531 aagctgacatcaaggattgtgatgctgctggacgacaccaattctgatggtagaccgctg 590
|||||||| |||||||| ||||||||| || |||| | ||||||||||| |||| |
Sbjct: 3126194 aagctgacgtcaaggatgatgatgctgcctgatgacattacttctgatggtaatccgccg 3126253
Query: 591 gagagtgagttgtg 604
|| |||||||||||
Sbjct: 3126254 gatagtgagttgtg 3126267
Score = 44.1 bits (22), Expect = 0.58
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 gcagctcccctgacatgttgttgttgttca 30
|||||||||| || ||||||||||||||||
Sbjct: 3038635 gcagctccccagatatgttgttgttgttca 3038606
Score = 44.1 bits (22), Expect = 0.58
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 266 tggagcaattaccaagacttggggggatgctgccactgaatt 307
|||||||||||||||| | ||| ||||||| ||||||||||
Sbjct: 2940698 tggagcaattaccaagccctggagggatgcctccactgaatt 2940739
Score = 42.1 bits (21), Expect = 2.3
Identities = 48/57 (84%)
Strand = Plus / Minus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggag 475
|||| |||||||||| ||| ||||| | ||| |||||||| ||||||||||||||
Sbjct: 18670441 tgtggtggatggaaatgctccagtaaacagattacttgagatattcagtacctggag 18670385
Score = 42.1 bits (21), Expect = 2.3
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 361 ttggtatctgcccagtaaagctgttattgctggcatt 397
|||||||||| || |||||||||| |||||||||||
Sbjct: 3134452 ttggtatctgtcctataaagctgttgttgctggcatt 3134488
Score = 42.1 bits (21), Expect = 2.3
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 361 ttggtatctgcccagtaaagctgttattgctggcatt 397
|||||||||| || |||||||||| |||||||||||
Sbjct: 3108046 ttggtatctgtcctataaagctgttgttgctggcatt 3108082
Score = 42.1 bits (21), Expect = 2.3
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 285 tggggggatgctgccactgaa 305
|||||||||||||||||||||
Sbjct: 3000303 tggggggatgctgccactgaa 3000323
Score = 42.1 bits (21), Expect = 2.3
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||||||||||| | ||| |||| ||||| ||||||||||||| |||||||| |||
Sbjct: 2976697 acatgttgttgtagcctaaatggagttcctctaatttcttgagtttacctatagattctg 2976756
Query: 73 gaatc 77
|||||
Sbjct: 2976757 gaatc 2976761
Score = 42.1 bits (21), Expect = 2.3
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 527 gttaaagctgacatcaaggattgtgatgctgctggacgacaccaattct 575
|||||||||||| |||| ||| |||| ||||||| ||||||||||||
Sbjct: 2961669 gttaaagctgacgtcaacgatgatgatagtgctggaagacaccaattct 2961717
Score = 40.1 bits (20), Expect = 9.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 286 ggggggatgctgccactgaa 305
||||||||||||||||||||
Sbjct: 3038348 ggggggatgctgccactgaa 3038329
Score = 40.1 bits (20), Expect = 9.1
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 450 ttgcttgagatgttcagtacctggagag 477
||||| ||||| ||||||||||||||||
Sbjct: 3007269 ttgctcgagatattcagtacctggagag 3007296
Score = 40.1 bits (20), Expect = 9.1
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 519 ttgagatggttaaagctgacatcaagga 546
||||| ||||| ||||||||||||||||
Sbjct: 3000547 ttgaggtggttgaagctgacatcaagga 3000574
Score = 40.1 bits (20), Expect = 9.1
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 39 tcctccaatttcttgagttgtcctatagaaactggaatcttgcc 82
||||||||| |||| ||||| | |||||| |||||||||||||
Sbjct: 2961169 tcctccaatctcttcagttggctgatagaatctggaatcttgcc 2961212
>dbj|AP005896.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
clone:OSJNBb0032C09
Length = 127263
Score = 67.9 bits (34), Expect = 4e-08
Identities = 49/54 (90%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||| |||||||||||| |||||||||| |||||||||||||||||||||||
Sbjct: 96661 tgtggtggatggaaagtctcctgtaaatcggttgcttgagatgttcagtacctg 96714
Score = 67.9 bits (34), Expect = 4e-08
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 266 tggagcaattaccaagacttggggggatgctgccactgaattcgttgaaacacagttcaa 325
|||||||||||||||| | || |||||||||||||||||||| ||| |||| |||||||
Sbjct: 7509 tggagcaattaccaagtcctgaggggatgctgccactgaattgattgtaacatagttcaa 7568
Query: 326 acacag 331
|||||
Sbjct: 7569 gcacag 7574
Score = 63.9 bits (32), Expect = 6e-07
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 425 ggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||| |||||| |||| ||||||||||||||||| ||||||||
Sbjct: 20976 ggatggaaactgtcctttaaacaaattgcttgagatgtttagtacctg 21023
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||| |||||||||| ||||||||||| | ||||| ||||||||||||||||| ||||
Sbjct: 14140 tgtggtggatggaaactgtcctgtaaacgagttgctcgagatgttcagtacctgcagag 14198
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| || |||||||||||||| ||||||||||| ||||||||
Sbjct: 7679 gatggaaactgccctgtaaataaattacttgagatgttgagtacctg 7725
Score = 58.0 bits (29), Expect = 4e-05
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||||||||||| | |||| |||| ||||| ||||||||||||| |||||||| |||
Sbjct: 13722 acatgttgttgtggcccaaaaggagttcctctaatttcttgagttcacctatagattctg 13781
Query: 73 gaatcttgccgctgaagctgttcctttcaagatcaag 109
||||| |||| |||| |||||| | ||||||||||
Sbjct: 13782 gaatcctgccattgaaattgttccctccaagatcaag 13818
Score = 56.0 bits (28), Expect = 2e-04
Identities = 104/128 (81%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 286 ggggggatgctgccactgaattcgttgaaacacagttcaaacacag-tgagggtggtgag 344
||||| ||||| |||||||||| |||| ||| ||||||| ||||| | ||| |||||||
Sbjct: 27625 gggggaatgctcccactgaattggttgtaactgagttcaagcacagctaaggatggtgag 27684
Query: 345 gtactacagagttgagttggtatctgcccagtaaagctgttattgctggcattgagtgtg 404
| | |||| | ||||||||| | ||||||||||||||| || ||| ||||||||| |
Sbjct: 27685 ttggtgcagaaattagttggtattttcccagtaaagctgttgttactgacattgagtgcg 27744
Query: 405 accagatt 412
|||||||
Sbjct: 27745 gccagatt 27752
Score = 56.0 bits (28), Expect = 2e-04
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||| ||||||||||||||| |||| ||||||||| | ||||| || || ||||| |||
Sbjct: 27350 acattttgttgttgttcaaatggagttcctccaatctgttgagctgaccgatagactctg 27409
Query: 73 gaatcttgccgctgaagctgttcctttcaagatcaagggt 112
|||| || || |||||| ||||| | |||| ||||||||
Sbjct: 27410 gaatgttaccactgaagttgttctctccaaggtcaagggt 27449
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 365 tatctgcccagtaaagctgttattgctggcattgagtg 402
||||||||||||||| ||||| ||||||||||| ||||
Sbjct: 14077 tatctgcccagtaaatctgttgttgctggcattcagtg 14114
Score = 50.1 bits (25), Expect = 0.009
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacct 471
||||||||||||||| | ||||||||| ||||||||||| ||||||||||
Sbjct: 118282 tgtgatggatggaaactctcctgtaaaccggttgcttgagatattcagtacct 118334
Score = 48.1 bits (24), Expect = 0.037
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 450 ttgcttgagatgttcagtacctggagag 477
||||||||||| ||||||||||||||||
Sbjct: 76729 ttgcttgagatattcagtacctggagag 76756
Score = 48.1 bits (24), Expect = 0.037
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 425 ggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||| ||||||| || ||||| ||||||||||| ||||||||
Sbjct: 27774 ggatggaaactgtcctgctaacaaattacttgagatgttgagtacctg 27821
Score = 46.1 bits (23), Expect = 0.15
Identities = 32/35 (91%)
Strand = Plus / Minus
Query: 365 tatctgcccagtaaagctgttattgctggcattga 399
||||||||||||||| ||||| |||||||| ||||
Sbjct: 84379 tatctgcccagtaaaactgttgttgctggcgttga 84345
Score = 46.1 bits (23), Expect = 0.15
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 286 ggggggatgctgccactgaattcgttg 312
|||||||||||||||||||||| ||||
Sbjct: 76555 ggggggatgctgccactgaattggttg 76581
Score = 46.1 bits (23), Expect = 0.15
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| ||||||| || ||||| |||||||| |||||||||||
Sbjct: 1180 gatggaaactgtcctgctaacaaattacttgagatattcagtacctg 1226
Score = 46.1 bits (23), Expect = 0.15
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctataga 67
|||| ||||||||||||| | |||| ||||||||| | ||||| || ||||||||
Sbjct: 755 acattttgttgttgttcagatggagttcctccaatctgttgagctgacctataga 809
Score = 44.1 bits (22), Expect = 0.58
Identities = 28/30 (93%)
Strand = Plus / Minus
Query: 1 gcagctcccctgacatgttgttgttgttca 30
|||||||||| || ||||||||||||||||
Sbjct: 84746 gcagctccccagatatgttgttgttgttca 84717
Score = 42.1 bits (21), Expect = 2.3
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 285 tggggggatgctgccactgaa 305
|||||||||||||||||||||
Sbjct: 46414 tggggggatgctgccactgaa 46434
Score = 42.1 bits (21), Expect = 2.3
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||||||||||| | ||| |||| ||||| ||||||||||||| |||||||| |||
Sbjct: 22808 acatgttgttgtagcctaaatggagttcctctaatttcttgagtttacctatagattctg 22867
Query: 73 gaatc 77
|||||
Sbjct: 22868 gaatc 22872
Score = 42.1 bits (21), Expect = 2.3
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 527 gttaaagctgacatcaaggattgtgatgctgctggacgacaccaattct 575
|||||||||||| |||| ||| |||| ||||||| ||||||||||||
Sbjct: 7780 gttaaagctgacgtcaacgatgatgatagtgctggaagacaccaattct 7828
Score = 40.1 bits (20), Expect = 9.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 286 ggggggatgctgccactgaa 305
||||||||||||||||||||
Sbjct: 84459 ggggggatgctgccactgaa 84440
Score = 40.1 bits (20), Expect = 9.1
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 450 ttgcttgagatgttcagtacctggagag 477
||||| ||||| ||||||||||||||||
Sbjct: 53380 ttgctcgagatattcagtacctggagag 53407
Score = 40.1 bits (20), Expect = 9.1
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 519 ttgagatggttaaagctgacatcaagga 546
||||| ||||| ||||||||||||||||
Sbjct: 46658 ttgaggtggttgaagctgacatcaagga 46685
Score = 40.1 bits (20), Expect = 9.1
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 39 tcctccaatttcttgagttgtcctatagaaactggaatcttgcc 82
||||||||| |||| ||||| | |||||| |||||||||||||
Sbjct: 7280 tcctccaatctcttcagttggctgatagaatctggaatcttgcc 7323
>dbj|AP007224.2 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0463E12
Length = 161081
Score = 67.9 bits (34), Expect = 4e-08
Identities = 58/66 (87%)
Strand = Plus / Plus
Query: 266 tggagcaattaccaagacttggggggatgctgccactgaattcgttgaaacacagttcaa 325
|||||||||||||||| | || |||||||||||||||||||| ||| |||| |||||||
Sbjct: 87037 tggagcaattaccaagtcctgaggggatgctgccactgaattgattgtaacatagttcaa 87096
Query: 326 acacag 331
|||||
Sbjct: 87097 gcacag 87102
Score = 67.9 bits (34), Expect = 4e-08
Identities = 40/42 (95%)
Strand = Plus / Plus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattgag 400
||||||||||| |||||||||||||||||||||||| |||||
Sbjct: 62266 agttggtatcttcccagtaaagctgttattgctggcgttgag 62307
Score = 63.9 bits (32), Expect = 6e-07
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 425 ggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||| |||||| |||| ||||||||||||||||| ||||||||
Sbjct: 100504 ggatggaaactgtcctttaaacaaattgcttgagatgtttagtacctg 100551
Score = 63.9 bits (32), Expect = 6e-07
Identities = 47/52 (90%)
Strand = Plus / Plus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||||||| ||||||||||| | ||||| ||||||||||||||||||||||
Sbjct: 73906 gatggaaactgtcctgtaaacgagttgctcgagatgttcagtacctggagag 73957
Score = 63.9 bits (32), Expect = 6e-07
Identities = 44/48 (91%)
Strand = Plus / Plus
Query: 527 gttaaagctgacatcaaggattgtgatgctgctggacgacaccaattc 574
|||||| |||||||||||||| ||||||||||||| |||||||||||
Sbjct: 62443 gttaaaactgacatcaaggatcatgatgctgctggatgacaccaattc 62490
Score = 63.9 bits (32), Expect = 6e-07
Identities = 56/64 (87%)
Strand = Plus / Plus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtc 60
||||||||||||||||||||||||||| || | ||| ||||||| | ||||||| ||||
Sbjct: 61911 gcagctcccctgacatgttgttgttgtccagatggaactcctccagtctcttgagctgtc 61970
Query: 61 ctat 64
||||
Sbjct: 61971 ctat 61974
Score = 61.9 bits (31), Expect = 2e-06
Identities = 52/59 (88%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||| |||||||||| ||||||||||| | ||||| ||||||||||||||||| ||||
Sbjct: 93668 tgtggtggatggaaactgtcctgtaaacgagttgctcgagatgttcagtacctgcagag 93726
Score = 61.9 bits (31), Expect = 2e-06
Identities = 43/47 (91%)
Strand = Plus / Plus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| || |||||||||||||| ||||||||||| ||||||||
Sbjct: 87207 gatggaaactgccctgtaaataaattacttgagatgttgagtacctg 87253
Score = 58.0 bits (29), Expect = 4e-05
Identities = 80/97 (82%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||||||||||| | |||| |||| ||||| ||||||||||||| |||||||| |||
Sbjct: 93250 acatgttgttgtggcccaaaaggagttcctctaatttcttgagttcacctatagattctg 93309
Query: 73 gaatcttgccgctgaagctgttcctttcaagatcaag 109
||||| |||| |||| |||||| | ||||||||||
Sbjct: 93310 gaatcctgccattgaaattgttccctccaagatcaag 93346
Score = 56.0 bits (28), Expect = 2e-04
Identities = 104/128 (81%), Gaps = 1/128 (0%)
Strand = Plus / Plus
Query: 286 ggggggatgctgccactgaattcgttgaaacacagttcaaacacag-tgagggtggtgag 344
||||| ||||| |||||||||| |||| ||| ||||||| ||||| | ||| |||||||
Sbjct: 107153 gggggaatgctcccactgaattggttgtaactgagttcaagcacagctaaggatggtgag 107212
Query: 345 gtactacagagttgagttggtatctgcccagtaaagctgttattgctggcattgagtgtg 404
| | |||| | ||||||||| | ||||||||||||||| || ||| ||||||||| |
Sbjct: 107213 ttggtgcagaaattagttggtattttcccagtaaagctgttgttactgacattgagtgcg 107272
Query: 405 accagatt 412
|||||||
Sbjct: 107273 gccagatt 107280
Score = 56.0 bits (28), Expect = 2e-04
Identities = 82/100 (82%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||| ||||||||||||||| |||| ||||||||| | ||||| || || ||||| |||
Sbjct: 106878 acattttgttgttgttcaaatggagttcctccaatctgttgagctgaccgatagactctg 106937
Query: 73 gaatcttgccgctgaagctgttcctttcaagatcaagggt 112
|||| || || |||||| ||||| | |||| ||||||||
Sbjct: 106938 gaatgttaccactgaagttgttctctccaaggtcaagggt 106977
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 365 tatctgcccagtaaagctgttattgctggcattgagtg 402
||||||||||||||| ||||| ||||||||||| ||||
Sbjct: 93605 tatctgcccagtaaatctgttgttgctggcattcagtg 93642
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 437 tcctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||| || |||||||| |||||||||||||| ||||
Sbjct: 66518 tcctgtaaacaagttgcttgatatgttcagtacctgcagag 66558
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 359 agttggtatctgcccagtaaagctgttattgctggcattga 399
||||||||| | ||||||||||||||| ||||||||||||
Sbjct: 66431 agttggtatattcccagtaaagctgttggtgctggcattga 66471
Score = 48.1 bits (24), Expect = 0.037
Identities = 27/28 (96%)
Strand = Plus / Plus
Query: 450 ttgcttgagatgttcagtacctggagag 477
||||||||||| ||||||||||||||||
Sbjct: 156257 ttgcttgagatattcagtacctggagag 156284
Score = 48.1 bits (24), Expect = 0.037
Identities = 42/48 (87%)
Strand = Plus / Plus
Query: 425 ggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||| ||||||| || ||||| ||||||||||| ||||||||
Sbjct: 107302 ggatggaaactgtcctgctaacaaattacttgagatgttgagtacctg 107349
Score = 48.1 bits (24), Expect = 0.037
Identities = 63/76 (82%)
Strand = Plus / Plus
Query: 1 gcagctcccctgacatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtc 60
|||||||||| |||||||||||||||| || | |||| | ||||| | | || || ||||
Sbjct: 66076 gcagctccccggacatgttgttgttgtccagatggagcttctccagtcttttcagctgtc 66135
Query: 61 ctatagaaactggaat 76
|||| ||| |||||||
Sbjct: 66136 ctatggaatctggaat 66151
Score = 46.1 bits (23), Expect = 0.15
Identities = 26/27 (96%)
Strand = Plus / Plus
Query: 286 ggggggatgctgccactgaattcgttg 312
|||||||||||||||||||||| ||||
Sbjct: 156083 ggggggatgctgccactgaattggttg 156109
Score = 46.1 bits (23), Expect = 0.15
Identities = 41/47 (87%)
Strand = Plus / Plus
Query: 426 gatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
|||||||| ||||||| || ||||| |||||||| |||||||||||
Sbjct: 80708 gatggaaactgtcctgctaacaaattacttgagatattcagtacctg 80754
Score = 46.1 bits (23), Expect = 0.15
Identities = 47/55 (85%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctataga 67
|||| ||||||||||||| | |||| ||||||||| | ||||| || ||||||||
Sbjct: 80283 acattttgttgttgttcagatggagttcctccaatctgttgagctgacctataga 80337
Score = 44.1 bits (22), Expect = 0.58
Identities = 37/42 (88%)
Strand = Plus / Plus
Query: 266 tggagcaattaccaagacttggggggatgctgccactgaatt 307
|||||||||||||||| | ||| ||||||| ||||||||||
Sbjct: 66337 tggagcaattaccaagccctggagggatgcctccactgaatt 66378
Score = 42.1 bits (21), Expect = 2.3
Identities = 21/21 (100%)
Strand = Plus / Plus
Query: 285 tggggggatgctgccactgaa 305
|||||||||||||||||||||
Sbjct: 125942 tggggggatgctgccactgaa 125962
Score = 42.1 bits (21), Expect = 2.3
Identities = 54/65 (83%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||||||||||| | ||| |||| ||||| ||||||||||||| |||||||| |||
Sbjct: 102336 acatgttgttgtagcctaaatggagttcctctaatttcttgagtttacctatagattctg 102395
Query: 73 gaatc 77
|||||
Sbjct: 102396 gaatc 102400
Score = 42.1 bits (21), Expect = 2.3
Identities = 42/49 (85%)
Strand = Plus / Plus
Query: 527 gttaaagctgacatcaaggattgtgatgctgctggacgacaccaattct 575
|||||||||||| |||| ||| |||| ||||||| ||||||||||||
Sbjct: 87308 gttaaagctgacgtcaacgatgatgatagtgctggaagacaccaattct 87356
Score = 40.1 bits (20), Expect = 9.1
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 450 ttgcttgagatgttcagtacctggagag 477
||||| ||||| ||||||||||||||||
Sbjct: 132908 ttgctcgagatattcagtacctggagag 132935
Score = 40.1 bits (20), Expect = 9.1
Identities = 26/28 (92%)
Strand = Plus / Plus
Query: 519 ttgagatggttaaagctgacatcaagga 546
||||| ||||| ||||||||||||||||
Sbjct: 126186 ttgaggtggttgaagctgacatcaagga 126213
Score = 40.1 bits (20), Expect = 9.1
Identities = 38/44 (86%)
Strand = Plus / Plus
Query: 39 tcctccaatttcttgagttgtcctatagaaactggaatcttgcc 82
||||||||| |||| ||||| | |||||| |||||||||||||
Sbjct: 86808 tcctccaatctcttcagttggctgatagaatctggaatcttgcc 86851
>dbj|AP004871.3 | Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
clone:P0419H03
Length = 129020
Score = 63.9 bits (32), Expect = 6e-07
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 438 cctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 62692 cctgtaaataagttgcttgagatgttcagtacctgaagag 62731
Score = 63.9 bits (32), Expect = 6e-07
Identities = 38/40 (95%)
Strand = Plus / Plus
Query: 438 cctgtaaataaattgcttgagatgttcagtacctggagag 477
||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 36286 cctgtaaataagttgcttgagatgttcagtacctgaagag 36325
Score = 54.0 bits (27), Expect = 6e-04
Identities = 69/83 (83%)
Strand = Plus / Plus
Query: 13 acatgttgttgttgttcaaacggaggtcctccaatttcttgagttgtcctatagaaactg 72
|||| ||||||||||||||| |||| || |||||| | ||||| || |||||||| |||
Sbjct: 53814 acattttgttgttgttcaaaaggagttcttccaatctgttgagctggcctatagactctg 53873
Query: 73 gaatcttgccgctgaagctgttc 95
|||| || || |||||| |||||
Sbjct: 53874 gaatgttaccactgaagttgttc 53896
Score = 54.0 bits (27), Expect = 6e-04
Identities = 51/59 (86%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctggagag 477
|||| |||||||||| || |||| ||| || |||||||| |||||||||||||| ||||
Sbjct: 32415 tgtggtggatggaaattgccctgcaaacaagttgcttgaaatgttcagtacctgcagag 32473
Score = 52.0 bits (26), Expect = 0.002
Identities = 59/70 (84%)
Strand = Plus / Plus
Query: 262 agcctggagcaattaccaagacttggggggatgctgccactgaattcgttgaaacacagt 321
|||||||||||||| ||||| | ||||| ||||| |||||||||| |||| ||| |||
Sbjct: 54069 agcctggagcaatttccaagtccagggggaatgctcccactgaattggttgtaactgagt 54128
Query: 322 tcaaacacag 331
|||| |||||
Sbjct: 54129 tcaagcacag 54138
Score = 52.0 bits (26), Expect = 0.002
Identities = 35/38 (92%)
Strand = Plus / Plus
Query: 360 gttggtatctgcccagtaaagctgttattgctggcatt 397
||||| |||||||||||||| ||||| |||||||||||
Sbjct: 22566 gttggcatctgcccagtaaatctgttgttgctggcatt 22603
Score = 52.0 bits (26), Expect = 0.002
Identities = 47/54 (87%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacctg 472
||||||||||||||| | ||||||||| ||||||||||| |||||||||||
Sbjct: 14741 tgtgatggatggaaattctcctgtaaaccggttgcttgagatattcagtacctg 14794
Score = 50.1 bits (25), Expect = 0.009
Identities = 37/41 (90%)
Strand = Plus / Plus
Query: 531 aagctgacatcaaggattgtgatgctgctggacgacaccaa 571
||||||||||||||||| ||||||||| |||||||||||
Sbjct: 32527 aagctgacatcaaggatgacgatgctgctcgacgacaccaa 32567
Score = 50.1 bits (25), Expect = 0.009
Identities = 46/53 (86%)
Strand = Plus / Plus
Query: 419 tgtgatggatggaaagtgtcctgtaaataaattgcttgagatgttcagtacct 471
||||||||||||||| | ||||||||| ||||||||||| ||||||||||
Sbjct: 325 tgtgatggatggaaactctcctgtaaaccggttgcttgagatattcagtacct 377
Score = 44.1 bits (22), Expect = 0.58
Identities = 61/74 (82%)
Strand = Plus / Plus
Query: 531 aagctgacatcaaggattgtgatgctgctggacgacaccaattctgatggtagaccgctg 590
|||||||| |||||||| ||||||||| || |||| | ||||||||||| |||| |
Sbjct: 54348 aagctgacgtcaaggatgatgatgctgcctgatgacattacttctgatggtaatccgccg 54407
Query: 591 gagagtgagttgtg 604
|| |||||||||||
Sbjct: 54408 gatagtgagttgtg 54421
Score = 42.1 bits (21), Expect = 2.3
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 361 ttggtatctgcccagtaaagctgttattgctggcatt 397
|||||||||| || |||||||||| |||||||||||
Sbjct: 62606 ttggtatctgtcctataaagctgttgttgctggcatt 62642
Score = 42.1 bits (21), Expect = 2.3
Identities = 33/37 (89%)
Strand = Plus / Plus
Query: 361 ttggtatctgcccagtaaagctgttattgctggcatt 397
|||||||||| || |||||||||| |||||||||||
Sbjct: 36200 ttggtatctgtcctataaagctgttgttgctggcatt 36236
>gb|L22847.1 |HNNH1P Helianthus annuus homeodomain containing protein (HAHB-1) mRNA,
partial cds
Length = 1195
Score = 40.1 bits (20), Expect = 9.1
Identities = 20/20 (100%)
Strand = Plus / Minus
Query: 14 catgttgttgttgttcaaac 33
||||||||||||||||||||
Sbjct: 251 catgttgttgttgttcaaac 232
Database: nt
Posted date: May 29, 2006 11:10 AM
Number of letters in database: 3,984,495,279
Number of sequences in database: 917,343
Database: /shigen/export/home/twatanab/db/nt/nt.01
Posted date: May 29, 2006 11:16 AM
Number of letters in database: 3,988,174,986
Number of sequences in database: 835,257
Database: /shigen/export/home/twatanab/db/nt/nt.02
Posted date: May 29, 2006 11:21 AM
Number of letters in database: 3,991,246,324
Number of sequences in database: 771,481
Database: /shigen/export/home/twatanab/db/nt/nt.03
Posted date: May 29, 2006 11:27 AM
Number of letters in database: 3,990,718,311
Number of sequences in database: 977,174
Database: /shigen/export/home/twatanab/db/nt/nt.04
Posted date: May 29, 2006 11:29 AM
Number of letters in database: 1,278,410,368
Number of sequences in database: 400,813
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.37 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,645,205
Number of Sequences: 3902068
Number of extensions: 6645205
Number of successful extensions: 126527
Number of sequences better than 10.0: 67
Number of HSP's better than 10.0 without gapping: 68
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 125940
Number of HSP's gapped (non-prelim): 579
length of query: 664
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 641
effective length of database: 17,143,297,704
effective search space: 10988853828264
effective search space used: 10988853828264
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)