ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal33f21 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_481988.1| Oryza sativa (japonica cultivar-group), mRNA Length = 815 Score = 430 bits (217), Expect = e-117 Identities = 373/425 (87%) Strand = Plus / Plus Query: 148 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 207 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 104 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 163 Query: 208 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 267 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 164 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 223 Query: 268 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatctagcggaact 327 |||||||| |||| |||||||||||||||||||| |||||||| || || || || || Sbjct: 224 gagatcgagaccatgaagaagtataacgctggaacaaacaaggcggcgtccagtggcaca 283 Query: 328 tccctcaacaccaagcggctcgacgacgacactgagaacctttcccatgagcgtgtttca 387 |||||||||||||||||||| || |||||||| |||| |||| ||||||||||||| ||| Sbjct: 284 tccctcaacaccaagcggctggatgacgacaccgagagccttgcccatgagcgtgtctca 343 Query: 388 agcgacctgaagaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 447 || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 344 agtgacctgaagaaaaacctcatgcaagcaaggctggacaagaagatgacccaggcacag 403 Query: 448 cttgctcagatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcg 507 ||||| |||||||||||||||||||| ||||||||||||||||||||||| || || || Sbjct: 404 cttgcacagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagct 463 Query: 508 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 567 ||||||||| | ||||| || || ||||| || ||||| |||||| | |||||||| || Sbjct: 464 attccgaaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggc 523 Query: 568 aagaa 572 ||||| Sbjct: 524 aagaa 528
>dbj|AK061882.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-F01, full insert sequence Length = 815 Score = 430 bits (217), Expect = e-117 Identities = 373/425 (87%) Strand = Plus / Plus Query: 148 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 207 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 104 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 163 Query: 208 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 267 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 164 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 223 Query: 268 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatctagcggaact 327 |||||||| |||| |||||||||||||||||||| |||||||| || || || || || Sbjct: 224 gagatcgagaccatgaagaagtataacgctggaacaaacaaggcggcgtccagtggcaca 283 Query: 328 tccctcaacaccaagcggctcgacgacgacactgagaacctttcccatgagcgtgtttca 387 |||||||||||||||||||| || |||||||| |||| |||| ||||||||||||| ||| Sbjct: 284 tccctcaacaccaagcggctggatgacgacaccgagagccttgcccatgagcgtgtctca 343 Query: 388 agcgacctgaagaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 447 || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 344 agtgacctgaagaaaaacctcatgcaagcaaggctggacaagaagatgacccaggcacag 403 Query: 448 cttgctcagatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcg 507 ||||| |||||||||||||||||||| ||||||||||||||||||||||| || || || Sbjct: 404 cttgcacagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagct 463 Query: 508 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 567 ||||||||| | ||||| || || ||||| || ||||| |||||| | |||||||| || Sbjct: 464 attccgaaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggc 523 Query: 568 aagaa 572 ||||| Sbjct: 524 aagaa 528
>dbj|AK120339.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013060M10, full insert sequence Length = 823 Score = 430 bits (217), Expect = e-117 Identities = 373/425 (87%) Strand = Plus / Plus Query: 148 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 207 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 107 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 166 Query: 208 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 267 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 167 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 226 Query: 268 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatctagcggaact 327 |||||||| |||| |||||||||||||||||||| |||||||| || || || || || Sbjct: 227 gagatcgagaccatgaagaagtataacgctggaacaaacaaggcggcgtccagtggcaca 286 Query: 328 tccctcaacaccaagcggctcgacgacgacactgagaacctttcccatgagcgtgtttca 387 |||||||||||||||||||| || |||||||| |||| |||| ||||||||||||| ||| Sbjct: 287 tccctcaacaccaagcggctggatgacgacaccgagagccttgcccatgagcgtgtctca 346 Query: 388 agcgacctgaagaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 447 || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 347 agtgacctgaagaaaaacctcatgcaagcaaggctggacaagaagatgacccaggcacag 406 Query: 448 cttgctcagatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcg 507 ||||| |||||||||||||||||||| ||||||||||||||||||||||| || || || Sbjct: 407 cttgcacagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagct 466 Query: 508 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 567 ||||||||| | ||||| || || ||||| || ||||| |||||| | |||||||| || Sbjct: 467 attccgaaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggc 526 Query: 568 aagaa 572 ||||| Sbjct: 527 aagaa 531
>dbj|AK120022.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-186-C04, full insert sequence Length = 1727 Score = 430 bits (217), Expect = e-117 Identities = 373/425 (87%) Strand = Plus / Plus Query: 148 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 207 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 104 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 163 Query: 208 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 267 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 164 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 223 Query: 268 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatctagcggaact 327 |||||||| |||| |||||||||||||||||||| |||||||| || || || || || Sbjct: 224 gagatcgagaccatgaagaagtataacgctggaacaaacaaggcggcgtccagtggcaca 283 Query: 328 tccctcaacaccaagcggctcgacgacgacactgagaacctttcccatgagcgtgtttca 387 |||||||||||||||||||| || |||||||| |||| |||| ||||||||||||| ||| Sbjct: 284 tccctcaacaccaagcggctggatgacgacaccgagagccttgcccatgagcgtgtctca 343 Query: 388 agcgacctgaagaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 447 || ||||||||||||||||| ||||||||||||||||| |||||||||||||||||||| Sbjct: 344 agtgacctgaagaaaaacctcatgcaagcaaggctggacaagaagatgacccaggcacag 403 Query: 448 cttgctcagatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcg 507 ||||| |||||||||||||||||||| ||||||||||||||||||||||| || || || Sbjct: 404 cttgcacagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagct 463 Query: 508 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 567 ||||||||| | ||||| || || ||||| || ||||| |||||| | |||||||| || Sbjct: 464 attccgaaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggc 523 Query: 568 aagaa 572 ||||| Sbjct: 524 aagaa 528
>gb|AY106376.1| Zea mays PCO106666 mRNA sequence Length = 903 Score = 398 bits (201), Expect = e-108 Identities = 369/425 (86%) Strand = Plus / Plus Query: 148 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 207 ||||| ||||| || ||| |||||||||||||||||||| | || |||||||||| ||| Sbjct: 182 atggccgggatcgggccgatcaggcaggactgggagccggtggttgtgcggaagaaggca 241 Query: 208 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 267 | | |||||| | ||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 242 cccaccgccgctgccaagaaggatgagaaggccgtcaacgccgcgcgccgctccggcgcg 301 Query: 268 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatctagcggaact 327 |||||||| |||| ||||||| |||||||| | ||||||||| || || ||||| || Sbjct: 302 gagatcgagaccatgaagaagttcaacgctggtatgaacaaggcggcgtccagcggcaca 361 Query: 328 tccctcaacaccaagcggctcgacgacgacactgagaacctttcccatgagcgtgtttca 387 ||||||||||||||||| |||||||||||||| |||||||| |||||||||| ||| || Sbjct: 362 tccctcaacaccaagcgcctcgacgacgacacagagaacctcgcccatgagcgagttcca 421 Query: 388 agcgacctgaagaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 447 || |||||||||||||| || |||||||||||||| ||||||||| ||||||||||||| Sbjct: 422 agtgacctgaagaaaaatctcatgcaagcaaggctcgataagaagttgacccaggcacag 481 Query: 448 cttgctcagatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcg 507 |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 482 cttgctcagatgatcaatgagaagccacaggtgatccaggagtatgagtcaggcaaggca 541 Query: 508 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 567 ||||| ||| | ||||| ||||| |||||||||||||| || ||| | ||||||||| || Sbjct: 542 attcccaaccagcagatcattggcaagctcgagagggccctgggaacgaagctgcgtggc 601 Query: 568 aagaa 572 ||||| Sbjct: 602 aagaa 606
>gb|BT018329.1| Zea mays clone EL01T0208G01.c mRNA sequence Length = 700 Score = 391 bits (197), Expect = e-105 Identities = 368/425 (86%) Strand = Plus / Plus Query: 148 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 207 ||||| ||||| || ||| |||| ||||||||||||||| | || |||||||||| ||| Sbjct: 114 atggccgggatcgggccgatcagacaggactgggagccggtggttgtgcggaagaaggca 173 Query: 208 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 267 | | |||||| | ||||||||| || |||||||||||||| || |||||||||||||| Sbjct: 174 cccaccgccgctgccaagaaggatgagaaggccgtcaacgccgcgcgccgctccggcgcg 233 Query: 268 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatctagcggaact 327 |||||||| |||| |||||||| |||||||| | ||||||||| || || ||||| || Sbjct: 234 gagatcgagaccatgaagaagtacaacgctggtatgaacaaggcggcgtccagcggcaca 293 Query: 328 tccctcaacaccaagcggctcgacgacgacactgagaacctttcccatgagcgtgtttca 387 ||||||||||||||||| |||||||| ||||| |||||||| |||||||||| ||| || Sbjct: 294 tccctcaacaccaagcgcctcgacgatgacacagagaacctcgcccatgagcgagttcca 353 Query: 388 agcgacctgaagaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 447 || |||||||||||||| || |||||||||||||| ||||||||| ||||||||||||| Sbjct: 354 agtgacctgaagaaaaatctcatgcaagcaaggctcgataagaagttgacccaggcacag 413 Query: 448 cttgctcagatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcg 507 |||||||||||||||||||||||||||||||||||||||||||| ||||| |||||||| Sbjct: 414 cttgctcagatgatcaatgagaagccacaggtgatccaggagtatgagtcaggcaaggca 473 Query: 508 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 567 ||||| ||| | ||||| ||||| |||||||||||||| || ||| | ||||||||| || Sbjct: 474 attcccaaccagcagatcattggcaagctcgagagggccctgggaacgaagctgcgtggc 533 Query: 568 aagaa 572 ||||| Sbjct: 534 aagaa 538
>gb|BT016361.1| Zea mays clone Contig194 mRNA sequence Length = 770 Score = 335 bits (169), Expect = 1e-88 Identities = 361/425 (84%) Strand = Plus / Plus Query: 148 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 207 ||||| ||||| || ||| |||||||||||||||||||| | || |||||||||| ||| Sbjct: 115 atggccgggatcggaccgatcaggcaggactgggagccggtcgttgtgcggaagaaggca 174 Query: 208 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 267 | | |||||| | ||||||||| || |||||||||||||| || |||||| |||| || Sbjct: 175 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcgcgccgcgccggtgcg 234 Query: 268 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatctagcggaact 327 |||||||| |||| |||||||| |||||||| ||||||||||| ||||| ||||| || Sbjct: 235 gagatcgataccatgaagaagtacaacgctggtacgaacaaggcggcatccagcggtaca 294 Query: 328 tccctcaacaccaagcggctcgacgacgacactgagaacctttcccatgagcgtgtttca 387 ||||||||||||||||| |||||||||||||| || ||||| |||||||||| ||| || Sbjct: 295 tccctcaacaccaagcgcctcgacgacgacaccgaaaacctcgcccatgagcgagttcca 354 Query: 388 agcgacctgaagaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 447 || || |||||||| || || |||||||||||||| ||||||||| |||| ||||||||| Sbjct: 355 agtgatctgaagaagaatctcatgcaagcaaggctcgataagaagctgacacaggcacaa 414 Query: 448 cttgctcagatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcg 507 |||||||||||||| |||||||||||||||||||| |||||||| || || |||||||| Sbjct: 415 cttgctcagatgataaatgagaagccacaggtgattcaggagtatgaatcaggcaaggca 474 Query: 508 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 567 || || ||| | ||||| ||| | |||||||||||||| || ||| | ||| ||||| || Sbjct: 475 atccccaaccagcagatcattagcaagctcgagagggccctgggaaccaagttgcgtggc 534 Query: 568 aagaa 572 ||||| Sbjct: 535 aagaa 539
>gb|AY103611.1| Zea mays PCO106667 mRNA sequence Length = 964 Score = 335 bits (169), Expect = 1e-88 Identities = 361/425 (84%) Strand = Plus / Plus Query: 148 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 207 ||||| ||||| || ||| |||||||||||||||||||| | || |||||||||| ||| Sbjct: 240 atggccgggatcggaccgatcaggcaggactgggagccggtcgttgtgcggaagaaggca 299 Query: 208 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 267 | | |||||| | ||||||||| || |||||||||||||| || |||||| |||| || Sbjct: 300 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcgcgccgcgccggtgcg 359 Query: 268 gagatcgacaccaccaagaagtataacgctggaacgaacaaggctgcatctagcggaact 327 |||||||| |||| |||||||| |||||||| ||||||||||| ||||| ||||| || Sbjct: 360 gagatcgataccatgaagaagtacaacgctggtacgaacaaggcggcatccagcggtaca 419 Query: 328 tccctcaacaccaagcggctcgacgacgacactgagaacctttcccatgagcgtgtttca 387 ||||||||||||||||| |||||||||||||| || ||||| |||||||||| ||| || Sbjct: 420 tccctcaacaccaagcgcctcgacgacgacaccgaaaacctcgcccatgagcgagttcca 479 Query: 388 agcgacctgaagaaaaaccttatgcaagcaaggctggataagaagatgacccaggcacaa 447 || || |||||||| || || |||||||||||||| ||||||||| |||| ||||||||| Sbjct: 480 agtgatctgaagaagaatctcatgcaagcaaggctcgataagaagctgacacaggcacaa 539 Query: 448 cttgctcagatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcg 507 |||||||||||||| |||||||||||||||||||| |||||||| || || |||||||| Sbjct: 540 cttgctcagatgataaatgagaagccacaggtgattcaggagtatgaatcaggcaaggca 599 Query: 508 attccgaacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagc 567 || || ||| | ||||| ||| | |||||||||||||| || ||| | ||| ||||| || Sbjct: 600 atccccaaccagcagatcattagcaagctcgagagggccctgggaaccaagttgcgtggc 659 Query: 568 aagaa 572 ||||| Sbjct: 660 aagaa 664
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 148 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 207 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 16975143 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 16975202 Query: 208 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 267 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 16975203 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 16975262 Query: 268 gagatcgacaccaccaagaagt 289 |||||||| |||| ||||||| Sbjct: 16975263 gagatcgagaccatgaagaagt 16975284 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Plus Query: 374 atgagcgtgtttcaagcgacctgaagaaaaaccttatgcaagcaaggctggataagaaga 433 |||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 16977414 atgagcgtgtctcaagtgacctgaagaaaaacctcatgcaagcaaggctggacaagaaga 16977473 Query: 434 tgacccaggcacaacttgc 452 ||||||||||||| ||||| Sbjct: 16977474 tgacccaggcacagcttgc 16977492 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 454 cagatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcgattccg 513 |||||||||||||||||||| ||||||||||||||||||||||| || || || |||||| Sbjct: 16977607 cagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagctattccg 16977666 Query: 514 aacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagcaagaa 572 ||| | ||||| || || ||||| || ||||| |||||| | |||||||| ||||||| Sbjct: 16977667 aaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggcaagaa 16977725 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 290 ataacgctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcg 349 ||||||||||||| |||||||| || || || || || |||||||||||||||||||| | Sbjct: 16975682 ataacgctggaacaaacaaggcggcgtccagtggcacatccctcaacaccaagcggctgg 16975741 Query: 350 acgacgacactgagaacctttcccatgag 378 | |||||||| |||| |||| ||| |||| Sbjct: 16975742 atgacgacaccgagagccttgcccgtgag 16975770
>dbj|AP004663.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0410E02 Length = 144294 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 148 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 207 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 10660 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 10719 Query: 208 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 267 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 10720 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 10779 Query: 268 gagatcgacaccaccaagaagt 289 |||||||| |||| ||||||| Sbjct: 10780 gagatcgagaccatgaagaagt 10801 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Plus Query: 374 atgagcgtgtttcaagcgacctgaagaaaaaccttatgcaagcaaggctggataagaaga 433 |||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 12931 atgagcgtgtctcaagtgacctgaagaaaaacctcatgcaagcaaggctggacaagaaga 12990 Query: 434 tgacccaggcacaacttgc 452 ||||||||||||| ||||| Sbjct: 12991 tgacccaggcacagcttgc 13009 Score = 101 bits (51), Expect = 2e-18 Identities = 102/119 (85%) Strand = Plus / Plus Query: 454 cagatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcgattccg 513 |||||||||||||||||||| ||||||||||||||||||||||| || || || |||||| Sbjct: 13124 cagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagctattccg 13183 Query: 514 aacaatcagataattggaaagctcgagagggcacttggagctaagctgcgtagcaagaa 572 ||| | ||||| || || ||||| || ||||| |||||| | |||||||| ||||||| Sbjct: 13184 aaccagcagatcatcgggaagcttgaaagggctcttggaacaaagctgcgcggcaagaa 13242 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 290 ataacgctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcg 349 ||||||||||||| |||||||| || || || || || |||||||||||||||||||| | Sbjct: 11199 ataacgctggaacaaacaaggcggcgtccagtggcacatccctcaacaccaagcggctgg 11258 Query: 350 acgacgacactgagaacctttcccatgag 378 | |||||||| |||| |||| ||| |||| Sbjct: 11259 atgacgacaccgagagccttgcccgtgag 11287
>dbj|AP003913.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1484_G09 Length = 124695 Score = 147 bits (74), Expect = 5e-32 Identities = 125/142 (88%) Strand = Plus / Plus Query: 148 atggctgggattggtccgctcaggcaggactgggagccgatagtggtgcggaagagggcc 207 ||||| |||||||||||| |||||||||||||||||||| | ||||||||||||| ||| Sbjct: 122154 atggccgggattggtccgatcaggcaggactgggagccggtggtggtgcggaagaaggcg 122213 Query: 208 cagaacgccgcggacaagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgcc 267 | | |||||| | ||||||||| || |||||||||||||| |||||||||||||||||| Sbjct: 122214 cccaccgccgccgccaagaaggatgagaaggccgtcaacgccgcccgccgctccggcgcc 122273 Query: 268 gagatcgacaccaccaagaagt 289 |||||||| |||| ||||||| Sbjct: 122274 gagatcgagaccatgaagaagt 122295 Score = 117 bits (59), Expect = 4e-23 Identities = 74/79 (93%) Strand = Plus / Plus Query: 374 atgagcgtgtttcaagcgacctgaagaaaaaccttatgcaagcaaggctggataagaaga 433 |||||||||| ||||| ||||||||||||||||| ||||||||||||||||| ||||||| Sbjct: 124425 atgagcgtgtctcaagtgacctgaagaaaaacctcatgcaagcaaggctggacaagaaga 124484 Query: 434 tgacccaggcacaacttgc 452 ||||||||||||| ||||| Sbjct: 124485 tgacccaggcacagcttgc 124503 Score = 85.7 bits (43), Expect = 1e-13 Identities = 58/63 (92%) Strand = Plus / Plus Query: 454 cagatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcgattccg 513 |||||||||||||||||||| ||||||||||||||||||||||| || || || |||||| Sbjct: 124618 cagatgatcaatgagaagccccaggtgatccaggagtacgagtcaggtaaagctattccg 124677 Query: 514 aac 516 ||| Sbjct: 124678 aac 124680 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 290 ataacgctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcg 349 ||||||||||||| |||||||| || || || || || |||||||||||||||||||| | Sbjct: 122693 ataacgctggaacaaacaaggcggcgtccagtggcacatccctcaacaccaagcggctgg 122752 Query: 350 acgacgacactgagaacctttcccatgag 378 | |||||||| |||| |||| ||| |||| Sbjct: 122753 atgacgacaccgagagccttgcccgtgag 122781
>gb|AY084597.1| Arabidopsis thaliana clone 112835 mRNA, complete sequence Length = 726 Score = 89.7 bits (45), Expect = 9e-15 Identities = 222/281 (79%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||| |||||||||||||||| ||||| || ||| | ||||| ||| ||| || || Sbjct: 239 gctggatcgaacaaggctgcatcaagcggcacctccttgaacacaaagaagctagatgat 298 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 || ||||||||| | || ||||| ||||| | | || |||||||| | | |||||| Sbjct: 299 gatactgagaacttatctcatgatcgtgtgcccactgaattgaagaaagccatcatgcaa 358 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || || ||| |||||| |||| ||| | |||||||| || ||||||||||||||||| Sbjct: 359 gctagaggggagaagaagctgactcagtcccaacttgcccatctgatcaatgagaagcca 418 Query: 475 caggtgatccaggagtacgagtcgggcaaggcgattccgaacaatcagataattggaaag 534 || |||||||| || ||||||||||| || || |||||||| | ||||| || |||| Sbjct: 419 caagtgatccaagaatacgagtcggggaaagcaattccgaatcaacagatcctttcaaag 478 Query: 535 ctcgagagggcacttggagctaagctgcgtagcaagaagta 575 || |||||||||||||| ||||| || ||| | |||||||| Sbjct: 479 ctggagagggcacttggtgctaaactccgtggaaagaagta 519
>gb|AC147741.11| Medicago truncatula clone mth2-17b23, complete sequence Length = 110572 Score = 87.7 bits (44), Expect = 4e-14 Identities = 80/92 (86%) Strand = Plus / Plus Query: 409 atgcaagcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgag 468 |||||| | ||| |||| |||||| | || ||||||||||||||||| || |||| |||| Sbjct: 36912 atgcaaactaggatggacaagaagcttactcaggcacaacttgctcaaattatcagtgag 36971 Query: 469 aagccacaggtgatccaggagtacgagtcggg 500 ||||| || ||||||||||||||||||||||| Sbjct: 36972 aagcctcaagtgatccaggagtacgagtcggg 37003
>ref|NM_115730.2| Arabidopsis thaliana DNA binding / transcription coactivator AT3G58680 mRNA, complete cds Length = 799 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||| |||||||||||||||| ||||| || ||| | ||||| ||| ||| || || Sbjct: 239 gctggatcgaacaaggctgcatcaagcggcacctccttgaacacaaagaagctagatgat 298 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 || ||||||||| | || ||||| ||||| | | || |||||||| | | |||||| Sbjct: 299 gatactgagaacttatctcatgatcgtgtgcccactgaattgaagaaagccatcatgcaa 358 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || || ||| |||||| |||| ||| | |||||||| || ||||||||||||||||| Sbjct: 359 gctagaggggagaagaagctgactcagtcccaacttgcccatctgatcaatgagaagcca 418 Query: 475 caggtgatccaggagtacgagtcgggcaaggcgattccgaacaatcagataattggaaag 534 || |||||||| || |||||||| || || || |||||||| | ||||| || |||| Sbjct: 419 caagtgatccaagaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaag 478 Query: 535 ctcgagagggcacttggagctaagctgcgtagcaagaagta 575 || |||||||||||||| ||||| || ||| | |||||||| Sbjct: 479 ctggagagggcacttggtgctaaactccgtggaaagaagta 519
>gb|AF339728.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 479 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||| |||||||||||||||| ||||| || ||| | ||||| ||| ||| || || Sbjct: 148 gctggatcgaacaaggctgcatcaagcggcacctccttgaacacaaagaagctagatgat 207 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 || ||||||||| | || ||||| ||||| | | || |||||||| | | |||||| Sbjct: 208 gatactgagaacttatctcatgatcgtgtgcccactgaattgaagaaagccatcatgcaa 267 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || || ||| |||||| |||| ||| | |||||||| || ||||||||||||||||| Sbjct: 268 gctagaggggagaagaagctgactcagtcccaacttgcccatctgatcaatgagaagcca 327 Query: 475 caggtgatccaggagtacgagtcgggcaaggcgattccgaacaatcagataattggaaag 534 || |||||||| || |||||||| || || || |||||||| | ||||| || |||| Sbjct: 328 caagtgatccaagaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaag 387 Query: 535 ctcgagagggcacttggagctaagctgcgtagcaagaagta 575 || |||||||||||||| ||||| || ||| | |||||||| Sbjct: 388 ctggagagggcacttggtgctaaactccgtggaaagaagta 428
>gb|AF326909.1| Arabidopsis thaliana putative transcriptional coactivator protein (At3g58680) mRNA, complete cds Length = 741 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||| |||||||||||||||| ||||| || ||| | ||||| ||| ||| || || Sbjct: 239 gctggatcgaacaaggctgcatcaagcggcacctccttgaacacaaagaagctagatgat 298 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 || ||||||||| | || ||||| ||||| | | || |||||||| | | |||||| Sbjct: 299 gatactgagaacttatctcatgatcgtgtgcccactgaattgaagaaagccatcatgcaa 358 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || || ||| |||||| |||| ||| | |||||||| || ||||||||||||||||| Sbjct: 359 gctagaggggagaagaagctgactcagtcccaacttgcccatctgatcaatgagaagcca 418 Query: 475 caggtgatccaggagtacgagtcgggcaaggcgattccgaacaatcagataattggaaag 534 || |||||||| || |||||||| || || || |||||||| | ||||| || |||| Sbjct: 419 caagtgatccaagaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaag 478 Query: 535 ctcgagagggcacttggagctaagctgcgtagcaagaagta 575 || |||||||||||||| ||||| || ||| | |||||||| Sbjct: 479 ctggagagggcacttggtgctaaactccgtggaaagaagta 519
>gb|AY081487.1| Arabidopsis thaliana transcriptional coactivator-like protein (At3g58680) mRNA, complete cds Length = 607 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||| |||||||||||||||| ||||| || ||| | ||||| ||| ||| || || Sbjct: 148 gctggatcgaacaaggctgcatcaagcggcacctccttgaacacaaagaagctagatgat 207 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 || ||||||||| | || ||||| ||||| | | || |||||||| | | |||||| Sbjct: 208 gatactgagaacttatctcatgatcgtgtgcccactgaattgaagaaagccatcatgcaa 267 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || || ||| |||||| |||| ||| | |||||||| || ||||||||||||||||| Sbjct: 268 gctagaggggagaagaagctgactcagtcccaacttgcccatctgatcaatgagaagcca 327 Query: 475 caggtgatccaggagtacgagtcgggcaaggcgattccgaacaatcagataattggaaag 534 || |||||||| || |||||||| || || || |||||||| | ||||| || |||| Sbjct: 328 caagtgatccaagaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaag 387 Query: 535 ctcgagagggcacttggagctaagctgcgtagcaagaagta 575 || |||||||||||||| ||||| || ||| | |||||||| Sbjct: 388 ctggagagggcacttggtgctaaactccgtggaaagaagta 428
>gb|AY042850.1| Arabidopsis thaliana transcriptional coactivator-like protein (T20N10_30) mRNA, complete cds Length = 724 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||| |||||||||||||||| ||||| || ||| | ||||| ||| ||| || || Sbjct: 239 gctggatcgaacaaggctgcatcaagcggcacctccttgaacacaaagaagctagatgat 298 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 || ||||||||| | || ||||| ||||| | | || |||||||| | | |||||| Sbjct: 299 gatactgagaacttatctcatgatcgtgtgcccactgaattgaagaaagccatcatgcaa 358 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || || ||| |||||| |||| ||| | |||||||| || ||||||||||||||||| Sbjct: 359 gctagaggggagaagaagctgactcagtcccaacttgcccatctgatcaatgagaagcca 418 Query: 475 caggtgatccaggagtacgagtcgggcaaggcgattccgaacaatcagataattggaaag 534 || |||||||| || |||||||| || || || |||||||| | ||||| || |||| Sbjct: 419 caagtgatccaagaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaag 478 Query: 535 ctcgagagggcacttggagctaagctgcgtagcaagaagta 575 || |||||||||||||| ||||| || ||| | |||||||| Sbjct: 479 ctggagagggcacttggtgctaaactccgtggaaagaagta 519
>gb|AF324717.2|AF324717 Arabidopsis thaliana AT3g58680 (AT3g58680/T20N10_30) mRNA, complete cds Length = 779 Score = 81.8 bits (41), Expect = 2e-12 Identities = 221/281 (78%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||| |||||||||||||||| ||||| || ||| | ||||| ||| ||| || || Sbjct: 293 gctggatcgaacaaggctgcatcaagcggcacctccttgaacacaaagaagctagatgat 352 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 || ||||||||| | || ||||| ||||| | | || |||||||| | | |||||| Sbjct: 353 gatactgagaacttatctcatgatcgtgtgcccactgaattgaagaaagccatcatgcaa 412 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || || ||| |||||| |||| ||| | |||||||| || ||||||||||||||||| Sbjct: 413 gctagaggggagaagaagctgactcagtcccaacttgcccatctgatcaatgagaagcca 472 Query: 475 caggtgatccaggagtacgagtcgggcaaggcgattccgaacaatcagataattggaaag 534 || |||||||| || |||||||| || || || |||||||| | ||||| || |||| Sbjct: 473 caagtgatccaagaatacgagtctgggaaagcaattccgaatcaacagatcctttcaaag 532 Query: 535 ctcgagagggcacttggagctaagctgcgtagcaagaagta 575 || |||||||||||||| ||||| || ||| | |||||||| Sbjct: 533 ctggagagggcacttggtgctaaactccgtggaaagaagta 573
>dbj|AB072698.1| Nicotiana tabacum NtMBF1a mRNA for putative multiprotein bridging factor 1, complete cds Length = 703 Score = 81.8 bits (41), Expect = 2e-12 Identities = 77/89 (86%) Strand = Plus / Plus Query: 424 gataagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatc 483 ||||||||| |||||||||| |||||||| ||| |||| ||||||||||| || | ||| Sbjct: 335 gataagaagctgacccaggctcaacttgcccagttgataaatgagaagcctcaaatcatc 394 Query: 484 caggagtacgagtcgggcaaggcgattcc 512 |||||||| ||||| || ||||||||||| Sbjct: 395 caggagtatgagtctggaaaggcgattcc 423 Score = 46.1 bits (23), Expect = 0.13 Identities = 38/43 (88%) Strand = Plus / Plus Query: 238 gccgtcaacgctgcccgccgctccggcgccgagatcgacacca 280 ||||||||||| ||||| |||||||| || |||||||| |||| Sbjct: 149 gccgtcaacgccgcccgtcgctccggtgctgagatcgaaacca 191
>emb|AL353032.1|ATT20N10 Arabidopsis thaliana DNA chromosome 3, BAC clone T20N10 Length = 90273 Score = 75.8 bits (38), Expect = 1e-10 Identities = 98/118 (83%) Strand = Plus / Plus Query: 458 tgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaaggcgattccgaaca 517 ||||||||||||||||||| |||||||| || |||||||| || || || |||||||| Sbjct: 8362 tgatcaatgagaagccacaagtgatccaagaatacgagtctgggaaagcaattccgaatc 8421 Query: 518 atcagataattggaaagctcgagagggcacttggagctaagctgcgtagcaagaagta 575 | ||||| || |||||| |||||||||||||| ||||| || ||| | |||||||| Sbjct: 8422 aacagatcctttcaaagctggagagggcacttggtgctaaactccgtggaaagaagta 8479 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcgg 323 |||||| |||||||||||||||| ||||| Sbjct: 7803 gctggatcgaacaaggctgcatcaagcgg 7831
>ref|NM_129829.2| Arabidopsis thaliana DNA binding / transcription coactivator AT2G42680 mRNA, complete cds Length = 692 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||||| |||||||| ||||| ||||| || || || ||||| || ||| || || Sbjct: 217 gctggaaccaacaaggcggcatcaagcggcacatctctgaacacaaaaatgcttgatgat 276 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 ||||||||||||||| | ||||| ||||| | | || || |||||| | |||||||| Sbjct: 277 gacactgagaaccttactcatgaacgtgtgcctactgagctaaagaaagccattatgcaa 336 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || ||| || |||||| | |||||| | ||||||||||| || ||||||||||||||| Sbjct: 337 gccaggacagacaagaagctaacccagtcccaacttgctcaaatcatcaatgagaagcca 396 Query: 475 caggtgatccaggagtacgagtcgggcaa 503 || ||||| || ||||| ||||| ||||| Sbjct: 397 caagtgattcaagagtatgagtctggcaa 425
>gb|AY063014.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 460 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||||| |||||||| ||||| ||||| || || || ||||| || ||| || || Sbjct: 148 gctggaaccaacaaggcggcatcaagcggcacatctctgaacacaaaaatgcttgatgat 207 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 ||||||||||||||| | ||||| ||||| | | || || |||||| | |||||||| Sbjct: 208 gacactgagaaccttactcatgaacgtgtgcctactgagctaaagaaagccattatgcaa 267 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || ||| || |||||| | |||||| | ||||||||||| || ||||||||||||||| Sbjct: 268 gccaggacagacaagaagctaacccagtcccaacttgctcaaatcatcaatgagaagcca 327 Query: 475 caggtgatccaggagtacgagtcgggcaa 503 || ||||| || ||||| ||||| ||||| Sbjct: 328 caagtgattcaagagtatgagtctggcaa 356
>gb|AF370280.1| Arabidopsis thaliana unknown protein (At2g42680) mRNA, complete cds Length = 703 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||||| |||||||| ||||| ||||| || || || ||||| || ||| || || Sbjct: 212 gctggaaccaacaaggcggcatcaagcggcacatctctgaacacaaaaatgcttgatgat 271 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 ||||||||||||||| | ||||| ||||| | | || || |||||| | |||||||| Sbjct: 272 gacactgagaaccttactcatgaacgtgtgcctactgagctaaagaaagccattatgcaa 331 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || ||| || |||||| | |||||| | ||||||||||| || ||||||||||||||| Sbjct: 332 gccaggacagacaagaagctaacccagtcccaacttgctcaaatcatcaatgagaagcca 391 Query: 475 caggtgatccaggagtacgagtcgggcaa 503 || ||||| || ||||| ||||| ||||| Sbjct: 392 caagtgattcaagagtatgagtctggcaa 420
>emb|BX819434.1|CNS0A8ZZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB77ZD12 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 688 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||||| |||||||| ||||| ||||| || || || ||||| || ||| || || Sbjct: 203 gctggaaccaacaaggcggcatcaagcggcacatctctaaacacaaaaatgcttgatgat 262 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 ||||||||||||||| | ||||| ||||| | | || || |||||| | |||||||| Sbjct: 263 gacactgagaaccttactcatgaacgtgtgcctactgagctaaagaaagccattatgcaa 322 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || ||| || |||||| | |||||| | ||||||||||| || ||||||||||||||| Sbjct: 323 gccaggacagacaagaagctaacccagtcccaacttgctcaaatcatcaatgagaagcca 382 Query: 475 caggtgatccaggagtacgagtcgggcaa 503 || ||||| || ||||| ||||| ||||| Sbjct: 383 caagtgattcaagagtatgagtctggcaa 411
>gb|AY088140.1| Arabidopsis thaliana clone 41712 mRNA, complete sequence Length = 675 Score = 73.8 bits (37), Expect = 6e-10 Identities = 166/209 (79%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcggaacttccctcaacaccaagcggctcgacgac 354 |||||||| |||||||| ||||| ||||| || || || ||||| || ||| || || Sbjct: 217 gctggaaccaacaaggcggcatcaagcggcacatctctgaacacaaaaatgcttgatgat 276 Query: 355 gacactgagaacctttcccatgagcgtgtttcaagcgacctgaagaaaaaccttatgcaa 414 ||||||||||||||| | ||||| ||||| | | || || |||||| | |||||||| Sbjct: 277 gacactgagaaccttactcatgaacgtgtgcctactgagctaaagaaagccattatgcaa 336 Query: 415 gcaaggctggataagaagatgacccaggcacaacttgctcagatgatcaatgagaagcca 474 || ||| || |||||| | |||||| | ||||||||||| || ||||||||||||||| Sbjct: 337 gccaggacagacaagaagctaacccagtcccaacttgctcaaatcatcaatgagaagcca 396 Query: 475 caggtgatccaggagtacgagtcgggcaa 503 || ||||| || ||||| ||||| ||||| Sbjct: 397 caagtgattcaagagtatgagtctggcaa 425
>gb|AF232062.1|AF232062 Solanum tuberosum multiprotein bridging factor 1 mRNA, complete cds Length = 626 Score = 73.8 bits (37), Expect = 6e-10 Identities = 85/101 (84%) Strand = Plus / Plus Query: 427 aagaagatgacccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccag 486 |||||| |||| ||| | ||||||||||| |||| ||||||||||||||| | ||||| Sbjct: 294 aagaagctgactcagtctcaacttgctcaattgataaatgagaagccacagattatccaa 353 Query: 487 gagtacgagtcgggcaaggcgattccgaacaatcagataat 527 || ||||||||||| ||||| ||||| ||| | |||||||| Sbjct: 354 gaatacgagtcgggaaaggcaattccaaaccaacagataat 394 Score = 52.0 bits (26), Expect = 0.002 Identities = 35/38 (92%) Strand = Plus / Plus Query: 238 gccgtcaacgctgcccgccgctccggcgccgagatcga 275 ||||| ||||| ||||| |||||||||||||||||||| Sbjct: 105 gccgttaacgccgcccgtcgctccggcgccgagatcga 142
>emb|BX826065.1|CNS0A4ZW Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL82ZF11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 671 Score = 61.9 bits (31), Expect = 2e-06 Identities = 98/119 (82%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 458 tgatcaatgagaagccacaggtgatccaggagtacgagtc-gggcaaggcgattccgaac 516 ||||||||||||||||||| |||||||| || |||||||| | | || || |||||||| Sbjct: 378 tgatcaatgagaagccacaagtgatccaagaatacgagtctgtggaaagcaattccgaat 437 Query: 517 aatcagataattggaaagctcgagagggcacttggagctaagctgcgtagcaagaagta 575 | ||||| || |||||| |||||||||||||| ||||| || ||| | |||||||| Sbjct: 438 caacagatcctttcaaagctggagagggcacttggtgctaaactccgtggaaagaagta 496 Score = 42.1 bits (21), Expect = 2.0 Identities = 27/29 (93%) Strand = Plus / Plus Query: 295 gctggaacgaacaaggctgcatctagcgg 323 |||||| |||||||||||||||| ||||| Sbjct: 214 gctggatcgaacaaggctgcatcaagcgg 242
>emb|Z49698.1|RCJS21MR R.communis mRNA (unknown) Length = 674 Score = 56.0 bits (28), Expect = 1e-04 Identities = 49/56 (87%) Strand = Plus / Plus Query: 436 acccaggcacaacttgctcagatgatcaatgagaagccacaggtgatccaggagta 491 |||||||| || |||||||||||||||||||| ||||| ||| | ||||| ||||| Sbjct: 335 acccaggctcagcttgctcagatgatcaatgaaaagccccagataatccaagagta 390 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 223 aagaaggacgaaaaggccgtcaacgctgcccgccgctccggcgccgagatcga 275 ||||||||||| |||| |||||||||||| || ||| | || ||||||||||| Sbjct: 122 aagaaggacgagaaggtcgtcaacgctgctcgtcgcgctggtgccgagatcga 174
>gb|AC007087.7| Arabidopsis thaliana chromosome 2 clone F14N22 map mi551, complete sequence Length = 96685 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 455 agatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaa 503 |||| ||||||||||||||||| ||||| || ||||| ||||| ||||| Sbjct: 9832 agatcatcaatgagaagccacaagtgattcaagagtatgagtctggcaa 9784
>gb|AC006931.6| Arabidopsis thaliana chromosome 2 clone F7D19 map m551, complete sequence Length = 115310 Score = 50.1 bits (25), Expect = 0.008 Identities = 43/49 (87%) Strand = Plus / Minus Query: 455 agatgatcaatgagaagccacaggtgatccaggagtacgagtcgggcaa 503 |||| ||||||||||||||||| ||||| || ||||| ||||| ||||| Sbjct: 105751 agatcatcaatgagaagccacaagtgattcaagagtatgagtctggcaa 105703
>gb|BC015500.1| Homo sapiens endothelial differentiation-related factor 1, transcript variant alpha, mRNA (cDNA clone MGC:9058 IMAGE:3903539), complete cds Length = 658 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 323 atcaatgagaagccacaggtgatc 346
>ref|NM_153200.1| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant beta, mRNA Length = 538 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 323 atcaatgagaagccacaggtgatc 346
>ref|NM_003792.2| Homo sapiens endothelial differentiation-related factor 1 (EDF1), transcript variant alpha, mRNA Length = 658 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 323 atcaatgagaagccacaggtgatc 346
>emb|AL355987.31| Human DNA sequence from clone RP11-216L13 on chromosome 9 Contains the 3' end of the gene for a novel protein similar to mouse pancreatitis-induced protein 49 (PIP49), the 5' end of a novel gene (FLJ30346), five novel genes (containing LOC158062, KIAA1984, FLJ35320, FLJ36901, FLJ30985, FLJ10101, FLJ37063 FLJ13045, FLJ40767), a nucleolin (NCL) pseudogene, the gene for a novel protein similar to mouse lipocalin 8 (EP17, Lcn5), a 13kD lysosomal H+ transporting ATPase V1 subunit G isoform 1 (ATP6V1G1) pseudogene, the gene for phosphohistidine phosphatase (PHP14), the gene for a novel protein similar to rat apical early endosomal glycoprotein (LOC252882), the EDF1 gene for endothelial differentiation-related factor 1 (MBF1, EDF-1), the 5' end of the TRAF2 gene for TNF receptor-associated factor 2 (TRAP, TRAP3) and ten CpG islands, complete sequence Length = 182003 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Minus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 141481 atcaatgagaagccacaggtgatc 141458
>gb|BT009863.1| Homo sapiens endothelial differentiation-related factor 1 mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>emb|CR541914.1| Homo sapiens full open reading frame cDNA clone RZPDo834G0633D for gene EDF1, endothelial differentiation-related factor 1; complete cds, without stopcodon Length = 444 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>emb|AJ005259.1|HSAJ5259 Homo sapiens mRNA for EDF-1 protein Length = 981 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 329 atcaatgagaagccacaggtgatc 352
>gb|AY888864.1| Synthetic construct Homo sapiens clone FLH109977.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>gb|AY888863.1| Synthetic construct Homo sapiens clone FLH109976.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>gb|AY888862.1| Synthetic construct Homo sapiens clone FLH109972.01X endothelial differentiation-related factor 1 (EDF1) mRNA, complete cds Length = 447 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>dbj|AB002283.2| Homo sapiens mRNA for hMBF1beta, complete cds Length = 538 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 332 atcaatgagaagccacaggtgatc 355
>gb|AY893963.1| Synthetic construct Homo sapiens clone FLH130861.01L endothelial differentiation-related factor 1 (EDF1) mRNA, partial cds Length = 447 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 295 atcaatgagaagccacaggtgatc 318
>dbj|AB002282.1| Homo sapiens mRNA for hMBF1alpha, complete cds Length = 636 Score = 48.1 bits (24), Expect = 0.032 Identities = 24/24 (100%) Strand = Plus / Plus Query: 460 atcaatgagaagccacaggtgatc 483 |||||||||||||||||||||||| Sbjct: 332 atcaatgagaagccacaggtgatc 355
>gb|AY509992.1| Malus x domestica cultivar Royal Gala sucrose phosphate phosphatase mRNA, complete cds Length = 1631 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 353 acgacactgagaacctttccc 373 ||||||||||||||||||||| Sbjct: 202 acgacactgagaacctttccc 222
>gb|AY223810.1| Rhodococcus erythropolis linear plasmid pBD2, complete sequence Length = 210205 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 264 cgccgagatcgacaccaccaa 284 ||||||||||||||||||||| Sbjct: 188853 cgccgagatcgacaccaccaa 188873
>gb|AE008743.2| Salmonella typhimurium LT2, section 49 of 220 of the complete genome Length = 62027 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 cggcgccgagatcgacaccaccaag 285 ||||||||||| ||||||||||||| Sbjct: 2374 cggcgccgagagcgacaccaccaag 2350
>emb|AL627268.1| Salmonella enterica serovar Typhi (Salmonella typhi) strain CT18, complete chromosome; segment 4/20 Length = 294050 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 cggcgccgagatcgacaccaccaag 285 ||||||||||| ||||||||||||| Sbjct: 238701 cggcgccgagagcgacaccaccaag 238677
>gb|AC084072.13| Mus musculus strain 129S6/SvEvTac clone rp22-511i2, complete sequence Length = 114579 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 atcagggagatatggctgggattgg 161 |||||||||||||||||||| |||| Sbjct: 56945 atcagggagatatggctgggtttgg 56969
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 250 gcccgccgctccggcgccgag 270 ||||||||||||||||||||| Sbjct: 874543 gcccgccgctccggcgccgag 874563
>gb|CP000026.1| Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC 9150 Length = 4585229 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 261 cggcgccgagatcgacaccaccaag 285 ||||||||||| ||||||||||||| Sbjct: 1865300 cggcgccgagagcgacaccaccaag 1865324
>gb|AE014613.1| Salmonella enterica subsp. enterica serovar Typhi Ty2, complete genome Length = 4791961 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 261 cggcgccgagatcgacaccaccaag 285 ||||||||||| ||||||||||||| Sbjct: 1983376 cggcgccgagagcgacaccaccaag 1983400
>gb|AE017220.1| Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67, complete genome Length = 4755700 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 261 cggcgccgagatcgacaccaccaag 285 ||||||||||| ||||||||||||| Sbjct: 1072454 cggcgccgagagcgacaccaccaag 1072430
>emb|BX072536.4| Mouse DNA sequence from clone RP23-5A21 on chromosome X, complete sequence Length = 246587 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 137 atcagggagatatggctgggattgg 161 |||||||||||||||||||| |||| Sbjct: 22581 atcagggagatatggctgggtttgg 22605
>ref|XM_365829.1| Magnaporthe grisea 70-15 hypothetical protein (MG10049.4) partial mRNA Length = 654 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 251 cccgccgctccggcgccgag 270 |||||||||||||||||||| Sbjct: 395 cccgccgctccggcgccgag 376
>ref|XM_878913.1| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 3 (LOC532674), mRNA Length = 5573 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gctcaggcaggactgggagc 184 |||||||||||||||||||| Sbjct: 82 gctcaggcaggactgggagc 63
>ref|XM_611824.2| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 1 (LOC532674), mRNA Length = 5390 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gctcaggcaggactgggagc 184 |||||||||||||||||||| Sbjct: 82 gctcaggcaggactgggagc 63
>ref|XM_866654.1| PREDICTED: Bos taurus similar to G-protein coupled receptor 116, transcript variant 2 (LOC532674), mRNA Length = 5453 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 165 gctcaggcaggactgggagc 184 |||||||||||||||||||| Sbjct: 82 gctcaggcaggactgggagc 63
>gb|AC140316.3| Mus musculus BAC clone RP23-419L10 from chromosome 18, complete sequence Length = 195911 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 33 aaatatctcccctctctctc 52 |||||||||||||||||||| Sbjct: 48419 aaatatctcccctctctctc 48438
>gb|AC004921.2| Homo sapiens PAC clone RP5-899E9 from 7, complete sequence Length = 150332 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 gaagaaaaaccttatgcaag 415 |||||||||||||||||||| Sbjct: 126435 gaagaaaaaccttatgcaag 126454
>gb|CP000319.1| Nitrobacter hamburgensis X14, complete genome Length = 4406967 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 tgggagccgatagtggtgcg 197 |||||||||||||||||||| Sbjct: 1007031 tgggagccgatagtggtgcg 1007050
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome Length = 4892717 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 264 cgccgagatcgacaccacca 283 |||||||||||||||||||| Sbjct: 136976 cgccgagatcgacaccacca 136957
>gb|AC133540.2| Homo sapiens chromosome 16 clone LA16c-352F7, complete sequence Length = 40695 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 396 gaagaaaaaccttatgcaag 415 |||||||||||||||||||| Sbjct: 2498 gaagaaaaaccttatgcaag 2479
>gb|AC115870.18| Mus musculus chromosome 1, clone RP24-339L17, complete sequence Length = 186963 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccctcaacaccaagcggct 347 |||||||||||||||||||| Sbjct: 44292 tccctcaacaccaagcggct 44273
>gb|AC092377.3| Homo sapiens chromosome 16 clone RP11-680G10, complete sequence Length = 207283 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 396 gaagaaaaaccttatgcaag 415 |||||||||||||||||||| Sbjct: 8383 gaagaaaaaccttatgcaag 8402
>gb|AC024094.28| Homo sapiens 4 RP11-193M13 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 161973 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Minus Query: 38 tctcccctctctctctagcgcctg 61 |||||||||||||||||| ||||| Sbjct: 20172 tctcccctctctctctagtgcctg 20149
>gb|AC147874.3| Monodelphis domestica clone VMRC6-639B11, complete sequence Length = 132290 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ccaaaatatctcccctctct 49 |||||||||||||||||||| Sbjct: 3875 ccaaaatatctcccctctct 3894
>gb|AF127374.1|AF127374 Streptomyces lavendulae LinA homolog, cytochrome P450 hydroxylase ORF4, cytochrome P450 hydroxylase ORF3, MitT (mitT), MitS (mitS), MitR (mitR), MitQ (mitQ), MitP (mitP), MitO (mitO), MitN (mitN), MitM (mitM), MitL (mitL), MitK (mitK), MitJ (mitJ), MitI (mitI), MitH (mitH), MitG (mitG), MitF (mitF), MitE (mitE), MitD (mitD), MitC (mitC), MitB (mitB), MitA (mitA), MmcA (mmcA), MmcB (mmcB), MmcC (mmcC), MmcD (mmcD), MmcE (mmcE), MmcF (mmcF), MmcG (mmcG), MmcH (mmcH), MmcI (mmcI), MmcJ (mmcJ), MmcK (mmcK), MmcL (mmcL), MmcM (mmcM), MmcN (mmcN), MmcO (mmcO), Mrd (mrd), MmcP (mmcP), MmcQ (mmcQ), MmcR (mmcR), MmcS (mmcS), MmcT (mmcT), MmcU (mmcU), MmcV (mmcV), Mct (mct), MmcW (mmcW), MmcX (mmcX), and MmcY (mmcY) genes, complete cds; and unknown genes Length = 63734 Score = 40.1 bits (20), Expect = 7.8 Identities = 23/24 (95%) Strand = Plus / Plus Query: 246 cgctgcccgccgctccggcgccga 269 ||||||||||| |||||||||||| Sbjct: 7228 cgctgcccgcccctccggcgccga 7251
>gb|AC153595.27| Mus musculus 6 BAC RP23-140J24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 225736 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 32 aaaatatctcccctctctct 51 |||||||||||||||||||| Sbjct: 13133 aaaatatctcccctctctct 13152
>gb|L05438.1|MUSIGFBP03 Mouse insulin-like growth factor binding protein 2 (IGFBP-2) gene, exon 3 Length = 425 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Minus Query: 328 tccctcaacaccaagcggct 347 |||||||||||||||||||| Sbjct: 140 tccctcaacaccaagcggct 121
>gb|DP000021.1| Monodelphis domestica target 1 genomic scaffold Length = 1833844 Score = 40.1 bits (20), Expect = 7.8 Identities = 20/20 (100%) Strand = Plus / Plus Query: 30 ccaaaatatctcccctctct 49 |||||||||||||||||||| Sbjct: 1048407 ccaaaatatctcccctctct 1048426 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,170,459 Number of Sequences: 3902068 Number of extensions: 4170459 Number of successful extensions: 79498 Number of sequences better than 10.0: 71 Number of HSP's better than 10.0 without gapping: 71 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79043 Number of HSP's gapped (non-prelim): 447 length of query: 576 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 553 effective length of database: 17,143,297,704 effective search space: 9480243630312 effective search space used: 9480243630312 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
