ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal33f16 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT017484.1| Zea mays clone EL01N0412C09.c mRNA sequence Length = 1014 Score = 527 bits (266), Expect = e-146 Identities = 529/614 (86%), Gaps = 2/614 (0%) Strand = Plus / Plus Query: 22 agggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaa 81 |||||||||||||||||||||||||||| | || |||||||||||||| ||||||||||| Sbjct: 187 agggtaaatgggatcagaagggccttcagttgtcactgtccatgttactggatttaagaa 246 Query: 82 gtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcat 141 ||| ||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | Sbjct: 247 gttccatggggttgctgagaacccaaccgagaaaattgtgaccaatcttaaatctttctt 306 Query: 142 tgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagc 201 |||||| |||||||||||||||||||||| || |||||||| | ||||||||||||| Sbjct: 307 ggaaaagcgagggttgccaaaaaatcttgtcctcggaagctgcacagttctcgaaacagc 366 Query: 202 cgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagaga 261 ||| | ||||| |||| ||| ||||||| |||||||| ||||| ||||||| |||| Sbjct: 367 aggggaaggggcacttgccacattatataaggttttagagtctgctgttgcagacagag- 425 Query: 262 gaac-gggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcg 320 |||| ||||| || || ||||| ||| | |||||| |||||||||||||||||||||||| Sbjct: 426 gaactgggtcctcggcacagggacaagtaatttggatccactttggggtcaacagtggcg 485 Query: 321 catcacggtttgctcttgagaatcaagctgtgaatgaagccaccttccgctgcccagatg 380 || | ||||||| |||||||| |||||||| ||||| || |||||||| || ||||||| Sbjct: 486 caataaggtttgcccttgagaaccaagctgttaatgaggctaccttccggtgtccagatg 545 Query: 381 agcttgggtggaagcctcagagagtccctattgttccatctgacggaagcatctcacgga 440 |||| || ||||| || ||||| ||||||||||| || ||||| |||||||||||||||| Sbjct: 546 agctaggatggaaaccacagagggtccctattgtgccctctgatggaagcatctcacgga 605 Query: 441 caagagagactacactgccagtgaaagagttaaccaagtcactccgaaagacaggctacg 500 | ||||||||||| |||||||| || || ||||||||||||||||| |||| |||||||| Sbjct: 606 cgagagagactaccctgccagtcaatgaattaaccaagtcactccggaagataggctacg 665 Query: 501 atgtgatgccttcggatgacgccgggcggttcgtgtgcaactatgtgtactaccactctc 560 | ||| |||| || | |||||||| ||||| || |||||||| |||||||||||||||| Sbjct: 666 acgtggtgccctccggcgacgccggtcggtttgtatgcaactacgtgtactaccactctc 725 Query: 561 tccggttcgcggagcagcacggcatcaagtctctgtttgtgcatgtgcccctcttctcga 620 | |||||||||||||| ||||||||||| || ||||| |||||||| |||||||||| || Sbjct: 726 ttcggttcgcggagcaacacggcatcaaatccctgttcgtgcatgttcccctcttcttga 785 Query: 621 cagtcgacgaggag 634 | ||||||||||| Sbjct: 786 cgatcgacgaggag 799
>ref|XM_479284.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1227 Score = 509 bits (257), Expect = e-141 Identities = 524/613 (85%) Strand = Plus / Plus Query: 22 agggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaa 81 |||||||||||| |||||||| |||||| | || |||||||||||||||||||||||||| Sbjct: 303 agggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaagaa 362 Query: 82 gtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcat 141 ||| ||||| |||||||||||||| || |||||| ||||| |||| ||||||| ||| | Sbjct: 363 gttccatggggttgctgagaacccaactgagaaaattgtgggcaatcttaaatcattcgt 422 Query: 142 tgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagc 201 ||||||| ||| ||||| ||||| ||||||||||||||||| | | || ||||| || Sbjct: 423 agaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactgc 482 Query: 202 cgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagaga 261 ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| ||||| Sbjct: 483 agggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagaga 542 Query: 262 gaacgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcgc 321 ||| |||||||| |||||||||||| | |||||| |||| ||||| || || ||||| || Sbjct: 543 gaatgggtcatcggctcaggggcaagtaatttggatccattttggagttaatagtggtgc 602 Query: 322 atcacggtttgctcttgagaatcaagctgtgaatgaagccaccttccgctgcccagatga 381 | || ||||||||||||||||||| ||||| || |||||||||||||| || |||||||| Sbjct: 603 aacaaggtttgctcttgagaatcaggctgttaacgaagccaccttccgttgtccagatga 662 Query: 382 gcttgggtggaagcctcagagagtccctattgttccatctgacggaagcatctcacggac 441 ||| |||||||| |||||||| || |||||||| ||||| || ||| |||||||||||| Sbjct: 663 gctagggtggaaacctcagagggttcctattgtaccatcggatggagccatctcacggac 722 Query: 442 aagagagactacactgccagtgaaagagttaaccaagtcactccgaaagacaggctacga 501 |||||||||||| || || || || ||||| |||||||||||||| |||||||||||||| Sbjct: 723 aagagagactacgcttccggtaaatgagttgaccaagtcactccggaagacaggctacga 782 Query: 502 tgtgatgccttcggatgacgccgggcggttcgtgtgcaactatgtgtactaccactctct 561 ||| ||||| || || || || || ||||| || |||||||||||||| || || ||||| Sbjct: 783 tgtaatgccatcagacgatgctggtcggtttgtatgcaactatgtgtattatcattctct 842 Query: 562 ccggttcgcggagcagcacggcatcaagtctctgtttgtgcatgtgcccctcttctcgac 621 |||||||| ||||| ||||||||||| ||||||||||| ||||||||||| |||| ||| Sbjct: 843 tcggttcgcagagcaacacggcatcaaatctctgtttgtacatgtgcccctgttcttgac 902 Query: 622 agtcgacgaggag 634 |||| |||||| Sbjct: 903 gatcgatgaggag 915
>dbj|AK105043.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-038-A05, full insert sequence Length = 1012 Score = 504 bits (254), Expect = e-139 Identities = 521/610 (85%) Strand = Plus / Plus Query: 25 gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 84 ||||||||| |||||||| |||||| | || ||||| ||||| || |||||||||||||| Sbjct: 230 gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 289 Query: 85 tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 144 |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | || Sbjct: 290 tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 349 Query: 145 aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 204 ||||| ||| ||||||||||| ||||| ||||||||||| | |||| ||||| || || Sbjct: 350 aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 409 Query: 205 gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 264 ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || ||||| Sbjct: 410 gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 469 Query: 265 cgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcgcatc 324 |||||||| |||||||||||| | |||||| |||||||||| ||||| ||||| ||| | Sbjct: 470 tgggtcatcggctcaggggcaagtaatttggatccactttggagtcaatagtggtgcaac 529 Query: 325 acggtttgctcttgagaatcaagctgtgaatgaagccaccttccgctgcccagatgagct 384 | ||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct: 530 aaggtttgctcttgagaatcaagctgttaatgaagccaccttccgttgtccagatgagct 589 Query: 385 tgggtggaagcctcagagagtccctattgttccatctgacggaagcatctcacggacaag 444 |||||||| |||||||| | || ||||| |||||||| ||| | |||||||| ||||| Sbjct: 590 agggtggaaacctcagagggctcccattgtgccatctgatggaggaatctcacgcacaag 649 Query: 445 agagactacactgccagtgaaagagttaaccaagtcactccgaaagacaggctacgatgt 504 ||||||||| || || || || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 650 agagactacccttccggtaaatgagttaaccaagtcactccggaagacaggctatgatgt 709 Query: 505 gatgccttcggatgacgccgggcggttcgtgtgcaactatgtgtactaccactctctccg 564 ||||| || || || || || |||||||| |||||||||||||| || |||||| | || Sbjct: 710 aatgccatcagacgatgctggtcggttcgtatgcaactatgtgtattatcactcttttcg 769 Query: 565 gttcgcggagcagcacggcatcaagtctctgtttgtgcatgtgcccctcttctcgacagt 624 ||| || ||||| ||||||||||| ||||||||||| ||||||||||| |||| ||| | Sbjct: 770 gtttgcagagcaacacggcatcaaatctctgtttgtacatgtgcccctgttcttgacgat 829 Query: 625 cgacgaggag 634 ||| |||||| Sbjct: 830 cgatgaggag 839
>dbj|AK060069.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-305-H12, full insert sequence Length = 1012 Score = 504 bits (254), Expect = e-139 Identities = 521/610 (85%) Strand = Plus / Plus Query: 25 gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 84 ||||||||| |||||||| |||||| | || ||||| ||||| || |||||||||||||| Sbjct: 230 gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 289 Query: 85 tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 144 |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | || Sbjct: 290 tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 349 Query: 145 aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 204 ||||| ||| ||||||||||| ||||| ||||||||||| | |||| ||||| || || Sbjct: 350 aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 409 Query: 205 gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 264 ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || ||||| Sbjct: 410 gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 469 Query: 265 cgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcgcatc 324 |||||||| |||||||||||| | |||||| |||||||||| ||||| ||||| ||| | Sbjct: 470 tgggtcatcggctcaggggcaagtaatttggatccactttggagtcaatagtggtgcaac 529 Query: 325 acggtttgctcttgagaatcaagctgtgaatgaagccaccttccgctgcccagatgagct 384 | ||||||||||||||||||||||||| ||||||||||||||||| || ||||||||||| Sbjct: 530 aaggtttgctcttgagaatcaagctgttaatgaagccaccttccgttgtccagatgagct 589 Query: 385 tgggtggaagcctcagagagtccctattgttccatctgacggaagcatctcacggacaag 444 |||||||| |||||||| | || ||||| |||||||| ||| | |||||||| ||||| Sbjct: 590 agggtggaaacctcagagggctcccattgtgccatctgatggaggaatctcacgcacaag 649 Query: 445 agagactacactgccagtgaaagagttaaccaagtcactccgaaagacaggctacgatgt 504 ||||||||| || || || || |||||||||||||||||||| ||||||||||| ||||| Sbjct: 650 agagactacccttccggtaaatgagttaaccaagtcactccggaagacaggctatgatgt 709 Query: 505 gatgccttcggatgacgccgggcggttcgtgtgcaactatgtgtactaccactctctccg 564 ||||| || || || || || |||||||| |||||||||||||| || |||||| | || Sbjct: 710 aatgccatcagacgatgctggtcggttcgtatgcaactatgtgtattatcactcttttcg 769 Query: 565 gttcgcggagcagcacggcatcaagtctctgtttgtgcatgtgcccctcttctcgacagt 624 ||| || ||||| ||||||||||| ||||||||||| ||||||||||| |||| ||| | Sbjct: 770 gtttgcagagcaacacggcatcaaatctctgtttgtacatgtgcccctgttcttgacgat 829 Query: 625 cgacgaggag 634 ||| |||||| Sbjct: 830 cgatgaggag 839
>dbj|AK067207.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013096M06, full insert sequence Length = 1228 Score = 502 bits (253), Expect = e-139 Identities = 523/613 (85%) Strand = Plus / Plus Query: 22 agggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaa 81 |||||||||||| |||||||| |||||| | || |||||||||||||||||||||||||| Sbjct: 304 agggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaagaa 363 Query: 82 gtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcat 141 ||| ||||| |||||||||||||| || |||||| ||| | |||| ||||||| ||| | Sbjct: 364 gttccatggggttgctgagaacccaactgagaaaattgagggcaatcttaaatcattcgt 423 Query: 142 tgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagc 201 ||||||| ||| ||||| ||||| ||||||||||||||||| | | || ||||| || Sbjct: 424 agaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactgc 483 Query: 202 cgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagaga 261 ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| ||||| Sbjct: 484 agggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagaga 543 Query: 262 gaacgggtcatcagctcaggggcaaattatttgggtccactttggggtcaacagtggcgc 321 ||| |||||||| |||||||||||| | |||||| |||| ||||| || || ||||| || Sbjct: 544 gaatgggtcatcggctcaggggcaagtaatttggatccattttggagttaatagtggtgc 603 Query: 322 atcacggtttgctcttgagaatcaagctgtgaatgaagccaccttccgctgcccagatga 381 | || ||||||||||||||||||| ||||| || |||||||||||||| || |||||||| Sbjct: 604 aacaaggtttgctcttgagaatcaggctgttaacgaagccaccttccgttgtccagatga 663 Query: 382 gcttgggtggaagcctcagagagtccctattgttccatctgacggaagcatctcacggac 441 ||| |||||||| |||||||| || |||||||| ||||| || ||| |||||||||||| Sbjct: 664 gctagggtggaaacctcagagggttcctattgtaccatcggatggagccatctcacggac 723 Query: 442 aagagagactacactgccagtgaaagagttaaccaagtcactccgaaagacaggctacga 501 |||||||||||| || || || || ||||| |||||||||||||| |||||||||||||| Sbjct: 724 aagagagactacgcttccggtaaatgagttgaccaagtcactccggaagacaggctacga 783 Query: 502 tgtgatgccttcggatgacgccgggcggttcgtgtgcaactatgtgtactaccactctct 561 ||| ||||| || || || || || ||||| || |||||||||||||| || || ||||| Sbjct: 784 tgtaatgccatcagacgatgctggtcggtttgtatgcaactatgtgtattatcattctct 843 Query: 562 ccggttcgcggagcagcacggcatcaagtctctgtttgtgcatgtgcccctcttctcgac 621 |||||||| ||||| ||||||||||| ||||||||||| ||||||||||| |||| ||| Sbjct: 844 tcggttcgcagagcaacacggcatcaaatctctgtttgtacatgtgcccctgttcttgac 903 Query: 622 agtcgacgaggag 634 |||| |||||| Sbjct: 904 gatcgatgaggag 916
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 246 bits (124), Expect = 7e-62 Identities = 238/276 (86%) Strand = Plus / Minus Query: 22 agggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaa 81 |||||||||||| |||||||| |||||| | || |||||||||||||||||||||||||| Sbjct: 26566892 agggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaagaa 26566833 Query: 82 gtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcat 141 ||| ||||| |||||||||||||| || |||||| ||||| |||| ||||||| ||| | Sbjct: 26566832 gttccatggggttgctgagaacccaactgagaaaattgtgggcaatcttaaatcattcgt 26566773 Query: 142 tgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagc 201 ||||||| ||| ||||| ||||| ||||||||||||||||| | | || ||||| || Sbjct: 26566772 agaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactgc 26566713 Query: 202 cgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagaga 261 ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| ||||| Sbjct: 26566712 agggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagaga 26566653 Query: 262 gaacgggtcatcagctcaggggcaaattatttgggt 297 ||| |||||||| |||||||||||| | |||||||| Sbjct: 26566652 gaatgggtcatcggctcaggggcaagtaatttgggt 26566617 Score = 143 bits (72), Expect = 8e-31 Identities = 144/168 (85%) Strand = Plus / Minus Query: 467 gagttaaccaagtcactccgaaagacaggctacgatgtgatgccttcggatgacgccggg 526 ||||| |||||||||||||| ||||||||||||||||| ||||| || || || || || Sbjct: 26565560 gagttgaccaagtcactccggaagacaggctacgatgtaatgccatcagacgatgctggt 26565501 Query: 527 cggttcgtgtgcaactatgtgtactaccactctctccggttcgcggagcagcacggcatc 586 ||||| || |||||||||||||| || || ||||| |||||||| ||||| ||||||||| Sbjct: 26565500 cggtttgtatgcaactatgtgtattatcattctcttcggttcgcagagcaacacggcatc 26565441 Query: 587 aagtctctgtttgtgcatgtgcccctcttctcgacagtcgacgaggag 634 || ||||||||||| ||||||||||| |||| ||| |||| |||||| Sbjct: 26565440 aaatctctgtttgtacatgtgcccctgttcttgacgatcgatgaggag 26565393 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 297 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 356 |||| ||||| || || ||||| ||| || ||||||||||||||||||| ||||| || | Sbjct: 26566455 tccattttggagttaatagtggtgcaacaaggtttgctcttgagaatcaggctgttaacg 26566396 Query: 357 aagccaccttccgctgcccagatgagcttgggtggaagcctcag 400 ||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 26566395 aagccaccttccgttgtccagatgagctagggtggaaacctcag 26566352 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 398 cagagagtccctattgttccatctgacggaagcatctcacggacaagagag 448 ||||| || |||||||| ||||| || ||| ||||||||||||||||||| Sbjct: 26566277 cagagggttcctattgtaccatcggatggagccatctcacggacaagagag 26566227
>dbj|AP005292.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1340_C08 Length = 192167 Score = 246 bits (124), Expect = 7e-62 Identities = 238/276 (86%) Strand = Plus / Minus Query: 22 agggtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaa 81 |||||||||||| |||||||| |||||| | || |||||||||||||||||||||||||| Sbjct: 112163 agggtaaatgggttcagaaggaccttcagttgttactgtccatgttaccggatttaagaa 112104 Query: 82 gtttcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcat 141 ||| ||||| |||||||||||||| || |||||| ||||| |||| ||||||| ||| | Sbjct: 112103 gttccatggggttgctgagaacccaactgagaaaattgtgggcaatcttaaatcattcgt 112044 Query: 142 tgaaaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagc 201 ||||||| ||| ||||| ||||| ||||||||||||||||| | | || ||||| || Sbjct: 112043 agaaaagaaaggattgccgaaaaaccttgtacttggaagctgcacagtgcttgaaactgc 111984 Query: 202 cgggcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagaga 261 ||||||||||| ||||| ||| ||||||| ||||| ||||||||||||||||| ||||| Sbjct: 111983 agggcagggggcacttggcacattatataaggttttggaatctgccattgcagaaagaga 111924 Query: 262 gaacgggtcatcagctcaggggcaaattatttgggt 297 ||| |||||||| |||||||||||| | |||||||| Sbjct: 111923 gaatgggtcatcggctcaggggcaagtaatttgggt 111888 Score = 143 bits (72), Expect = 8e-31 Identities = 144/168 (85%) Strand = Plus / Minus Query: 467 gagttaaccaagtcactccgaaagacaggctacgatgtgatgccttcggatgacgccggg 526 ||||| |||||||||||||| ||||||||||||||||| ||||| || || || || || Sbjct: 110831 gagttgaccaagtcactccggaagacaggctacgatgtaatgccatcagacgatgctggt 110772 Query: 527 cggttcgtgtgcaactatgtgtactaccactctctccggttcgcggagcagcacggcatc 586 ||||| || |||||||||||||| || || ||||| |||||||| ||||| ||||||||| Sbjct: 110771 cggtttgtatgcaactatgtgtattatcattctcttcggttcgcagagcaacacggcatc 110712 Query: 587 aagtctctgtttgtgcatgtgcccctcttctcgacagtcgacgaggag 634 || ||||||||||| ||||||||||| |||| ||| |||| |||||| Sbjct: 110711 aaatctctgtttgtacatgtgcccctgttcttgacgatcgatgaggag 110664 Score = 95.6 bits (48), Expect = 2e-16 Identities = 90/104 (86%) Strand = Plus / Minus Query: 297 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 356 |||| ||||| || || ||||| ||| || ||||||||||||||||||| ||||| || | Sbjct: 111726 tccattttggagttaatagtggtgcaacaaggtttgctcttgagaatcaggctgttaacg 111667 Query: 357 aagccaccttccgctgcccagatgagcttgggtggaagcctcag 400 ||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 111666 aagccaccttccgttgtccagatgagctagggtggaaacctcag 111623 Score = 46.1 bits (23), Expect = 0.14 Identities = 44/51 (86%) Strand = Plus / Minus Query: 398 cagagagtccctattgttccatctgacggaagcatctcacggacaagagag 448 ||||| || |||||||| ||||| || ||| ||||||||||||||||||| Sbjct: 111548 cagagggttcctattgtaccatcggatggagccatctcacggacaagagag 111498
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 224 bits (113), Expect = 3e-55 Identities = 233/273 (85%) Strand = Plus / Plus Query: 25 gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 84 ||||||||| |||||||| |||||| | || ||||| ||||| || |||||||||||||| Sbjct: 13760329 gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 13760388 Query: 85 tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 144 |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | || Sbjct: 13760389 tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 13760448 Query: 145 aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 204 ||||| ||| ||||||||||| ||||| ||||||||||| | |||| ||||| || || Sbjct: 13760449 aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 13760508 Query: 205 gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 264 ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || ||||| Sbjct: 13760509 gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 13760568 Query: 265 cgggtcatcagctcaggggcaaattatttgggt 297 |||||||| |||||||||||| | |||||||| Sbjct: 13760569 tgggtcatcggctcaggggcaagtaatttgggt 13760601 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 467 gagttaaccaagtcactccgaaagacaggctacgatgtgatgccttcggatgacgccggg 526 |||||||||||||||||||| ||||||||||| ||||| ||||| || || || || || Sbjct: 13761688 gagttaaccaagtcactccggaagacaggctatgatgtaatgccatcagacgatgctggt 13761747 Query: 527 cggttcgtgtgcaactatgtgtactaccactctctccggttcgcggagcagcacggcatc 586 |||||||| |||||||||||||| || |||||||| ||||| || ||||| ||||||||| Sbjct: 13761748 cggttcgtatgcaactatgtgtattatcactctcttcggtttgcagagcaacacggcatc 13761807 Query: 587 aagtctctgtttgtgcatgtgcccctcttctcgacagtcgacgaggag 634 || ||||||||||| ||||||||||| |||| ||| |||| |||||| Sbjct: 13761808 aaatctctgtttgtacatgtgcccctgttcttgacgatcgatgaggag 13761855 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 297 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 356 |||||||||| ||||| ||||| ||| || ||||||||||||||||||||||||| |||| Sbjct: 13760752 tccactttggagtcaatagtggtgcaacaaggtttgctcttgagaatcaagctgttaatg 13760811 Query: 357 aagccaccttccgctgcccagatgagcttgggtggaagcctcag 400 ||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 13760812 aagccaccttccgttgtccagatgagctagggtggaaacctcag 13760855
>dbj|AP005577.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1655_B12 Length = 132736 Score = 224 bits (113), Expect = 3e-55 Identities = 233/273 (85%) Strand = Plus / Plus Query: 25 gtaaatgggatcagaagggccttcaatcgtgactgtccatgttaccggatttaagaagtt 84 ||||||||| |||||||| |||||| | || ||||| ||||| || |||||||||||||| Sbjct: 9813 gtaaatgggttcagaaggaccttcagttgttactgtacatgtgactggatttaagaagtt 9872 Query: 85 tcatggagttgctgagaacccgacagagaaacttgtgaccaatattaaatccttcattga 144 |||||| |||||||||||||| || |||||| ||||||||||| ||||||| ||| | || Sbjct: 9873 tcatggggttgctgagaacccaactgagaaaattgtgaccaatcttaaatcattcgtgga 9932 Query: 145 aaagagagggttgccaaaaaatcttgtacttggaagctgtgaaattctcgaaacagccgg 204 ||||| ||| ||||||||||| ||||| ||||||||||| | |||| ||||| || || Sbjct: 9933 aaagaaaggattgccaaaaaaccttgtgcttggaagctgcacagttcttgaaactgcagg 9992 Query: 205 gcagggggcgcttggaacactatataaagttttagaatctgccattgcagatagagagaa 264 ||||||||| ||||| ||| ||||||| ||||| |||||| ||||||| || || ||||| Sbjct: 9993 gcagggggcacttggcacattatataaggttttggaatcttccattgcggaaagggagaa 10052 Query: 265 cgggtcatcagctcaggggcaaattatttgggt 297 |||||||| |||||||||||| | |||||||| Sbjct: 10053 tgggtcatcggctcaggggcaagtaatttgggt 10085 Score = 151 bits (76), Expect = 3e-33 Identities = 145/168 (86%) Strand = Plus / Plus Query: 467 gagttaaccaagtcactccgaaagacaggctacgatgtgatgccttcggatgacgccggg 526 |||||||||||||||||||| ||||||||||| ||||| ||||| || || || || || Sbjct: 11172 gagttaaccaagtcactccggaagacaggctatgatgtaatgccatcagacgatgctggt 11231 Query: 527 cggttcgtgtgcaactatgtgtactaccactctctccggttcgcggagcagcacggcatc 586 |||||||| |||||||||||||| || |||||||| ||||| || ||||| ||||||||| Sbjct: 11232 cggttcgtatgcaactatgtgtattatcactctcttcggtttgcagagcaacacggcatc 11291 Query: 587 aagtctctgtttgtgcatgtgcccctcttctcgacagtcgacgaggag 634 || ||||||||||| ||||||||||| |||| ||| |||| |||||| Sbjct: 11292 aaatctctgtttgtacatgtgcccctgttcttgacgatcgatgaggag 11339 Score = 127 bits (64), Expect = 5e-26 Identities = 94/104 (90%) Strand = Plus / Plus Query: 297 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 356 |||||||||| ||||| ||||| ||| || ||||||||||||||||||||||||| |||| Sbjct: 10236 tccactttggagtcaatagtggtgcaacaaggtttgctcttgagaatcaagctgttaatg 10295 Query: 357 aagccaccttccgctgcccagatgagcttgggtggaagcctcag 400 ||||||||||||| || ||||||||||| |||||||| |||||| Sbjct: 10296 aagccaccttccgttgtccagatgagctagggtggaaacctcag 10339
>dbj|AK099464.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013023I17, full insert sequence Length = 1114 Score = 119 bits (60), Expect = 1e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 297 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 356 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 485 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 544 Query: 357 aagccaccttccgctgcccagatgagcttgggtggaagcctcagagagtccctattgttc 416 |||| |||||||| ||||| |||||||| || ||||| || ||||| | ||||||||| Sbjct: 545 aagctaccttccgttgccctgatgagctgggatggaaaccacagagggcccctattgtgt 604 Query: 417 catctgacggaagcatctca 436 ||||||| |||||||||||| Sbjct: 605 catctgatggaagcatctca 624 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 494 ggctacgatgtgatgccttcggatgacgccgggcggttcgtgtgcaactatgtgtactac 553 |||| ||||||| ||||||||||||||| || || ||||| ||||||||||| || ||| Sbjct: 682 ggcttcgatgtggcgccttcggatgacgctggtcgattcgtatgcaactatgtctattac 741 Query: 554 cactctctccggttcgcggagcagcacggcatcaagtctctgtttgtgcatgtgcccctc 613 || ||||| ||||||| || |||| ||| ||||||||| |||| || ||| | |||||| Sbjct: 742 caatctcttaggttcgcagaacagcgcggtatcaagtctttgttcgtccatttccccctc 801 Query: 614 ttctcgac 621 ||| |||| Sbjct: 802 ttcacgac 809 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 65 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 124 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 253 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 312 Query: 125 aatattaaatccttcattgaaaagagagggttgcc 159 ||| || | || || || ||||||||||||||||| Sbjct: 313 aatcttgagtcatttatggaaaagagagggttgcc 347
>dbj|AK062116.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C05, full insert sequence Length = 1164 Score = 119 bits (60), Expect = 1e-23 Identities = 120/140 (85%) Strand = Plus / Plus Query: 297 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 356 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 547 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 606 Query: 357 aagccaccttccgctgcccagatgagcttgggtggaagcctcagagagtccctattgttc 416 |||| |||||||| ||||| |||||||| || ||||| || ||||| | ||||||||| Sbjct: 607 aagctaccttccgttgccctgatgagctgggatggaaaccacagagggcccctattgtgt 666 Query: 417 catctgacggaagcatctca 436 ||||||| |||||||||||| Sbjct: 667 catctgatggaagcatctca 686 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 494 ggctacgatgtgatgccttcggatgacgccgggcggttcgtgtgcaactatgtgtactac 553 |||| ||||||| ||||||||||||||| || || ||||| ||||||||||| || ||| Sbjct: 744 ggcttcgatgtggcgccttcggatgacgctggtcgattcgtatgcaactatgtctattac 803 Query: 554 cactctctccggttcgcggagcagcacggcatcaagtctctgtttgtgcatgtgcccctc 613 || ||||| ||||||| || |||| ||| ||||||||| |||| || ||| | |||||| Sbjct: 804 caatctcttaggttcgcagaacagcgcggtatcaagtctttgttcgtccatttccccctc 863 Query: 614 ttctcgac 621 ||| |||| Sbjct: 864 ttcacgac 871 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 65 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 124 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 315 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 374 Query: 125 aatattaaatccttcattgaaaagagagggttgcc 159 ||| || | || || || ||||||||||||||||| Sbjct: 375 aatcttgagtcatttatggaaaagagagggttgcc 409
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 297 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 356 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 14271886 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 14271945 Query: 357 aagccaccttccgctgcccagatgagcttgggtggaa 393 |||| |||||||| ||||| |||||||| || ||||| Sbjct: 14271946 aagctaccttccgttgccctgatgagctgggatggaa 14271982 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 494 ggctacgatgtgatgccttcggatgacgccgggcggttcgtgtgcaactatgtgtactac 553 |||| ||||||| ||||||||||||||| || || ||||| ||||||||||| || ||| Sbjct: 14272921 ggcttcgatgtggcgccttcggatgacgctggtcgattcgtatgcaactatgtctattac 14272980 Query: 554 cactctctccggttcgcggagcagcacggcatcaagtctctgtttgtgcatgtgcccctc 613 || ||||| ||||||| || |||| ||| ||||||||| |||| || ||| | |||||| Sbjct: 14272981 caatctcttaggttcgcagaacagcgcggtatcaagtctttgttcgtccatttccccctc 14273040 Query: 614 ttctcgac 621 ||| |||| Sbjct: 14273041 ttcacgac 14273048 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 65 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 124 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 14271347 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 14271406 Query: 125 aatattaaatccttcattgaaaagagagggttgcc 159 ||| || | || || || ||||||||||||||||| Sbjct: 14271407 aatcttgagtcatttatggaaaagagagggttgcc 14271441
>gb|AC082644.10| Oryza sativa chromosome 3 BAC OSJNBa0013M12 genomic sequence, complete sequence Length = 158714 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 297 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 356 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 21115 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 21174 Query: 357 aagccaccttccgctgcccagatgagcttgggtggaa 393 |||| |||||||| ||||| |||||||| || ||||| Sbjct: 21175 aagctaccttccgttgccctgatgagctgggatggaa 21211 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 494 ggctacgatgtgatgccttcggatgacgccgggcggttcgtgtgcaactatgtgtactac 553 |||| ||||||| ||||||||||||||| || || ||||| ||||||||||| || ||| Sbjct: 22150 ggcttcgatgtggcgccttcggatgacgctggtcgattcgtatgcaactatgtctattac 22209 Query: 554 cactctctccggttcgcggagcagcacggcatcaagtctctgtttgtgcatgtgcccctc 613 || ||||| ||||||| || |||| ||| ||||||||| |||| || ||| | |||||| Sbjct: 22210 caatctcttaggttcgcagaacagcgcggtatcaagtctttgttcgtccatttccccctc 22269 Query: 614 ttctcgac 621 ||| |||| Sbjct: 22270 ttcacgac 22277 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 65 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 124 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 20576 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 20635 Query: 125 aatattaaatccttcattgaaaagagagggttgcc 159 ||| || | || || || ||||||||||||||||| Sbjct: 20636 aatcttgagtcatttatggaaaagagagggttgcc 20670
>gb|AC144427.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNAb0012F18, complete sequence Length = 122159 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 297 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 356 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 83274 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 83333 Query: 357 aagccaccttccgctgcccagatgagcttgggtggaa 393 |||| |||||||| ||||| |||||||| || ||||| Sbjct: 83334 aagctaccttccgttgccctgatgagctgggatggaa 83370 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 494 ggctacgatgtgatgccttcggatgacgccgggcggttcgtgtgcaactatgtgtactac 553 |||| ||||||| ||||||||||||||| || || ||||| ||||||||||| || ||| Sbjct: 84309 ggcttcgatgtggcgccttcggatgacgctggtcgattcgtatgcaactatgtctattac 84368 Query: 554 cactctctccggttcgcggagcagcacggcatcaagtctctgtttgtgcatgtgcccctc 613 || ||||| ||||||| || |||| ||| ||||||||| |||| || ||| | |||||| Sbjct: 84369 caatctcttaggttcgcagaacagcgcggtatcaagtctttgttcgtccatttccccctc 84428 Query: 614 ttctcgac 621 ||| |||| Sbjct: 84429 ttcacgac 84436 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 65 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 124 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 82735 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 82794 Query: 125 aatattaaatccttcattgaaaagagagggttgcc 159 ||| || | || || || ||||||||||||||||| Sbjct: 82795 aatcttgagtcatttatggaaaagagagggttgcc 82829
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 89.7 bits (45), Expect = 1e-14 Identities = 84/97 (86%) Strand = Plus / Plus Query: 297 tccactttggggtcaacagtggcgcatcacggtttgctcttgagaatcaagctgtgaatg 356 |||| ||||| |||||||||||| || || ||||||| ||||||||||||||| | |||| Sbjct: 14266861 tccattttggagtcaacagtggcacaacaaggtttgcccttgagaatcaagctattaatg 14266920 Query: 357 aagccaccttccgctgcccagatgagcttgggtggaa 393 |||| |||||||| ||||| |||||||| || ||||| Sbjct: 14266921 aagctaccttccgttgccctgatgagctgggatggaa 14266957 Score = 79.8 bits (40), Expect = 1e-11 Identities = 106/128 (82%) Strand = Plus / Plus Query: 494 ggctacgatgtgatgccttcggatgacgccgggcggttcgtgtgcaactatgtgtactac 553 |||| ||||||| ||||||||||||||| || || ||||| ||||||||||| || ||| Sbjct: 14267896 ggcttcgatgtggcgccttcggatgacgctggtcgattcgtatgcaactatgtctattac 14267955 Query: 554 cactctctccggttcgcggagcagcacggcatcaagtctctgtttgtgcatgtgcccctc 613 || ||||| ||||||| || |||| ||| ||||||||| |||| || ||| | |||||| Sbjct: 14267956 caatctcttaggttcgcagaacagcgcggtatcaagtctttgttcgtccatttccccctc 14268015 Query: 614 ttctcgac 621 ||| |||| Sbjct: 14268016 ttcacgac 14268023 Score = 61.9 bits (31), Expect = 2e-06 Identities = 79/95 (83%) Strand = Plus / Plus Query: 65 gttaccggatttaagaagtttcatggagttgctgagaacccgacagagaaacttgtgacc 124 ||||| ||||| |||||||| |||||||| |||||||| ||||| ||||| ||||| | Sbjct: 14266322 gttactggattcaagaagttccatggagtcgctgagaatccgacggagaagattgtgcgc 14266381 Query: 125 aatattaaatccttcattgaaaagagagggttgcc 159 ||| || | || || || ||||||||||||||||| Sbjct: 14266382 aatcttgagtcatttatggaaaagagagggttgcc 14266416
>ref|XM_741731.1| Aspergillus fumigatus Af293 endo-1,4-beta-mannosidase (Afu7g01070) partial mRNA Length = 1434 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 569 gcggagcagcacggcatcaag 589 ||||||||||||||||||||| Sbjct: 673 gcggagcagcacggcatcaag 693
>gb|AC126605.4| Homo sapiens chromosome 15, clone RP11-606M5, complete sequence Length = 169125 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 aagctgtgaatgaagccacct 365 ||||||||||||||||||||| Sbjct: 62810 aagctgtgaatgaagccacct 62830
>gb|AC110291.6| Homo sapiens chromosome 15, clone RP11-379H8, complete sequence Length = 186812 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Minus Query: 345 aagctgtgaatgaagccacct 365 ||||||||||||||||||||| Sbjct: 99031 aagctgtgaatgaagccacct 99011
>gb|AC010724.6|AC010724 Homo sapiens BAC clone RP11-152F13 from 15, complete sequence Length = 157200 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 345 aagctgtgaatgaagccacct 365 ||||||||||||||||||||| Sbjct: 4408 aagctgtgaatgaagccacct 4428
>gb|AC040162.5| Homo sapiens chromosome 16 clone CTC-479C5, complete sequence Length = 217470 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 370 ctgcccagatgagcttgggtg 390 ||||||||||||||||||||| Sbjct: 204022 ctgcccagatgagcttgggtg 204042
>ref|NM_022675.1| Rattus norvegicus FK506 binding protein 1b (Fkbp1b), mRNA Length = 327 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cgctgcccagatgagcttggg 388 ||||||||||||||||||||| Sbjct: 189 cgctgcccagatgagcttggg 209
>dbj|D86642.1| Rattus norvegicus mRNA for FK506-binding protein 12.6, complete cds Length = 327 Score = 42.1 bits (21), Expect = 2.2 Identities = 21/21 (100%) Strand = Plus / Plus Query: 368 cgctgcccagatgagcttggg 388 ||||||||||||||||||||| Sbjct: 189 cgctgcccagatgagcttggg 209
>ref|XM_523138.1| PREDICTED: Pan troglodytes similar to cytoplasmic polyadenylation element-binding protein (CPEB) (LOC467743), mRNA Length = 2097 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 1254 agctgtgaatgaagccacct 1273
>ref|NM_030594.2| Homo sapiens cytoplasmic polyadenylation element binding protein 1 (CPEB1), mRNA Length = 2777 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 1175 agctgtgaatgaagccacct 1194
>ref|XM_874055.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S17, transcript variant 3 (LOC514174), mRNA Length = 2032 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 867 agctgtgaatgaagccacct 886
>ref|XM_864691.1| PREDICTED: Bos taurus similar to 40S ribosomal protein S17, transcript variant 2 (LOC514174), mRNA Length = 1970 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 877 agctgtgaatgaagccacct 896
>gb|AC125543.3| Mus musculus BAC clone RP23-360H5 from chromosome 12, complete sequence Length = 184081 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 290 atttgggtccactttggggt 309 |||||||||||||||||||| Sbjct: 69536 atttgggtccactttggggt 69517
>gb|BC050629.1| Homo sapiens cytoplasmic polyadenylation element binding protein 1, mRNA (cDNA clone MGC:60106 IMAGE:6047179), complete cds Length = 2117 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 965 agctgtgaatgaagccacct 984
>gb|BC035348.1| Homo sapiens cytoplasmic polyadenylation element binding protein 1, mRNA (cDNA clone MGC:34136 IMAGE:5195793), complete cds Length = 2080 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 886 agctgtgaatgaagccacct 905
>gb|AC165350.3| Mus musculus BAC clone RP23-249A17 from chromosome 12, complete sequence Length = 227048 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 atttgggtccactttggggt 309 |||||||||||||||||||| Sbjct: 182967 atttgggtccactttggggt 182986
>ref|XM_500170.1| Yarrowia lipolytica CLIB122, YALI0A17578g predicted mRNA Length = 3702 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 ggctacgatgtgatgccttc 513 |||||||||||||||||||| Sbjct: 2938 ggctacgatgtgatgccttc 2957
>emb|CR860287.1| Pongo pygmaeus mRNA; cDNA DKFZp459E225 (from clone DKFZp459E225) Length = 3328 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 1099 agctgtgaatgaagccacct 1118
>emb|AL845512.9| Zebrafish DNA sequence from clone CH211-286M4 in linkage group 4 Contains the gene for a novel protein similar to mouse and human F-box protein 7 (FBXO7), the gene for a novel protein similar to human exportin tRNA (nuclear export receptor for tRNAs) (XPOT), the gene for a novel protein similar to parathyroid hormone-like hormone (PTHLH), the 3' end of a novel gene, a novel gene and two CpG islands, complete sequence Length = 192940 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 221 acactatataaagttttaga 240 |||||||||||||||||||| Sbjct: 95755 acactatataaagttttaga 95736
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 242 tctgccattgcagatagaga 261 |||||||||||||||||||| Sbjct: 557576 tctgccattgcagatagaga 557557
>emb|CR591339.1| full-length cDNA clone CS0DC009YL21 of Neuroblastoma Cot 25-normalized of Homo sapiens (human) Length = 1567 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 480 agctgtgaatgaagccacct 499
>dbj|AK023265.1| Homo sapiens cDNA FLJ13203 fis, clone NT2RP3004504, highly similar to M.musculus mRNA for CPEB protein Length = 1923 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 798 agctgtgaatgaagccacct 817
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aagctgtgaaattctcgaaa 197 |||||||||||||||||||| Sbjct: 22431499 aagctgtgaaattctcgaaa 22431480
>gb|AC020604.9| Homo sapiens BAC clone RP11-536C12 from 2, complete sequence Length = 130506 Score = 40.1 bits (20), Expect = 8.6 Identities = 23/24 (95%) Strand = Plus / Minus Query: 285 aaattatttgggtccactttgggg 308 ||||||||||| |||||||||||| Sbjct: 19973 aaattatttggatccactttgggg 19950
>gb|AF329403.1|AF329403 Homo sapiens cytoplasmic polyadenylation element-binding protein short form (CPEB1) mRNA, complete cds Length = 2443 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 841 agctgtgaatgaagccacct 860
>gb|AF329402.1|AF329402 Homo sapiens cytoplasmic polyadenylation element-binding protein long form (CPEB1) mRNA, complete cds Length = 2777 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 1175 agctgtgaatgaagccacct 1194
>emb|BX649159.1|HSM809311 Homo sapiens mRNA; cDNA DKFZp686F0129 (from clone DKFZp686F0129) Length = 4973 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 2744 agctgtgaatgaagccacct 2763
>gb|AC134462.5| Mus musculus BAC clone RP23-391L12 from chromosome 12, complete sequence Length = 197870 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 atttgggtccactttggggt 309 |||||||||||||||||||| Sbjct: 141471 atttgggtccactttggggt 141490
>gb|AC102602.9| Mus musculus chromosome 9, clone RP23-381L11, complete sequence Length = 253504 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 588 agtctctgtttgtgcatgtg 607 |||||||||||||||||||| Sbjct: 186977 agtctctgtttgtgcatgtg 186958
>emb|AL832156.1|HSM803463 Homo sapiens mRNA; cDNA DKFZp686F2014 (from clone DKFZp686F2014) Length = 2900 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 346 agctgtgaatgaagccacct 365 |||||||||||||||||||| Sbjct: 666 agctgtgaatgaagccacct 685
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 aagctgtgaaattctcgaaa 197 |||||||||||||||||||| Sbjct: 22359844 aagctgtgaaattctcgaaa 22359825
>emb|AL732640.4|CNS08C9F Oryza sativa chromosome 12, . BAC OSJNBa0022K16 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 183414 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 178 aagctgtgaaattctcgaaa 197 |||||||||||||||||||| Sbjct: 76035 aagctgtgaaattctcgaaa 76054
>gb|AC130824.4| Mus musculus BAC clone RP23-349B5 from 12, complete sequence Length = 178133 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 290 atttgggtccactttggggt 309 |||||||||||||||||||| Sbjct: 99146 atttgggtccactttggggt 99165
>emb|AL954851.5| Zebrafish DNA sequence from clone CH211-280J3, complete sequence Length = 177221 Score = 40.1 bits (20), Expect = 8.6 Identities = 26/28 (92%) Strand = Plus / Minus Query: 590 tctctgtttgtgcatgtgcccctcttct 617 |||||||||||||||||| |||||||| Sbjct: 18116 tctctgtttgtgcatgtgaacctcttct 18089
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 494 ggctacgatgtgatgccttc 513 |||||||||||||||||||| Sbjct: 1816179 ggctacgatgtgatgccttc 1816198
>dbj|AP001578.3| Homo sapiens genomic DNA, chromosome 6q25.2, clone:KB1954F7 Length = 239057 Score = 40.1 bits (20), Expect = 8.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 126 atattaaatccttcattgaa 145 |||||||||||||||||||| Sbjct: 197532 atattaaatccttcattgaa 197551 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,956,269 Number of Sequences: 3902068 Number of extensions: 4956269 Number of successful extensions: 87507 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 50 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 87265 Number of HSP's gapped (non-prelim): 238 length of query: 634 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 611 effective length of database: 17,143,297,704 effective search space: 10474554897144 effective search space used: 10474554897144 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
