>YAAA_SCHPO (Q09801) Hypothetical protein C22G7.10 in chromosome I|
          Length = 344

 Score = 35.0 bits (79), Expect = 0.17
 Identities = 17/40 (42%), Positives = 21/40 (52%)
 Frame = +3

Query: 183 TDITSGYKEHSNAANSNQHICKEPSDNPEQSEQPKTEPNI 302
           T  TSG   HS AA  N ++   PS +  +SE P   PNI
Sbjct: 233 TTHTSGGGVHSGAATPNAYVNNNPSSSRRESESPANSPNI 272

>CKLF2_HUMAN (Q8TAZ6) CKLF-like MARVEL transmembrane domain-containing protein 2|
           (Chemokine-like factor superfamily member 2)
          Length = 248

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 19/49 (38%), Positives = 24/49 (48%)
 Frame = +3

Query: 165 PAAMGETDITSGYKEHSNAANSNQHICKEPSDNPEQSEQPKTEPNILKG 311
           P A  E D   G KE S+         KEPSD P+++ QPK E    +G
Sbjct: 20  PGAKPEEDKKDG-KEPSDKPQKAVQDHKEPSDKPQKAVQPKHEVGTRRG 67

>ESPC_ECO27 (Q9EZE7) Serine protease espC precursor (EC 3.4.21.-)|
           (EPEC-secreted protein C)
          Length = 1305

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 14/48 (29%), Positives = 23/48 (47%)
 Frame = +3

Query: 165 PAAMGETDITSGYKEHSNAANSNQHICKEPSDNPEQSEQPKTEPNILK 308
           P  + E D  SG ++  N+AN N +   + ++     EQP  E  + K
Sbjct: 581 PGVICEKDYVSGIQQQENSANKNNNTDYKTNNQVSSFEQPDWENRLFK 628

>SYH_METMP (P60921) Histidyl-tRNA synthetase (EC 6.1.1.21) (Histidine--tRNA|
           ligase) (HisRS)
          Length = 416

 Score = 26.2 bits (56), Expect(2) = 5.5
 Identities = 12/28 (42%), Positives = 18/28 (64%)
 Frame = +3

Query: 9   VVPVKSAQPVLVSCRHVDQDVHVEGKSV 92
           VVPVKS++ +L  C  + + +   GKSV
Sbjct: 331 VVPVKSSEMLLKECLKIAKTLRDSGKSV 358



 Score = 22.3 bits (46), Expect(2) = 5.5
 Identities = 10/39 (25%), Positives = 22/39 (56%)
 Frame = +1

Query: 202 TKNTQMLLIATNIFVRNHQITQNSLSNQRQSLTS*KELM 318
           TKN + +LI     +R+ +++  ++    QSL   K+++
Sbjct: 376 TKNIKKVLIVGENDIRDGKVSLKNMETGEQSLIELKDIL 414

>LRP1B_HUMAN (Q9NZR2) Low-density lipoprotein receptor-related protein 1B|
            precursor (Low-density lipoprotein receptor-related
            protein-deleted in tumor) (LRP-DIT)
          Length = 4599

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 18/50 (36%), Positives = 22/50 (44%), Gaps = 1/50 (2%)
 Frame = -3

Query: 563  C*SALGFNHPQKGTTLR*DSCKLGETA-*TKQQDLCCRCQPVFLAVNLQF 417
            C  ALGF  P  G T+  D C+ G T   T      C CQP +     Q+
Sbjct: 4273 CSCALGFTGPNCGKTVCEDFCQNGGTCIVTAGNQPYCHCQPEYTGDRCQY 4322


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,746,174
Number of Sequences: 219361
Number of extensions: 1197160
Number of successful extensions: 2661
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 2506
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2657
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)