| Clone Name | baal33f09 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK121800.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096P07, full insert sequence Length = 1341 Score = 349 bits (176), Expect = 7e-93 Identities = 373/438 (85%), Gaps = 3/438 (0%) Strand = Plus / Plus Query: 167 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 226 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 123 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 182 Query: 227 cctcgtccccgacgcgcaaggggatctcgcggatgtcgttcttgggttcgacaccctgga 286 | ||||||||||||| || ||| ||||||||||||| |||||||| |||||||| ||||| Sbjct: 183 catcgtccccgacgcccacgggaatctcgcggatgtggttcttggattcgacactctgga 242 Query: 287 gccgtacttgaaaggcatggcaccttattttggttgcatagttggccgagttgcaaatag 346 ||| ||| |||||||||| ||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 243 gccttacatgaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaatag 302 Query: 347 gatcaaggatgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgg 406 ||||||||| || |||||| |||||| ||||| |||||||| || ||||||| ||||| Sbjct: 303 gatcaaggagggaaagtttactctgaatggagttgagtattcactagctatcaataatgg 362 Query: 407 gccgaacagccttcatggtggattgaaggggtttgacaaggttgtgtgggatgttgtaga 466 || ||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 363 acccaacagtcttcatggtgggttgaaggggtttgacaaagtagtgtgggatgtagtaga 422 Query: 467 gcgtaaagatggcgagtacccatcaataaccttccagtatgagagcaaagatggcgaaga 526 ||| ||| | || | ||||||||| |||||||| ||| | ||||| ||||| ||||| Sbjct: 423 gcgcaaa---agtgaatgcccatcaatcaccttccaatatcacagcaaggatggggaaga 479 Query: 527 aggttaccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactct 586 || |||||||||||||| || | |||||||| || ||||||||||| ||||||| | Sbjct: 480 gggctaccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccacctt 539 Query: 587 aagacttgacatggaagc 604 |||||||||||||||||| Sbjct: 540 aagacttgacatggaagc 557
>dbj|AK061152.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-208-F01, full insert sequence Length = 1857 Score = 349 bits (176), Expect = 7e-93 Identities = 373/438 (85%), Gaps = 3/438 (0%) Strand = Plus / Plus Query: 167 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 226 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 630 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 689 Query: 227 cctcgtccccgacgcgcaaggggatctcgcggatgtcgttcttgggttcgacaccctgga 286 | ||||||||||||| || ||| ||||||||||||| |||||||| |||||||| ||||| Sbjct: 690 catcgtccccgacgcccacgggaatctcgcggatgtggttcttggattcgacactctgga 749 Query: 287 gccgtacttgaaaggcatggcaccttattttggttgcatagttggccgagttgcaaatag 346 ||| ||| |||||||||| ||||||||||||| ||||| |||||||| ||||||||||| Sbjct: 750 gccttacatgaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaatag 809 Query: 347 gatcaaggatgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgg 406 ||||||||| || |||||| |||||| ||||| |||||||| || ||||||| ||||| Sbjct: 810 gatcaaggagggaaagtttactctgaatggagttgagtattcactagctatcaataatgg 869 Query: 407 gccgaacagccttcatggtggattgaaggggtttgacaaggttgtgtgggatgttgtaga 466 || ||||| ||||||||||| ||||||||||||||||| || ||||||||||| ||||| Sbjct: 870 acccaacagtcttcatggtgggttgaaggggtttgacaaagtagtgtgggatgtagtaga 929 Query: 467 gcgtaaagatggcgagtacccatcaataaccttccagtatgagagcaaagatggcgaaga 526 ||| ||| | || | ||||||||| |||||||| ||| | ||||| ||||| ||||| Sbjct: 930 gcgcaaa---agtgaatgcccatcaatcaccttccaatatcacagcaaggatggggaaga 986 Query: 527 aggttaccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactct 586 || |||||||||||||| || | |||||||| || ||||||||||| ||||||| | Sbjct: 987 gggctaccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccacctt 1046 Query: 587 aagacttgacatggaagc 604 |||||||||||||||||| Sbjct: 1047 aagacttgacatggaagc 1064
>gb|AY110655.1| Zea mays CL9117_1 mRNA sequence Length = 1124 Score = 331 bits (167), Expect = 2e-87 Identities = 376/446 (84%) Strand = Plus / Minus Query: 167 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 226 ||||||||| |||| |||||| |||| ||| | |||||||||||||||||||||||||| Sbjct: 1109 gctctccaacggcaagatcaccgcgaggatctccaactggggcgccaccatcacctccct 1050 Query: 227 cctcgtccccgacgcgcaaggggatctcgcggatgtcgttcttgggttcgacaccctgga 286 || ||||||||||| || ||| | ||| |||| || ||||| ||||| | |||| Sbjct: 1049 tcttgtccccgacgcccaggggagtatcgttgatggggtgcttggattcgatggcttgga 990 Query: 287 gccgtacttgaaaggcatggcaccttattttggttgcatagttggccgagttgcaaatag 346 |||||| ||||||||||| ||||||||||||| |||||||||||||| || || ||||| Sbjct: 989 tccgtacgtgaaaggcatgtcaccttattttggctgcatagttggccgngtcgcgaatag 930 Query: 347 gatcaaggatgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgg 406 ||||||||||||||||||| || |||||| | |||||||| || |||||||||||||| Sbjct: 929 gatcaaggatgggaagtttacactaaacggacttgagtattcattgcctatcaacaatgg 870 Query: 407 gccgaacagccttcatggtggattgaaggggtttgacaaggttgtgtgggatgttgtaga 466 || ||||||||||||||||| |||||||| ||||| ||||| ||||||||||| || || Sbjct: 869 acctaacagccttcatggtgggttgaagggatttgataaggtcgtgtgggatgtcgtgga 810 Query: 467 gcgtaaagatggcgagtacccatcaataaccttccagtatgagagcaaagatggcgaaga 526 || ||||||||||| | ||| |||||||| || ||||| | ||||| || || ||||| Sbjct: 809 gcacaaagatggcgaatgcccttcaataacttttcagtaccacagcaaggacggggaaga 750 Query: 527 aggttaccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactct 586 ||| || || |||||||||||||| |||||||| || ||||||||||| ||||| ||||| Sbjct: 749 aggctatccaggcgatgtaaccattcgagcaacatactctcttcctgaagctactactct 690 Query: 587 aagacttgacatggaagctataccag 612 ||| |||||||||||||||| ||||| Sbjct: 689 aaggcttgacatggaagctacaccag 664
>ref|NM_194929.1| Oryza sativa (japonica cultivar-group) putative aldose 1-epimerase - like protein (OSJNAa0034B05.14), mRNA Length = 1032 Score = 228 bits (115), Expect = 2e-56 Identities = 261/309 (84%), Gaps = 3/309 (0%) Strand = Plus / Plus Query: 296 gaaaggcatggcaccttattttggttgcatagttggccgagttgcaaataggatcaagga 355 ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 183 gaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaataggatcaagga 242 Query: 356 tgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgggccgaacag 415 || |||||| |||||| ||||| |||||||| || ||||||| ||||| || ||||| Sbjct: 243 gggaaagtttactctgaatggagttgagtattcactagctatcaataatggacccaacag 302 Query: 416 ccttcatggtggattgaaggggtttgacaaggttgtgtgggatgttgtagagcgtaaaga 475 ||||||||||| ||||||||||||||||| || ||||||||||| |||||||| ||| Sbjct: 303 tcttcatggtgggttgaaggggtttgacaaagtagtgtgggatgtagtagagcgcaaa-- 360 Query: 476 tggcgagtacccatcaataaccttccagtatgagagcaaagatggcgaagaaggttaccc 535 | || | ||||||||| |||||||| ||| | ||||| ||||| ||||| || ||||| Sbjct: 361 -agtgaatgcccatcaatcaccttccaatatcacagcaaggatggggaagagggctaccc 419 Query: 536 tggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactctaagacttga 595 ||||||||| || | |||||||| || ||||||||||| ||||||| |||||||||| Sbjct: 420 tggcgatgtgactgttcgagcaacatactctcttcctgattctaccaccttaagacttga 479 Query: 596 catggaagc 604 ||||||||| Sbjct: 480 catggaagc 488 Score = 125 bits (63), Expect = 2e-25 Identities = 108/123 (87%) Strand = Plus / Plus Query: 167 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 226 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 24 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 83 Query: 227 cctcgtccccgacgcgcaaggggatctcgcggatgtcgttcttgggttcgacaccctgga 286 | ||||||||||||| || ||| ||||||||||||| |||||||| |||||||| ||||| Sbjct: 84 catcgtccccgacgcccacgggaatctcgcggatgtggttcttggattcgacactctgga 143 Query: 287 gcc 289 ||| Sbjct: 144 gcc 146
>gb|AC091724.3| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNBa0004E08, complete sequence Length = 158294 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 296 gaaaggcatggcaccttattttggttgcatagttggccgagttgcaaataggatcaagga 355 ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 47084 gaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaataggatcaagga 47025 Query: 356 tgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgggccgaacag 415 || |||||| |||||| ||||| |||||||| || ||||||| ||||| || ||||| Sbjct: 47024 gggaaagtttactctgaatggagttgagtattcactagctatcaataatggacccaacag 46965 Query: 416 ccttcatggt 425 ||||||||| Sbjct: 46964 tcttcatggt 46955 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 167 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 226 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 48212 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 48153 Query: 227 cctcgtccccgacgc 241 | ||||||||||||| Sbjct: 48152 catcgtccccgacgc 48138 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 531 taccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactctaaga 590 |||||||||||||| || | |||||||| || ||||||||||| ||||||| ||||| Sbjct: 46592 taccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccaccttaaga 46533 Query: 591 cttgacatggaagc 604 |||||||||||||| Sbjct: 46532 cttgacatggaagc 46519 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 423 ggtggattgaaggggtttgacaaggttgtgtgggatgttgtagagcg 469 ||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 46793 ggtgggttgaaggggtttgacaaagtagtgtgggatgtagtagagcg 46747 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 245 aggggatctcgcggatgtcgttcttgggttcgacaccctggagcc 289 |||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 48008 agggaatctcgcggatgtggttcttggattcgacactctggagcc 47964
>gb|AC122145.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0034B05, complete sequence Length = 125655 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 296 gaaaggcatggcaccttattttggttgcatagttggccgagttgcaaataggatcaagga 355 ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 112739 gaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaataggatcaagga 112680 Query: 356 tgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgggccgaacag 415 || |||||| |||||| ||||| |||||||| || ||||||| ||||| || ||||| Sbjct: 112679 gggaaagtttactctgaatggagttgagtattcactagctatcaataatggacccaacag 112620 Query: 416 ccttcatggt 425 ||||||||| Sbjct: 112619 tcttcatggt 112610 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 167 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 226 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 113867 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 113808 Query: 227 cctcgtccccgacgc 241 | ||||||||||||| Sbjct: 113807 catcgtccccgacgc 113793 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 531 taccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactctaaga 590 |||||||||||||| || | |||||||| || ||||||||||| ||||||| ||||| Sbjct: 112247 taccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccaccttaaga 112188 Query: 591 cttgacatggaagc 604 |||||||||||||| Sbjct: 112187 cttgacatggaagc 112174 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 423 ggtggattgaaggggtttgacaaggttgtgtgggatgttgtagagcg 469 ||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 112448 ggtgggttgaaggggtttgacaaagtagtgtgggatgtagtagagcg 112402 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 245 aggggatctcgcggatgtcgttcttgggttcgacaccctggagcc 289 |||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 113663 agggaatctcgcggatgtggttcttggattcgacactctggagcc 113619
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 296 gaaaggcatggcaccttattttggttgcatagttggccgagttgcaaataggatcaagga 355 ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 3455955 gaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaataggatcaagga 3455896 Query: 356 tgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgggccgaacag 415 || |||||| |||||| ||||| |||||||| || ||||||| ||||| || ||||| Sbjct: 3455895 gggaaagtttactctgaatggagttgagtattcactagctatcaataatggacccaacag 3455836 Query: 416 ccttcatggt 425 ||||||||| Sbjct: 3455835 tcttcatggt 3455826 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 167 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 226 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 3457083 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 3457024 Query: 227 cctcgtccccgacgc 241 | ||||||||||||| Sbjct: 3457023 catcgtccccgacgc 3457009 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 531 taccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactctaaga 590 |||||||||||||| || | |||||||| || ||||||||||| ||||||| ||||| Sbjct: 3455463 taccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccaccttaaga 3455404 Query: 591 cttgacatggaagc 604 |||||||||||||| Sbjct: 3455403 cttgacatggaagc 3455390 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 423 ggtggattgaaggggtttgacaaggttgtgtgggatgttgtagagcg 469 ||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 3455664 ggtgggttgaaggggtttgacaaagtagtgtgggatgtagtagagcg 3455618 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 245 aggggatctcgcggatgtcgttcttgggttcgacaccctggagcc 289 |||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 3456879 agggaatctcgcggatgtggttcttggattcgacactctggagcc 3456835
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 115 bits (58), Expect = 2e-22 Identities = 112/130 (86%) Strand = Plus / Minus Query: 296 gaaaggcatggcaccttattttggttgcatagttggccgagttgcaaataggatcaagga 355 ||||||||| ||||||||||||| ||||| |||||||| |||||||||||||||||||| Sbjct: 3455876 gaaaggcatatcaccttattttggatgcattgttggccgtgttgcaaataggatcaagga 3455817 Query: 356 tgggaagtttgatctgaacggagtagagtattcgttacctatcaacaatgggccgaacag 415 || |||||| |||||| ||||| |||||||| || ||||||| ||||| || ||||| Sbjct: 3455816 gggaaagtttactctgaatggagttgagtattcactagctatcaataatggacccaacag 3455757 Query: 416 ccttcatggt 425 ||||||||| Sbjct: 3455756 tcttcatggt 3455747 Score = 77.8 bits (39), Expect = 4e-11 Identities = 66/75 (88%) Strand = Plus / Minus Query: 167 gctctccaatggcaggatcacggcgaacatcgcaaactggggcgccaccatcacctccct 226 ||||||||||||| | ||||| || || ||||| |||||||||||||||||||||||| Sbjct: 3457004 gctctccaatggccgcatcaccgccaagatcgccgcctggggcgccaccatcacctccct 3456945 Query: 227 cctcgtccccgacgc 241 | ||||||||||||| Sbjct: 3456944 catcgtccccgacgc 3456930 Score = 67.9 bits (34), Expect = 4e-08 Identities = 64/74 (86%) Strand = Plus / Minus Query: 531 taccctggcgatgtaaccatccgagcaacgtattctcttcctgaggctaccactctaaga 590 |||||||||||||| || | |||||||| || ||||||||||| ||||||| ||||| Sbjct: 3455384 taccctggcgatgtgactgttcgagcaacatactctcttcctgattctaccaccttaaga 3455325 Query: 591 cttgacatggaagc 604 |||||||||||||| Sbjct: 3455324 cttgacatggaagc 3455311 Score = 61.9 bits (31), Expect = 2e-06 Identities = 43/47 (91%) Strand = Plus / Minus Query: 423 ggtggattgaaggggtttgacaaggttgtgtgggatgttgtagagcg 469 ||||| ||||||||||||||||| || ||||||||||| |||||||| Sbjct: 3455585 ggtgggttgaaggggtttgacaaagtagtgtgggatgtagtagagcg 3455539 Score = 58.0 bits (29), Expect = 4e-05 Identities = 41/45 (91%) Strand = Plus / Minus Query: 245 aggggatctcgcggatgtcgttcttgggttcgacaccctggagcc 289 |||| ||||||||||||| |||||||| |||||||| |||||||| Sbjct: 3456800 agggaatctcgcggatgtggttcttggattcgacactctggagcc 3456756
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 307 caccttattttggttgcatagttggccgagttgcaaataggatcaaggatgggaagttt 365 ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 767491 caccttattttggctgcattgttgggcgagttgcaaataggatcaaggatgggaagttt 767549
>dbj|AP005787.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0501E09 Length = 150604 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 307 caccttattttggttgcatagttggccgagttgcaaataggatcaaggatgggaagttt 365 ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 52830 caccttattttggctgcattgttgggcgagttgcaaataggatcaaggatgggaagttt 52888
>dbj|AP005591.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0584E12 Length = 159071 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 307 caccttattttggttgcatagttggccgagttgcaaataggatcaaggatgggaagttt 365 ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 140032 caccttattttggctgcattgttgggcgagttgcaaataggatcaaggatgggaagttt 140090
>dbj|AK063547.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-117-D04, full insert sequence Length = 1483 Score = 93.7 bits (47), Expect = 6e-16 Identities = 56/59 (94%) Strand = Plus / Plus Query: 307 caccttattttggttgcatagttggccgagttgcaaataggatcaaggatgggaagttt 365 ||||||||||||| ||||| ||||| ||||||||||||||||||||||||||||||||| Sbjct: 622 caccttattttggctgcattgttgggcgagttgcaaataggatcaaggatgggaagttt 680
>gb|BC102446.1| Bos taurus galactose mutarotase (aldose 1-epimerase), mRNA (cDNA clone MGC:127639 IMAGE:7947254), complete cds Length = 2247 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 399 aacaatgggccgaacagccttcatggtggattgaaggggtttgacaaggt 448 ||||| ||||| |||||||| ||||| ||| | || |||||||||||||| Sbjct: 340 aacaacgggcccaacagcctgcatggaggagtcaaagggtttgacaaggt 389
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 cgccaccatcacctccctcctc 230 |||||||||||||||||||||| Sbjct: 17812018 cgccaccatcacctccctcctc 17811997
>dbj|AP004348.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0683C09 Length = 185139 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 cgccaccatcacctccctcctc 230 |||||||||||||||||||||| Sbjct: 39010 cgccaccatcacctccctcctc 38989
>dbj|AP003849.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1753_E03 Length = 126734 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 209 cgccaccatcacctccctcctc 230 |||||||||||||||||||||| Sbjct: 116771 cgccaccatcacctccctcctc 116750
>gb|BT020690.1| Bos taurus galactose mutarotase (aldose 1-epimerase) (GALM), mRNA, complete cds Length = 2194 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 399 aacaatgggccgaacagccttcatggtggattgaaggggtttgacaaggt 448 ||||| ||||| |||||||| ||||| ||| | || |||||||||||||| Sbjct: 357 aacaacgggcccaacagcctgcatggaggagtcaaagggtttgacaaggt 406
>ref|NM_001034795.1| Bos taurus galactose mutarotase (aldose 1-epimerase) (GALM), mRNA Length = 2247 Score = 44.1 bits (22), Expect = 0.54 Identities = 43/50 (86%) Strand = Plus / Plus Query: 399 aacaatgggccgaacagccttcatggtggattgaaggggtttgacaaggt 448 ||||| ||||| |||||||| ||||| ||| | || |||||||||||||| Sbjct: 340 aacaacgggcccaacagcctgcatggaggagtcaaagggtttgacaaggt 389
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome Length = 2364842 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 236 cgacgcgcaaggggatctcgcggat 260 |||||||||||||| |||||||||| Sbjct: 2334127 cgacgcgcaaggggctctcgcggat 2334103
>ref|NM_214406.1| Sus scrofa galactose mutarotase (GALM), mRNA Length = 2219 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 atcaacaatgggccgaacagccttcatgg 424 |||||||| ||||| |||||||||||||| Sbjct: 352 atcaacaacgggcccaacagccttcatgg 380
>dbj|AB044390.1| Sus scrofa mut mRNA for aldose 1-epimerase, complete cds Length = 2219 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 396 atcaacaatgggccgaacagccttcatgg 424 |||||||| ||||| |||||||||||||| Sbjct: 352 atcaacaacgggcccaacagccttcatgg 380
>ref|XM_466284.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1691 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ggcagcagcaatggcggtgg 150 |||||||||||||||||||| Sbjct: 1107 ggcagcagcaatggcggtgg 1088
>ref|NM_190204.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1509 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggcagcagcaatggcggtg 149 |||||||||||||||||||| Sbjct: 1470 aggcagcagcaatggcggtg 1489
>gb|AC122457.4| Mus musculus BAC clone RP24-266P11 from chromosome 12, complete sequence Length = 159954 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 510 agcaaagatggcgaagaagg 529 |||||||||||||||||||| Sbjct: 133234 agcaaagatggcgaagaagg 133253
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 agcaagcaagcaggttcatc 127 |||||||||||||||||||| Sbjct: 13718407 agcaagcaagcaggttcatc 13718388
>gb|AC103576.8| Rattus norvegicus 12 BAC CH230-63N13 (Children's Hospital Oakland Research Institute) complete sequence Length = 219287 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 107 aagcaagcaagcaggttcat 126 |||||||||||||||||||| Sbjct: 144939 aagcaagcaagcaggttcat 144958
>emb|AL731561.12| Human DNA sequence from clone RP11-463P17 on chromosome 10 Contains a novel gene, gene FLJ32104, a novel gene, the RBP3 gene for retinol binding protein 3, the GDF2 gene for growth differentiation factor 2, the GDF10 gene for growth differentiation factor 10 and three CpG islands, complete sequence Length = 204512 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 gtttgacaaggttgtgtggg 456 |||||||||||||||||||| Sbjct: 18640 gtttgacaaggttgtgtggg 18659
>emb|AL603764.27| Human DNA sequence from clone RP11-481L19 on chromosome 10 Contains the 3' end of the PRSS11 gene for protease serine 11 (IGF binding) and the DMBT1 gene for deleted in malignant brain tumors 1, complete sequence Length = 191741 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 210 gccaccatcacctccctcct 229 |||||||||||||||||||| Sbjct: 21482 gccaccatcacctccctcct 21501
>emb|AL603965.10| Human DNA sequence from clone RP11-145E20 on chromosome 10 Contains a ARF GTPase-activating protein (MRIP2) pseudogene, the gene for a novel protein similar to annexin A8 (ANXA8) the 5' end of a novel gene similar to LOC195977 (FLJ32754), a novel pseudogene and a novel gene, complete sequence Length = 104811 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 437 gtttgacaaggttgtgtggg 456 |||||||||||||||||||| Sbjct: 100054 gtttgacaaggttgtgtggg 100073
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 gatggcgaagaaggttaccc 535 |||||||||||||||||||| Sbjct: 1320911 gatggcgaagaaggttaccc 1320930
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 agcaagcaagcaggttcatc 127 |||||||||||||||||||| Sbjct: 13713382 agcaagcaagcaggttcatc 13713363
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 ggcagcagcaatggcggtgg 150 |||||||||||||||||||| Sbjct: 21469628 ggcagcagcaatggcggtgg 21469647
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggcagcagcaatggcggtg 149 |||||||||||||||||||| Sbjct: 38624801 aggcagcagcaatggcggtg 38624820 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tctagcgaagcaagcaagca 119 |||||||||||||||||||| Sbjct: 3727557 tctagcgaagcaagcaagca 3727576
>gb|AC137076.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBb0033D20, from chromosome 3, complete sequence Length = 128707 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 108 agcaagcaagcaggttcatc 127 |||||||||||||||||||| Sbjct: 109079 agcaagcaagcaggttcatc 109060
>dbj|AP003346.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0434C04 Length = 150064 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggcagcagcaatggcggtg 149 |||||||||||||||||||| Sbjct: 145482 aggcagcagcaatggcggtg 145501
>dbj|AP003431.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:B1099D03 Length = 191022 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggcagcagcaatggcggtg 149 |||||||||||||||||||| Sbjct: 82774 aggcagcagcaatggcggtg 82793
>dbj|AP004865.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0020C11 Length = 163328 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 131 ggcagcagcaatggcggtgg 150 |||||||||||||||||||| Sbjct: 64555 ggcagcagcaatggcggtgg 64574
>dbj|AP003215.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC clone:OSJNBa0089K24 Length = 154137 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 100 tctagcgaagcaagcaagca 119 |||||||||||||||||||| Sbjct: 1099 tctagcgaagcaagcaagca 1118
>dbj|BS000111.1| Pan troglodytes chromosome 22 clone:PTB-093K04, map 22, complete sequences Length = 184428 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ccaccatcacctccctcctc 230 |||||||||||||||||||| Sbjct: 164006 ccaccatcacctccctcctc 164025
>dbj|AK121374.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023127C14, full insert sequence Length = 2115 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggcagcagcaatggcggtg 149 |||||||||||||||||||| Sbjct: 1730 aggcagcagcaatggcggtg 1749
>dbj|AK120665.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013159K02, full insert sequence Length = 1691 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 131 ggcagcagcaatggcggtgg 150 |||||||||||||||||||| Sbjct: 1107 ggcagcagcaatggcggtgg 1088
>ref|XM_565013.1| Anopheles gambiae str. PEST ENSANGP00000029239 (ENSANGG00000022823), partial mRNA Length = 2484 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 225 ctcctcgtccccgacgcgca 244 |||||||||||||||||||| Sbjct: 606 ctcctcgtccccgacgcgca 587
>dbj|AK072733.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023141N06, full insert sequence Length = 1089 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 130 aggcagcagcaatggcggtg 149 |||||||||||||||||||| Sbjct: 875 aggcagcagcaatggcggtg 894
>dbj|AP001710.1| Homo sapiens genomic DNA, chromosome 21q, section 54/105 Length = 340000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ccaccatcacctccctcctc 230 |||||||||||||||||||| Sbjct: 326357 ccaccatcacctccctcctc 326376
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 516 gatggcgaagaaggttaccc 535 |||||||||||||||||||| Sbjct: 1344502 gatggcgaagaaggttaccc 1344521
>dbj|AB001920.1| Oryza sativa (japonica cultivar-group) gene for phospholipase D, complete cds Length = 5871 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 100 tctagcgaagcaagcaagca 119 |||||||||||||||||||| Sbjct: 1758 tctagcgaagcaagcaagca 1739
>gb|AC131795.3| Mus musculus BAC clone RP24-490N11 from 10, complete sequence Length = 181961 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tcacctccctcctcgtcccc 236 |||||||||||||||||||| Sbjct: 22087 tcacctccctcctcgtcccc 22106
>gb|AC117209.3| Mus musculus BAC clone RP23-281E24 from 10, complete sequence Length = 195911 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 tcacctccctcctcgtcccc 236 |||||||||||||||||||| Sbjct: 186141 tcacctccctcctcgtcccc 186160
>dbj|AP000248.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone:P289H18, complete sequence Length = 146847 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ccaccatcacctccctcctc 230 |||||||||||||||||||| Sbjct: 69441 ccaccatcacctccctcctc 69460
>dbj|AP000210.1| Homo sapiens genomic DNA, chromosome 21q22.1, D21S226-AML region, clone f43D11-119B8, segment 8/12, complete sequence Length = 100000 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 211 ccaccatcacctccctcctc 230 |||||||||||||||||||| Sbjct: 345 ccaccatcacctccctcctc 364 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,705,159 Number of Sequences: 3902068 Number of extensions: 3705159 Number of successful extensions: 67593 Number of sequences better than 10.0: 50 Number of HSP's better than 10.0 without gapping: 51 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 67195 Number of HSP's gapped (non-prelim): 398 length of query: 617 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 594 effective length of database: 17,143,297,704 effective search space: 10183118836176 effective search space used: 10183118836176 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)