>VND_DROME (P22808) Homeobox protein vnd (Protein ventral nervous system|
           defective) (Homeobox protein NK-2)
          Length = 723

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
 Frame = -1

Query: 135 TQDPRDLQTTAEGLVEEHPSLELRHEREPRQER-DRGEEQQPH 10
           T  P    T    L    PSLE + ERE R++R DR E Q+ H
Sbjct: 41  TVSPSSPATPKRPLRTSTPSLERKREREDREDREDRKERQERH 83

>YDVG_SCHPO (O14232) Putative helicase C6F12.16c (EC 3.6.1.-)|
          Length = 1117

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 8/59 (13%)
 Frame = -1

Query: 378 KHTLLLLQTRPCIHMIILCTTTTLPMQFAAWNTYIH--------TTDKPQPLQPSSMPT 226
           + T++LL  +   H + L  T    MQFA W T IH        T  +P PLQ    P+
Sbjct: 326 EETIILLPDKS--HFVFLSATIPNAMQFAEWITKIHRQPCHVVYTDFRPTPLQHYLFPS 382

>TMBI1_MOUSE (Q8BJZ3) Transmembrane BAX inhibitor motif-containing protein 1|
           (RECS1 protein) (Responsive to centrifugal force and
           shear stress gene 1 protein)
          Length = 309

 Score = 30.4 bits (67), Expect = 2.4
 Identities = 13/52 (25%), Positives = 25/52 (48%)
 Frame = +2

Query: 236 LDGCSGCGLSVVCMYVFQAANCIGNVVVVHKIIIWMHGLVCSSSSVCLTYLI 391
           +D  S  GL  V   V      + ++V++ K I W+H +  +  ++C T  +
Sbjct: 212 VDFTSCTGLFCVLGIVLMVTGIVTSIVLIFKYIYWLHMVYAALGAICFTLFL 263

>LEGA_PEA (P02857) Legumin A precursor [Contains: Legumin A alpha chain|
           (Legumin A acidic chain); Legumin A beta chain (Legumin
           A basic chain)]
          Length = 517

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 12/23 (52%), Positives = 15/23 (65%)
 Frame = -1

Query: 81  PSLELRHEREPRQERDRGEEQQP 13
           P  + RH+R  RQE D  EE+QP
Sbjct: 259 PEKQARHQRGSRQEEDEDEEKQP 281

>APX1_CAEEL (P41990) Anterior pharynx in excess protein 1 precursor|
          Length = 515

 Score = 30.0 bits (66), Expect = 3.1
 Identities = 11/25 (44%), Positives = 13/25 (52%)
 Frame = +1

Query: 280 CIPGCKLHWQCSSSAQDNHMDAWSG 354
           CI   KLHW+CS+         WSG
Sbjct: 145 CIANAKLHWECSTHGVRRCSAGWSG 169

>HEPA_VZVD (P09300) DNA helicase/primase complex-associated protein|
          Length = 771

 Score = 29.3 bits (64), Expect = 5.3
 Identities = 15/39 (38%), Positives = 24/39 (61%), Gaps = 7/39 (17%)
 Frame = -2

Query: 329 SCALL--LHCQCNLQPGIHTYI-----LLTSHNRYSHPA 234
           SCA +  + C  +L+P IHT++     LL +HN +S P+
Sbjct: 717 SCACIPPIDCAAHLKPLIHTFVTIINHLLDAHNDFSSPS 755

>INVO_SAGOE (P24712) Involucrin|
          Length = 493

 Score = 28.5 bits (62), Expect = 9.1
 Identities = 26/97 (26%), Positives = 41/97 (42%), Gaps = 7/97 (7%)
 Frame = -1

Query: 285 NTYIHTTDKPQPLQPSSMPTIVYLPYY*L-RRQSIHLPIVLAPRRPVLLVPTQDPRDLQT 109
           NT      +P PL P      V LP   L + +  H+ IV         VP Q+    Q 
Sbjct: 28  NTQQEQRKQPAPLPPPCQKVPVELPVEVLSKHEEKHMTIVKG-------VPEQECEQQQP 80

Query: 108 TAEGLVEEHPSLELRH------EREPRQERDRGEEQQ 16
             + L ++H   +  H      E++ +QE+ + E+QQ
Sbjct: 81  QEQELQQQHWEQDKEHQKAENPEQQLKQEKVQREKQQ 117


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 60,445,579
Number of Sequences: 219361
Number of extensions: 1195301
Number of successful extensions: 3948
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 3706
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3932
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3072927439
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)