>YWZ5_CAEEL (Q11095) Hypothetical protein C02B8.5|
          Length = 453

 Score = 34.3 bits (77), Expect = 0.083
 Identities = 10/22 (45%), Positives = 14/22 (63%)
 Frame = -1

Query: 198 NTIWCSRCEIWWKWRDVPVDKY 133
           N+ WC  C + W+WR +P D Y
Sbjct: 412 NSEWCGLCNLCWQWRKLPADYY 433

>PFA5_YEAST (Q03289) Palmitoyltransferase PFA5 (EC 2.3.1.-) (Protein fatty|
           acyltransferase 5)
          Length = 374

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 12/27 (44%), Positives = 16/27 (59%)
 Frame = -1

Query: 252 YDKYRIDECIRADPIGHGNTIWCSRCE 172
           YD     +C ++DP  HG  IWCS C+
Sbjct: 111 YDAVVPPKCYQSDP--HGYPIWCSECQ 135

>MTCY_LEUME (P38577) Bacteriocin mesentericin Y105 precursor|
          Length = 61

 Score = 29.6 bits (65), Expect = 2.0
 Identities = 22/59 (37%), Positives = 30/59 (50%)
 Frame = -2

Query: 251 MINTESMSVYVRTQ*DMEIQYGVVGAKYGGNGETCRSTSTQKFIYYGSPSPAGHTRLAS 75
           M N +S+  Y   Q D +    VVG KY GNG  C  T +   + +G  + AG  RLA+
Sbjct: 1   MTNMKSVEAY--QQLDNQNLKKVVGGKYYGNGVHC--TKSGCSVNWGEAASAGIHRLAN 55

>FPG_BDEBA (Q6ML45) Formamidopyrimidine-DNA glycosylase (EC 3.2.2.23)|
           (Fapy-DNA glycosylase) (DNA-(apurinic or apyrimidinic
           site) lyase mutM) (EC 4.2.99.18) (AP lyase mutM)
          Length = 269

 Score = 28.5 bits (62), Expect = 4.5
 Identities = 11/40 (27%), Positives = 20/40 (50%)
 Frame = -1

Query: 291 FYQYPNRLYSMTMYDKYRIDECIRADPIGHGNTIWCSRCE 172
           ++Q   R+Y           + +++  +G  NT WCSRC+
Sbjct: 229 YFQTSFRVYGRDKEPCVTCGQQVKSKVLGGRNTFWCSRCQ 268

>FER_THEAC (P00218) Zinc-containing ferredoxin|
          Length = 142

 Score = 28.1 bits (61), Expect = 5.9
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = -1

Query: 252 YDKYRIDECIRADPIGHGNTIWCSRCE 172
           ++KYR D+C   DP+   + I+C  CE
Sbjct: 107 WNKYRTDKC---DPVRESDCIFCMACE 130

>SYT_MANSM (Q65TQ0) Threonyl-tRNA synthetase (EC 6.1.1.3) (Threonine--tRNA|
           ligase) (ThrRS)
          Length = 643

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 7/53 (13%)
 Frame = +3

Query: 120 DKFLRTCRPARLAI--STIFRTDYTILYFH-----VLLGPHVYTHRFCIYHTL 257
           D F +   P ++AI    I + D+  LY H     +  GPHV   RFC +  L
Sbjct: 146 DTFEKRGEPYKMAILDENIAKDDHPALYHHEEYIDMCRGPHVPNMRFCHHFKL 198

>RHOC_MOUSE (Q62159) Rho-related GTP-binding protein RhoC precursor|
           (Silica-induced gene 61 protein) (SIG-61)
          Length = 193

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -3

Query: 178 VRNMVEMARRAGRQVRKN 125
           VR + EMA RAG QVRKN
Sbjct: 167 VREVFEMATRAGLQVRKN 184

>RHOC_HUMAN (P08134) Rho-related GTP-binding protein RhoC precursor (H9)|
          Length = 193

 Score = 27.7 bits (60), Expect = 7.8
 Identities = 13/18 (72%), Positives = 14/18 (77%)
 Frame = -3

Query: 178 VRNMVEMARRAGRQVRKN 125
           VR + EMA RAG QVRKN
Sbjct: 167 VREVFEMATRAGLQVRKN 184


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 40,375,644
Number of Sequences: 219361
Number of extensions: 726315
Number of successful extensions: 1840
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 1824
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1840
length of database: 80,573,946
effective HSP length: 74
effective length of database: 64,341,232
effective search space used: 1544189568
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)