ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal32m24
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1ref|NM_191136.1| Oryza sativa (japonica cultivar-group), predic... 571 e-159
2dbj|AK073172.1| Oryza sativa (japonica cultivar-group) cDNA clon... 571 e-159
3dbj|AK071990.1| Oryza sativa (japonica cultivar-group) cDNA clon... 280 5e-72
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
5dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic D... 174 2e-40
6gb|DQ167208.1| Zea mays dual-specificity protein-like phosphatas... 172 9e-40
7gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome... 84 6e-13
8dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
9dbj|AK119495.1| Oryza sativa (japonica cultivar-group) cDNA clon... 84 6e-13
10ref|XM_550651.1| Oryza sativa (japonica cultivar-group), mRNA 46 0.13
11dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
12dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
13dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
14dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
15dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic D... 46 0.13
16emb|BX649406.10| Zebrafish DNA sequence from clone CH211-203N20 ... 42 2.1
17gb|AC123704.21| Mus musculus chromosome 15, clone RP23-351F24, c... 42 2.1
18gb|AC110195.14| Mus musculus chromosome 3, clone RP24-291L17, co... 40 8.3
19ref|XM_493799.1| Oryza sativa (japonica cultivar-group), mRNA 40 8.3
20gb|AC161210.5| Mus musculus chromosome 3, clone RP23-71N6, compl... 40 8.3
21gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosom... 40 8.3
22gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 40 8.3
23gb|AC164179.7| Mus musculus 10 BAC RP24-63J23 (Roswell Park Canc... 40 8.3
24ref|XM_786612.1| PREDICTED: Strongylocentrotus purpuratus hypoth... 40 8.3
25gb|AC069020.8| Homo sapiens chromosome 10 clone RP11-165K20, com... 40 8.3
26gb|AC024600.5| Homo sapiens chromosome 10 clone RP11-179K3, comp... 40 8.3
27gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genom... 40 8.3
28gb|AC157651.3| Mus musculus BAC clone RP24-363O21 from chromosom... 40 8.3
29dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
30dbj|AK070433.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.3
31gb|AC131325.8| Mus musculus chromosome 17, clone RP23-431O10, co... 40 8.3
32gb|AC154617.3| Mus musculus BAC clone RP23-319O17 from chromosom... 40 8.3

>ref|NM_191136.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1392

 Score =  571 bits (288), Expect = e-159
 Identities = 459/516 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   acccgacgctcctctacaacgtcctgcgcaaccaattcgaggccgagttccggtggtggg 61
           |||||||||| ||||||||||| ||||||||||  |||||||| ||||||||||||||||
Sbjct: 161 acccgacgctgctctacaacgtgctgcgcaaccggttcgaggcggagttccggtggtggg 220

                                                                       
Query: 62  accgcgtcgaccagtgtattttgctaggagccgttcctttcccaagtgatgttccacgtt 121
           |||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 221 accgagtcgaccagtatattttgctaggtgctgttcctttcccaagtgatgttccacgtt 280

                                                                       
Query: 122 tgaagcaacttggagttcagggagttgtaacattgaatgagccttatgagactctggtgc 181
           ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
Sbjct: 281 tgaagcaacttggagttcagggagttgtaacattgaatgaggcttatgagaccctggtcc 340

                                                                       
Query: 182 caatgtccttgtaccaggcccatgggattgatcaccttgtgattgccacaagagactacc 241
           |||  || || |||||||||||||||||||| |||||| | ||| |||||||||||||||
Sbjct: 341 caacatctttataccaggcccatgggattgaccaccttattattcccacaagagactacc 400

                                                                       
Query: 242 tcttcgcaccatccctcgaagatatttgtcaagccatcgattttatccaccgtaatgctt 301
           | || |||||| ||||| | ||||||||||||||||| |||||||||||||| ||||| |
Sbjct: 401 tgtttgcaccagccctccaggatatttgtcaagccatagattttatccaccggaatgcat 460

                                                                       
Query: 302 cacacggtggtactacttatgttcactgtaaagctggaagaggacgaagcaccactattg 361
           || | ||||| | |||||||||||||||||||||||||||||| || ||||| |||||||
Sbjct: 461 cagaaggtggcattacttatgttcactgtaaagctggaagagggcgtagcacgactattg 520

                                                                       
Query: 362 ttttgtgctatttgatcaaatataggaacatgactcctgaagcagctttggatcatgtac 421
           ||||||| ||| |||| |||||| ||| ||||| ||| |||||||| || |||||||| |
Sbjct: 521 ttttgtgttatctgattaaatatcggagcatgagtccagaagcagcattagatcatgtcc 580

                                                                       
Query: 422 gatccattaggccccgagtgcttttggcaccatcacagtggcaggctgttatcgtattta 481
           |||||||||||||  |||| |||||||||||||| |||||||||||||| | ||| ||||
Sbjct: 581 gatccattaggcctagagtacttttggcaccatcgcagtggcaggctgtcaacgttttta 640

                                               
Query: 482 gcactctcaccactggacgtcttccagtacagagta 517
           | || |||||||| || ||||||||| |||||||||
Sbjct: 641 gtaccctcaccaccgggcgtcttccaatacagagta 676



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>dbj|AK073172.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033022G13, full
           insert sequence
          Length = 1471

 Score =  571 bits (288), Expect = e-159
 Identities = 459/516 (88%)
 Strand = Plus / Plus

                                                                       
Query: 2   acccgacgctcctctacaacgtcctgcgcaaccaattcgaggccgagttccggtggtggg 61
           |||||||||| ||||||||||| ||||||||||  |||||||| ||||||||||||||||
Sbjct: 323 acccgacgctgctctacaacgtgctgcgcaaccggttcgaggcggagttccggtggtggg 382

                                                                       
Query: 62  accgcgtcgaccagtgtattttgctaggagccgttcctttcccaagtgatgttccacgtt 121
           |||| |||||||||| |||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 383 accgagtcgaccagtatattttgctaggtgctgttcctttcccaagtgatgttccacgtt 442

                                                                       
Query: 122 tgaagcaacttggagttcagggagttgtaacattgaatgagccttatgagactctggtgc 181
           ||||||||||||||||||||||||||||||||||||||||| |||||||||| ||||| |
Sbjct: 443 tgaagcaacttggagttcagggagttgtaacattgaatgaggcttatgagaccctggtcc 502

                                                                       
Query: 182 caatgtccttgtaccaggcccatgggattgatcaccttgtgattgccacaagagactacc 241
           |||  || || |||||||||||||||||||| |||||| | ||| |||||||||||||||
Sbjct: 503 caacatctttataccaggcccatgggattgaccaccttattattcccacaagagactacc 562

                                                                       
Query: 242 tcttcgcaccatccctcgaagatatttgtcaagccatcgattttatccaccgtaatgctt 301
           | || |||||| ||||| | ||||||||||||||||| |||||||||||||| ||||| |
Sbjct: 563 tgtttgcaccagccctccaggatatttgtcaagccatagattttatccaccggaatgcat 622

                                                                       
Query: 302 cacacggtggtactacttatgttcactgtaaagctggaagaggacgaagcaccactattg 361
           || | ||||| | |||||||||||||||||||||||||||||| || ||||| |||||||
Sbjct: 623 cagaaggtggcattacttatgttcactgtaaagctggaagagggcgtagcacgactattg 682

                                                                       
Query: 362 ttttgtgctatttgatcaaatataggaacatgactcctgaagcagctttggatcatgtac 421
           ||||||| ||| |||| |||||| ||| ||||| ||| |||||||| || |||||||| |
Sbjct: 683 ttttgtgttatctgattaaatatcggagcatgagtccagaagcagcattagatcatgtcc 742

                                                                       
Query: 422 gatccattaggccccgagtgcttttggcaccatcacagtggcaggctgttatcgtattta 481
           |||||||||||||  |||| |||||||||||||| |||||||||||||| | ||| ||||
Sbjct: 743 gatccattaggcctagagtacttttggcaccatcgcagtggcaggctgtcaacgttttta 802

                                               
Query: 482 gcactctcaccactggacgtcttccagtacagagta 517
           | || |||||||| || ||||||||| |||||||||
Sbjct: 803 gtaccctcaccaccgggcgtcttccaatacagagta 838



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>dbj|AK071990.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013090B20, full
           insert sequence
          Length = 1613

 Score =  280 bits (141), Expect = 5e-72
 Identities = 402/489 (82%)
 Strand = Plus / Plus

                                                                       
Query: 2   acccgacgctcctctacaacgtcctgcgcaaccaattcgaggccgagttccggtggtggg 61
           |||||||||| |||||||||||||| |||||||  |||||| | ||||||||||||||||
Sbjct: 320 acccgacgctgctctacaacgtcctccgcaaccggttcgagtctgagttccggtggtggg 379

                                                                       
Query: 62  accgcgtcgaccagtgtattttgctaggagccgttcctttcccaagtgatgttccacgtt 121
           | ||| ||||||||| | |||||||||| || || |||||| | |||||||| || | | 
Sbjct: 380 atcgcatcgaccagtatgttttgctaggtgctgtccctttctctagtgatgtaccgcatc 439

                                                                       
Query: 122 tgaagcaacttggagttcagggagttgtaacattgaatgagccttatgagactctggtgc 181
           | ||||||||||||||   ||| ||||| ||| |||||||  | ||||| |||||||| |
Sbjct: 440 tcaagcaacttggagtaaggggcgttgtcacactgaatgaatcgtatgaaactctggttc 499

                                                                       
Query: 182 caatgtccttgtaccaggcccatgggattgatcaccttgtgattgccacaagagactacc 241
           |||  ||||| |||||||| || |||||  |||| || | |||| |||| || ||||| |
Sbjct: 500 caacatccttataccaggctcacgggatcaatcatctcgagattcccacgagggactatc 559

                                                                       
Query: 242 tcttcgcaccatccctcgaagatatttgtcaagccatcgattttatccaccgtaatgctt 301
           | || || || || || || ||||| ||||||||  |||||||||| ||| | ||||| |
Sbjct: 560 tatttgccccttctctagaggatatctgtcaagctgtcgattttattcactgaaatgcat 619

                                                                       
Query: 302 cacacggtggtactacttatgttcactgtaaagctggaagaggacgaagcaccactattg 361
           |||| |||||||  |||||||| || ||||| |||||||| ||||||||||||||||| |
Sbjct: 620 cacaaggtggtagcacttatgtacattgtaaggctggaaggggacgaagcaccactatag 679

                                                                       
Query: 362 ttttgtgctatttgatcaaatataggaacatgactcctgaagcagctttggatcatgtac 421
           |||| ||||||||||| || || |||||||||||||||||||| ||||| ||||||| ||
Sbjct: 680 ttttatgctatttgattaagtacaggaacatgactcctgaagctgctttagatcatgcac 739

                                                                       
Query: 422 gatccattaggccccgagtgcttttggcaccatcacagtggcaggctgttatcgtattta 481
           | ||  | |||||| |||| ||||| |||||||| || |||||||||||||   ||||||
Sbjct: 740 ggtctgtaaggcccagagtacttttagcaccatctcaatggcaggctgttaaattattta 799

                    
Query: 482 gcactctca 490
           ||| |||||
Sbjct: 800 gcaatctca 808



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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score =  174 bits (88), Expect = 2e-40
 Identities = 106/112 (94%)
 Strand = Plus / Plus

                                                                            
Query: 73       cagtgtattttgctaggagccgttcctttcccaagtgatgttccacgtttgaagcaactt 132
                |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 30862699 cagtatattttgctaggtgctgttcctttcccaagtgatgttccacgtttgaagcaactt 30862758

                                                                    
Query: 133      ggagttcagggagttgtaacattgaatgagccttatgagactctggtgccaa 184
                |||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 30862759 ggagttcagggagttgtaacattgaatgaggcttatgagaccctggtcccaa 30862810



 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Plus

                                                                            
Query: 196      caggcccatgggattgatcaccttgtgattgccacaagagactacctcttcgcaccatcc 255
                ||||||||||||||||| |||||| | ||| |||||||||||||||| || |||||| ||
Sbjct: 30863101 caggcccatgggattgaccaccttattattcccacaagagactacctgtttgcaccagcc 30863160

                                                         
Query: 256      ctcgaagatatttgtcaagccatcgattttatccaccgtaa 296
                ||| | ||||||||||||||||| |||||||||||||||||
Sbjct: 30863161 ctccaggatatttgtcaagccatagattttatccaccgtaa 30863201



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                            
Query: 2        acccgacgctcctctacaacgtcctgcgcaaccaattcgaggccgagttccggtggtggg 61
                |||||||||| ||||||||||| ||||||||||  |||||||| ||||||||||||||||
Sbjct: 30862106 acccgacgctgctctacaacgtgctgcgcaaccggttcgaggcggagttccggtggtggg 30862165

                              
Query: 62       accgcgtcgaccag 75
                |||| |||||||||
Sbjct: 30862166 accgagtcgaccag 30862179



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                            
Query: 379      aaatataggaacatgactcctgaagcagctttggatcatgtacgatccattaggccccga 438
                |||||| ||| ||||| ||| |||||||| || |||||||| ||||||||||||||  ||
Sbjct: 30863987 aaatatcggagcatgagtccagaagcagcattagatcatgtccgatccattaggcctaga 30864046

                                            
Query: 439      gtgcttttggcaccatcacagtggcagg 466
                || |||||||||||||| ||||||||||
Sbjct: 30864047 gtacttttggcaccatcgcagtggcagg 30864074



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                      
Query: 315      tacttatgttcactgtaaagctggaagaggacgaagcaccactattgttttgtg 368
                |||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 30863841 tacttatgttcactgtaaagctggaagagggcgtagcacgactattgttttgtg 30863894



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                       
Query: 101      tcccaagtgatgttccacgtttg 123
                |||||||||||||||||||||||
Sbjct: 40916655 tcccaagtgatgttccacgtttg 40916633



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>dbj|AP002972.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0638D12
          Length = 161277

 Score =  174 bits (88), Expect = 2e-40
 Identities = 106/112 (94%)
 Strand = Plus / Plus

                                                                         
Query: 73    cagtgtattttgctaggagccgttcctttcccaagtgatgttccacgtttgaagcaactt 132
             |||| |||||||||||| || |||||||||||||||||||||||||||||||||||||||
Sbjct: 63066 cagtatattttgctaggtgctgttcctttcccaagtgatgttccacgtttgaagcaactt 63125

                                                                 
Query: 133   ggagttcagggagttgtaacattgaatgagccttatgagactctggtgccaa 184
             |||||||||||||||||||||||||||||| |||||||||| ||||| ||||
Sbjct: 63126 ggagttcagggagttgtaacattgaatgaggcttatgagaccctggtcccaa 63177



 Score =  121 bits (61), Expect = 3e-24
 Identities = 91/101 (90%)
 Strand = Plus / Plus

                                                                         
Query: 196   caggcccatgggattgatcaccttgtgattgccacaagagactacctcttcgcaccatcc 255
             ||||||||||||||||| |||||| | ||| |||||||||||||||| || |||||| ||
Sbjct: 63468 caggcccatgggattgaccaccttattattcccacaagagactacctgtttgcaccagcc 63527

                                                      
Query: 256   ctcgaagatatttgtcaagccatcgattttatccaccgtaa 296
             ||| | ||||||||||||||||| |||||||||||||||||
Sbjct: 63528 ctccaggatatttgtcaagccatagattttatccaccgtaa 63568



 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 68/74 (91%)
 Strand = Plus / Plus

                                                                         
Query: 2     acccgacgctcctctacaacgtcctgcgcaaccaattcgaggccgagttccggtggtggg 61
             |||||||||| ||||||||||| ||||||||||  |||||||| ||||||||||||||||
Sbjct: 62473 acccgacgctgctctacaacgtgctgcgcaaccggttcgaggcggagttccggtggtggg 62532

                           
Query: 62    accgcgtcgaccag 75
             |||| |||||||||
Sbjct: 62533 accgagtcgaccag 62546



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 77/88 (87%)
 Strand = Plus / Plus

                                                                         
Query: 379   aaatataggaacatgactcctgaagcagctttggatcatgtacgatccattaggccccga 438
             |||||| ||| ||||| ||| |||||||| || |||||||| ||||||||||||||  ||
Sbjct: 64354 aaatatcggagcatgagtccagaagcagcattagatcatgtccgatccattaggcctaga 64413

                                         
Query: 439   gtgcttttggcaccatcacagtggcagg 466
             || |||||||||||||| ||||||||||
Sbjct: 64414 gtacttttggcaccatcgcagtggcagg 64441



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 51/54 (94%)
 Strand = Plus / Plus

                                                                   
Query: 315   tacttatgttcactgtaaagctggaagaggacgaagcaccactattgttttgtg 368
             |||||||||||||||||||||||||||||| || ||||| ||||||||||||||
Sbjct: 64208 tacttatgttcactgtaaagctggaagagggcgtagcacgactattgttttgtg 64261



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>gb|DQ167208.1| Zea mays dual-specificity protein-like phosphatase 4 mRNA, complete
           cds
          Length = 1116

 Score =  172 bits (87), Expect = 9e-40
 Identities = 333/415 (80%)
 Strand = Plus / Plus

                                                                       
Query: 4   ccgacgctcctctacaacgtcctgcgcaaccaattcgaggccgagttccggtggtgggac 63
           |||||||| ||||||||||| || |||||||  ||||| | ||||||||| |||||||| 
Sbjct: 160 ccgacgcttctctacaacgtgctccgcaaccggttcgatggcgagttccgctggtgggat 219

                                                                       
Query: 64  cgcgtcgaccagtgtattttgctaggagccgttcctttcccaagtgatgttccacgtttg 123
           ||| ||||| ||| | |||||||||| || ||||| ||| | || |||||||  ||  ||
Sbjct: 220 cgcatcgacaagtatgttttgctaggtgctgttccgttctctagcgatgttctgcgcctg 279

                                                                       
Query: 124 aagcaacttggagttcagggagttgtaacattgaatgagccttatgagactctggtgcca 183
           ||||||||||| ||    |||||||| ||| | ||||| || ||||| |||||||| |||
Sbjct: 280 aagcaacttggtgtaagaggagttgttacactcaatgaaccctatgaaactctggttcca 339

                                                                       
Query: 184 atgtccttgtaccaggcccatgggattgatcaccttgtgattgccacaagagactacctc 243
           |  ||||| |||||||| ||||| ||  |||| ||    ||| | |||||||||||||| 
Sbjct: 340 acatccttataccaggctcatggaatcaatcatctcaaaattcctacaagagactacctg 399

                                                                       
Query: 244 ttcgcaccatccctcgaagatatttgtcaagccatcgattttatccaccgtaatgcttca 303
           || || |||||||| ||  |||||||||  ||  | |||||||||||  ||||||     
Sbjct: 400 tttgccccatccctggagcatatttgtcgtgcagtggattttatccattgtaatgaagtg 459

                                                                       
Query: 304 cacggtggtactacttatgttcactgtaaagctggaagaggacgaagcaccactattgtt 363
           || |||||||  || ||||| |||||||| |||||||| ||||||||||||||||| |||
Sbjct: 460 caaggtggtagcacctatgtccactgtaaggctggaaggggacgaagcaccactatagtt 519

                                                                  
Query: 364 ttgtgctatttgatcaaatataggaacatgactcctgaagcagctttggatcatg 418
           ||||| | ||||||||| || || || ||||||||||||| ||||||||||||||
Sbjct: 520 ttgtgttttttgatcaagtacagaaatatgactcctgaagtagctttggatcatg 574



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>gb|AC144740.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0075A10,
              complete sequence
          Length = 171101

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                          
Query: 2      acccgacgctcctctacaacgtcctgcgcaaccaattcgaggccgagttccggtggtggg 61
              |||||||||| |||||||||||||| |||||||  |||||| | ||||||||||||||||
Sbjct: 132514 acccgacgctgctctacaacgtcctccgcaaccggttcgagtctgagttccggtggtggg 132455

                            
Query: 62     accgcgtcgaccag 75
              | ||| ||||||||
Sbjct: 132454 atcgcatcgaccag 132441



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                          
Query: 295    aatgcttcacacggtggtactacttatgttcactgtaaagctggaagaggacgaagcacc 354
              ||||| ||||| |||||||  |||||||| || ||||| |||||||| ||||||||||||
Sbjct: 130861 aatgcatcacaaggtggtagcacttatgtacattgtaaggctggaaggggacgaagcacc 130802

                                   
Query: 355    actattgttttgtgctatttg 375
              ||||| ||||| |||||||||
Sbjct: 130801 actatagttttatgctatttg 130781



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                          
Query: 385    aggaacatgactcctgaagcagctttggatcatgtacgatccattaggccccgagtgctt 444
              |||||||||||||||||||| ||||| ||||||| ||| ||  | |||||| |||| |||
Sbjct: 130678 aggaacatgactcctgaagctgctttagatcatgcacggtctgtaaggcccagagtactt 130619

                                     
Query: 445    ttggcaccatcacagtggcaggc 467
              || |||||||| || ||||||||
Sbjct: 130618 ttagcaccatctcaatggcaggc 130596



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                          
Query: 80     ttttgctaggagccgttcctttcccaagtgatgttccacgtttgaagcaacttggagttc 139
              |||||||||| || || |||||| | |||||||| || | | | ||||||||||||||  
Sbjct: 131838 ttttgctaggtgctgtccctttctctagtgatgtaccgcatctcaagcaacttggagtaa 131779

                                                                          
Query: 140    agggagttgtaacattgaatgagccttatgagactctggtgccaatgtccttgtaccagg 199
               ||| ||||| ||| |||||||  | ||||| |||||||| ||||  ||||| |||||||
Sbjct: 131778 ggggcgttgtcacactgaatgaatcgtatgaaactctggttccaacatccttataccagg 131719



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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 66/74 (89%)
 Strand = Plus / Minus

                                                                            
Query: 2        acccgacgctcctctacaacgtcctgcgcaaccaattcgaggccgagttccggtggtggg 61
                |||||||||| |||||||||||||| |||||||  |||||| | ||||||||||||||||
Sbjct: 25890982 acccgacgctgctctacaacgtcctccgcaaccggttcgagtctgagttccggtggtggg 25890923

                              
Query: 62       accgcgtcgaccag 75
                | ||| ||||||||
Sbjct: 25890922 atcgcatcgaccag 25890909



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 71/81 (87%)
 Strand = Plus / Minus

                                                                            
Query: 295      aatgcttcacacggtggtactacttatgttcactgtaaagctggaagaggacgaagcacc 354
                ||||| ||||| |||||||  |||||||| || ||||| |||||||| ||||||||||||
Sbjct: 25889329 aatgcatcacaaggtggtagcacttatgtacattgtaaggctggaaggggacgaagcacc 25889270

                                     
Query: 355      actattgttttgtgctatttg 375
                ||||| ||||| |||||||||
Sbjct: 25889269 actatagttttatgctatttg 25889249



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 71/83 (85%)
 Strand = Plus / Minus

                                                                            
Query: 385      aggaacatgactcctgaagcagctttggatcatgtacgatccattaggccccgagtgctt 444
                |||||||||||||||||||| ||||| ||||||| ||| ||  | |||||| |||| |||
Sbjct: 25889146 aggaacatgactcctgaagctgctttagatcatgcacggtctgtaaggcccagagtactt 25889087

                                       
Query: 445      ttggcaccatcacagtggcaggc 467
                || |||||||| || ||||||||
Sbjct: 25889086 ttagcaccatctcaatggcaggc 25889064



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 96/120 (80%)
 Strand = Plus / Minus

                                                                            
Query: 80       ttttgctaggagccgttcctttcccaagtgatgttccacgtttgaagcaacttggagttc 139
                |||||||||| || || |||||| | |||||||| || | | | ||||||||||||||  
Sbjct: 25890306 ttttgctaggtgctgtccctttctctagtgatgtaccgcatctcaagcaacttggagtaa 25890247

                                                                            
Query: 140      agggagttgtaacattgaatgagccttatgagactctggtgccaatgtccttgtaccagg 199
                 ||| ||||| ||| |||||||  | ||||| |||||||| ||||  ||||| |||||||
Sbjct: 25890246 ggggcgttgtcacactgaatgaatcgtatgaaactctggttccaacatccttataccagg 25890187



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>dbj|AK119495.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-134-D11, full
           insert sequence
          Length = 1524

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 90/106 (84%)
 Strand = Plus / Plus

                                                                       
Query: 385 aggaacatgactcctgaagcagctttggatcatgtacgatccattaggccccgagtgctt 444
           |||||||||||||||||||| ||||| ||||||| ||| ||  | |||||| |||| |||
Sbjct: 696 aggaacatgactcctgaagctgctttagatcatgcacggtctgtaaggcccagagtactt 755

                                                         
Query: 445 ttggcaccatcacagtggcaggctgttatcgtatttagcactctca 490
           || |||||||| || |||||||||||||   ||||||||| |||||
Sbjct: 756 ttagcaccatctcaatggcaggctgttaaattatttagcaatctca 801



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>ref|XM_550651.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 375

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                  
Query: 41  aggccgagttccggtggtgggac 63
           |||||||||||||||||||||||
Sbjct: 269 aggccgagttccggtggtgggac 291



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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                      
Query: 41      aggccgagttccggtggtgggac 63
               |||||||||||||||||||||||
Sbjct: 2684356 aggccgagttccggtggtgggac 2684378



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                                
Query: 204     tgggattgatcaccttgtgattgccacaagaga 236
               |||||||||||||||||| ||| | ||||||||
Sbjct: 2685202 tgggattgatcaccttgttattcctacaagaga 2685234



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>dbj|AP003272.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0506E04
          Length = 139934

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                     
Query: 101    tcccaagtgatgttccacgtttg 123
              |||||||||||||||||||||||
Sbjct: 128761 tcccaagtgatgttccacgtttg 128739



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>dbj|AP003246.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0423A12
          Length = 178649

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                    
Query: 101   tcccaagtgatgttccacgtttg 123
             |||||||||||||||||||||||
Sbjct: 45080 tcccaagtgatgttccacgtttg 45058



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>dbj|AP004806.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0710H01
          Length = 187107

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                     
Query: 41     aggccgagttccggtggtgggac 63
              |||||||||||||||||||||||
Sbjct: 139697 aggccgagttccggtggtgggac 139719



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                               
Query: 204    tgggattgatcaccttgtgattgccacaagaga 236
              |||||||||||||||||| ||| | ||||||||
Sbjct: 140543 tgggattgatcaccttgttattcctacaagaga 140575



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>dbj|AP006554.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0529C07
          Length = 174011

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 41    aggccgagttccggtggtgggac 63
             |||||||||||||||||||||||
Sbjct: 96103 aggccgagttccggtggtgggac 96125



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 204   tgggattgatcaccttgtgattgccacaagaga 236
             |||||||||||||||||| ||| | ||||||||
Sbjct: 96949 tgggattgatcaccttgttattcctacaagaga 96981



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>emb|BX649406.10| Zebrafish DNA sequence from clone CH211-203N20 in linkage group 4
              Contains two CpG islands, complete sequence
          Length = 141237

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 453    atcacagtggcaggctgttat 473
              |||||||||||||||||||||
Sbjct: 114853 atcacagtggcaggctgttat 114833



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>gb|AC123704.21| Mus musculus chromosome 15, clone RP23-351F24, complete sequence
          Length = 202330

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 129    acttggagttcagggagttgtaaca 153
              |||||||||||| ||||||||||||
Sbjct: 157493 acttggagttcatggagttgtaaca 157517



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>gb|AC110195.14| Mus musculus chromosome 3, clone RP24-291L17, complete sequence
          Length = 171669

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 362    ttttgtgctatttgatcaaa 381
              ||||||||||||||||||||
Sbjct: 153400 ttttgtgctatttgatcaaa 153419



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>ref|XM_493799.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1671

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 425 ccattaggccccgagtgctt 444
           ||||||||||||||||||||
Sbjct: 419 ccattaggccccgagtgctt 400



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>gb|AC161210.5| Mus musculus chromosome 3, clone RP23-71N6, complete sequence
          Length = 158006

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 362   ttttgtgctatttgatcaaa 381
             ||||||||||||||||||||
Sbjct: 79448 ttttgtgctatttgatcaaa 79429



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>gb|AC116573.7| Mus musculus BAC clone RP23-114E15 from chromosome 6, complete sequence
          Length = 211910

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 541   ggcaccaaagcctccatccc 560
             ||||||||||||||||||||
Sbjct: 10556 ggcaccaaagcctccatccc 10537



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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 425      ccattaggccccgagtgctt 444
                ||||||||||||||||||||
Sbjct: 30511768 ccattaggccccgagtgctt 30511749



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>gb|AC164179.7| Mus musculus 10 BAC RP24-63J23 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 209011

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 475    gtatttagcactctcaccac 494
              ||||||||||||||||||||
Sbjct: 130516 gtatttagcactctcaccac 130497



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>ref|XM_786612.1| PREDICTED: Strongylocentrotus purpuratus hypothetical protein
           LOC586849 (LOC586849), partial mRNA
          Length = 741

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 228 cacaagagactacctcttcg 247
           ||||||||||||||||||||
Sbjct: 454 cacaagagactacctcttcg 435



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>gb|AC069020.8| Homo sapiens chromosome 10 clone RP11-165K20, complete sequence
          Length = 171413

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 370    tatttgatcaaatataggaacatg 393
              |||||||| |||||||||||||||
Sbjct: 156855 tatttgataaaatataggaacatg 156878



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>gb|AC024600.5| Homo sapiens chromosome 10 clone RP11-179K3, complete sequence
          Length = 147878

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 370   tatttgatcaaatataggaacatg 393
             |||||||| |||||||||||||||
Sbjct: 29622 tatttgataaaatataggaacatg 29645



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>gb|AC091811.7| Oryza sativa chromosome 3 BAC OSJNBa0069E14 genomic sequence, complete
             sequence
          Length = 139872

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 425   ccattaggccccgagtgctt 444
             ||||||||||||||||||||
Sbjct: 43341 ccattaggccccgagtgctt 43322



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>gb|AC157651.3| Mus musculus BAC clone RP24-363O21 from chromosome 6, complete sequence
          Length = 171141

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 541   ggcaccaaagcctccatccc 560
             ||||||||||||||||||||
Sbjct: 10300 ggcaccaaagcctccatccc 10319



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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 425      ccattaggccccgagtgctt 444
                ||||||||||||||||||||
Sbjct: 30603190 ccattaggccccgagtgctt 30603171



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>dbj|AK070433.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023054B12, full
           insert sequence
          Length = 3664

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 425 ccattaggccccgagtgctt 444
           ||||||||||||||||||||
Sbjct: 562 ccattaggccccgagtgctt 543



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>gb|AC131325.8| Mus musculus chromosome 17, clone RP23-431O10, complete sequence
          Length = 191331

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 376   atcaaatataggaacatgac 395
             ||||||||||||||||||||
Sbjct: 13603 atcaaatataggaacatgac 13584



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>gb|AC154617.3| Mus musculus BAC clone RP23-319O17 from chromosome 17, complete
             sequence
          Length = 197515

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 376   atcaaatataggaacatgac 395
             ||||||||||||||||||||
Sbjct: 24555 atcaaatataggaacatgac 24574


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,236,401
Number of Sequences: 3902068
Number of extensions: 4236401
Number of successful extensions: 71123
Number of sequences better than 10.0: 32
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 70924
Number of HSP's gapped (non-prelim): 198
length of query: 609
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 586
effective length of database: 17,143,297,704
effective search space: 10045972454544
effective search space used: 10045972454544
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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