ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal32m21 |
|---|---|
| Clone Library Name | barley_pub |
>PAP1_BRACM (Q94FZ9) Plastid lipid-associated protein 1, chloroplast precursor| Length = 327 Score = 48.9 bits (115), Expect = 1e-05 Identities = 51/203 (25%), Positives = 80/203 (39%), Gaps = 56/203 (27%) Frame = +1 Query: 10 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKSE-LLNGKWELLYTTSTSI--LQPQRPK 180 DRG A+ E + + ++ +LE +P P ++ LLNGKW L+YT+ + L +R Sbjct: 115 DRGLSASSETRAEISELITQLESKNPNPAPNEALFLLNGKWILVYTSFVGLFPLLSRRIS 174 Query: 181 FLRPYGTIYQAINTDTLRAQNME------------------------------------- 249 L I Q I++D+ N Sbjct: 175 PLVKVDEISQTIDSDSFTVHNSVRFASPLATTSLSTNAKFEVRSPKRVQVKFEQGVIGTP 234 Query: 250 ------TLPYFNQVTANLVPLNSRK---VAVRFDYFKIFSLIQIKAP-------GSGKGE 381 +P F +V + LN K +V+ + I + P S + Sbjct: 235 QLTDSIEIPEFVEVLGQKIDLNPIKGLLTSVQDTASSVARTISSQPPLKFSLPGDSAQSW 294 Query: 382 LEITYLDEELRVSRGDKGNLFVL 450 L TYLD++LR+SRGD G++FVL Sbjct: 295 LLTTYLDKDLRISRGDGGSVFVL 317
>PG1_PEA (Q9ZP40) Plastoglobulin 1, chloroplast precursor| Length = 358 Score = 48.5 bits (114), Expect = 1e-05 Identities = 58/201 (28%), Positives = 83/201 (41%), Gaps = 56/201 (27%) Frame = +1 Query: 16 GAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSILQ--PQRPKFL 186 G A E + V + +LE +PT P++ +LLNG W LLYT S+ +L L Sbjct: 149 GFRARSEVRAEVSEFVAQLEAANPTPAPVEEPDLLNGNWVLLYTASSELLPLLAAGSLPL 208 Query: 187 RPYGTIYQAINTDTLRAQNMETL--PYFN---QVTANLVPLNSRKVAVRF---------- 321 I Q I+TD+ N TL P+ + V+A+ + ++ V F Sbjct: 209 LKLDKISQTIDTDSFTVVNSTTLSSPFASFSFSVSASFEVRSPTRIQVTFKEGSLQPPEI 268 Query: 322 -------DYFKIFS-------LIQIKAP-----------GSGKGELEI------------ 390 + IF L+Q P SG+ L+I Sbjct: 269 KSKIDLPENINIFGQQLSLGPLLQSLGPLENVVANISRVISGQSPLKIPIPGERTSSWLI 328 Query: 391 -TYLDEELRVSRGDKGNLFVL 450 TYLD++LR+SRGD G LFVL Sbjct: 329 TTYLDKDLRISRGD-GGLFVL 348
>PAP2_ORYSA (Q6K439) Probable plastid-lipid-associated protein 2, chloroplast| precursor (Fibrillin-like protein 2) Length = 319 Score = 47.4 bits (111), Expect = 3e-05 Identities = 53/207 (25%), Positives = 86/207 (41%), Gaps = 60/207 (28%) Frame = +1 Query: 10 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSIL----QPQR 174 +RG A+ E + V ++ +LE +PT P ++ LLNGKW L YT+ + + Sbjct: 107 ERGLRASSETRAEVVELITQLEARNPTPAPTEALTLLNGKWILAYTSFSQLFPLLGSGSL 166 Query: 175 PKFLRPYGTIYQAINTDTLRAQNMETLPYFNQVTANLVPLNS-------RKVAVRFD--- 324 P+ ++ I Q I+++ QN + + + V N+ ++V ++FD Sbjct: 167 PQLVK-VEEISQTIDSENFTVQN--CIKFSGPLATTSVSTNAKFEVRSPKRVQIKFDEGI 223 Query: 325 ---------------------------YFKIFSLIQIKAPG-----SGKGELEI------ 390 IFS I+ A SG+ L+I Sbjct: 224 IGTPQLTDSIVLPEKFELFGQNIDLTPLKGIFSSIENAASSVARTISGQPPLKIPIRTDN 283 Query: 391 -------TYLDEELRVSRGDKGNLFVL 450 TYLD+ELR+SRGD ++FVL Sbjct: 284 AESWLLTTYLDDELRISRGDGSSIFVL 310
>CHRC_CUCSA (Q96398) Chromoplast-specific carotenoid-associated protein,| chloroplast precursor Length = 322 Score = 46.6 bits (109), Expect = 5e-05 Identities = 50/204 (24%), Positives = 81/204 (39%), Gaps = 57/204 (27%) Frame = +1 Query: 10 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSILQ-PQRPKF 183 DRG + + + + ++ +LE +PT P ++ LLNGKW L YTT + R Sbjct: 111 DRGLRVSRDTRAEIVELITQLESKNPTPAPTEALTLLNGKWILAYTTFAGLFPLLSRNLP 170 Query: 184 LRPYGTIYQAINTDTLRAQNMETLPYFNQVTANLVPLNSR-------KVAVRFD------ 324 L I Q I+++ L QN ++ + + + N++ +V ++F+ Sbjct: 171 LVKVEEISQTIDSENLTVQN--SVQFSGPLATTSITTNAKFEVRSPLRVHIKFEEGVIGT 228 Query: 325 ------------------------YFKIFSLIQIKAPGSGK------------------G 378 + I S +Q A K Sbjct: 229 PQLTDSIVIPDNVDFLGQKIDFTPFNGIISSLQDTASNVAKTISSQPPIKFSISNTRVES 288 Query: 379 ELEITYLDEELRVSRGDKGNLFVL 450 L TYLDE+LR+SRGD G++FVL Sbjct: 289 WLLTTYLDEDLRISRGDGGSVFVL 312
>PAP_CITUN (Q9ZWQ8) Plastid-lipid associated protein, chloroplast precursor| (CitPAP) Length = 323 Score = 46.6 bits (109), Expect = 5e-05 Identities = 63/211 (29%), Positives = 86/211 (40%), Gaps = 58/211 (27%) Frame = +1 Query: 10 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSILQPQRPKFL 186 DRG AT E + + ++ +LE +PT P ++ LLN KW L+Y TS S L P + Sbjct: 111 DRGLNATSETRAEIVELITQLEAKNPTPAPTEALTLLNAKWILVY-TSFSGLFPLLSRGT 169 Query: 187 RPYG---TIYQAINTDTLRAQN------------METLPYFN------------------ 267 P I Q I+++ QN + T F Sbjct: 170 LPLARVEEISQTIDSENFTVQNSIQFAGPLATTSISTNAKFEVRSPKRVQIKFEEGVIGT 229 Query: 268 -QVTANLV-PLNSRKVAVRFDY--FK-IFSLIQIKAPGSGK------------------G 378 QVT +LV P N + + D FK I S +Q A K Sbjct: 230 PQVTDSLVLPENVEFLGQKIDLSPFKGILSSVQDTASSVAKTISSQPPLKFSISNSNAQS 289 Query: 379 ELEITYLDEELRVSRGDKGNLFV-LKMVDPL 468 L TYLDE+LR+SR D G++FV +K PL Sbjct: 290 WLLTTYLDEDLRISRADAGSVFVFIKEGSPL 320
>PAP3_ARATH (O82291) Probable plastid-lipid associated protein 3, chloroplast| precursor (AtPap3) (Fibrillin 3) Length = 376 Score = 45.1 bits (105), Expect = 1e-04 Identities = 56/201 (27%), Positives = 85/201 (42%), Gaps = 56/201 (27%) Frame = +1 Query: 16 GAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSI--LQPQRPKFL 186 G +A E + V ++ +LE ++PT PL++ ELL+G W LLYT + + L L Sbjct: 167 GFKAGSEVRAEVLELVNQLEALNPTPAPLENPELLDGNWVLLYTAFSELIPLLAAGSTPL 226 Query: 187 RPYGTIYQAINTDTLRAQNMETL--PYFN---QVTANLVPLNSRKVAVRFD--------- 324 +I Q+I+T+ L N TL P+ + TA+ + ++ V F Sbjct: 227 LKVKSISQSIDTNNLIIDNSTTLSSPFADFSFSATASFEVRSPSRIEVSFKEGTLKPPVI 286 Query: 325 ------------YFKIFSLIQIKA--------------------------PGS-GKGELE 387 + + SL +K PG+ G L Sbjct: 287 KSSVDLPESVGVFGQQISLSLLKQSLNPLQDVAANISRALSGQPPLKLPFPGNRGSSWLL 346 Query: 388 ITYLDEELRVSRGDKGNLFVL 450 TYLD++LR+SRGD G LFVL Sbjct: 347 TTYLDKDLRISRGD-GGLFVL 366
>PAP3_ORYSA (Q7XBW5) Probable plastid-lipid associated protein 3, chloroplast| precursor Length = 374 Score = 44.3 bits (103), Expect = 2e-04 Identities = 53/212 (25%), Positives = 86/212 (40%), Gaps = 59/212 (27%) Frame = +1 Query: 10 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLK-SELLNGKWELLYTTSTSILQ----PQR 174 D G A+ E + V ++ +LE +PT EP++ + LL G W L+YT + +L Sbjct: 161 DLGFRASSEVRGEVLELVTQLEATNPTPEPVQATHLLAGNWILIYTAYSELLPILAVGAA 220 Query: 175 PKFLRPYGTIYQAINTDTLRAQNMETL--PYFN---QVTANLVPLNSRKVAVRFDYF--- 330 P F I Q I+T+++ N T+ P+ + TA+ + ++ V+F Sbjct: 221 PLF--KVDEISQEIDTNSMTIVNASTISSPFASFSFSATASFDVQSPSRIEVQFKEGSFQ 278 Query: 331 --KIFSLIQIKA------------------------------------------PGSGKG 378 KI S + + A PG+ + Sbjct: 279 PPKISSSVDLPAEVDIFGQKISLGPVQQVLNPLQQAFASIAGSISGQPPLKLPIPGNNRA 338 Query: 379 E--LEITYLDEELRVSRGDKGNLFVLKMVDPL 468 L TYLD++LR+SRGD G ++K PL Sbjct: 339 RSWLLTTYLDKDLRISRGDGGLFILVKEGSPL 370
>LIPC_SOLTU (P80471) Light-induced protein, chloroplast precursor| (Chloroplastic drought-induced stress protein CDSP-34) Length = 326 Score = 43.9 bits (102), Expect = 3e-04 Identities = 53/203 (26%), Positives = 83/203 (40%), Gaps = 56/203 (27%) Frame = +1 Query: 10 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSI--LQPQRPK 180 +RG A+ E + + ++ +LE +P P ++ LLNGKW L YT+ + + L + Sbjct: 114 NRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNL 173 Query: 181 FLRPYGTIYQAINTDTLRAQN------------METLPYFN------------------- 267 L I Q I++++ QN + T F Sbjct: 174 PLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP 233 Query: 268 QVTANLV-PLNSRKVAVRFDYFKIFSLIQ------------------IKAP---GSGKGE 381 Q+T ++V P N + + D LI IK P + + Sbjct: 234 QLTDSIVLPENVEFLGQKIDLSPFKGLITSVQDTASSVAKSISSQPPIKFPITNNNAQSW 293 Query: 382 LEITYLDEELRVSRGDKGNLFVL 450 L TYLD+ELR+SRGD G++FVL Sbjct: 294 LLTTYLDDELRISRGDAGSVFVL 316
>PAP2_ARATH (O49629) Probable plastid-lipid associated protein 2, chloroplast| precursor (AtPap2) (Fibrillin 2) Length = 310 Score = 43.5 bits (101), Expect = 4e-04 Identities = 47/203 (23%), Positives = 78/203 (38%), Gaps = 56/203 (27%) Frame = +1 Query: 10 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKSE-LLNGKWELLYTT------------- 147 DRG A+ E + + + +LE +PT P ++ LLNGKW L YT+ Sbjct: 98 DRGLSASSETRAEIGDLITQLESKNPTPAPTEALFLLNGKWILAYTSFVNLFPLLSRGIV 157 Query: 148 -------------STSILQPQRPKFLRPYGTIYQAINTD-------------------TL 231 S + +F P GT + N T Sbjct: 158 PLIKVDEISQTIDSDNFTVQNSVRFAGPLGTNSISTNAKFEIRSPKRVQIKFEQGVIGTP 217 Query: 232 RAQNMETLPYFNQVTANLVPLNSRK---VAVRFDYFKIFSLIQIKAP-------GSGKGE 381 + + +P + +V + LN + +V+ + I + P + + Sbjct: 218 QLTDSIEIPEYVEVLGQKIDLNPIRGLLTSVQDTASSVARTISSQPPLKFSLPADNAQSW 277 Query: 382 LEITYLDEELRVSRGDKGNLFVL 450 L TYLD+++R+SRGD G++FVL Sbjct: 278 LLTTYLDKDIRISRGDGGSVFVL 300
>PAP2_BRACM (Q94KU6) Plastid lipid-associated protein 2, chloroplast precursor| Length = 319 Score = 42.7 bits (99), Expect = 7e-04 Identities = 51/206 (24%), Positives = 77/206 (37%), Gaps = 59/206 (28%) Frame = +1 Query: 10 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKSE-LLNGKWELLY--------------- 141 DRG A+ E + + + +LE +PT P + LLNGKW L Y Sbjct: 107 DRGLSASSETRAEIGDLITQLESKNPTPAPTDALFLLNGKWILAYTSFVGLFPLLSRGIV 166 Query: 142 ------------------------------TTSTS------ILQPQRPKFLRPYGTIYQA 213 TTS S I P+R + G I Sbjct: 167 PLVKVDEISQTIDSDNFTVENSVLFAGPLATTSISTNAKFEIRSPKRVQIKFEEGVIGTP 226 Query: 214 INTDTLRAQNMETLPYFNQVTANLVPLNSRKVAVRFDYFKIFSLIQIKAP-------GSG 372 TD++ E + + Q +L P+ +V+ + I + P S Sbjct: 227 QLTDSIEIP--EYVEFLGQ-KIDLTPIRGLLTSVQDTATSVARTISSQPPLKFSLPGDSA 283 Query: 373 KGELEITYLDEELRVSRGDKGNLFVL 450 + L TYLD+++R+SRGD G++FVL Sbjct: 284 QSWLLTTYLDKDIRISRGDGGSVFVL 309
>LIPC_SOLDE (O99019) Light-induced protein, chloroplast precursor (C40.4)| Length = 326 Score = 42.0 bits (97), Expect = 0.001 Identities = 52/203 (25%), Positives = 82/203 (40%), Gaps = 56/203 (27%) Frame = +1 Query: 10 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSI--LQPQRPK 180 +RG A+ E + + ++ +LE +P P ++ LLNGKW L YT+ + + L + Sbjct: 114 NRGLSASSETRAEIVELITQLESKNPNPAPTEALTLLNGKWILAYTSFSGLFPLLSRGNL 173 Query: 181 FLRPYGTIYQAINTDTLRAQN------------METLPYFN------------------- 267 L I Q I++++ QN + T F Sbjct: 174 PLVRVEEISQTIDSESFTVQNSVVFAGPLATTSISTNAKFEVRSPKRVQIKFEEGIIGTP 233 Query: 268 QVTANLV-PLNSRKVAVRFDYFKIFSLIQ------------------IKAP---GSGKGE 381 Q+T ++V P N + + D LI IK P + + Sbjct: 234 QLTDSIVLPENVEFLGQKIDVSPFKGLITSVQDTASSVVKSISSQPPIKFPITNNNAQSW 293 Query: 382 LEITYLDEELRVSRGDKGNLFVL 450 L TYLD+ELR+ RGD G++FVL Sbjct: 294 LLTTYLDDELRIPRGDAGSVFVL 316
>PAP1_ARATH (O81439) Probable plastid-lipid associated protein 1, chloroplast| precursor (AtPap1) (Fibrillin 1) Length = 318 Score = 41.6 bits (96), Expect = 0.002 Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 3/81 (3%) Frame = +1 Query: 10 DRGAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSI--LQPQRPK 180 DRG + + + + ++ +LE +PT P ++ LLNGKW L YT+ + L +R + Sbjct: 106 DRGLSVSSDTRAEISELITQLESKNPTPAPNEALFLLNGKWILAYTSFVGLFPLLSRRIE 165 Query: 181 FLRPYGTIYQAINTDTLRAQN 243 L I Q I++D+ QN Sbjct: 166 PLVKVDEISQTIDSDSFTVQN 186
>PAP3_BRACM (Q94KU5) Plastid lipid-associated protein 3, chloroplast precursor| Length = 360 Score = 41.6 bits (96), Expect = 0.002 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 3/83 (3%) Frame = +1 Query: 16 GAEATPEDKDRVDQIAQRLEEVSPTKEPLKS-ELLNGKWELLYTTSTSILQ--PQRPKFL 186 G A E + V +I +LE ++PT+ P+++ ELL+G W LLYT + +L L Sbjct: 151 GFRAGSEVRAEVLEIVNQLEALNPTQAPVENPELLDGNWVLLYTAFSELLPLLAAGSTPL 210 Query: 187 RPYGTIYQAINTDTLRAQNMETL 255 +I Q+I+T +L N TL Sbjct: 211 LKVKSISQSIDTKSLSIDNSTTL 233 Score = 34.3 bits (77), Expect = 0.26 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 1/36 (2%) Frame = +1 Query: 346 IQIKAPGS-GKGELEITYLDEELRVSRGDKGNLFVL 450 +++ PG+ G L TYLD++LR+SRGD G LFVL Sbjct: 316 LKLPFPGNRGSSWLLTTYLDKDLRISRGD-GGLFVL 350
>P32_MYCGE (Q49417) P32 adhesin (Cytadhesin P32)| Length = 280 Score = 35.8 bits (81), Expect = 0.089 Identities = 24/89 (26%), Positives = 43/89 (48%) Frame = +1 Query: 34 EDKDRVDQIAQRLEEVSPTKEPLKSELLNGKWELLYTTSTSILQPQRPKFLRPYGTIYQA 213 E+K+R +QIA++L+ +S +E E ++ + + + QP +P+F + + A Sbjct: 104 EEKERQEQIAEQLQRISDQQEQQTVE-IDPQQSQAQPSQPQVQQPLQPQFQQRVPLLRPA 162 Query: 214 INTDTLRAQNMETLPYFNQVTANLVPLNS 300 N NM+ P FNQ P N+ Sbjct: 163 FN------PNMQQRPGFNQPNQQFQPHNN 185
>MOAA_CLOAB (Q97HL8) Molybdenum cofactor biosynthesis protein A| Length = 318 Score = 30.4 bits (67), Expect = 3.7 Identities = 16/44 (36%), Positives = 23/44 (52%) Frame = +1 Query: 145 TSTSILQPQRPKFLRPYGTIYQAINTDTLRAQNMETLPYFNQVT 276 T+ IL PQ K L+ G I+ DTL++ + FNQ+T Sbjct: 93 TTNGILLPQMAKDLKKAGLKRVNISLDTLKSDTFTKITNFNQIT 136
>TRMB_SCHPO (Q96WV1) Probable tRNA (guanine-N(7)-)-methyltransferase (EC| 2.1.1.33) (tRNA(m7G46)-methyltransferase) Length = 273 Score = 30.0 bits (66), Expect = 4.9 Identities = 15/45 (33%), Positives = 25/45 (55%), Gaps = 3/45 (6%) Frame = +1 Query: 151 TSILQPQRPKFLRPYGTIYQAINTDTLR---AQNMETLPYFNQVT 276 TS L + F+RP+GT+Y + + L AQ+++ P F + T Sbjct: 187 TSTLASEYAYFIRPHGTLYTITDVEELHVWMAQHLDAHPLFRRFT 231
>PROA_LEPIN (P94872) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 30.0 bits (66), Expect = 4.9 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +1 Query: 325 YFKIFSLIQIKAPGSGKGELEITYLDEELRVSRGDKG--NLFVLKMVDPLYRVPL 483 +F+ SLI I P G+G + + ++ V + DKG NL++ + DP +P+ Sbjct: 192 FFQQTSLIDIVVPRGGEGLIRFVSENSKIPVVKHDKGVCNLYIDQDADPEKVIPI 246
>PROA_LEPIC (Q72NQ9) Gamma-glutamyl phosphate reductase (GPR) (EC 1.2.1.41)| (Glutamate-5-semialdehyde dehydrogenase) (Glutamyl-gamma-semialdehyde dehydrogenase) (GSA dehydrogenase) Length = 416 Score = 30.0 bits (66), Expect = 4.9 Identities = 17/55 (30%), Positives = 30/55 (54%), Gaps = 2/55 (3%) Frame = +1 Query: 325 YFKIFSLIQIKAPGSGKGELEITYLDEELRVSRGDKG--NLFVLKMVDPLYRVPL 483 +F+ SLI I P G+G + + ++ V + DKG NL++ + DP +P+ Sbjct: 192 FFQQTSLIDIVVPRGGEGLIRFVSENSKIPVVKHDKGVCNLYIDQDADPEKVIPI 246
>CUL1_SCHPO (O13790) Cullin-1 (Cul-1) (Cell division control 53 homolog)| Length = 767 Score = 29.6 bits (65), Expect = 6.4 Identities = 19/63 (30%), Positives = 29/63 (46%), Gaps = 1/63 (1%) Frame = +1 Query: 103 KSELLNGKWELLYTTSTSILQP-QRPKFLRPYGTIYQAINTDTLRAQNMETLPYFNQVTA 279 K + LNG W+ L T + I + + Y +Y AI+ A T+ FN TA Sbjct: 16 KYDSLNGTWDFLKTGVSQIFERLDEGMTITKYMELYTAIHNYCADASKTITVDNFNDQTA 75 Query: 280 NLV 288 N++ Sbjct: 76 NVL 78
>JUN_PIG (P56432) Transcription factor AP-1 (Activator protein 1) (AP1)| (Proto-oncogene c-jun) (V-jun avian sarcoma virus 17 oncogene homolog) Length = 331 Score = 29.6 bits (65), Expect = 6.4 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 7/57 (12%) Frame = +3 Query: 66 AAGGGEPDQGAAQVRAP------QRQVGAPLHHLHFHSPATEA-KVSEAIRDDLPGD 215 ++GGG P GAA + P Q+Q P HHL P +A K ++PG+ Sbjct: 182 SSGGGAPSYGAAGLAFPAQPQQQQQQPPQPPHHLPVQHPRLQALKEEPQTVPEMPGE 238
>SYA_DESPS (Q6AQ16) Alanyl-tRNA synthetase (EC 6.1.1.7) (Alanine--tRNA ligase)| (AlaRS) Length = 882 Score = 29.3 bits (64), Expect = 8.3 Identities = 26/92 (28%), Positives = 39/92 (42%), Gaps = 8/92 (8%) Frame = +3 Query: 63 AAAGGGEPDQGAAQVRAPQRQV--------GAPLHHLHFHSPATEAKVSEAIRDDLPGDQ 218 A AGG D+G+ + + Q V G LH L + ++ D D+ Sbjct: 506 AEAGGQMGDRGSVRWQGGQASVYATQAEGTGLILHDLLVEEGELSLGLEVTLQVD---DE 562 Query: 219 HRHATSSKHGDTALLQSGHCQLGASQL*KSGS 314 R AT+S H T LLQ+ + + +SGS Sbjct: 563 ERKATASNHSATHLLQAALISVLGDHVKQSGS 594 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 77,262,681 Number of Sequences: 219361 Number of extensions: 1580698 Number of successful extensions: 4607 Number of sequences better than 10.0: 21 Number of HSP's better than 10.0 without gapping: 4460 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4598 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4815021120 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
