ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal33b08 |
|---|---|
| Clone Library Name | barley_pub |
>PP11_HUMAN (P21128) Placental protein 11 precursor (EC 3.4.21.-) (PP11)| Length = 369 Score = 151 bits (382), Expect = 1e-36 Identities = 87/214 (40%), Positives = 126/214 (58%), Gaps = 2/214 (0%) Frame = +3 Query: 18 LVRWLGEDVLTKPTYSRFCALLDNYNPHQGYKEVVTQQDKHEEAAFIEEIARTAPIKYLH 197 L ++ E + +KPTY+ F LL+NY G+ E + Q+ E+ AF+ EI +TA +K L+ Sbjct: 144 LFTYVNEKLFSKPTYAAFINLLNNYQRATGHGEHFSAQELAEQDAFLREIMKTAVMKELY 203 Query: 198 RYLVLKGVASQDYDDFKAMLTSLWFTLYGRCGNSSCSSAFEHVFVGEIKEQRQGETEVSG 377 +L + + +F L ++WF LY R SS FEHVF GE+K+ + V+G Sbjct: 204 SFLHHQNRYGSE-QEFVDDLKNMWFGLYSRGNEEGDSSGFEHVFSGEVKKGK-----VTG 257 Query: 378 FHNWIQFYLEEAKGNVDYQGYIFPRRRGESP-DSETQLLTVQFEWHGVLKSVSSSLIGVS 554 FHNWI+FYLEE +G VDY +I+ + P DS +L +QF W G K V S+ IG S Sbjct: 258 FHNWIRFYLEEKEGLVDYYSHIY-----DGPWDSYPDVLAMQFNWDGYYKEVGSAFIGSS 312 Query: 555 PEFELALYTLCFF-MGGEDNRVDIGPYTVNVKCY 653 PEFE ALY+LCF G+ ++ +G Y + V+ Y Sbjct: 313 PEFEFALYSLCFIARPGKVCQLSLGGYPLAVRTY 346
>RPC_BPPHC (P08979) Repressor protein C| Length = 683 Score = 33.1 bits (74), Expect = 0.75 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 5/50 (10%) Frame = -2 Query: 397 N*IQLWNPETSVSPCL-----CSFISPTNTCSNAEEQLELPHLPYKVNQR 263 N IQ W P P L CS + PT S +EE +E+P L V+Q+ Sbjct: 237 NPIQYWGPAAEQKPELELCAGCSKVVPTGEVSVSEESVEVPGLSMTVSQK 286
>PCDAA_PANTR (Q5DRF4) Protocadherin alpha 10 precursor (PCDH-alpha10)| Length = 948 Score = 30.0 bits (66), Expect = 6.3 Identities = 37/160 (23%), Positives = 59/160 (36%), Gaps = 9/160 (5%) Frame = +3 Query: 102 QGYKEVVTQQDKHEEAAFIE--EIARTAPIKYLHRYLVLKGVASQDYDDFKAMLTSLWFT 275 Q K Q HEE ++ AR + L L L+ + D+ A+L S Sbjct: 512 QSGKVYALQPLDHEELELLQFQVSARDGGVPPLGSNLTLQVFVLDENDNAPALLASP--- 568 Query: 276 LYGRCGNSSCSSAFEHVFVGEIKEQRQGETEVSGFHNWIQFYLEEAKGNVD-------YQ 434 G G + V G + + + SG++ W+ + L+ A Y Sbjct: 569 -AGSAGGAVSELVLRSVGAGHVVAKVRAVDADSGYNAWLSYELQSAAVGARIPFRVGLYT 627 Query: 435 GYIFPRRRGESPDSETQLLTVQFEWHGVLKSVSSSLIGVS 554 G I R + DS Q L V + HG +++ + VS Sbjct: 628 GEISTTRALDEADSPRQRLLVLVKDHGEPSLTATATVLVS 667
>PCDAA_HUMAN (Q9Y5I2) Protocadherin alpha 10 precursor (PCDH-alpha10)| Length = 948 Score = 30.0 bits (66), Expect = 6.3 Identities = 34/148 (22%), Positives = 56/148 (37%), Gaps = 9/148 (6%) Frame = +3 Query: 138 HEEAAFIE--EIARTAPIKYLHRYLVLKGVASQDYDDFKAMLTSLWFTLYGRCGNSSCSS 311 HEE ++ AR + L L L+ + D+ A+L S G G + Sbjct: 524 HEELELLQFQVSARDGGVPPLGSNLTLQVFVLDENDNAPALLASP----AGSAGGAVSEL 579 Query: 312 AFEHVFVGEIKEQRQGETEVSGFHNWIQFYLEEAKGNVD-------YQGYIFPRRRGESP 470 V G + + + SG++ W+ + L+ A Y G I R + Sbjct: 580 VLRSVVAGHVVAKVRAVDADSGYNAWLSYELQSAAVGARIPFRVGLYTGEISTTRALDET 639 Query: 471 DSETQLLTVQFEWHGVLKSVSSSLIGVS 554 DS Q L V + HG +++ + VS Sbjct: 640 DSPRQRLLVLVKDHGEPSLTATATVLVS 667
>PANC_XYLFT (Q87EV9) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 281 Score = 30.0 bits (66), Expect = 6.3 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = -3 Query: 537 SLILISAHHATQIARSVIVSPNQVIPH 457 SL++++ H+A ++ SV V+P Q PH Sbjct: 40 SLVMLARHYADRVVSSVFVNPTQFGPH 66
>PANC_XYLFA (Q9PGR8) Pantoate--beta-alanine ligase (EC 6.3.2.1) (Pantothenate| synthetase) (Pantoate-activating enzyme) Length = 281 Score = 30.0 bits (66), Expect = 6.3 Identities = 11/27 (40%), Positives = 19/27 (70%) Frame = -3 Query: 537 SLILISAHHATQIARSVIVSPNQVIPH 457 SL++++ H+A ++ SV V+P Q PH Sbjct: 40 SLVMLARHYADRVVSSVFVNPTQFGPH 66
>PER3_HUMAN (P56645) Period circadian protein 3 (hPER3)| Length = 1201 Score = 29.6 bits (65), Expect = 8.3 Identities = 24/64 (37%), Positives = 33/64 (51%), Gaps = 3/64 (4%) Frame = -2 Query: 625 PISTRLS--SPPIKKHSV*SASSNS-GLTPIKELDTDFSTPCHSNCTVSNCVSESGDSPR 455 P ++ LS SPP+K S +AS+ S GL P + TP H TV + S +SP Sbjct: 1003 PTASALSTGSPPMKNPSHPTASTLSMGLPPSR-------TPSHPTATVLSTGSPPSESPS 1055 Query: 454 RLGN 443 R G+ Sbjct: 1056 RTGS 1059
>PCDAB_HUMAN (Q9Y5I1) Protocadherin alpha 11 precursor (PCDH-alpha11)| Length = 949 Score = 29.6 bits (65), Expect = 8.3 Identities = 42/185 (22%), Positives = 67/185 (36%), Gaps = 14/185 (7%) Frame = +3 Query: 138 HEEAAFIE--EIARTAPIKYLHRYLVLKGVASQDYDDFKAMLTSLWFTLYGRCGNSSCSS 311 HEE ++ AR A + L + L+ + D+ A+L T G G + Sbjct: 524 HEELELLQFQVSARDAGVPPLSSNVTLQVFVLDENDNAPALLA----TQAGSAGGAVNKL 579 Query: 312 AFEHVFVGEIKEQRQGETEVSGFHNWIQFYLEEAKGNVD-------YQGYIFPRRRGESP 470 V G + + + SG++ W+ + L+ A G Y G I R + Sbjct: 580 VPRSVGAGHVVAKVRAVDADSGYNAWLSYELQPAAGGSRIPFRVGLYTGEISTTRALDEA 639 Query: 471 DSETQLLTVQFEWHG-----VLKSVSSSLIGVSPEFELALYTLCFFMGGEDNRVDIGPYT 635 DS L V + HG +V SL+ + + TL E VD+ Y Sbjct: 640 DSPRHRLLVLVKDHGEPALTATATVLVSLVESGQAPKASSRTLAGAASPEAALVDVNVYL 699 Query: 636 VNVKC 650 + C Sbjct: 700 IIAIC 704 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 94,403,148 Number of Sequences: 219361 Number of extensions: 1900185 Number of successful extensions: 4854 Number of sequences better than 10.0: 8 Number of HSP's better than 10.0 without gapping: 4709 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4849 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6257125380 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
