>CY561_PIG (Q95245) Cytochrome b561 (Cytochrome b-561)|
          Length = 252

 Score = 56.6 bits (135), Expect = 3e-08
 Identities = 27/63 (42%), Positives = 41/63 (65%)
 Frame = +1

Query: 250 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLIL 429
           W   +RGG+A+E+A   L FNVHP+ M+IG + L  +A++VY+VF      T K+ H +L
Sbjct: 35  WLGAYRGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKILHGLL 91

Query: 430 HAI 438
           H +
Sbjct: 92  HVL 94

>CY561_BOVIN (P10897) Cytochrome b561 (Cytochrome b-561)|
          Length = 252

 Score = 55.8 bits (133), Expect = 4e-08
 Identities = 28/65 (43%), Positives = 41/65 (63%)
 Frame = +1

Query: 238 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 417
           M   W   +RGG+A+E+A   L FNVHP+ M+IG + L  +A++VY+VF      T K+ 
Sbjct: 31  MTGAWLGMYRGGIAWESA---LQFNVHPLCMIIGLVFLQGDALLVYRVFRNEAKRTTKVL 87

Query: 418 HLILH 432
           H +LH
Sbjct: 88  HGLLH 92

>CY561_SHEEP (Q95204) Cytochrome b561 (Cytochrome b-561)|
          Length = 252

 Score = 55.5 bits (132), Expect = 6e-08
 Identities = 28/65 (43%), Positives = 41/65 (63%)
 Frame = +1

Query: 238 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 417
           M   W   +RGG+A+E+A   L FNVHP+ M+IG + L  +A++VY+VF      T K+ 
Sbjct: 31  MTGAWLGMYRGGIAWESA---LQFNVHPLCMVIGLVFLQGDALLVYRVFRNEAKRTTKVL 87

Query: 418 HLILH 432
           H +LH
Sbjct: 88  HGLLH 92

>CY561_MOUSE (Q60720) Cytochrome b561 (Cytochrome b-561)|
          Length = 250

 Score = 53.5 bits (127), Expect = 2e-07
 Identities = 27/61 (44%), Positives = 40/61 (65%)
 Frame = +1

Query: 250 WCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLIL 429
           W   +RGG+A+E++   L FNVHP+ M+IG I L  +A++VY+VF      T K+ H +L
Sbjct: 33  WLGLYRGGIAWESS---LQFNVHPLCMVIGMIFLQGDALLVYRVFRREAKRTTKILHGLL 89

Query: 430 H 432
           H
Sbjct: 90  H 90

>CY561_PONPY (Q5RCZ2) Cytochrome b561 (Cytochrome b-561)|
          Length = 251

 Score = 52.8 bits (125), Expect = 4e-07
 Identities = 27/65 (41%), Positives = 40/65 (61%)
 Frame = +1

Query: 238 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 417
           M   W   +RGG+A+E+   +L FN HP+ M+IG I L  +A++VY+VF      T K+ 
Sbjct: 30  MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFLQGDALLVYRVFRNEAKRTTKVL 86

Query: 418 HLILH 432
           H +LH
Sbjct: 87  HGLLH 91

>CY561_HUMAN (P49447) Cytochrome b561 (Cytochrome b-561)|
          Length = 251

 Score = 52.0 bits (123), Expect = 6e-07
 Identities = 27/65 (41%), Positives = 39/65 (60%)
 Frame = +1

Query: 238 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 417
           M   W   +RGG+A+E+   +L FN HP+ M+IG I L   A++VY+VF      T K+ 
Sbjct: 30  MTGAWLGLYRGGIAWES---DLQFNAHPLCMVIGLIFLQGNALLVYRVFRNEAKRTTKVL 86

Query: 418 HLILH 432
           H +LH
Sbjct: 87  HGLLH 91

>CY561_CAEEL (P34465) Putative cytochrome b561 (Cytochrome b-561)|
          Length = 266

 Score = 49.3 bits (116), Expect = 4e-06
 Identities = 23/66 (34%), Positives = 37/66 (56%)
 Frame = +1

Query: 238 MVLVWCIHFRGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLT 417
           +V +W   F  G A+   + +  FN HP  M++G + L  EA++VY+VF       +K  
Sbjct: 38  LVTIWMSKFESGFAWNE-DPDKEFNYHPTFMIMGMVFLFGEALLVYRVFRNERKKFSKTL 96

Query: 418 HLILHA 435
           H+ILH+
Sbjct: 97  HVILHS 102

>CY561_XENLA (Q91577) Cytochrome b561 (Cytochrome b-561)|
          Length = 247

 Score = 43.9 bits (102), Expect = 2e-04
 Identities = 19/44 (43%), Positives = 29/44 (65%)
 Frame = +1

Query: 301 LIFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAKLTHLILH 432
           L FNVHP+ M++G + L  EA++VY+VF      + K+ H +LH
Sbjct: 48  LQFNVHPLCMVLGMVFLCGEALLVYRVFRHETKRSTKILHGVLH 91

>5HT2C_RAT (P08909) 5-hydroxytryptamine 2C receptor (5-HT-2C) (Serotonin|
           receptor 2C) (5-HT2C) (5-HTR2C) (5HT-1C)
          Length = 460

 Score = 30.8 bits (68), Expect = 1.5
 Identities = 26/105 (24%), Positives = 44/105 (41%), Gaps = 4/105 (3%)
 Frame = +1

Query: 82  GRECAAPAPTGDQRKKKKEEDAGVRGEMAIALGVKATPFTYXXXXXXXXXXXMVLVWCIH 261
           G E  AP P  DQ+ ++K+++   RG M      K                  +++WC  
Sbjct: 275 GEEENAPNPNPDQKPRRKKKEKRPRGTMQAINNEKK-----ASKVLGIVFFVFLIMWCPF 329

Query: 262 F----RGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVF 384
           F       L  +A N+ L+  +  V + IG++  G    +VY +F
Sbjct: 330 FITNILSVLCGKACNQKLMEKLLNVFVWIGYVCSGINP-LVYTLF 373

>RPOP_MAIZE (P10581) Probable DNA-directed RNA polymerase (EC 2.7.7.6) (S-2 DNA|
            ORF1)
          Length = 1098

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 14/48 (29%), Positives = 26/48 (54%)
 Frame = -2

Query: 426  DQVGQLGSIVVQSRKYLVDHYGFTAEDNETDQHKNRVDVEDEVLVGRL 283
            D + ++G  ++   K+L DH    A  NE  Q+K+   VE+  ++ R+
Sbjct: 933  DSIFRMGHPLIIINKFLFDHILIPAIQNEHPQNKHLFSVEERSMLDRM 980

>C56D2_HUMAN (O14569) Cytochrome b561 domain-containing protein 2 (Putative|
           tumor suppressor protein 101F6)
          Length = 222

 Score = 29.6 bits (65), Expect = 3.4
 Identities = 13/36 (36%), Positives = 22/36 (61%)
 Frame = +1

Query: 304 IFNVHPVLMLIGFIILGSEAIMVYKVFPGLNHDTAK 411
           +F+ HPVLM + F  L +EA++V+     L H  ++
Sbjct: 44  LFSWHPVLMSLAFSFLMTEALLVFSPESSLLHSLSR 79

>APOB_HUMAN (P04114) Apolipoprotein B-100 precursor (Apo B-100) [Contains:|
           Apolipoprotein B-48 (Apo B-48)]
          Length = 4563

 Score = 29.3 bits (64), Expect = 4.4
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = -2

Query: 384 KYLVDHYGFTAEDNETDQHKNRVDVEDEVLVGRLEGEAAAEVDA 253
           K LVDH+G+T +D       N + +  E L+  L+ +   E  A
Sbjct: 732 KVLVDHFGYTKDDKHEQDMVNGIMLSVEKLIKDLKSKEVPEARA 775

>5HT2C_MOUSE (P34968) 5-hydroxytryptamine 2C receptor (5-HT-2C) (Serotonin|
           receptor 2C) (5-HT2C) (5-HTR2C) (5HT-1C)
          Length = 459

 Score = 28.9 bits (63), Expect = 5.8
 Identities = 24/100 (24%), Positives = 42/100 (42%), Gaps = 4/100 (4%)
 Frame = +1

Query: 97  APAPTGDQRKKKKEEDAGVRGEMAIALGVKATPFTYXXXXXXXXXXXMVLVWCIHF---- 264
           AP P  DQ+ ++K+++   RG M      K                  +++WC  F    
Sbjct: 279 APNPNPDQKPRRKKKEKRPRGTMQAINNEKK-----ASKVLGIVFFVFLIMWCPFFITNI 333

Query: 265 RGGLAFEAANKNLIFNVHPVLMLIGFIILGSEAIMVYKVF 384
              L  +A N+ L+  +  V + IG++  G    +VY +F
Sbjct: 334 LSVLCGKACNQKLMEKLLNVFVWIGYVCSGINP-LVYTLF 372

>LONH2_METTH (O26978) Putative protease La homolog type 2 (EC 3.4.21.-)|
          Length = 501

 Score = 28.1 bits (61), Expect = 9.9
 Identities = 14/28 (50%), Positives = 18/28 (64%), Gaps = 1/28 (3%)
 Frame = -2

Query: 327 KNRVDVEDEVL-VGRLEGEAAAEVDAPD 247
           KNR ++EDE+L + R EGE      APD
Sbjct: 94  KNRKEIEDEILEIERAEGELIDPQSAPD 121


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 48,102,257
Number of Sequences: 219361
Number of extensions: 776902
Number of successful extensions: 2599
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2594
length of database: 80,573,946
effective HSP length: 101
effective length of database: 58,418,485
effective search space used: 2570413340
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)