ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal32l15
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK064925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 180 3e-42
2ref|XM_472625.1| Oryza sativa (japonica cultivar-group), predic... 151 3e-33
3gb|BT017140.1| Zea mays clone EL01N0366C05.c mRNA sequence 121 3e-24
4emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4,... 117 4e-23
5dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 117 4e-23
6emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4,... 117 4e-23
7gb|AY107195.1| Zea mays PCO096052 mRNA sequence 113 7e-22
8ref|XM_466220.1| Oryza sativa (japonica cultivar-group), mRNA 94 6e-16
9dbj|AK070026.1| Oryza sativa (japonica cultivar-group) cDNA clon... 94 6e-16
10dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
11dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic D... 86 2e-13
12gb|BT023965.1| Zea mays clone EL01N0409H12 mRNA sequence 68 4e-08
13gb|AY103841.1| Zea mays PCO136641 mRNA sequence 60 9e-06
14ref|XM_630812.1| Dictyostelium discoideum hypothetical protein (... 42 2.0
15gb|AY392428.1| Dictyostelium discoideum DNA repair protein RAD50... 42 2.0
16emb|AL669834.10| Mouse DNA sequence from clone RP23-114O4 on chr... 42 2.0
17ref|NM_128916.1| Arabidopsis thaliana unknown protein AT2G33560 ... 40 8.0
18gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, c... 40 8.0
19gb|AY376158.1| Naegleria fowleri isolate 7852 small subunit ribo... 40 8.0
20gb|AY376157.1| Naegleria fowleri isolate 7853 small subunit ribo... 40 8.0
21gb|AY376156.1| Naegleria fowleri isolate 7845 small subunit ribo... 40 8.0
22gb|AY376155.1| Naegleria lovaniensis isolate 7372 small subunit ... 40 8.0
23gb|AY376154.1| Naegleria jadini isolate 7858 small subunit ribos... 40 8.0
24gb|AY376153.1| Naegleria gruberi isolate 7860 small subunit ribo... 40 8.0
25gb|AY376152.1| Naegleria australiensis isolate 7857 small subuni... 40 8.0
26gb|AC132344.3| Mus musculus BAC clone RP24-177A17 from chromosom... 40 8.0
27gb|AC124687.4| Mus musculus BAC clone RP24-447D15 from chromosom... 40 8.0
28emb|AL663066.12| Mouse DNA sequence from clone RP23-416K12 on ch... 40 8.0
29emb|BX957344.6| Zebrafish DNA sequence from clone CH211-129N15 i... 40 8.0
30gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, co... 40 8.0
31gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ... 40 8.0
32dbj|AK134152.1| Mus musculus adult male thymus cDNA, RIKEN full-... 40 8.0
33gb|AC155289.11| Mus musculus 6 BAC RP24-137B5 (Roswell Park Canc... 40 8.0
34emb|BX855596.4| Mouse DNA sequence from clone RP23-89N14 on chro... 40 8.0
35gb|AC160406.6| Mus musculus 10 BAC RP24-406K6 (Roswell Park Canc... 40 8.0
36gb|AC159620.2| Mus musculus BAC clone RP24-354K18 from chromosom... 40 8.0
37gb|AC097467.1| Homo sapiens BAC clone RP11-27G13 from 4, complet... 40 8.0
38gb|AF288092.1| Naegleria gruberi mitochondrial DNA, complete genome 40 8.0
39gb|AY088206.1| Arabidopsis thaliana clone 42992 mRNA, complete s... 40 8.0
40gb|AC153513.6| Mus musculus 10 BAC RP23-322K8 (Roswell Park Canc... 40 8.0
41gb|AF008938.1| Vibrio cholerae V86 phage putative replication pr... 40 8.0
42gb|AF125163.2| Bacteriophage K139, complete genome 40 8.0
43emb|AL669898.17| Mouse DNA sequence from clone RP23-6C3 on chrom... 40 8.0 
>dbj|AK064925.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000N16, full
            insert sequence
          Length = 2973

 Score =  180 bits (91), Expect = 3e-42
 Identities = 268/327 (81%)
 Strand = Plus / Plus

                                                                        
Query: 263  ggttgcagattatttggaattgagataagatctgctgtggaagaaacacaacctgtggta 322
            ||||||||||||||||||||||| ||||| || ||||| |||||| | |  ||||  |  
Sbjct: 1827 ggttgcagattatttggaattgaaataagctcagctgtagaagaagccctgcctgcagct 1886

                                                                        
Query: 323  actgtttcaggtgatggttatgaccaaacagctgcatctgtagacgtggactctggcgag 382
            |||||||||||||  |||||||| ||||| | |   |||||||| ||||||||||   ||
Sbjct: 1887 actgtttcaggtgtcggttatgatcaaactgttctctctgtagatgtggactctgatcag 1946

                                                                        
Query: 383  ctctcgcagccatccaatatcaacaactctggtgcccaagcagcaagcagtgagcgtgct 442
             |||| |||||||| |||  ||| || || | |||||  | | |||||||||| ||| ||
Sbjct: 1947 atctcacagccatctaatggcaataaatccgatgcccctggaacaagcagtgaacgttct 2006

                                                                        
Query: 443  cttcttgacacccaaacccgccaagttagaagctgcacaaaggtaattatgacaggaatg 502
            | ||||||  ||||||  || ||||| || |||||||||||||||||||||  ||| |||
Sbjct: 2007 cctcttgagtcccaaagtcgtcaagtgaggagctgcacaaaggtaattatgcaaggtatg 2066

                                                                        
Query: 503  gcagttggaagagcagtggacttgacaaagctatatgggtatgttgatcttcaccgcaag 562
            |||||||| || || |||||||||||||| ||| |||| |||| |||||||| | |||||
Sbjct: 2067 gcagttgggagggctgtggacttgacaaaactaaatggttatggtgatcttcgcagcaag 2126

                                       
Query: 563  ttggaggagatgtttgatatacagggg 589
            |||||||||||||||||||||||||||
Sbjct: 2127 ttggaggagatgtttgatatacagggg 2153



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 88/106 (83%)
 Strand = Plus / Plus

                                                                        
Query: 11   gcttcaccttctgtggttccagaacttgctcccaaatttggactatggaagtccccagct 70
            |||||||||||||||||| | |||||| |||| |  || |||||||||||  ||||| ||
Sbjct: 1536 gcttcaccttctgtggttgcggaacttcctccaagtttcggactatggaaacccccatct 1595

                                                          
Query: 71   gaaccaagccaaaccctatcattttcagagccacaacaggctcgag 116
            ||| ||  |||||| || |||||||| || ||||||| ||||||||
Sbjct: 1596 gaagcagcccaaactctctcattttcggaaccacaacgggctcgag 1641
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>ref|XM_472625.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 5022

 Score =  151 bits (76), Expect = 3e-33
 Identities = 142/164 (86%)
 Strand = Plus / Plus

                                                                        
Query: 426  caagcagtgagcgtgctcttcttgacacccaaacccgccaagttagaagctgcacaaagg 485
            |||||||||| ||| ||| ||||||  ||||||  || ||||| || |||||||||||||
Sbjct: 1229 caagcagtgaacgttctcctcttgagtcccaaagtcgtcaagtgaggagctgcacaaagg 1288

                                                                        
Query: 486  taattatgacaggaatggcagttggaagagcagtggacttgacaaagctatatgggtatg 545
            ||||||||  ||| ||||||||||| || || |||||||||||||| ||| |||| ||||
Sbjct: 1289 taattatgcaaggtatggcagttgggagggctgtggacttgacaaaactaaatggttatg 1348

                                                        
Query: 546  ttgatcttcaccgcaagttggaggagatgtttgatatacagggg 589
             |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 1349 gtgatcttcgcagcaagttggaggagatgtttgatatacagggg 1392



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                            
Query: 11   gcttcaccttctgtggttccagaacttgctcc 42
            |||||||||||||||||| | |||||| ||||
Sbjct: 1129 gcttcaccttctgtggttgcggaacttcctcc 1160
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>gb|BT017140.1| Zea mays clone EL01N0366C05.c mRNA sequence
          Length = 1239

 Score =  121 bits (61), Expect = 3e-24
 Identities = 109/125 (87%)
 Strand = Plus / Minus

                                                                       
Query: 464 caagttagaagctgcacaaaggtaattatgacaggaatggcagttggaagagcagtggac 523
           ||||| || |||||||| |||||||| |||  ||||||||| ||||| || |||||||||
Sbjct: 902 caagtcaggagctgcaccaaggtaatcatgcaaggaatggcggttggcagggcagtggac 843

                                                                       
Query: 524 ttgacaaagctatatgggtatgttgatcttcaccgcaagttggaggagatgtttgatata 583
            |||||| | || ||||||||| |||||| ||||||||||||||||||||||||||||| 
Sbjct: 842 ctgacaaggttagatgggtatgctgatctccaccgcaagttggaggagatgtttgatatc 783

                
Query: 584 caggg 588
           |||||
Sbjct: 782 caggg 778
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>emb|BX548156.1|OSJN00292 Oryza sativa genomic DNA, chromosome 4, BAC clone: P0076O17, complete
             sequence
          Length = 121130

 Score =  117 bits (59), Expect = 4e-23
 Identities = 95/107 (88%)
 Strand = Plus / Plus

                                                                         
Query: 483   aggtaattatgacaggaatggcagttggaagagcagtggacttgacaaagctatatgggt 542
             |||||||||||  ||| ||||||||||| || || |||||||||||||| ||| |||| |
Sbjct: 85170 aggtaattatgcaaggtatggcagttgggagggctgtggacttgacaaaactaaatggtt 85229

                                                            
Query: 543   atgttgatcttcaccgcaagttggaggagatgtttgatatacagggg 589
             ||| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 85230 atggtgatcttcgcagcaagttggaggagatgtttgatatacagggg 85276



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 177/224 (79%)
 Strand = Plus / Plus

                                                                         
Query: 263   ggttgcagattatttggaattgagataagatctgctgtggaagaaacacaacctgtggta 322
             ||||||||||||||||||||||| ||||| || ||||| |||||| | |  ||||  |  
Sbjct: 84874 ggttgcagattatttggaattgaaataagctcagctgtagaagaagccctgcctgcagct 84933

                                                                         
Query: 323   actgtttcaggtgatggttatgaccaaacagctgcatctgtagacgtggactctggcgag 382
             |||||||||||||  |||||||| ||||| | |   |||||||| ||||||||||   ||
Sbjct: 84934 actgtttcaggtgtcggttatgatcaaactgttctctctgtagatgtggactctgatcag 84993

                                                                         
Query: 383   ctctcgcagccatccaatatcaacaactctggtgcccaagcagcaagcagtgagcgtgct 442
              |||| |||||||| |||  ||| || || | |||||  | | |||||||||| ||| ||
Sbjct: 84994 atctcacagccatctaatggcaataaatccgatgcccctggaacaagcagtgaacgttct 85053

                                                         
Query: 443   cttcttgacacccaaacccgccaagttagaagctgcacaaaggt 486
             | ||||||  ||||||  || ||||| || ||||||||||||||
Sbjct: 85054 cctcttgagtcccaaagtcgtcaagtgaggagctgcacaaaggt 85097



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 50    ggactatggaagtccccagctgaaccaagccaaaccctatcattttcagagccacaacag 109
             |||||||||||  ||||| ||||| ||  |||||| || |||||||| || ||||||| |
Sbjct: 84622 ggactatggaaacccccatctgaagcagcccaaactctctcattttcggaaccacaacgg 84681

                    
Query: 110   gctcgag 116
             |||||||
Sbjct: 84682 gctcgag 84688



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 11    gcttcaccttctgtggttccagaacttgctcc 42
             |||||||||||||||||| | |||||| ||||
Sbjct: 84285 gcttcaccttctgtggttgcggaacttcctcc 84316
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  117 bits (59), Expect = 4e-23
 Identities = 95/107 (88%)
 Strand = Plus / Plus

                                                                            
Query: 483      aggtaattatgacaggaatggcagttggaagagcagtggacttgacaaagctatatgggt 542
                |||||||||||  ||| ||||||||||| || || |||||||||||||| ||| |||| |
Sbjct: 22019248 aggtaattatgcaaggtatggcagttgggagggctgtggacttgacaaaactaaatggtt 22019307

                                                               
Query: 543      atgttgatcttcaccgcaagttggaggagatgtttgatatacagggg 589
                ||| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 22019308 atggtgatcttcgcagcaagttggaggagatgtttgatatacagggg 22019354



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 177/224 (79%)
 Strand = Plus / Plus

                                                                            
Query: 263      ggttgcagattatttggaattgagataagatctgctgtggaagaaacacaacctgtggta 322
                ||||||||||||||||||||||| ||||| || ||||| |||||| | |  ||||  |  
Sbjct: 22018952 ggttgcagattatttggaattgaaataagctcagctgtagaagaagccctgcctgcagct 22019011

                                                                            
Query: 323      actgtttcaggtgatggttatgaccaaacagctgcatctgtagacgtggactctggcgag 382
                |||||||||||||  |||||||| ||||| | |   |||||||| ||||||||||   ||
Sbjct: 22019012 actgtttcaggtgtcggttatgatcaaactgttctctctgtagatgtggactctgatcag 22019071

                                                                            
Query: 383      ctctcgcagccatccaatatcaacaactctggtgcccaagcagcaagcagtgagcgtgct 442
                 |||| |||||||| |||  ||| || || | |||||  | | |||||||||| ||| ||
Sbjct: 22019072 atctcacagccatctaatggcaataaatccgatgcccctggaacaagcagtgaacgttct 22019131

                                                            
Query: 443      cttcttgacacccaaacccgccaagttagaagctgcacaaaggt 486
                | ||||||  ||||||  || ||||| || ||||||||||||||
Sbjct: 22019132 cctcttgagtcccaaagtcgtcaagtgaggagctgcacaaaggt 22019175



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                            
Query: 50       ggactatggaagtccccagctgaaccaagccaaaccctatcattttcagagccacaacag 109
                |||||||||||  ||||| ||||| ||  |||||| || |||||||| || ||||||| |
Sbjct: 22018700 ggactatggaaacccccatctgaagcagcccaaactctctcattttcggaaccacaacgg 22018759

                       
Query: 110      gctcgag 116
                |||||||
Sbjct: 22018760 gctcgag 22018766



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                                
Query: 11       gcttcaccttctgtggttccagaacttgctcc 42
                |||||||||||||||||| | |||||| ||||
Sbjct: 22018363 gcttcaccttctgtggttgcggaacttcctcc 22018394
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>emb|AL662973.3|OSJN00175 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064D20,
             complete sequence
          Length = 99855

 Score =  117 bits (59), Expect = 4e-23
 Identities = 95/107 (88%)
 Strand = Plus / Plus

                                                                         
Query: 483   aggtaattatgacaggaatggcagttggaagagcagtggacttgacaaagctatatgggt 542
             |||||||||||  ||| ||||||||||| || || |||||||||||||| ||| |||| |
Sbjct: 91819 aggtaattatgcaaggtatggcagttgggagggctgtggacttgacaaaactaaatggtt 91878

                                                            
Query: 543   atgttgatcttcaccgcaagttggaggagatgtttgatatacagggg 589
             ||| |||||||| | ||||||||||||||||||||||||||||||||
Sbjct: 91879 atggtgatcttcgcagcaagttggaggagatgtttgatatacagggg 91925



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 177/224 (79%)
 Strand = Plus / Plus

                                                                         
Query: 263   ggttgcagattatttggaattgagataagatctgctgtggaagaaacacaacctgtggta 322
             ||||||||||||||||||||||| ||||| || ||||| |||||| | |  ||||  |  
Sbjct: 91523 ggttgcagattatttggaattgaaataagctcagctgtagaagaagccctgcctgcagct 91582

                                                                         
Query: 323   actgtttcaggtgatggttatgaccaaacagctgcatctgtagacgtggactctggcgag 382
             |||||||||||||  |||||||| ||||| | |   |||||||| ||||||||||   ||
Sbjct: 91583 actgtttcaggtgtcggttatgatcaaactgttctctctgtagatgtggactctgatcag 91642

                                                                         
Query: 383   ctctcgcagccatccaatatcaacaactctggtgcccaagcagcaagcagtgagcgtgct 442
              |||| |||||||| |||  ||| || || | |||||  | | |||||||||| ||| ||
Sbjct: 91643 atctcacagccatctaatggcaataaatccgatgcccctggaacaagcagtgaacgttct 91702

                                                         
Query: 443   cttcttgacacccaaacccgccaagttagaagctgcacaaaggt 486
             | ||||||  ||||||  || ||||| || ||||||||||||||
Sbjct: 91703 cctcttgagtcccaaagtcgtcaagtgaggagctgcacaaaggt 91746



 Score = 46.1 bits (23), Expect = 0.13
 Identities = 56/67 (83%)
 Strand = Plus / Plus

                                                                         
Query: 50    ggactatggaagtccccagctgaaccaagccaaaccctatcattttcagagccacaacag 109
             |||||||||||  ||||| ||||| ||  |||||| || |||||||| || ||||||| |
Sbjct: 91271 ggactatggaaacccccatctgaagcagcccaaactctctcattttcggaaccacaacgg 91330

                    
Query: 110   gctcgag 116
             |||||||
Sbjct: 91331 gctcgag 91337



 Score = 40.1 bits (20), Expect = 8.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 11    gcttcaccttctgtggttccagaacttgctcc 42
             |||||||||||||||||| | |||||| ||||
Sbjct: 90934 gcttcaccttctgtggttgcggaacttcctcc 90965
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>gb|AY107195.1| Zea mays PCO096052 mRNA sequence
          Length = 2179

 Score =  113 bits (57), Expect = 7e-22
 Identities = 222/277 (80%)
 Strand = Plus / Plus

                                                                        
Query: 258  ctggtggttgcagattatttggaattgagataagatctgctgtggaagaaacacaacctg 317
            |||||||||| ||||| ||||||||| | ||| | || |||| |||||||  |  |||||
Sbjct: 996  ctggtggttgtagattgtttggaattaatatatgctcagctgaggaagaagtattacctg 1055

                                                                        
Query: 318  tggtaactgtttcaggtgatggttatgaccaaacagctgcatctgtagacgtggactctg 377
             ||| |||| | |||||| ||||||||| || || ||||| ||||||||  || |||| |
Sbjct: 1056 aggttactgctccaggtgttggttatgagcagactgctgcctctgtagagttgaactcgg 1115

                                                                        
Query: 378  gcgagctctcgcagccatccaatatcaacaactctggtgcccaagcagcaagcagtgagc 437
               ||||||| ||||||||  || ||||||| |||| ||||| |||||| |||||||| |
Sbjct: 1116 ataagctctcacagccatctgatgtcaacaattctgatgccctagcagctagcagtgaac 1175

                                                                        
Query: 438  gtgctcttcttgacacccaaacccgccaagttagaagctgcacaaaggtaattatgacag 497
            || | | ||||||  |||||| ||| ||||| || ||||| || ||||||||||||  ||
Sbjct: 1176 gttcacctcttgaatcccaaagccggcaagtgaggagctgtaccaaggtaattatgcaag 1235

                                                 
Query: 498  gaatggcagttggaagagcagtggacttgacaaagct 534
            |||||||||| ||||| || || ||| ||||||||||
Sbjct: 1236 gaatggcagtaggaagggctgtagacctgacaaagct 1272
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>ref|XM_466220.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 3110

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                        
Query: 464  caagttagaagctgcacaaaggtaattatgacaggaatggcagttggaagagcagtggac 523
            ||||| || |||||||| ||||| || |||  |||||||||||||||||| |||||||||
Sbjct: 1940 caagtgaggagctgcaccaaggtcatcatgcaaggaatggcagttggaagggcagtggac 1999

                                                                       
Query: 524  ttgacaaagctatatgggtatgttgatcttcaccgcaagttggaggagatgtttgatat 582
             |||||| |||  |||| |||| |||||||| | ||||||| || ||||||||||||||
Sbjct: 2000 ctgacaaggctccatggatatgatgatcttcgctgcaagttagaagagatgtttgatat 2058



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 266  tgcagattatttggaattgagataagatctgctgtggaag 305
            |||||||| |||||||| |||||||| |||||||||||||
Sbjct: 1742 tgcagattgtttggaatcgagataagctctgctgtggaag 1781
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>dbj|AK070026.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023036G16, full
            insert sequence
          Length = 3106

 Score = 93.7 bits (47), Expect = 6e-16
 Identities = 101/119 (84%)
 Strand = Plus / Plus

                                                                        
Query: 464  caagttagaagctgcacaaaggtaattatgacaggaatggcagttggaagagcagtggac 523
            ||||| || |||||||| ||||| || |||  |||||||||||||||||| |||||||||
Sbjct: 1940 caagtgaggagctgcaccaaggtcatcatgcaaggaatggcagttggaagggcagtggac 1999

                                                                       
Query: 524  ttgacaaagctatatgggtatgttgatcttcaccgcaagttggaggagatgtttgatat 582
             |||||| |||  |||| |||| |||||||| | ||||||| || ||||||||||||||
Sbjct: 2000 ctgacaaggctccatggatatgatgatcttcgctgcaagttagaagagatgtttgatat 2058



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                    
Query: 266  tgcagattatttggaattgagataagatctgctgtggaag 305
            |||||||| |||||||| |||||||| |||||||||||||
Sbjct: 1742 tgcagattgtttggaatcgagataagctctgctgtggaag 1781
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                            
Query: 496      aggaatggcagttggaagagcagtggacttgacaaagctatatgggtatgttgatcttca 555
                |||||||||||||||||| ||||||||| |||||| |||  |||| |||| |||||||| 
Sbjct: 21122141 aggaatggcagttggaagggcagtggacctgacaaggctccatggatatgatgatcttcg 21122200

                                           
Query: 556      ccgcaagttggaggagatgtttgatat 582
                | ||||||| || ||||||||||||||
Sbjct: 21122201 ctgcaagttagaagagatgtttgatat 21122227



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                        
Query: 266      tgcagattatttggaattgagataagatctgctgtggaag 305
                |||||||| |||||||| |||||||| |||||||||||||
Sbjct: 21121831 tgcagattgtttggaatcgagataagctctgctgtggaag 21121870
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>dbj|AP005808.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OSJNBb0038F20
          Length = 129595

 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 76/87 (87%)
 Strand = Plus / Plus

                                                                         
Query: 496   aggaatggcagttggaagagcagtggacttgacaaagctatatgggtatgttgatcttca 555
             |||||||||||||||||| ||||||||| |||||| |||  |||| |||| |||||||| 
Sbjct: 28857 aggaatggcagttggaagggcagtggacctgacaaggctccatggatatgatgatcttcg 28916

                                        
Query: 556   ccgcaagttggaggagatgtttgatat 582
             | ||||||| || ||||||||||||||
Sbjct: 28917 ctgcaagttagaagagatgtttgatat 28943



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 37/40 (92%)
 Strand = Plus / Plus

                                                     
Query: 266   tgcagattatttggaattgagataagatctgctgtggaag 305
             |||||||| |||||||| |||||||| |||||||||||||
Sbjct: 28547 tgcagattgtttggaatcgagataagctctgctgtggaag 28586
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>gb|BT023965.1| Zea mays clone EL01N0409H12 mRNA sequence
          Length = 1813

 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 91/110 (82%)
 Strand = Plus / Plus

                                                                        
Query: 473  agctgcacaaaggtaattatgacaggaatggcagttggaagagcagtggacttgacaaag 532
            |||||||| |||||||| |||  |||  |||| ||||| || || ||||||||||| | |
Sbjct: 1005 agctgcaccaaggtaatcatgcaaggggtggcggttggcagggcggtggacttgacgagg 1064

                                                              
Query: 533  ctatatgggtatgttgatcttcaccgcaagttggaggagatgtttgatat 582
            ||| ||||||| | ||| || | ||||||||||||||||||||| |||||
Sbjct: 1065 ctagatgggtacgatgacctccgccgcaagttggaggagatgttcgatat 1114
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>gb|AY103841.1| Zea mays PCO136641 mRNA sequence
          Length = 1191

 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 90/110 (81%)
 Strand = Plus / Plus

                                                                       
Query: 473 agctgcacaaaggtaattatgacaggaatggcagttggaagagcagtggacttgacaaag 532
           |||||||| |||||||| |||  |||  |||| |||||  | || ||||||||||| | |
Sbjct: 341 agctgcaccaaggtaatcatgcaaggggtggcggttggccgggcggtggacttgacgagg 400

                                                             
Query: 533 ctatatgggtatgttgatcttcaccgcaagttggaggagatgtttgatat 582
           ||| ||||||| | ||| || | ||||||||||||||||||||| |||||
Sbjct: 401 ctagatgggtacgatgacctccgccgcaagttggaggagatgttcgatat 450
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>ref|XM_630812.1| Dictyostelium discoideum hypothetical protein (DDB0191392), partial
            mRNA
          Length = 1278

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 180  cagcaagagaatcaagagaag 200
            |||||||||||||||||||||
Sbjct: 1097 cagcaagagaatcaagagaag 1117
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>gb|AY392428.1| Dictyostelium discoideum DNA repair protein RAD50 gene, complete cds
          Length = 1538

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 180  cagcaagagaatcaagagaag 200
            |||||||||||||||||||||
Sbjct: 1347 cagcaagagaatcaagagaag 1367
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>emb|AL669834.10| Mouse DNA sequence from clone RP23-114O4 on chromosome 4, complete
             sequence
          Length = 147248

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 418   ccaagcagcaagcagtgagcg 438
             |||||||||||||||||||||
Sbjct: 71095 ccaagcagcaagcagtgagcg 71075
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>ref|NM_128916.1| Arabidopsis thaliana unknown protein AT2G33560 mRNA, complete cds
          Length = 1475

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  tctcatcatcatcaaacgtt 157
            ||||||||||||||||||||
Sbjct: 1154 tctcatcatcatcaaacgtt 1173
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>gb|CP000079.1| Leishmania major strain Friedlin chromosome 27, complete sequence
          Length = 1130447

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 179    ccagcaagagaatcaagaga 198
              ||||||||||||||||||||
Sbjct: 933188 ccagcaagagaatcaagaga 933207
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>gb|AY376158.1| Naegleria fowleri isolate 7852 small subunit ribosomal RNA gene,
           partial sequence; mitochondrial
          Length = 1503

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 tgagcgaaagcttgaaccag 254
           ||||||||||||||||||||
Sbjct: 344 tgagcgaaagcttgaaccag 363
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>gb|AY376157.1| Naegleria fowleri isolate 7853 small subunit ribosomal RNA gene,
           partial sequence; mitochondrial
          Length = 1488

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 tgagcgaaagcttgaaccag 254
           ||||||||||||||||||||
Sbjct: 336 tgagcgaaagcttgaaccag 355
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>gb|AY376156.1| Naegleria fowleri isolate 7845 small subunit ribosomal RNA gene,
           partial sequence; mitochondrial
          Length = 1508

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 tgagcgaaagcttgaaccag 254
           ||||||||||||||||||||
Sbjct: 347 tgagcgaaagcttgaaccag 366
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>gb|AY376155.1| Naegleria lovaniensis isolate 7372 small subunit ribosomal RNA
           gene, partial sequence; mitochondrial
          Length = 1485

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 tgagcgaaagcttgaaccag 254
           ||||||||||||||||||||
Sbjct: 344 tgagcgaaagcttgaaccag 363
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>gb|AY376154.1| Naegleria jadini isolate 7858 small subunit ribosomal RNA gene,
           partial sequence; mitochondrial
          Length = 1492

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 tgagcgaaagcttgaaccag 254
           ||||||||||||||||||||
Sbjct: 328 tgagcgaaagcttgaaccag 347
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>gb|AY376153.1| Naegleria gruberi isolate 7860 small subunit ribosomal RNA gene,
           partial sequence; mitochondrial
          Length = 1475

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 tgagcgaaagcttgaaccag 254
           ||||||||||||||||||||
Sbjct: 302 tgagcgaaagcttgaaccag 321
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>gb|AY376152.1| Naegleria australiensis isolate 7857 small subunit ribosomal RNA
           gene, partial sequence; mitochondrial
          Length = 1498

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 235 tgagcgaaagcttgaaccag 254
           ||||||||||||||||||||
Sbjct: 326 tgagcgaaagcttgaaccag 345
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>gb|AC132344.3| Mus musculus BAC clone RP24-177A17 from chromosome 13, complete sequence
          Length = 169661

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 398    aatatcaacaactctggtgc 417
              ||||||||||||||||||||
Sbjct: 165846 aatatcaacaactctggtgc 165865
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>gb|AC124687.4| Mus musculus BAC clone RP24-447D15 from chromosome 13, complete
            sequence
          Length = 176871

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 398  aatatcaacaactctggtgc 417
            ||||||||||||||||||||
Sbjct: 4435 aatatcaacaactctggtgc 4454
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>emb|AL663066.12| Mouse DNA sequence from clone RP23-416K12 on chromosome 11 Contains the
              5' end of a novel genes, an H+ transporting ATPase V1
              subunit G isoform 1 (Atp6v1g1) pseudogene, an upstream
              transcription factor 1 (Usf1) pseudogene, the 5' end of the
              Ssh2 gene for slingshot homolog 2 (Drosophila) and a CpG
              island, complete sequence
          Length = 160589

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 157    tgcattcaatcagttctact 176
              ||||||||||||||||||||
Sbjct: 136072 tgcattcaatcagttctact 136053
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>emb|BX957344.6| Zebrafish DNA sequence from clone CH211-129N15 in linkage group 19,
              complete sequence
          Length = 168128

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 462    gccaagttagaagctgcaca 481
              ||||||||||||||||||||
Sbjct: 157581 gccaagttagaagctgcaca 157600
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>gb|AC068327.14| Homo sapiens chromosome 15, clone RP11-394G8, complete sequence
          Length = 177539

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 403    caacaactctggtgcccaag 422
              ||||||||||||||||||||
Sbjct: 112685 caacaactctggtgcccaag 112666
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>gb|AC002332.3| Arabidopsis thaliana chromosome 2 clone F4P9 map ve015, complete sequence
          Length = 152593

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 138    tctcatcatcatcaaacgtt 157
              ||||||||||||||||||||
Sbjct: 117876 tctcatcatcatcaaacgtt 117857
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>dbj|AK134152.1| Mus musculus adult male thymus cDNA, RIKEN full-length enriched
            library, clone:5830458B03 product:unclassifiable, full
            insert sequence
          Length = 3551

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 157  tgcattcaatcagttctact 176
            ||||||||||||||||||||
Sbjct: 1939 tgcattcaatcagttctact 1920
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>gb|AC155289.11| Mus musculus 6 BAC RP24-137B5 (Roswell Park Cancer Institute (C57BL/6J
             Male) Mouse BAC Library) complete sequence
          Length = 133835

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 471   gaagctgcacaaaggtaatt 490
             ||||||||||||||||||||
Sbjct: 57435 gaagctgcacaaaggtaatt 57416
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>emb|BX855596.4| Mouse DNA sequence from clone RP23-89N14 on chromosome 4, complete
             sequence
          Length = 35553

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 181   agcaagagaatcaagagaag 200
             ||||||||||||||||||||
Sbjct: 24272 agcaagagaatcaagagaag 24291
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>gb|AC160406.6| Mus musculus 10 BAC RP24-406K6 (Roswell Park Cancer Institute (C57BL/6J
              Male) Mouse BAC Library) complete sequence
          Length = 178599

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    aaaggtaattatgacaggaa 500
              ||||||||||||||||||||
Sbjct: 124845 aaaggtaattatgacaggaa 124826
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>gb|AC159620.2| Mus musculus BAC clone RP24-354K18 from chromosome 12, complete
             sequence
          Length = 155161

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 179   ccagcaagagaatcaagagaagac 202
             ||||||||||||| ||||||||||
Sbjct: 88334 ccagcaagagaatgaagagaagac 88311
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>gb|AC097467.1| Homo sapiens BAC clone RP11-27G13 from 4, complete sequence
          Length = 178204

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 320   gtaactgtttcaggtgatggttat 343
             |||||||||| |||||||||||||
Sbjct: 25766 gtaactgtttgaggtgatggttat 25743
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>gb|AF288092.1| Naegleria gruberi mitochondrial DNA, complete genome
          Length = 49843

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 235   tgagcgaaagcttgaaccag 254
             ||||||||||||||||||||
Sbjct: 48630 tgagcgaaagcttgaaccag 48649
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>gb|AY088206.1| Arabidopsis thaliana clone 42992 mRNA, complete sequence
          Length = 1476

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 138  tctcatcatcatcaaacgtt 157
            ||||||||||||||||||||
Sbjct: 1154 tctcatcatcatcaaacgtt 1173
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>gb|AC153513.6| Mus musculus 10 BAC RP23-322K8 (Roswell Park Cancer Institute (C57BL/6J
              Female) Mouse BAC Library) complete sequence
          Length = 223529

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 481    aaaggtaattatgacaggaa 500
              ||||||||||||||||||||
Sbjct: 206786 aaaggtaattatgacaggaa 206767
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>gb|AF008938.1| Vibrio cholerae V86 phage putative replication protein gene, complete
            cds
          Length = 5951

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 9    ccgcttcaccttctgtggtt 28
            ||||||||||||||||||||
Sbjct: 5880 ccgcttcaccttctgtggtt 5861
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>gb|AF125163.2| Bacteriophage K139, complete genome
          Length = 33106

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 9     ccgcttcaccttctgtggtt 28
             ||||||||||||||||||||
Sbjct: 10170 ccgcttcaccttctgtggtt 10151
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>emb|AL669898.17| Mouse DNA sequence from clone RP23-6C3 on chromosome X, complete sequence
          Length = 220201

 Score = 40.1 bits (20), Expect = 8.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 418    ccaagcagcaagcagtgagc 437
              ||||||||||||||||||||
Sbjct: 190488 ccaagcagcaagcagtgagc 190507


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 5,503,755
Number of Sequences: 3902068
Number of extensions: 5503755
Number of successful extensions: 102762
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 43
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 102608
Number of HSP's gapped (non-prelim): 154
length of query: 589
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 566
effective length of database: 17,143,297,704
effective search space: 9703106500464
effective search space used: 9703106500464
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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