ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal32l10
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_187458.1| Oryza sativa (japonica cultivar-group), predic... 109 1e-20
2gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 109 1e-20
3gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome... 109 1e-20
4dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 109 1e-20
5dbj|AK065578.1| Oryza sativa (japonica cultivar-group) cDNA clon... 109 1e-20
6gb|AY105790.1| Zea mays PCO079761 mRNA sequence 50 0.008
7gb|BT018387.1| Zea mays clone EL01N0313G10.d mRNA sequence 46 0.13
8gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete ge... 44 0.50
9gb|AC105748.2| Homo sapiens chromosome 3 clone RP11-532I6, compl... 42 2.0
10gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome 40 7.8
11gb|AC115360.6| Mus musculus BAC clone RP23-191N22 from chromosom... 40 7.8
12gb|AC124552.3| Mus musculus BAC clone RP23-222M11 from chromosom... 40 7.8
13gb|DQ153984.1| Gossypium arboreum auxin response factor 2 (ARF2)... 40 7.8
14gb|BC053925.1| Mus musculus cDNA clone IMAGE:6311688, partial cds 40 7.8
15gb|BC068307.1| Mus musculus lysyl oxidase-like 4, mRNA (cDNA clo... 40 7.8
16dbj|AK031666.1| Mus musculus 13 days embryo male testis cDNA, RI... 40 7.8
17dbj|AK078840.1| Mus musculus adult male colon cDNA, RIKEN full-l... 40 7.8
18dbj|AK014773.1| Mus musculus 0 day neonate head cDNA, RIKEN full... 40 7.8
19ref|NM_053083.2| Mus musculus lysyl oxidase-like 4 (Loxl4), mRNA 40 7.8
20gb|AC101774.6| Mus musculus chromosome 19, clone RP24-113J17, co... 40 7.8
21emb|AL672266.9| Mouse DNA sequence from clone RP23-342A10 on chr... 40 7.8 
>ref|NM_187458.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 975

 Score =  109 bits (55), Expect = 1e-20
 Identities = 133/159 (83%)
 Strand = Plus / Plus

                                                                       
Query: 287 accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 346
           ||||||||||||| |||||| ||||||||||   ||||||||| ||| |||||| || ||
Sbjct: 659 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 718

                                                                       
Query: 347 tttcagcatactacagcaggcgctattctccaaggaacagaagacggagttactctcgca 406
           ||||| ||||||| || ||| |||||||||||||    ||| ||||||| || |||||||
Sbjct: 719 tttcaccatactatagaaggtgctattctccaagtgctagaggacggagctattctcgca 778

                                                  
Query: 407 gcgtatcaccacgcaggagctactcccgtagctgctccc 445
           | |||||||| |  ||||||||||||| |||||| ||||
Sbjct: 779 gtgtatcacctcagaggagctactcccatagctgttccc 817



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 138/171 (80%)
 Strand = Plus / Plus

                                                                       
Query: 13  agagaccgttacggctcacgctacccgcccgagctagaacgttcttattctccttatcgc 72
           |||||||| ||| | ||||||||| | || |||| |||||| ||||||||||||||| | 
Sbjct: 394 agagaccgctacagttcacgctactcacctgagcgagaacggtcttattctccttatggt 453

                                                                       
Query: 73  agaggacgatcatactctcgtcatgacaggcatagatcatactccccctatggaaggagg 132
           ||| | |||||||| ||||   |  ||||||  |||||||||||||||||||  ||| | 
Sbjct: 454 agaaggcgatcatattctccatacaacaggcgaagatcatactccccctatgagaggcgt 513

                                                              
Query: 133 ccatcctactccccctatgaaaggaggccatcctactctccctatggcaga 183
             ||||||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 514 agatcctactctccacatgaaaggagacagtcctactctccgtatggcaga 564
to top
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  109 bits (55), Expect = 1e-20
 Identities = 133/159 (83%)
 Strand = Plus / Minus

                                                                           
Query: 287     accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 346
               ||||||||||||| |||||| ||||||||||   ||||||||| ||| |||||| || ||
Sbjct: 8740436 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 8740377

                                                                           
Query: 347     tttcagcatactacagcaggcgctattctccaaggaacagaagacggagttactctcgca 406
               ||||| ||||||| || ||| |||||||||||||    ||| ||||||| || |||||||
Sbjct: 8740376 tttcaccatactatagaaggtgctattctccaagtgctagaggacggagctattctcgca 8740317

                                                      
Query: 407     gcgtatcaccacgcaggagctactcccgtagctgctccc 445
               | |||||||| |  ||||||||||||| |||||| ||||
Sbjct: 8740316 gtgtatcacctcagaggagctactcccatagctgttccc 8740278



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                           
Query: 13      agagaccgttacggctcacgctacccgcccgagctagaacgttcttattctccttatcgc 72
               |||||||| ||| | ||||||||| | || |||| |||||| ||||||||||||||| | 
Sbjct: 8740701 agagaccgctacagttcacgctactcacctgagcgagaacggtcttattctccttatggt 8740642

                                                                           
Query: 73      agaggacgatcatactctcgtcatgacaggcatagatcatactccccctatggaaggagg 132
               ||| | |||||||| ||||   |  ||||||  |||||||||||||||||||  ||| | 
Sbjct: 8740641 agaaggcgatcatattctccatacaacaggcgaagatcatactccccctatgagaggcgt 8740582

                                                                  
Query: 133     ccatcctactccccctatgaaaggaggccatcctactctccctatggcaga 183
                 ||||||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 8740581 agatcctactctccacatgaaaggagacagtcctactctccgtatggcaga 8740531
to top
>gb|AC135205.4| Oryza sativa (japonica cultivar-group) chromosome 3 clone OJ1012B02,
             complete sequence
          Length = 115270

 Score =  109 bits (55), Expect = 1e-20
 Identities = 133/159 (83%)
 Strand = Plus / Minus

                                                                         
Query: 287   accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 346
             ||||||||||||| |||||| ||||||||||   ||||||||| ||| |||||| || ||
Sbjct: 84087 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 84028

                                                                         
Query: 347   tttcagcatactacagcaggcgctattctccaaggaacagaagacggagttactctcgca 406
             ||||| ||||||| || ||| |||||||||||||    ||| ||||||| || |||||||
Sbjct: 84027 tttcaccatactatagaaggtgctattctccaagtgctagaggacggagctattctcgca 83968

                                                    
Query: 407   gcgtatcaccacgcaggagctactcccgtagctgctccc 445
             | |||||||| |  ||||||||||||| |||||| ||||
Sbjct: 83967 gtgtatcacctcagaggagctactcccatagctgttccc 83929



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                         
Query: 13    agagaccgttacggctcacgctacccgcccgagctagaacgttcttattctccttatcgc 72
             |||||||| ||| | ||||||||| | || |||| |||||| ||||||||||||||| | 
Sbjct: 84352 agagaccgctacagttcacgctactcacctgagcgagaacggtcttattctccttatggt 84293

                                                                         
Query: 73    agaggacgatcatactctcgtcatgacaggcatagatcatactccccctatggaaggagg 132
             ||| | |||||||| ||||   |  ||||||  |||||||||||||||||||  ||| | 
Sbjct: 84292 agaaggcgatcatattctccatacaacaggcgaagatcatactccccctatgagaggcgt 84233

                                                                
Query: 133   ccatcctactccccctatgaaaggaggccatcctactctccctatggcaga 183
               ||||||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 84232 agatcctactctccacatgaaaggagacagtcctactctccgtatggcaga 84182
to top
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score =  109 bits (55), Expect = 1e-20
 Identities = 133/159 (83%)
 Strand = Plus / Minus

                                                                           
Query: 287     accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 346
               ||||||||||||| |||||| ||||||||||   ||||||||| ||| |||||| || ||
Sbjct: 8738271 accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 8738212

                                                                           
Query: 347     tttcagcatactacagcaggcgctattctccaaggaacagaagacggagttactctcgca 406
               ||||| ||||||| || ||| |||||||||||||    ||| ||||||| || |||||||
Sbjct: 8738211 tttcaccatactatagaaggtgctattctccaagtgctagaggacggagctattctcgca 8738152

                                                      
Query: 407     gcgtatcaccacgcaggagctactcccgtagctgctccc 445
               | |||||||| |  ||||||||||||| |||||| ||||
Sbjct: 8738151 gtgtatcacctcagaggagctactcccatagctgttccc 8738113



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 138/171 (80%)
 Strand = Plus / Minus

                                                                           
Query: 13      agagaccgttacggctcacgctacccgcccgagctagaacgttcttattctccttatcgc 72
               |||||||| ||| | ||||||||| | || |||| |||||| ||||||||||||||| | 
Sbjct: 8738536 agagaccgctacagttcacgctactcacctgagcgagaacggtcttattctccttatggt 8738477

                                                                           
Query: 73      agaggacgatcatactctcgtcatgacaggcatagatcatactccccctatggaaggagg 132
               ||| | |||||||| ||||   |  ||||||  |||||||||||||||||||  ||| | 
Sbjct: 8738476 agaaggcgatcatattctccatacaacaggcgaagatcatactccccctatgagaggcgt 8738417

                                                                  
Query: 133     ccatcctactccccctatgaaaggaggccatcctactctccctatggcaga 183
                 ||||||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 8738416 agatcctactctccacatgaaaggagacagtcctactctccgtatggcaga 8738366
to top
>dbj|AK065578.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013026M08, full
            insert sequence
          Length = 1438

 Score =  109 bits (55), Expect = 1e-20
 Identities = 133/159 (83%)
 Strand = Plus / Plus

                                                                        
Query: 287  accgttcaagatccccatacagttacagaaggcggaggtcatgctcccatgaccgttatg 346
            ||||||||||||| |||||| ||||||||||   ||||||||| ||| |||||| || ||
Sbjct: 918  accgttcaagatctccataccgttacagaagagagaggtcatgttcctatgaccattctg 977

                                                                        
Query: 347  tttcagcatactacagcaggcgctattctccaaggaacagaagacggagttactctcgca 406
            ||||| ||||||| || ||| |||||||||||||    ||| ||||||| || |||||||
Sbjct: 978  tttcaccatactatagaaggtgctattctccaagtgctagaggacggagctattctcgca 1037

                                                   
Query: 407  gcgtatcaccacgcaggagctactcccgtagctgctccc 445
            | |||||||| |  ||||||||||||| |||||| ||||
Sbjct: 1038 gtgtatcacctcagaggagctactcccatagctgttccc 1076



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 138/171 (80%)
 Strand = Plus / Plus

                                                                       
Query: 13  agagaccgttacggctcacgctacccgcccgagctagaacgttcttattctccttatcgc 72
           |||||||| ||| | ||||||||| | || |||| |||||| ||||||||||||||| | 
Sbjct: 653 agagaccgctacagttcacgctactcacctgagcgagaacggtcttattctccttatggt 712

                                                                       
Query: 73  agaggacgatcatactctcgtcatgacaggcatagatcatactccccctatggaaggagg 132
           ||| | |||||||| ||||   |  ||||||  |||||||||||||||||||  ||| | 
Sbjct: 713 agaaggcgatcatattctccatacaacaggcgaagatcatactccccctatgagaggcgt 772

                                                              
Query: 133 ccatcctactccccctatgaaaggaggccatcctactctccctatggcaga 183
             ||||||||| ||  |||||||||| |  ||||||||||| |||||||||
Sbjct: 773 agatcctactctccacatgaaaggagacagtcctactctccgtatggcaga 823
to top
>gb|AY105790.1| Zea mays PCO079761 mRNA sequence
          Length = 1402

 Score = 50.1 bits (25), Expect = 0.008
 Identities = 34/37 (91%)
 Strand = Plus / Plus

                                                
Query: 166 tactctccctatggcagaaggagatcatactctcctt 202
           |||||||| |||| ||||||| |||||||||||||||
Sbjct: 826 tactctccatatgacagaaggcgatcatactctcctt 862
to top
>gb|BT018387.1| Zea mays clone EL01N0313G10.d mRNA sequence
          Length = 1493

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                              
Query: 166 tactctccctatggcagaaggagatcatactctcc 200
           |||||||| |||| ||||||| |||||||||||||
Sbjct: 907 tactctccatatgacagaaggcgatcatactctcc 941
to top
>gb|CP000285.1| Chromohalobacter salexigens DSM 3043, complete genome
          Length = 3696649

 Score = 44.1 bits (22), Expect = 0.50
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 496    agcaaggcatcgcgcagcaggtcacc 521
              |||||||||||||||| |||||||||
Sbjct: 352179 agcaaggcatcgcgcaccaggtcacc 352154
to top
>gb|AC105748.2| Homo sapiens chromosome 3 clone RP11-532I6, complete sequence
          Length = 162258

 Score = 42.1 bits (21), Expect = 2.0
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 453    agaagaatcaaggagctgttc 473
              |||||||||||||||||||||
Sbjct: 102941 agaagaatcaaggagctgttc 102961
to top
>gb|CP000096.1| Pelodictyon luteolum DSM 273, complete genome
          Length = 2364842

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 203    ccgacaggtcggagtctccc 222
              ||||||||||||||||||||
Sbjct: 754222 ccgacaggtcggagtctccc 754241
to top
>gb|AC115360.6| Mus musculus BAC clone RP23-191N22 from chromosome 19, complete sequence
          Length = 217325

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 135    atcctactccccctatgaaa 154
              ||||||||||||||||||||
Sbjct: 149635 atcctactccccctatgaaa 149654
to top
>gb|AC124552.3| Mus musculus BAC clone RP23-222M11 from chromosome 19, complete
             sequence
          Length = 237281

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 379   aggaacagaagacggagtta 398
             ||||||||||||||||||||
Sbjct: 94040 aggaacagaagacggagtta 94059
to top
>gb|DQ153984.1| Gossypium arboreum auxin response factor 2 (ARF2) mRNA, complete cds
          Length = 3723

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 477  gcagaaaggatatgctgaaa 496
            ||||||||||||||||||||
Sbjct: 3519 gcagaaaggatatgctgaaa 3500
to top
>gb|BC053925.1| Mus musculus cDNA clone IMAGE:6311688, partial cds
          Length = 3894

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 379  aggaacagaagacggagtta 398
            ||||||||||||||||||||
Sbjct: 1608 aggaacagaagacggagtta 1627
to top
>gb|BC068307.1| Mus musculus lysyl oxidase-like 4, mRNA (cDNA clone MGC:76593
            IMAGE:30059745), complete cds
          Length = 3683

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 379  aggaacagaagacggagtta 398
            ||||||||||||||||||||
Sbjct: 3207 aggaacagaagacggagtta 3226
to top
>dbj|AK031666.1| Mus musculus 13 days embryo male testis cDNA, RIKEN full-length
            enriched library, clone:6030476O14 product:similar to
            MYOFERLIN (FER-1 LIKE PROTEIN 3) [Homo sapiens], full
            insert sequence
          Length = 3927

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 135  atcctactccccctatgaaa 154
            ||||||||||||||||||||
Sbjct: 3832 atcctactccccctatgaaa 3813
to top
>dbj|AK078840.1| Mus musculus adult male colon cDNA, RIKEN full-length enriched
           library, clone:9030013K10 product:hypothetical protein,
           full insert sequence
          Length = 2172

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 379 aggaacagaagacggagtta 398
           ||||||||||||||||||||
Sbjct: 4   aggaacagaagacggagtta 23
to top
>dbj|AK014773.1| Mus musculus 0 day neonate head cDNA, RIKEN full-length enriched
           library, clone:4833426I20 product:lysyl oxidase-like 4,
           full insert sequence
          Length = 1427

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 379 aggaacagaagacggagtta 398
           ||||||||||||||||||||
Sbjct: 968 aggaacagaagacggagtta 987
to top
>ref|NM_053083.2| Mus musculus lysyl oxidase-like 4 (Loxl4), mRNA
          Length = 3683

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 379  aggaacagaagacggagtta 398
            ||||||||||||||||||||
Sbjct: 3207 aggaacagaagacggagtta 3226
to top
>gb|AC101774.6| Mus musculus chromosome 19, clone RP24-113J17, complete sequence
          Length = 209547

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 135    atcctactccccctatgaaa 154
              ||||||||||||||||||||
Sbjct: 150320 atcctactccccctatgaaa 150301
to top
>emb|AL672266.9| Mouse DNA sequence from clone RP23-342A10 on chromosome X, complete
              sequence
          Length = 216754

 Score = 40.1 bits (20), Expect = 7.8
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 477    gcagaaaggatatgctgaaagcaa 500
              ||||| ||||||||||||||||||
Sbjct: 156224 gcagagaggatatgctgaaagcaa 156247


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,108,698
Number of Sequences: 3902068
Number of extensions: 3108698
Number of successful extensions: 52162
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 52016
Number of HSP's gapped (non-prelim): 126
length of query: 576
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 553
effective length of database: 17,143,297,704
effective search space: 9480243630312
effective search space used: 9480243630312
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
to top