| Clone Name | baal32k18 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_483211.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1507 Score = 648 bits (327), Expect = 0.0 Identities = 459/503 (91%) Strand = Plus / Plus Query: 20 ggcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgca 79 ||||||||||||| || ||||||||||||||||| || || || || |||||||||||| Sbjct: 587 ggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgca 646 Query: 80 tggacgagtggggcgtggacgtggcgctgacggggtcgcagaaggcgctgtcgctgccga 139 |||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 647 tggatgagtggggagtggacgtggcgctgacgggttcgcagaaggcgctctcgctgccga 706 Query: 140 cggggctgggaatcgtgtgcgccagccccaaggcgctggaggcggccaagacggccaagt 199 |||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 707 cgggtctgggcatcgtgtgcgcgagccccaaggcgctggaggcgagcaagacggccaagt 766 Query: 200 cggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 259 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 cggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 826 Query: 260 ggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcctct 319 |||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| ||| Sbjct: 827 ggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcatct 886 Query: 320 tcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaaggc 379 ||||||| |||||||| ||||||||||||||||||| |||||||||||||| || |||| Sbjct: 887 tcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccaggc 946 Query: 380 tggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcgaca 439 |||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 947 tggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcgaca 1006 Query: 440 cggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgcat 499 | ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| | Sbjct: 1007 ccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgcct 1066 Query: 500 ggaagcggtacaacctcagcctc 522 ||||||||||||||||||||||| Sbjct: 1067 ggaagcggtacaacctcagcctc 1089
>ref|XM_507283.1| PREDICTED Oryza sativa (japonica cultivar-group), OJ1345_D02.38 mRNA Length = 1567 Score = 648 bits (327), Expect = 0.0 Identities = 459/503 (91%) Strand = Plus / Plus Query: 20 ggcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgca 79 ||||||||||||| || ||||||||||||||||| || || || || |||||||||||| Sbjct: 579 ggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgca 638 Query: 80 tggacgagtggggcgtggacgtggcgctgacggggtcgcagaaggcgctgtcgctgccga 139 |||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 639 tggatgagtggggagtggacgtggcgctgacgggttcgcagaaggcgctctcgctgccga 698 Query: 140 cggggctgggaatcgtgtgcgccagccccaaggcgctggaggcggccaagacggccaagt 199 |||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 699 cgggtctgggcatcgtgtgcgcgagccccaaggcgctggaggcgagcaagacggccaagt 758 Query: 200 cggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 259 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 cggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 818 Query: 260 ggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcctct 319 |||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| ||| Sbjct: 819 ggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcatct 878 Query: 320 tcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaaggc 379 ||||||| |||||||| ||||||||||||||||||| |||||||||||||| || |||| Sbjct: 879 tcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccaggc 938 Query: 380 tggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcgaca 439 |||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 939 tggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcgaca 998 Query: 440 cggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgcat 499 | ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| | Sbjct: 999 ccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgcct 1058 Query: 500 ggaagcggtacaacctcagcctc 522 ||||||||||||||||||||||| Sbjct: 1059 ggaagcggtacaacctcagcctc 1081
>dbj|AK099206.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013049F20, full insert sequence Length = 1321 Score = 648 bits (327), Expect = 0.0 Identities = 459/503 (91%) Strand = Plus / Plus Query: 20 ggcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgca 79 ||||||||||||| || ||||||||||||||||| || || || || |||||||||||| Sbjct: 353 ggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgca 412 Query: 80 tggacgagtggggcgtggacgtggcgctgacggggtcgcagaaggcgctgtcgctgccga 139 |||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 413 tggatgagtggggagtggacgtggcgctgacgggttcgcagaaggcgctctcgctgccga 472 Query: 140 cggggctgggaatcgtgtgcgccagccccaaggcgctggaggcggccaagacggccaagt 199 |||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 473 cgggtctgggcatcgtgtgcgcgagccccaaggcgctggaggcgagcaagacggccaagt 532 Query: 200 cggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 259 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 533 cggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 592 Query: 260 ggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcctct 319 |||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| ||| Sbjct: 593 ggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcatct 652 Query: 320 tcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaaggc 379 ||||||| |||||||| ||||||||||||||||||| |||||||||||||| || |||| Sbjct: 653 tcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccaggc 712 Query: 380 tggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcgaca 439 |||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 713 tggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcgaca 772 Query: 440 cggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgcat 499 | ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| | Sbjct: 773 ccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgcct 832 Query: 500 ggaagcggtacaacctcagcctc 522 ||||||||||||||||||||||| Sbjct: 833 ggaagcggtacaacctcagcctc 855
>dbj|AK065126.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001P06, full insert sequence Length = 1507 Score = 648 bits (327), Expect = 0.0 Identities = 459/503 (91%) Strand = Plus / Plus Query: 20 ggcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgca 79 ||||||||||||| || ||||||||||||||||| || || || || |||||||||||| Sbjct: 587 ggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgca 646 Query: 80 tggacgagtggggcgtggacgtggcgctgacggggtcgcagaaggcgctgtcgctgccga 139 |||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 647 tggatgagtggggagtggacgtggcgctgacgggttcgcagaaggcgctctcgctgccga 706 Query: 140 cggggctgggaatcgtgtgcgccagccccaaggcgctggaggcggccaagacggccaagt 199 |||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 707 cgggtctgggcatcgtgtgcgcgagccccaaggcgctggaggcgagcaagacggccaagt 766 Query: 200 cggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 259 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 767 cggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 826 Query: 260 ggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcctct 319 |||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| ||| Sbjct: 827 ggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcatct 886 Query: 320 tcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaaggc 379 ||||||| |||||||| ||||||||||||||||||| |||||||||||||| || |||| Sbjct: 887 tcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccaggc 946 Query: 380 tggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcgaca 439 |||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 947 tggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcgaca 1006 Query: 440 cggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgcat 499 | ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| | Sbjct: 1007 ccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgcct 1066 Query: 500 ggaagcggtacaacctcagcctc 522 ||||||||||||||||||||||| Sbjct: 1067 ggaagcggtacaacctcagcctc 1089
>dbj|AK064774.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000A23, full insert sequence Length = 1567 Score = 640 bits (323), Expect = e-180 Identities = 458/503 (91%) Strand = Plus / Plus Query: 20 ggcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgca 79 ||||||||||||| || ||||||||||||||||| || || || || |||||||||||| Sbjct: 579 ggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgca 638 Query: 80 tggacgagtggggcgtggacgtggcgctgacggggtcgcagaaggcgctgtcgctgccga 139 |||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 639 tggatgagtggggagtggacgtggcgctgacgggttcgcagaaggcgctctcgctgccga 698 Query: 140 cggggctgggaatcgtgtgcgccagccccaaggcgctggaggcggccaagacggccaagt 199 | || ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 699 caggtctgggcatcgtgtgcgcgagccccaaggcgctggaggcgagcaagacggccaagt 758 Query: 200 cggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 259 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 759 cggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 818 Query: 260 ggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcctct 319 |||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| ||| Sbjct: 819 ggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcatct 878 Query: 320 tcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaaggc 379 ||||||| |||||||| ||||||||||||||||||| |||||||||||||| || |||| Sbjct: 879 tcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgccaccaggc 938 Query: 380 tggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcgaca 439 |||| |||| ||||||||||||||||||||||| ||||||||||| |||||||||| Sbjct: 939 tggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagcgaca 998 Query: 440 cggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgcat 499 | ||||||||||||||||||||||| |||||||||||| ||||||||| |||||||| | Sbjct: 999 ccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcacgcct 1058 Query: 500 ggaagcggtacaacctcagcctc 522 ||||||||||||||||||||||| Sbjct: 1059 ggaagcggtacaacctcagcctc 1081
>gb|AY107617.1| Zea mays PCO084394 mRNA sequence Length = 1016 Score = 527 bits (266), Expect = e-146 Identities = 440/498 (88%) Strand = Plus / Plus Query: 21 gcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcat 80 ||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||| Sbjct: 60 gcacccggcgctgctgctggtggacggcgtgtcgtccatctgcgcgctggacttccgcat 119 Query: 81 ggacgagtggggcgtggacgtggcgctgacggggtcgcagaaggcgctgtcgctgccgac 140 ||||||||||||||||||||||||||| ||||| |||||||||||||||||| ||||||| Sbjct: 120 ggacgagtggggcgtggacgtggcgctcacgggctcgcagaaggcgctgtcgatgccgac 179 Query: 141 ggggctgggaatcgtgtgcgccagccccaaggcgctggaggcggccaagacggccaagtc 200 |||| |||| ||||||||||||||||||| |||||||||||| ||||||||||| ||| Sbjct: 180 ggggatgggcatcgtgtgcgccagccccagggcgctggaggccagcaagacggccaggtc 239 Query: 201 ggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcacctactg 260 |||||||||||||||||||||||||||||||||| ||||||| | |||||||| ||||| Sbjct: 240 cgtgcgcgtcttcttcgactggaaggactacctcaggttctacgacatgggcacgtactg 299 Query: 261 gccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcctctt 320 |||||||||||| ||||||||||||||||||||||| ||| ||| ||||||||| |||| Sbjct: 300 gccctacacgccctccatccagctcctctacggcctccgcaccgcgctcgacctcatctt 359 Query: 321 cgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaaggct 380 |||||| || || ||||||||| | | |||||||| ||||| || || || || ||||| Sbjct: 360 cgaggaagggctggacaacgtcgtgaggaggcacaaccgccttgggacagccaccaggct 419 Query: 381 ggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagcgacac 440 || || | ||||||||||||| |||||| | ||||||||||| ||||||||||| Sbjct: 420 cgccgtcgaggcgtgggggctcagcaactgctgccagaaggaggagtggttcagcgacac 479 Query: 441 ggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcacgcatg 500 |||||||||| |||||||||||| ||||||||||| |||| |||||| |||||| || Sbjct: 480 cgtcaccgccgccgtcgtgccgcccaacatcgacagcgccgaggtcgtcaggcacgcgtg 539 Query: 501 gaagcggtacaacctcag 518 |||||||||||||||||| Sbjct: 540 gaagcggtacaacctcag 557
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 476 bits (240), Expect = e-131 Identities = 324/352 (92%) Strand = Plus / Minus Query: 20 ggcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgca 79 ||||||||||||| || ||||||||||||||||| || || || || |||||||||||| Sbjct: 24822074 ggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgca 24822015 Query: 80 tggacgagtggggcgtggacgtggcgctgacggggtcgcagaaggcgctgtcgctgccga 139 |||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 24822014 tggatgagtggggagtggacgtggcgctgacgggttcgcagaaggcgctctcgctgccga 24821955 Query: 140 cggggctgggaatcgtgtgcgccagccccaaggcgctggaggcggccaagacggccaagt 199 |||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 24821954 cgggtctgggcatcgtgtgcgcgagccccaaggcgctggaggcgagcaagacggccaagt 24821895 Query: 200 cggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 259 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 24821894 cggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 24821835 Query: 260 ggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcctct 319 |||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| ||| Sbjct: 24821834 ggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcatct 24821775 Query: 320 tcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgc 371 ||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 24821774 tcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgc 24821723 Score = 180 bits (91), Expect = 3e-42 Identities = 133/147 (90%) Strand = Plus / Minus Query: 376 aggctggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagc 435 |||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 24821625 aggctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagc 24821566 Query: 436 gacacggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcac 495 ||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||| Sbjct: 24821565 gacaccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcac 24821506 Query: 496 gcatggaagcggtacaacctcagcctc 522 || |||||||||||||||||||||||| Sbjct: 24821505 gcctggaagcggtacaacctcagcctc 24821479 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctcgacctcctcttcgaggag 327 ||||||||||||||||||||| Sbjct: 9175049 ctcgacctcctcttcgaggag 9175029
>dbj|AP003892.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1345_D02 Length = 159613 Score = 476 bits (240), Expect = e-131 Identities = 324/352 (92%) Strand = Plus / Minus Query: 20 ggcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgca 79 ||||||||||||| || ||||||||||||||||| || || || || |||||||||||| Sbjct: 122875 ggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgca 122816 Query: 80 tggacgagtggggcgtggacgtggcgctgacggggtcgcagaaggcgctgtcgctgccga 139 |||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 122815 tggatgagtggggagtggacgtggcgctgacgggttcgcagaaggcgctctcgctgccga 122756 Query: 140 cggggctgggaatcgtgtgcgccagccccaaggcgctggaggcggccaagacggccaagt 199 |||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 122755 cgggtctgggcatcgtgtgcgcgagccccaaggcgctggaggcgagcaagacggccaagt 122696 Query: 200 cggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 259 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 122695 cggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 122636 Query: 260 ggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcctct 319 |||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| ||| Sbjct: 122635 ggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcatct 122576 Query: 320 tcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgc 371 ||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 122575 tcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgc 122524 Score = 180 bits (91), Expect = 3e-42 Identities = 133/147 (90%) Strand = Plus / Minus Query: 376 aggctggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagc 435 |||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 122426 aggctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagc 122367 Query: 436 gacacggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcac 495 ||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||| Sbjct: 122366 gacaccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcac 122307 Query: 496 gcatggaagcggtacaacctcagcctc 522 || |||||||||||||||||||||||| Sbjct: 122306 gcctggaagcggtacaacctcagcctc 122280
>dbj|AP004190.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OJ1506_F01 Length = 121202 Score = 476 bits (240), Expect = e-131 Identities = 324/352 (92%) Strand = Plus / Minus Query: 20 ggcacccggcgctgctgctggtggacggggtgtcgtccatctgcgcactggacttccgca 79 ||||||||||||| || ||||||||||||||||| || || || || |||||||||||| Sbjct: 26520 ggcacccggcgctactactggtggacggggtgtcatcgatatgtgcgttggacttccgca 26461 Query: 80 tggacgagtggggcgtggacgtggcgctgacggggtcgcagaaggcgctgtcgctgccga 139 |||| |||||||| |||||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 26460 tggatgagtggggagtggacgtggcgctgacgggttcgcagaaggcgctctcgctgccga 26401 Query: 140 cggggctgggaatcgtgtgcgccagccccaaggcgctggaggcggccaagacggccaagt 199 |||| ||||| ||||||||||| ||||||||||||||||||||| |||||||||||||| Sbjct: 26400 cgggtctgggcatcgtgtgcgcgagccccaaggcgctggaggcgagcaagacggccaagt 26341 Query: 200 cggtgcgcgtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 259 ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 26340 cggtgcgggtcttcttcgactggaaggactacctcaagttctacaagatgggcacctact 26281 Query: 260 ggccctacacgccgtccatccagctcctctacggcctacgcgccggcctcgacctcctct 319 |||||||||| || ||||||||||||||||||||||| ||| ||| |||||||||| ||| Sbjct: 26280 ggccctacaccccatccatccagctcctctacggcctccgcaccgccctcgacctcatct 26221 Query: 320 tcgaggagggcctcgacaacgtcatcaagaggcacacacgcctcggcaccgc 371 ||||||| |||||||| ||||||||||||||||||| |||||||||||||| Sbjct: 26220 tcgaggaaggcctcgagaacgtcatcaagaggcacaaccgcctcggcaccgc 26169 Score = 180 bits (91), Expect = 3e-42 Identities = 133/147 (90%) Strand = Plus / Minus Query: 376 aggctggcggtggcagcgtgggggctcaagaactgcaccgagaaggaggagaacttcagc 435 |||||||| |||| ||||||||||||||||||||||| ||||||||||| |||||| Sbjct: 26071 aggctggccgtggaggcgtgggggctcaagaactgcacgcagaaggaggagtggttcagc 26012 Query: 436 gacacggtcaccgccgtcgtcgtgccgccatacatcgacagcagcgagatcgtcaagcac 495 ||||| ||||||||||||||||||||||| |||||||||||| ||||||||| |||||| Sbjct: 26011 gacaccgtcaccgccgtcgtcgtgccgccgtacatcgacagcgccgagatcgtgaagcac 25952 Query: 496 gcatggaagcggtacaacctcagcctc 522 || |||||||||||||||||||||||| Sbjct: 25951 gcctggaagcggtacaacctcagcctc 25925
>gb|DQ177463.1| Spirodela polyrrhiza serine-glyoxylate aminotransferase mRNA, complete cds Length = 1378 Score = 283 bits (143), Expect = 3e-73 Identities = 332/395 (84%) Strand = Plus / Plus Query: 32 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 91 |||||||||| ||||| |||||||| || ||||| || |||||||| ||||||||||||| Sbjct: 547 tgctgctggttgacggagtgtcgtcaatatgcgcgctcgacttccgtatggacgagtggg 606 Query: 92 gcgtggacgtggcgctgacggggtcgcagaaggcgctgtcgctgccgacggggctgggaa 151 | ||||||||||| |||||||| || |||||||| || |||||||| || ||| |||| | Sbjct: 607 gggtggacgtggcactgacgggatctcagaaggccctctcgctgcccactgggatgggca 666 Query: 152 tcgtgtgcgccagccccaaggcgctggaggcggccaagacggccaagtcggtgcgcgtct 211 |||| |||||||||||||||||||||||||| ||||||| || |||||||| | || | Sbjct: 667 tcgtctgcgccagccccaaggcgctggaggcttccaagaccgctaagtcggtaagagtgt 726 Query: 212 tcttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacacgc 271 | ||||||||||| |||||||||||||||||||||||||| || |||||||| ||||| | Sbjct: 727 ttttcgactggaacgactacctcaagttctacaagatggggacttactggccgtacaccc 786 Query: 272 cgtccatccagctcctctacggcctacgcgccggcctcgacctcctcttcgaggagggcc 331 ||||||| || || || || || || || || | || |||||| | ||||||||||||| Sbjct: 787 cgtccattcaactgctttatgggcttcgagctgctctggacctcatattcgaggagggcc 846 Query: 332 tcgacaacgtcatcaagaggcacacacgcctcggcaccgcaacaaggctggcggtggcag 391 |||| ||||| ||| |||||||| ||||| || || ||||||||||| || |||| || Sbjct: 847 tcgagaacgtgatccggaggcacagccgcctggggacggcaacaaggcttgctgtggaag 906 Query: 392 cgtgggggctcaagaactgcaccgagaaggaggag 426 | ||||| || ||||||||||| ||||||||||| Sbjct: 907 cctggggcctgaagaactgcacgcagaaggaggag 941
>gb|L34038.1|RICRMSO Oryza sativa manganese superoxide dismutase (rmsod1) mRNA, complete cds Length = 951 Score = 103 bits (52), Expect = 6e-19 Identities = 58/60 (96%) Strand = Plus / Plus Query: 237 gttctacaagatgggcacctactggccctacacgccgtccatccagctcctctacggcct 296 ||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| Sbjct: 4 gttctacaagatgggcacctactggccctacaccccatccatccagctcctctacggcct 63
>ref|NM_179620.1| Arabidopsis thaliana AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE) AT2G13360 (AGT) transcript variant AT2G13360.2 mRNA, complete cds Length = 1470 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 32 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 91 ||||||| |||||||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct: 603 tgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggatgagtggg 662 Query: 92 gcgtggacgtggcgctgacggggtcgcagaa 122 | ||||||||||| |||| ||||| ||||| Sbjct: 663 gagtggacgtggccttgactgggtctcagaa 693
>ref|NM_126925.2| Arabidopsis thaliana AGT (ALANINE:GLYOXYLATE AMINOTRANSFERASE) AT2G13360 (AGT) transcript variant AT2G13360.1 mRNA, complete cds Length = 1492 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 32 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 91 ||||||| |||||||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct: 625 tgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggatgagtggg 684 Query: 92 gcgtggacgtggcgctgacggggtcgcagaa 122 | ||||||||||| |||| ||||| ||||| Sbjct: 685 gagtggacgtggccttgactgggtctcagaa 715
>gb|AY142550.1| Arabidopsis thaliana clone RAFL08-11-L01 (R11180) mRNA sequence Length = 2348 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 32 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 91 ||||||| |||||||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct: 1540 tgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggatgagtggg 1599 Query: 92 gcgtggacgtggcgctgacggggtcgcagaa 122 | ||||||||||| |||| ||||| ||||| Sbjct: 1600 gagtggacgtggccttgactgggtctcagaa 1630
>gb|AY114010.1| Arabidopsis thaliana putative alanine-glyoxylate aminotransferase (At2g13360) mRNA, complete cds Length = 1237 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 32 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 91 ||||||| |||||||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct: 512 tgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggatgagtggg 571 Query: 92 gcgtggacgtggcgctgacggggtcgcagaa 122 | ||||||||||| |||| ||||| ||||| Sbjct: 572 gagtggacgtggccttgactgggtctcagaa 602
>gb|AY096498.1| Arabidopsis thaliana putative alanine-glyoxylate aminotransferase (At2g13360) mRNA, complete cds Length = 1450 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 32 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 91 ||||||| |||||||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct: 580 tgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggatgagtggg 639 Query: 92 gcgtggacgtggcgctgacggggtcgcagaa 122 | ||||||||||| |||| ||||| ||||| Sbjct: 640 gagtggacgtggccttgactgggtctcagaa 670
>gb|AC007209.6| Arabidopsis thaliana chromosome 2 clone F14O4 map PR1, complete sequence Length = 55345 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 32 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 91 ||||||| |||||||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct: 47253 tgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggatgagtggg 47312 Query: 92 gcgtggacgtggcgctgacggggtcgcagaa 122 | ||||||||||| |||| ||||| ||||| Sbjct: 47313 gagtggacgtggccttgactgggtctcagaa 47343
>gb|AY089195.1| Arabidopsis thaliana clone 8306 mRNA, complete sequence Length = 1449 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 32 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 91 ||||||| |||||||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct: 582 tgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggatgagtggg 641 Query: 92 gcgtggacgtggcgctgacggggtcgcagaa 122 | ||||||||||| |||| ||||| ||||| Sbjct: 642 gagtggacgtggccttgactgggtctcagaa 672
>gb|AF063901.1|AF063901 Arabidopsis thaliana alanine:glyoxylate aminotransferase (AGT) mRNA, complete cds Length = 1452 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 32 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 91 ||||||| |||||||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct: 582 tgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggatgagtggg 641 Query: 92 gcgtggacgtggcgctgacggggtcgcagaa 122 | ||||||||||| |||| ||||| ||||| Sbjct: 642 gagtggacgtggccttgactgggtctcagaa 672
>dbj|AB048945.1| Arabidopsis thaliana mRNA for serine glyoxylate aminotransferase, complete cds Length = 1424 Score = 77.8 bits (39), Expect = 3e-11 Identities = 78/91 (85%) Strand = Plus / Plus Query: 32 tgctgctggtggacggggtgtcgtccatctgcgcactggacttccgcatggacgagtggg 91 ||||||| |||||||| || |||||||||||||| || || ||||| ||||| ||||||| Sbjct: 571 tgctgctagtggacggtgtttcgtccatctgcgcgcttgatttccgaatggatgagtggg 630 Query: 92 gcgtggacgtggcgctgacggggtcgcagaa 122 | ||||||||||| |||| ||||| ||||| Sbjct: 631 gagtggacgtggccttgactgggtctcagaa 661
>gb|AF039000.1|AF039000 Fritillaria agrestis putative serine-glyoxylate aminotransferase (SGA) mRNA, complete cds Length = 1487 Score = 69.9 bits (35), Expect = 8e-09 Identities = 62/71 (87%) Strand = Plus / Plus Query: 211 ttcttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacacg 270 |||||||||||||| |||||||| ||||| ||||| || || || |||||||||||||| Sbjct: 809 ttcttcgactggaatgactacctaaagttttacaaaattggtacttactggccctacaca 868 Query: 271 ccgtccatcca 281 || |||||||| Sbjct: 869 ccttccatcca 879
>gb|AC141111.25| Medicago truncatula clone mth2-20c17, complete sequence Length = 113836 Score = 58.0 bits (29), Expect = 3e-05 Identities = 56/65 (86%) Strand = Plus / Minus Query: 226 gactacctcaagttctacaagatgggcacctactggccctacacgccgtccatccagctc 285 |||||||| ||||||||||||||||| || || ||||| ||||| || ||||| ||||| Sbjct: 63345 gactacctgaagttctacaagatgggaacttattggccatacactccttccattcagctt 63286 Query: 286 ctcta 290 ||||| Sbjct: 63285 ctcta 63281
>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29 Length = 300800 Score = 58.0 bits (29), Expect = 3e-05 Identities = 29/29 (100%) Strand = Plus / Minus Query: 170 aggcgctggaggcggccaagacggccaag 198 ||||||||||||||||||||||||||||| Sbjct: 263943 aggcgctggaggcggccaagacggccaag 263915
>gb|AY354209.1| Cucumis melo Hemed aminotransferase 2 mRNA, complete cds Length = 1436 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 211 ttcttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacacg 270 ||||| |||||||||||||| ||||||||||| || | || || |||||||| ||||| Sbjct: 897 ttctttgactggaaggactatctcaagttctataacttaggaacatactggccttacact 956 Query: 271 ccgtccatcca 281 || |||||||| Sbjct: 957 ccttccatcca 967
>gb|AY354207.1| Cucumis melo Ananas Yokneam aminotransferase 2 mRNA, complete cds Length = 1230 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 211 ttcttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacacg 270 ||||| |||||||||||||| ||||||||||| || | || || |||||||| ||||| Sbjct: 691 ttctttgactggaaggactatctcaagttctataacttaggaacatactggccttacact 750 Query: 271 ccgtccatcca 281 || |||||||| Sbjct: 751 ccttccatcca 761
>gb|AF461048.1| Cucumis melo aminotransferase 2 mRNA, complete cds Length = 1543 Score = 54.0 bits (27), Expect = 5e-04 Identities = 60/71 (84%) Strand = Plus / Plus Query: 211 ttcttcgactggaaggactacctcaagttctacaagatgggcacctactggccctacacg 270 ||||| |||||||||||||| ||||||||||| || | || || |||||||| ||||| Sbjct: 820 ttctttgactggaaggactatctcaagttctataacttaggaacatactggccttacact 879 Query: 271 ccgtccatcca 281 || |||||||| Sbjct: 880 ccttccatcca 890
>emb|CR931997.1| Corynebacterium jeikeium K411 complete genome Length = 2462499 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Plus Query: 23 acccggcgctgctgctggtggacg 46 |||||||||||||||||||||||| Sbjct: 1365314 acccggcgctgctgctggtggacg 1365337
>gb|CP000316.1| Polaromonas sp. JS666, complete genome Length = 5200264 Score = 48.1 bits (24), Expect = 0.029 Identities = 24/24 (100%) Strand = Plus / Minus Query: 22 cacccggcgctgctgctggtggac 45 |||||||||||||||||||||||| Sbjct: 2894509 cacccggcgctgctgctggtggac 2894486
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome Length = 7074893 Score = 48.1 bits (24), Expect = 0.029 Identities = 27/28 (96%) Strand = Plus / Minus Query: 19 cggcacccggcgctgctgctggtggacg 46 |||||||||||| ||||||||||||||| Sbjct: 5280781 cggcacccggcggtgctgctggtggacg 5280754
>gb|CP000110.1| Synechococcus sp. CC9605, complete genome Length = 2510659 Score = 44.1 bits (22), Expect = 0.45 Identities = 25/26 (96%) Strand = Plus / Plus Query: 158 gcgccagccccaaggcgctggaggcg 183 ||||||| |||||||||||||||||| Sbjct: 174480 gcgccaggcccaaggcgctggaggcg 174505
>gb|CP000240.1| Synechococcus sp. JA-2-3B'a(2-13), complete genome Length = 3046682 Score = 44.1 bits (22), Expect = 0.45 Identities = 22/22 (100%) Strand = Plus / Minus Query: 462 gccatacatcgacagcagcgag 483 |||||||||||||||||||||| Sbjct: 1677311 gccatacatcgacagcagcgag 1677290
>dbj|AP006840.1| Symbiobacterium thermophilum IAM 14863 DNA, complete genome Length = 3566135 Score = 44.1 bits (22), Expect = 0.45 Identities = 43/50 (86%) Strand = Plus / Plus Query: 79 atggacgagtggggcgtggacgtggcgctgacggggtcgcagaaggcgct 128 |||||||||||||| ||||||||| ||| || || ||||||||||||| Sbjct: 9863 atggacgagtgggggttggacgtggtgctcaccggcgcgcagaaggcgct 9912 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 82 gacgagtggggcgtggacgtggcg 105 ||||||||||||||||||| |||| Sbjct: 3385942 gacgagtggggcgtggacgcggcg 3385919
>ref|XM_481004.1| Oryza sativa (japonica cultivar-group), mRNA Length = 492 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 307 ctcgacctcctcttcgaggag 327 ||||||||||||||||||||| Sbjct: 262 ctcgacctcctcttcgaggag 282
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 caccgccgtcgtcgtgccgcc 464 ||||||||||||||||||||| Sbjct: 19963313 caccgccgtcgtcgtgccgcc 19963293
>ref|XM_505045.1| Yarrowia lipolytica CLIB122, YALI0F05720g predicted mRNA Length = 366 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 gagaaggaggagaacttcagc 435 ||||||||||||||||||||| Sbjct: 227 gagaaggaggagaacttcagc 207
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence Length = 2726152 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Plus Query: 82 gacgagtggggcgtggacgtg 102 ||||||||||||||||||||| Sbjct: 1880208 gacgagtggggcgtggacgtg 1880228
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 42.1 bits (21), Expect = 1.8 Identities = 27/29 (93%) Strand = Plus / Plus Query: 73 ttccgcatggacgagtggggcgtggacgt 101 |||| ||||||||| |||||||||||||| Sbjct: 3524899 ttccacatggacgattggggcgtggacgt 3524927
>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome Length = 5331656 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Minus Query: 469 atcgacagcagcgagatcgtcaagc 493 |||||| |||||||||||||||||| Sbjct: 80911 atcgacggcagcgagatcgtcaagc 80887
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 caccgccgtcgtcgtgccgcc 464 ||||||||||||||||||||| Sbjct: 19956341 caccgccgtcgtcgtgccgcc 19956321
>gb|AC090714.9| Oryza sativa chromosome 3 BAC OSJNBb0031G04 genomic sequence, complete sequence Length = 137297 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 444 caccgccgtcgtcgtgccgcc 464 ||||||||||||||||||||| Sbjct: 115602 caccgccgtcgtcgtgccgcc 115582
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 27 ggcgctgctgctggtggacgg 47 ||||||||||||||||||||| Sbjct: 3004141 ggcgctgctgctggtggacgg 3004121 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 28 gcgctgctgctggtggacggggtg 51 |||||| ||||||||||||||||| Sbjct: 4608022 gcgctggtgctggtggacggggtg 4608045
>dbj|AB117720.1| Rhodococcus rhodochrous orf21, bphC2, orf22, orf23 genes for hypothetical proteins and 2, 3-dihydroxybiphenyl 1, 2-dioxygenase, partial and complete cds Length = 3272 Score = 42.1 bits (21), Expect = 1.8 Identities = 24/25 (96%) Strand = Plus / Plus Query: 63 cgcactggacttccgcatggacgag 87 ||||||| ||||||||||||||||| Sbjct: 281 cgcactgcacttccgcatggacgag 305
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 307 ctcgacctcctcttcgaggag 327 ||||||||||||||||||||| Sbjct: 110543 ctcgacctcctcttcgaggag 110523
>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica Length = 4003362 Score = 42.1 bits (21), Expect = 1.8 Identities = 21/21 (100%) Strand = Plus / Minus Query: 415 gagaaggaggagaacttcagc 435 ||||||||||||||||||||| Sbjct: 850907 gagaaggaggagaacttcagc 850887
>ref|XM_520283.1| PREDICTED: Pan troglodytes similar to RIKEN cDNA C230093N12 (LOC464760), mRNA Length = 3300 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ggcgctgctgctggtggacg 46 |||||||||||||||||||| Sbjct: 2946 ggcgctgctgctggtggacg 2927
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 103 gcgctgacggggtcgcagaaggcg 126 ||||||||||| |||||||||||| Sbjct: 3525940 gcgctgacgggctcgcagaaggcg 3525917
>gb|AE016822.1| Leifsonia xyli subsp. xyli str. CTCB07, complete genome Length = 2584158 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 443 tcaccgccgtcgtcgtgccg 462 |||||||||||||||||||| Sbjct: 2380738 tcaccgccgtcgtcgtgccg 2380719
>gb|AE017283.1| Propionibacterium acnes KPA171202, complete genome Length = 2560265 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 262 ccctacacgccgtccatcca 281 |||||||||||||||||||| Sbjct: 1175113 ccctacacgccgtccatcca 1175094
>gb|BT025466.1| Bos taurus family with sequence similarity 102, member A (FAM102A), mRNA, incomplete 5' and 3' cds Length = 515 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ggcgctgctgctggtggacg 46 |||||||||||||||||||| Sbjct: 442 ggcgctgctgctggtggacg 423
>ref|XM_867838.1| PREDICTED: Bos taurus similar to early estrogen-induced gene 1 protein (LOC615907), mRNA Length = 1144 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ggcgctgctgctggtggacg 46 |||||||||||||||||||| Sbjct: 832 ggcgctgctgctggtggacg 813
>ref|XM_866456.1| PREDICTED: Bos taurus similar to Carbonic anhydrase IX precursor (Carbonate dehydratase IX) (CA-IX) (CAIX) (Membrane antigen MN) (P54/58N) (Renal cell carcinoma-associated antigen G250) (RCC-associated antigen G250) (pMW1), transcript variant 3 (LOC511923), mRNA Length = 1577 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 aggcggccaagacggccaag 198 |||||||||||||||||||| Sbjct: 882 aggcggccaagacggccaag 863
>ref|XM_878480.1| PREDICTED: Bos taurus similar to Carbonic anhydrase IX precursor (Carbonate dehydratase IX) (CA-IX) (CAIX) (Membrane antigen MN) (P54/58N) (Renal cell carcinoma-associated antigen G250) (RCC-associated antigen G250) (pMW1), transcript variant 8 (LOC511923), mRNA Length = 1057 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 aggcggccaagacggccaag 198 |||||||||||||||||||| Sbjct: 882 aggcggccaagacggccaag 863
>ref|XM_878368.1| PREDICTED: Bos taurus similar to Carbonic anhydrase IX precursor (Carbonate dehydratase IX) (CA-IX) (CAIX) (Membrane antigen MN) (P54/58N) (Renal cell carcinoma-associated antigen G250) (RCC-associated antigen G250) (pMW1), transcript variant 6 (LOC511923), mRNA Length = 1307 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 aggcggccaagacggccaag 198 |||||||||||||||||||| Sbjct: 882 aggcggccaagacggccaag 863
>ref|XM_878331.1| PREDICTED: Bos taurus similar to Carbonic anhydrase IX precursor (Carbonate dehydratase IX) (CA-IX) (CAIX) (Membrane antigen MN) (P54/58N) (Renal cell carcinoma-associated antigen G250) (RCC-associated antigen G250) (pMW1), transcript variant 5 (LOC511923), mRNA Length = 1682 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 179 aggcggccaagacggccaag 198 |||||||||||||||||||| Sbjct: 882 aggcggccaagacggccaag 863
>ref|NM_203305.2| Homo sapiens family with sequence similarity 102, member A (FAM102A), transcript variant 2, mRNA Length = 3643 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ggcgctgctgctggtggacg 46 |||||||||||||||||||| Sbjct: 679 ggcgctgctgctggtggacg 660
>ref|NM_001035254.1| Homo sapiens family with sequence similarity 102, member A (FAM102A), transcript variant 1, mRNA Length = 3844 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ggcgctgctgctggtggacg 46 |||||||||||||||||||| Sbjct: 880 ggcgctgctgctggtggacg 861
>emb|AL157935.28| Human DNA sequence from clone RP11-203J24 on chromosome 9 Contains the 5' end of the ENG gene for endoglin (Osler-Rendu-Weber syndrome 1) (END, ORW, HHT1, ORW1, CD105), the AK1 gene for adenylate kinase 1, the ST6GALNAC6 gene for CMP-NeuAC:(beta)-N-acetylgalactosaminide (alpha)2,6-sialyltransferase member VI (ST6GALNACVI), the SIAT7D gene for sialyltransferase 7D ((alpha-N-acetylneuraminyl-2,3-beta-galactosyl-1, 3)-N-acetyl galactosaminide alpha-2,6-sialyltransferase) (SIAT3C, ST6GALNAC4, ST6GALNACIV), the DPM2 gene for dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit (MGC21559), the gene for a novel protien containing FLJ00179, a novel gene and ten CpG islands, complete sequence Length = 164201 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 ggcgctgctgctggtggacg 46 |||||||||||||||||||| Sbjct: 118816 ggcgctgctgctggtggacg 118835
>emb|BX640437.1| Bordetella bronchiseptica strain RB50, complete genome; segment 1/16 Length = 347356 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 acccggcgctgctgctggtggacg 46 ||||||||||||||||| |||||| Sbjct: 289554 acccggcgctgctgctgatggacg 289577
>emb|BX640423.1| Bordetella parapertussis strain 12822, complete genome; segment 1/14 Length = 348251 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 23 acccggcgctgctgctggtggacg 46 ||||||||||||||||| |||||| Sbjct: 293971 acccggcgctgctgctgatggacg 293994
>emb|BX640413.1| Bordetella pertussis strain Tohama I, complete genome; segment 3/12 Length = 349028 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 23 acccggcgctgctgctggtggacg 46 ||||||||||||||||| |||||| Sbjct: 109026 acccggcgctgctgctgatggacg 109003
>emb|AL663020.4|OSJN00220 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0049H08, complete sequence Length = 186642 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 gtcaccgccgtcgtcgtgccgcca 465 |||||||||||||||||| ||||| Sbjct: 116906 gtcaccgccgtcgtcgtgtcgcca 116929
>emb|AL606606.3|OSJN00046 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0005B05, complete sequence Length = 149134 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ccgccgtcgtcgtgccgcca 465 |||||||||||||||||||| Sbjct: 6481 ccgccgtcgtcgtgccgcca 6500
>emb|AL591985.1|RME591985 Sinorhizobium meliloti 1021 complete pSymB Length = 1683333 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 468 catcgacagcagcgagatcgtcaa 491 |||||||||| ||||||||||||| Sbjct: 418751 catcgacagcggcgagatcgtcaa 418774
>dbj|AP008229.1| Xanthomonas oryzae pv. oryzae MAFF 311018 DNA, complete genome Length = 4940217 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 cagcgacacggtcaccgccg 451 |||||||||||||||||||| Sbjct: 4339444 cagcgacacggtcaccgccg 4339463
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 gtcaccgccgtcgtcgtgccgcca 465 |||||||||||||||||| ||||| Sbjct: 17744530 gtcaccgccgtcgtcgtgtcgcca 17744553 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 446 ccgccgtcgtcgtgccgcca 465 |||||||||||||||||||| Sbjct: 6843610 ccgccgtcgtcgtgccgcca 6843629
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 gtcaccgccgtcgtcgtgccgcca 465 |||||||||||||||||| ||||| Sbjct: 13542474 gtcaccgccgtcgtcgtgtcgcca 13542497
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete sequence Length = 30731886 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 cacggtcaccgccgtcgtcg 457 |||||||||||||||||||| Sbjct: 25401973 cacggtcaccgccgtcgtcg 25401954
>gb|AC027661.1| Oryza sativa (japonica cultivar-group) BAC nbxb0049A03 chromosome 10, complete sequence Length = 162101 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 gtcaccgccgtcgtcgtgccgcca 465 |||||||||||||||||| ||||| Sbjct: 11476 gtcaccgccgtcgtcgtgtcgcca 11499
>dbj|AP005386.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC clone:OSJNBa0019I19 Length = 164483 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 cacggtcaccgccgtcgtcg 457 |||||||||||||||||||| Sbjct: 75982 cacggtcaccgccgtcgtcg 75963
>dbj|AK107643.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-F04, full insert sequence Length = 2051 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 438 cacggtcaccgccgtcgtcg 457 |||||||||||||||||||| Sbjct: 28 cacggtcaccgccgtcgtcg 9
>gb|AE013598.1| Xanthomonas oryzae pv. oryzae KACC10331, complete genome Length = 4941439 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 432 cagcgacacggtcaccgccg 451 |||||||||||||||||||| Sbjct: 4346284 cagcgacacggtcaccgccg 4346303
>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome Length = 4829781 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 24 cccggcgctgctgctggtgg 43 |||||||||||||||||||| Sbjct: 151440 cccggcgctgctgctggtgg 151459
>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome Length = 2595221 Score = 40.1 bits (20), Expect = 7.1 Identities = 26/28 (92%) Strand = Plus / Minus Query: 310 gacctcctcttcgaggagggcctcgaca 337 ||||||||||| ||||||||| |||||| Sbjct: 2193189 gacctcctcttggaggagggcgtcgaca 2193162
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 7.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 442 gtcaccgccgtcgtcgtgccgcca 465 |||||||||||||||||| ||||| Sbjct: 13549816 gtcaccgccgtcgtcgtgtcgcca 13549839
>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome Length = 7215267 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 483 gatcgtcaagcacgcatgga 502 |||||||||||||||||||| Sbjct: 230803 gatcgtcaagcacgcatgga 230822
>gb|AF005899.1|AF005899 Salmonella gallinarum virulence plasmid minor fimbrial subunit genes, complete cds Length = 3252 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 447 cgccgtcgtcgtgccgccat 466 |||||||||||||||||||| Sbjct: 2002 cgccgtcgtcgtgccgccat 1983
>gb|BC047949.1| Homo sapiens family with sequence similarity 102, member A, mRNA (cDNA clone IMAGE:5763298) Length = 3398 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ggcgctgctgctggtggacg 46 |||||||||||||||||||| Sbjct: 679 ggcgctgctgctggtggacg 660
>gb|U00090.1| Rhizobium sp. NGR234 plasmid pNGR234a, complete sequence Length = 536165 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 178 gaggcggccaagacggccaa 197 |||||||||||||||||||| Sbjct: 144548 gaggcggccaagacggccaa 144529
>dbj|AK074108.1| Homo sapiens mRNA for FLJ00179 protein Length = 4319 Score = 40.1 bits (20), Expect = 7.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 27 ggcgctgctgctggtggacg 46 |||||||||||||||||||| Sbjct: 274 ggcgctgctgctggtggacg 255 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,422,557 Number of Sequences: 3902068 Number of extensions: 3422557 Number of successful extensions: 82171 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 81 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 79567 Number of HSP's gapped (non-prelim): 2603 length of query: 522 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 499 effective length of database: 17,143,297,704 effective search space: 8554505554296 effective search space used: 8554505554296 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)