Clone Information

BLAST Search Result

Clone Name	baal32k10
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloropl...	223	3e-58
2	FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloropl...	219	4e-57
3	FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chlor...	219	5e-57
4	FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chlor...	213	4e-55
5	FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloropl...	177	1e-44
6	FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3....	127	3e-29
7	FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3....	107	2e-23
8	FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2...	104	1e-22
9	FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2...	102	7e-22
10	FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2...	102	7e-22
11	FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2...	99	8e-21
12	FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2...	97	3e-20
13	FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3....	94	3e-19
14	FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3....	94	3e-19
15	FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.2...	93	4e-19
16	FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)	92	1e-18
17	FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)	92	1e-18
18	FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)	92	1e-18
19	FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.2...	92	1e-18
20	FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)	92	1e-18
21	FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)	92	1e-18
22	FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)	92	1e-18
23	FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)	91	2e-18
24	FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)	91	3e-18
25	FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.2...	90	5e-18
26	FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.2...	86	5e-17
27	FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2...	86	5e-17
28	FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.2...	85	1e-16
29	FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3....	85	2e-16
30	FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.2...	83	6e-16
31	FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.2...	82	1e-15
32	FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3....	80	3e-15
33	FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.2...	74	3e-13
34	YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4....	72	8e-13
35	YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3....	72	8e-13
36	YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3....	72	8e-13
37	FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.2...	72	1e-12
38	FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.2...	72	1e-12
39	FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.2...	67	3e-11
40	AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)	67	3e-11
41	YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)	66	8e-11
42	AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Parapleg...	64	2e-10
43	AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)	64	4e-10
44	AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes as...	64	4e-10
45	YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo...	62	8e-10
46	SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia...	62	1e-09
47	RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes as...	62	1e-09
48	FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.2...	61	2e-09
49	FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.2...	61	2e-09
50	YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)	61	2e-09
51	FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.2...	59	1e-08
52	CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha	33	0.72
53	TSG6_MOUSE (O08859) Tumor necrosis factor-inducible protein TSG-...	33	0.72
54	TSG6_RABIT (P98065) Tumor necrosis factor-inducible protein TSG-...	32	0.94
55	YEA8_SCHPO (O14073) Putative dipeptidyl aminopeptidase C2E11.08 ...	32	1.6
56	GLND_METCA (Q60BB2) [Protein-PII] uridylyltransferase (EC 2.7.7....	31	2.7
57	CK016_MOUSE (Q9JJR6) Protein C11orf16 homolog	30	3.6
58	CH601_CORDI (Q6NJ37) 60 kDa chaperonin 1 (Protein Cpn60 1) (groE...	30	4.6

>FTSH_MEDSA (Q9BAE0) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-)
          Length = 706

 Score =  223 bits (568), Expect = 3e-58
 Identities = 112/125 (89%), Positives = 119/125 (95%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           +FGQDNVTTGAS+DFMQVSRVARQMVERFGFSKKIGQVAIG  GGNPFLGQQMSSQKDYS
Sbjct: 582 VFGQDNVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAIGGGGGNPFLGQQMSSQKDYS 641

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 200
           MATADIVD EVRELV+ AY RATQIINTHIDILH+LA LLIEKETVDGEEFMSLFIDG+A
Sbjct: 642 MATADIVDKEVRELVDKAYERATQIINTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKA 701

Query: 199 ELFVA 185
           EL+V+
Sbjct: 702 ELYVS 706

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>FTSH_TOBAC (O82150) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (DS9)
          Length = 714

 Score =  219 bits (558), Expect = 4e-57
 Identities = 110/128 (85%), Positives = 120/128 (93%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFGQDNVTTGAS+DFMQVSRVARQMVER GFSKKIGQVAIG  GGNPFLGQQMS+QKDYS
Sbjct: 583 IFGQDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYS 642

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 200
           MATAD+VDAEVRELVE AY RAT+II THIDILH+LA LLIEKETVDGEEFMSLFIDG+A
Sbjct: 643 MATADVVDAEVRELVERAYERATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGKA 702

Query: 199 ELFVA*VA 176
           EL+++ V+
Sbjct: 703 ELYISWVS 710

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>FTSH1_ARATH (Q39102) Cell division protein ftsH homolog 1, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 716

 Score =  219 bits (557), Expect = 5e-57
 Identities = 108/125 (86%), Positives = 118/125 (94%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFG +NVTTGAS+DFMQVSRVARQM+ERFGFSKKIGQVA+G  GGNPF+GQQMSSQKDYS
Sbjct: 592 IFGDENVTTGASNDFMQVSRVARQMIERFGFSKKIGQVAVGGPGGNPFMGQQMSSQKDYS 651

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 200
           MATADIVDAEVRELVE AY RAT+II THIDILH+LA LLIEKETVDGEEFMSLFIDGQA
Sbjct: 652 MATADIVDAEVRELVEKAYKRATEIITTHIDILHKLAQLLIEKETVDGEEFMSLFIDGQA 711

Query: 199 ELFVA 185
           EL+++
Sbjct: 712 ELYIS 716

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>FTSH2_ARATH (Q9FH02) Cell division protein ftsH homolog 2, chloroplast|
           precursor (EC 3.4.24.-)
          Length = 704

 Score =  213 bits (541), Expect = 4e-55
 Identities = 107/125 (85%), Positives = 116/125 (92%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFG +NVTTGAS+DFMQVSRVARQMVERFGFSKKIGQVA+G +GGNPFLGQ MSSQKDYS
Sbjct: 580 IFGDENVTTGASNDFMQVSRVARQMVERFGFSKKIGQVAVGGAGGNPFLGQSMSSQKDYS 639

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 200
           MATAD+VDAEVRELVE AY RA +II T IDILH+LA LLIEKETVDGEEFMSLFIDGQA
Sbjct: 640 MATADVVDAEVRELVEKAYVRAKEIITTQIDILHKLAQLLIEKETVDGEEFMSLFIDGQA 699

Query: 199 ELFVA 185
           EL+V+
Sbjct: 700 ELYVS 704

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>FTSH_CAPAN (Q39444) Cell division protein ftsH homolog, chloroplast precursor|
           (EC 3.4.24.-) (Fragment)
          Length = 662

 Score =  177 bits (450), Expect = 1e-44
 Identities = 89/103 (86%), Positives = 95/103 (92%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFG+DNVTTGAS+DFMQVSRVARQMVER GFSKKIGQVAIG  GGNPFLGQQMS+QKDYS
Sbjct: 560 IFGEDNVTTGASNDFMQVSRVARQMVERLGFSKKIGQVAIGGGGGNPFLGQQMSTQKDYS 619

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEK 251
           MATAD+VD+EVRELVE AY RA QII THIDILH+LA LLIEK
Sbjct: 620 MATADVVDSEVRELVEKAYERAKQIITTHIDILHKLAQLLIEK 662

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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score =  127 bits (318), Expect = 3e-29
 Identities = 63/122 (51%), Positives = 87/122 (71%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFG++ VTTGAS+D  QV+RVARQMV RFG S ++G VA+G  GG  FLG+ ++S +D+S
Sbjct: 491 IFGEEEVTTGASNDLQQVARVARQMVTRFGMSDRLGPVALGRQGGGVFLGRDIASDRDFS 550

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 200
             TA  +D EV +LV+ AY RA Q++  +  IL +LA +L+EKETVD EE  +L  +  A
Sbjct: 551 DETAAAIDEEVSQLVDQAYQRAKQVLVENRGILDQLAEILVEKETVDSEELQTLLANNNA 610

Query: 199 EL 194
           +L
Sbjct: 611 KL 612

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>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score =  107 bits (268), Expect = 2e-23
 Identities = 53/114 (46%), Positives = 76/114 (66%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           +FG D VTTGA  D  QV+ +ARQMV RFG S  +G +++ SSGG  FLG  + ++ +YS
Sbjct: 498 VFGDDEVTTGAGGDLQQVTEMARQMVTRFGMSN-LGPISLESSGGEVFLGGGLMNRSEYS 556

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
              A  +DA+VR+L E  +  A +I+    +++ RL +LLIEKET+DGEEF  +
Sbjct: 557 EEVATRIDAQVRQLAEQGHQMARKIVQEQREVVDRLVDLLIEKETIDGEEFRQI 610

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>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score =  104 bits (260), Expect = 1e-22
 Identities = 54/111 (48%), Positives = 74/111 (66%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFG   VTTGAS+D  QV+ +ARQMV RFG SK IG +++ S G +PFLG+ M    +YS
Sbjct: 499 IFGDAEVTTGASNDLQQVTSMARQMVTRFGMSK-IGPLSLESQGSDPFLGRGMGGGSEYS 557

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 227
              A  +D +VRE+V   Y  A +I+  +  ++ RL +LLIEKET++G EF
Sbjct: 558 DEVATNIDKQVREIVSECYKEAKKIVKDNRVVMDRLVDLLIEKETIEGNEF 608

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>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  102 bits (254), Expect = 7e-22
 Identities = 52/110 (47%), Positives = 71/110 (64%)
 Frame = -2

Query: 538 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 359
           TTGA SD  Q +++AR MV  FG S K+G V  GS  G+PFLG+ M +Q DYS   A  +
Sbjct: 495 TTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREI 554

Query: 358 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFID 209
           D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+   E  S+F D
Sbjct: 555 DEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604

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>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score =  102 bits (254), Expect = 7e-22
 Identities = 52/110 (47%), Positives = 71/110 (64%)
 Frame = -2

Query: 538 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 359
           TTGA SD  Q +++AR MV  FG S K+G V  GS  G+PFLG+ M +Q DYS   A  +
Sbjct: 495 TTGAVSDIEQATKIARSMVTEFGMSSKLGAVKYGSEHGDPFLGRTMGTQPDYSHEVAREI 554

Query: 358 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFID 209
           D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+   E  S+F D
Sbjct: 555 DEEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELESIFAD 604

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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 99.0 bits (245), Expect = 8e-21
 Identities = 50/117 (42%), Positives = 74/117 (63%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           +FG   VTTGA +D  QV+ +ARQMV RFG S  IG +++ S   +PFLG+ M S   YS
Sbjct: 499 VFGLPEVTTGAGNDLQQVTSMARQMVTRFGMSN-IGPLSLESQNSDPFLGRTMGSSSQYS 557

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFID 209
              A  +D +VR +++  ++   QII  +  ++ +L +LLIEKET+DG+EF  +  D
Sbjct: 558 EDIASRIDMQVRAIIQHCHTETVQIIKDNRVVIDKLVDLLIEKETIDGDEFRQIVGD 614

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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 97.1 bits (240), Expect = 3e-20
 Identities = 49/108 (45%), Positives = 69/108 (63%)
 Frame = -2

Query: 538 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 359
           TTGA SD  + +++AR MV  FG S K+G V  GS  G+PFLG+ M +Q DYS   A  +
Sbjct: 495 TTGAVSDIEKATKIARSMVTEFGMSSKLGAVRYGSEHGDPFLGRTMGTQADYSHEVARDI 554

Query: 358 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLF 215
           D EVR+L+E A++ A +I+  + D+L  LA  L+EKET+   E   +F
Sbjct: 555 DDEVRKLIEAAHTEAWEILTEYRDVLDTLAGELLEKETLHRPELEGIF 602

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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 44/114 (38%), Positives = 73/114 (64%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G++N++TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ M+  K  S
Sbjct: 478 IYGEENISTGASNDIKVATNIARNMVTQWGFSEKLGPILYTEDEGEVFLGRSMAKAKHMS 537

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
             TA  +D EVR +V   Y+RA +I+  ++DILH + + L++ ET++ E+   L
Sbjct: 538 DETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYETIEEEQIKQL 591

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>FTSH2_HAEIN (P45219) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 381

 Score = 93.6 bits (231), Expect = 3e-19
 Identities = 44/114 (38%), Positives = 73/114 (64%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G++N++TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ M+  K  S
Sbjct: 224 IYGEENISTGASNDIKVATNIARNMVTQWGFSEKLGPILYTEDEGEVFLGRSMAKAKHMS 283

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
             TA  +D EVR +V   Y+RA +I+  ++DILH + + L++ ET++ E+   L
Sbjct: 284 DETAHSIDEEVRAIVNRNYARAREILIDNMDILHAMKDALVKYETIEEEQIKQL 337

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>FTSH_ODOSI (P49825) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 644

 Score = 93.2 bits (230), Expect = 4e-19
 Identities = 51/115 (44%), Positives = 74/115 (64%), Gaps = 1/115 (0%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAI-GSSGGNPFLGQQMSSQKDY 383
           IFG+  VTTGASSD  QV+ +ARQMV RFG S  IG +A+   S G  FLG  M+S  +Y
Sbjct: 512 IFGEPEVTTGASSDLQQVTNLARQMVTRFGMSN-IGPLALEDESTGQVFLGGNMASGSEY 570

Query: 382 SMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
           +   AD +D EVR+++   Y +A +I+  +  ++  +   L++KET+DG+EF  L
Sbjct: 571 AENIADRIDDEVRKIITYCYEKAIEIVLDNRVVIDLIVEKLLDKETMDGDEFREL 625

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>FTSH_BUCAP (Q8K9G8) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 613

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 45/107 (42%), Positives = 69/107 (64%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G  NV+TGA +D    + +AR MV ++GFS K+G +      G  FLG+ ++  K  S
Sbjct: 479 IYGSQNVSTGAFNDIKVATNLARNMVTQWGFSDKLGPLLYAEEEGEVFLGRSVAKAKHMS 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 239
             TA I+D EV+ L+E  Y+RA +I+N ++DILH + + LI+ ET+D
Sbjct: 539 DETARIIDEEVKLLIEVNYNRARKILNENLDILHAMKDALIKYETID 585

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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 45/114 (39%), Positives = 73/114 (64%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G ++V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S
Sbjct: 479 IYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
             TA I+D EV+ L+E  Y+RA QI+  ++DILH + + L++ ET+D  +   L
Sbjct: 539 DETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 92.0 bits (227), Expect = 1e-18
 Identities = 45/114 (39%), Positives = 73/114 (64%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G ++V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S
Sbjct: 479 IYGVEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
             TA I+D EV+ L+E  Y+RA QI+  ++DILH + + L++ ET+D  +   L
Sbjct: 539 DETARIIDQEVKALIERNYNRARQILTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_RICCN (Q92JJ9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 52/120 (43%), Positives = 78/120 (65%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFG++ VT+GASSD    + +AR MV + G S  IG +  GSSG + + G+Q +++   S
Sbjct: 482 IFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGPIFHGSSGDDMY-GRQPNNET--S 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 200
            ATA+++DAEV+ ++   Y  A  I+  HID LH LAN LIE ET+ G++  +L + G+A
Sbjct: 539 EATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL-LSGRA 597

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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 44/114 (38%), Positives = 73/114 (64%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G ++V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S
Sbjct: 479 IYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
             TA I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D  +   L
Sbjct: 539 DETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 44/114 (38%), Positives = 73/114 (64%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G ++V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S
Sbjct: 479 IYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
             TA I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D  +   L
Sbjct: 539 DETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 91.7 bits (226), Expect = 1e-18
 Identities = 44/114 (38%), Positives = 73/114 (64%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G ++V+TGAS+D    + +AR MV ++GFS+K+G +      G  FLG+ ++  K  S
Sbjct: 479 IYGPEHVSTGASNDIKVATNLARNMVTQWGFSEKLGPLLYAEEEGEVFLGRSVAKAKHMS 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
             TA I+D EV+ L+E  Y+RA Q++  ++DILH + + L++ ET+D  +   L
Sbjct: 539 DETARIIDQEVKALIERNYNRARQLLTDNMDILHAMKDALMKYETIDAPQIDDL 592

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>FTSH_BUCBP (Q89AF2) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 610

 Score = 90.9 bits (224), Expect = 2e-18
 Identities = 46/114 (40%), Positives = 72/114 (63%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G +NV+TGA +D    + +AR MV ++GFSKK+G +      G  FLG+ ++  K  S
Sbjct: 479 IYGVNNVSTGAHNDIKVATNLARNMVTQWGFSKKLGPLLYSEEEGEIFLGRTVTKSKHMS 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
             TA I+D EV+ LVE  Y+RA +I+  ++DILH + + LI+ ET++  +   L
Sbjct: 539 DETARIIDEEVKLLVEKNYNRAKKILEENLDILHAMKDALIKYETINSRQIDDL 592

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>FTSH_BUCAI (P57462) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 611

 Score = 90.5 bits (223), Expect = 3e-18
 Identities = 46/107 (42%), Positives = 68/107 (63%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G  NV+TGA +D    + +A+ MV ++GFS+K+G +      G  FLG+ ++  K  S
Sbjct: 479 IYGAKNVSTGAYNDIKIATSLAKNMVTQWGFSEKLGPLLYAEEEGEIFLGRSVAKAKHMS 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVD 239
             TA I+D EV+ L+E  YSRA  I+N +IDILH +   LI+ ET+D
Sbjct: 539 DETARIIDEEVKLLIEINYSRARNILNENIDILHAMKEALIKYETID 585

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>FTSH_RICPR (Q9ZEA2) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 89.7 bits (221), Expect = 5e-18
 Identities = 51/120 (42%), Positives = 77/120 (64%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFG++ VT+GASSD    + +AR MV + G S  IG +  GS+  + + G+Q S++   S
Sbjct: 482 IFGRNKVTSGASSDIKGATNIARAMVTKAGLSDLIGPIFHGSNSDDMY-GRQSSNE--IS 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 200
            ATA+++DAEV+ ++   Y  A  I+  HID LH LAN LIE ET+ G++  +L + G+A
Sbjct: 539 EATAELIDAEVKRIITQGYEFAKDILTKHIDQLHTLANALIEYETLSGQQIKNL-LSGRA 597

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>FTSH_BACSU (P37476) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 637

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 45/119 (37%), Positives = 74/119 (62%), Gaps = 1/119 (0%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSS-GGNPFLGQQMSSQKDY 383
           IFG+  V+TGA +DF + + +AR+MV  FG S+K+G +  G S GG  FLG+  +++++Y
Sbjct: 488 IFGE--VSTGAHNDFQRATNIARRMVTEFGMSEKLGPLQFGQSQGGQVFLGRDFNNEQNY 545

Query: 382 SMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDG 206
           S   A  +D E++ +++  Y RA QI+  + D L  +A  L++ ET+D E+   L   G
Sbjct: 546 SDQIAYEIDQEIQRIIKECYERAKQILTENRDKLELIAQTLLKVETLDAEQIKHLIDHG 604

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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 86.3 bits (212), Expect = 5e-17
 Identities = 45/119 (37%), Positives = 77/119 (64%), Gaps = 1/119 (0%)
 Frame = -2

Query: 556 FGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVA-IGSSGGNPFLGQQMSSQKDYS 380
           FG+  V+TGA +DF + + +AR+MV  +G S+K+G +  I  SGG  FLG+ + ++++YS
Sbjct: 494 FGE--VSTGAHNDFQRATGIARKMVTEYGMSEKLGPMQFISGSGGQVFLGRDIQNEQNYS 551

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 203
            A A  +D EV+ +++  Y+R  QI+  + D L  +A  L++ ET+D E+  SL  +G+
Sbjct: 552 DAIAHEIDLEVQRIIKECYARCKQILLENKDSLDLVAKTLLDMETLDAEQIKSLVHEGK 610

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>FTSH_CYAME (Q9TJ83) Cell division protein ftsH homolog (EC 3.4.24.-) (FtsHCP)|
          Length = 603

 Score = 85.1 bits (209), Expect = 1e-16
 Identities = 43/114 (37%), Positives = 68/114 (59%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           +FG   VTTGAS+D  QV+ +ARQMV RFG S  +G + + +     FLG+ M    + S
Sbjct: 480 VFGNAEVTTGASNDLQQVTNLARQMVTRFGMSS-LGPLCLETGNEEIFLGRDMRLMPEVS 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
                 +DA+VR ++E  Y +  +++  +  ++ R+   L+EKET+DG+EF  L
Sbjct: 539 EEVIAQIDAQVRGMIEACYEKVLELMQANRVVMDRIVEELMEKETLDGKEFRQL 592

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>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 84.7 bits (208), Expect = 2e-16
 Identities = 44/114 (38%), Positives = 69/114 (60%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFG D VTTGA +D  +++ +ARQMV + G S  +G VA+   G   F G     + +YS
Sbjct: 537 IFGDDEVTTGAGNDIEKITYLARQMVTKLGMSS-LGLVALEEEGDRNFSGGDWGKRSEYS 595

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
              A  +D E++ +V  A+ RAT+II  + +++  L + LI++ET++GE F  L
Sbjct: 596 EDIAARIDREIQAIVTAAHQRATRIIEENRNLMDLLVDALIDQETIEGEHFRQL 649

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>FTSH_CYACA (O19922) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 614

 Score = 82.8 bits (203), Expect = 6e-16
 Identities = 41/114 (35%), Positives = 71/114 (62%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           +FG   VT GA++D  QV+ +ARQMV +FG SK +G + + +S    F+G+ +  + + S
Sbjct: 497 VFGLPEVTIGAANDIKQVTFMARQMVTKFGMSK-VGPICLENSSSEVFIGRDLMGRHELS 555

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
                 VD EVR +++  Y +A  I++ +  ++ R+ N L+EKET++ +EFM +
Sbjct: 556 EEMVAKVDLEVRSILKDCYIQARTILSQNRKLIDRVVNELVEKETIEAKEFMRI 609

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>FTSH_LACLA (P46469) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 695

 Score = 82.0 bits (201), Expect = 1e-15
 Identities = 44/112 (39%), Positives = 66/112 (58%)
 Frame = -2

Query: 538 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 359
           T GAS+D  + + +AR MV  +G SKK+G V+        F+G+     K YS ATA ++
Sbjct: 526 TPGASNDIEKATHIARSMVTEYGMSKKLGMVSY-EGDHQVFIGRDYGQTKTYSEATAVMI 584

Query: 358 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 203
           D EVR ++  AY RA + I TH +    +A  L++ ET+D ++ MSLF  G+
Sbjct: 585 DDEVRRILGEAYDRAKEAIETHREQHKAIAEALLKYETLDAKQIMSLFKTGK 636

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>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 80.5 bits (197), Expect = 3e-15
 Identities = 44/117 (37%), Positives = 71/117 (60%), Gaps = 1/117 (0%)
 Frame = -2

Query: 547 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSS-QKDYSMAT 371
           D++TTGA++D  + + +A QMV  +G SK +G +A      N FLGQ M + ++  S  T
Sbjct: 506 DSITTGAANDLQRATDLAEQMVTTYGMSKVLGPLAYDKGQQNNFLGQGMGNPRRMVSDDT 565

Query: 370 ADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQA 200
           A  +D EV+E+VE  +++A  I+  + D+L  +A  ++EKE ++GEE   L    QA
Sbjct: 566 AKEIDLEVKEIVEQGHNQALAILEHNRDLLEAIAEKILEKEVIEGEELHHLLGQVQA 622

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>FTSH_AQUAE (O67077) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 634

 Score = 73.9 bits (180), Expect = 3e-13
 Identities = 41/114 (35%), Positives = 66/114 (57%)
 Frame = -2

Query: 556 FGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSM 377
           FG+D +TTGA +D  + + +A +MV  +G S K+G +AI     NPFLG  M++  D S 
Sbjct: 484 FGKDGITTGAENDLQRATDLAYRMVSMWGMSDKVGPIAI-RRVANPFLG-GMTTAVDTSP 541

Query: 376 ATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLF 215
                +D EV+ ++   Y +A  I+  + + L  +   L+EKET+  EEF+ +F
Sbjct: 542 DLLREIDEEVKRIITEQYEKAKAIVEEYKEPLKAVVKKLLEKETITCEEFVEVF 595

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>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 40/119 (33%), Positives = 66/119 (55%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFG D++TTGASSDF   +++A++MV +FG S+K+G +    +G               S
Sbjct: 606 IFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLS 652

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 203
             T   ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 653 PETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710

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>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 40/119 (33%), Positives = 66/119 (55%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFG D++TTGASSDF   +++A++MV +FG S+K+G +    +G               S
Sbjct: 606 IFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLS 652

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 203
             T   ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 653 PETQSAIEQEIRILLRESYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 710

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>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 72.4 bits (176), Expect = 8e-13
 Identities = 40/119 (33%), Positives = 66/119 (55%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           IFG D++TTGASSDF   +++A++MV +FG S+K+G +    +G               S
Sbjct: 664 IFGTDHITTGASSDFDNATKIAKRMVTKFGMSEKLGVMTYSDTG-------------KLS 710

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 203
             T   ++ E+R L+  +Y RA  I+ TH      LA  L+  ET+D +E + + ++G+
Sbjct: 711 PETQSAIEQEIRILLRDSYERAKHILKTHAKEHKNLAEALLTYETLDAKE-IQIVLEGK 768

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>FTSH_STRR6 (P59652) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 43/112 (38%), Positives = 67/112 (59%)
 Frame = -2

Query: 538 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 359
           TTGAS+DF Q +++AR MV  +G S+K+G V     G +  LG Q S QK  S  TA  +
Sbjct: 519 TTGASNDFEQATQMARAMVTEYGMSEKLGPVQY--EGNHAMLGAQ-SPQKSISEQTAYEI 575

Query: 358 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 203
           D EVR L+  A ++A +II ++ +    +A  L++ ET+D  +  +L+  G+
Sbjct: 576 DEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGK 627

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>FTSH_STRPN (O69076) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 652

 Score = 72.0 bits (175), Expect = 1e-12
 Identities = 43/112 (38%), Positives = 67/112 (59%)
 Frame = -2

Query: 538 TTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADIV 359
           TTGAS+DF Q +++AR MV  +G S+K+G V     G +  LG Q S QK  S  TA  +
Sbjct: 519 TTGASNDFEQATQMARAMVTEYGMSEKLGPVQY--EGNHAMLGAQ-SPQKSISEQTAYEI 575

Query: 358 DAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQ 203
           D EVR L+  A ++A +II ++ +    +A  L++ ET+D  +  +L+  G+
Sbjct: 576 DEEVRSLLNEARNKAAEIIQSNRETHKLIAEALLKYETLDSTQIKALYETGK 627

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>FTSH_MYCPU (Q98PE4) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 725

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 34/110 (30%), Positives = 65/110 (59%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G++N++TGAS D  + +++AR+MV  +G S  +G +       NPFLG+   S+  + 
Sbjct: 539 IYGKENISTGASDDISRATKIARKMVTEWGMS-ALGPIKYEEDTENPFLGRDY-SKGTFG 596

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 230
              A  +D E+R+++  +   A + I  ++++L  + + L+E ET+  EE
Sbjct: 597 SKMAHEIDLEIRKIISASEEIAIKAIEQNLELLELIKDSLLENETIVAEE 646

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>AFG31_MOUSE (Q920A7) AFG3-like protein 1 (EC 3.4.24.-)|
          Length = 663

 Score = 67.4 bits (163), Expect = 3e-11
 Identities = 40/113 (35%), Positives = 67/113 (59%)
 Frame = -2

Query: 556 FGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSM 377
           FGQ  +TTGA  D  +V++ A   + +FG S+K+GQV+       P  G+ M  +K YS 
Sbjct: 505 FGQ--ITTGAQDDLRKVTQSAYAQIVQFGMSEKLGQVSFDF----PRQGETMV-EKPYSE 557

Query: 376 ATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
           ATA ++D EVR LV +AY+R  +++    + + ++   L+EKE ++  + + L
Sbjct: 558 ATAQLIDEEVRCLVRSAYNRTLELLTQCREQVEKVGRRLLEKEVLEKADMIEL 610

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>YME1_CAEEL (P54813) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 676

 Score = 65.9 bits (159), Expect = 8e-11
 Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 4/123 (3%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQ---- 392
           IFG D VTTGA+ D  + +++A QMV+ FG S K+G           F  Q   S     
Sbjct: 527 IFGDDKVTTGAADDLSKATQLAVQMVKVFGMSDKVGL--------RDFTAQDNESALVKV 578

Query: 391 KDYSMATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFI 212
            D +  TA+++DAE+  +++ +Y RA  I+ T       LA  L+E ET+  +E +   I
Sbjct: 579 SDLAPQTAELIDAEINRVLQESYKRAKVILETKKKEHQLLAEALLEYETLSADE-VKRVI 637

Query: 211 DGQ 203
            GQ
Sbjct: 638 SGQ 640

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>AFG32_HUMAN (Q9Y4W6) AFG3-like protein 2 (EC 3.4.24.-) (Paraplegin-like|
           protein)
          Length = 797

 Score = 64.3 bits (155), Expect = 2e-10
 Identities = 37/108 (34%), Positives = 61/108 (56%)
 Frame = -2

Query: 541 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 362
           +TTGA  D  +V++ A   + +FG ++K+GQ++       P  G  M  +K YS ATA +
Sbjct: 642 ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDL----PRQGD-MVLEKPYSEATARL 696

Query: 361 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
           +D EVR L+  AY R   ++      + ++A LL+EKE +D  + + L
Sbjct: 697 IDDEVRILINDAYKRTVALLTEKKADVEKVALLLLEKEVLDKNDMVEL 744

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>AF3G2_MOUSE (Q8JZQ2) AFG3-like protein 2 (EC 3.4.24.-)|
          Length = 802

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 37/108 (34%), Positives = 61/108 (56%)
 Frame = -2

Query: 541 VTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATADI 362
           +TTGA  D  +V++ A   + +FG ++K+GQ++       P  G  M  +K YS ATA +
Sbjct: 641 ITTGAQDDLRKVTQSAYAQIVQFGMNEKVGQISFDL----PRQGD-MVLEKPYSEATARM 695

Query: 361 VDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
           +D EVR L+  AY R   ++      + ++A LL+EKE +D  + + L
Sbjct: 696 IDDEVRILISDAYRRTVALLTEKKADVEKVALLLLEKEVLDKNDMVQL 743

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>AFG3_YEAST (P39925) Mitochondrial respiratory chain complexes assembly protein|
           AFG3 (EC 3.4.24.-) (TAT-binding homolog 10)
          Length = 761

 Score = 63.5 bits (153), Expect = 4e-10
 Identities = 34/109 (31%), Positives = 60/109 (55%)
 Frame = -2

Query: 544 NVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATAD 365
           +VT+GA  DF +V+++A  MV   G S KIG ++   + GN          K +S  TA 
Sbjct: 626 SVTSGAHDDFKKVTQMANAMVTSLGMSPKIGYLSFDQNDGN------FKVNKPFSNKTAR 679

Query: 364 IVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
            +D EV+ +V+ A+   T+++  ++D +  +A  L+ KE +  E+ + L
Sbjct: 680 TIDLEVKSIVDDAHRACTELLTKNLDKVDLVAKELLRKEAITREDMIRL 728

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>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 62.4 bits (150), Expect = 8e-10
 Identities = 38/110 (34%), Positives = 56/110 (50%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G+DN T+G  SD    +  AR MV ++G S  +G V +              + + +S
Sbjct: 605 IYGKDNTTSGCGSDLQSATGTARAMVTQYGMSDDVGPVNLS------------ENWESWS 652

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEE 230
               DI D EV EL++ +  RA +++      LHRLA  LIE ET+D  E
Sbjct: 653 NKIRDIADNEVIELLKDSEERARRLLTKKNVELHRLAQGLIEYETLDAHE 702

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>SPG7_HUMAN (Q9UQ90) Paraplegin (EC 3.4.24.-) (Spastic paraplegia protein 7)|
          Length = 795

 Score = 62.0 bits (149), Expect = 1e-09
 Identities = 34/110 (30%), Positives = 60/110 (54%)
 Frame = -2

Query: 547 DNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATA 368
           + VT+GA  D  +V+R+A  MV++FG +  IG ++   +      G     ++ +S    
Sbjct: 641 NEVTSGAQDDLRKVTRIAYSMVKQFGMAPGIGPISFPEAQE----GLMGIGRRPFSQGLQ 696

Query: 367 DIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
            ++D E R LV  AY    +++  ++D L  LAN L+EKE ++ E+  +L
Sbjct: 697 QMMDHEARLLVAKAYRHTEKVLQDNLDKLQALANALLEKEVINYEDIEAL 746

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>RCA1_YEAST (P40341) Mitochondrial respiratory chain complexes assembly protein|
           RCA1 (EC 3.4.24.-) (TAT-binding homolog 12)
          Length = 825

 Score = 61.6 bits (148), Expect = 1e-09
 Identities = 35/109 (32%), Positives = 59/109 (54%)
 Frame = -2

Query: 544 NVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSMATAD 365
           +VT+GAS DF +V+ +A  MV   G S KIG V       N          K +S  T D
Sbjct: 681 SVTSGASDDFKKVTSMATAMVTELGMSDKIGWV-------NYQKRDDSDLTKPFSDETGD 733

Query: 364 IVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
           I+D+EV  +V+  + R T+++    + + ++A +L++KE +  E+ + L
Sbjct: 734 IIDSEVYRIVQECHDRCTKLLKEKAEDVEKIAQVLLKKEVLTREDMIDL 782

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>FTSH_MYCGE (P47695) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 702

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 40/106 (37%), Positives = 57/106 (53%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G   +TTGASSDF + + +AR MV + G S K+GQV        P  G   S+ K YS
Sbjct: 559 IYGNLEITTGASSDFYKATNIARAMVTQLGMS-KLGQVQY-----VPSQGTLPSNVKLYS 612

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETV 242
             TA  +D E+  ++E  Y +A  II ++   L  L   L+  ET+
Sbjct: 613 EQTAKDIDNEINFIIEEQYKKAKTIIKSNRKELELLVEALLIAETI 658

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>FTSH_MYCPN (P75120) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 709

 Score = 61.2 bits (147), Expect = 2e-09
 Identities = 39/106 (36%), Positives = 58/106 (54%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           I+G   +TTGASSDF + + +AR MV + G S K+GQV    S G    G ++ S++   
Sbjct: 556 IYGPLEITTGASSDFYKATNIARAMVTQLGMS-KLGQVQYVPSQGTVPPGTKLFSEQ--- 611

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETV 242
             TA  +D E+  ++E  Y +A  II T+   L  L   L+  ET+
Sbjct: 612 --TAKDIDFEINAIIEEQYKKARTIIKTNRKELELLVEALLIAETI 655

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>YME1_SCHMA (P46508) Protein YME1 homolog (EC 3.4.24.-)|
          Length = 662

 Score = 60.8 bits (146), Expect = 2e-09
 Identities = 35/114 (30%), Positives = 60/114 (52%)
 Frame = -2

Query: 559 IFGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYS 380
           +FG D VT GA+ DF + + +A+ MV+RFGFS KIG   I             +  +   
Sbjct: 490 VFGADKVTNGAADDFRKATILAQNMVKRFGFSSKIGPRVIPD-----------TQDEQLG 538

Query: 379 MATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSL 218
            AT D++D EV +L+  + +R   ++++       LA  L+  ET+  +E +++
Sbjct: 539 EATRDLIDKEVDQLLNDSLTRVRTLLSSQSKQHKLLAEALLHFETLTKDEVLAV 592

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>FTSH_TREPA (O83746) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 609

 Score = 58.5 bits (140), Expect = 1e-08
 Identities = 32/110 (29%), Positives = 59/110 (53%)
 Frame = -2

Query: 556 FGQDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNPFLGQQMSSQKDYSM 377
           FG+  V+TGA +D  + + + R+M+  +G S+K   VA+   G       Q++  ++YS 
Sbjct: 469 FGE--VSTGAGNDISRATDIVRKMITDYGMSEKFQNVALTRRGTGYLAEPQLA--REYSE 524

Query: 376 ATADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEF 227
            T   VD EV  ++   Y     ++    ++L  +A  L+E+ET++ +EF
Sbjct: 525 CTQQYVDEEVARVLAERYRAVVALLTEKKELLEYIATRLLERETIERDEF 574

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>CTF1A_FUSSO (P52958) Cutinase transcription factor 1 alpha|
          Length = 909

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 29/116 (25%), Positives = 49/116 (42%), Gaps = 4/116 (3%)
 Frame = -2

Query: 373 TADIVDAEVRELVETAYSRATQIINTHIDILHRLANLLIEKETVDGEEFMSLFIDGQAEL 194
           +AD+V   + E V  + +R T++ N  IDILH+    L+    +          D   + 
Sbjct: 208 SADVVHYPLPENVRGSRARLTELDNVEIDILHQRGAFLLPPRAL---------CDELIDA 258

Query: 193 FVA*VAPSCPVC----FRRLYEGPACRNHIDLVKMLFLQTCLYSSL*KCTDTECVD 38
           + + V P  PV     F R Y  P      +   +L LQ+ L +    C + + +D
Sbjct: 259 YFSWVHPIVPVINRTRFMRQYRDPK-----NPPSLLLLQSVLLAGTRACNNAQLMD 309

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>TSG6_MOUSE (O08859) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein)
          Length = 275

 Score = 32.7 bits (73), Expect = 0.72
 Identities = 17/50 (34%), Positives = 23/50 (46%)
 Frame = +3

Query: 57  VHFYKELYKHVCKNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 206
           V  ++E +    KN IF  S+W  QA   Y+R    G    TYA   + C
Sbjct: 9   VLLWEEAHGWGFKNGIFHNSIWLEQAAGVYHREARAGRYKLTYAEAKAVC 58

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>TSG6_RABIT (P98065) Tumor necrosis factor-inducible protein TSG-6 precursor|
           (TNF-stimulated gene 6 protein) (Hyaluronate-binding
           protein PS4)
          Length = 276

 Score = 32.3 bits (72), Expect = 0.94
 Identities = 15/38 (39%), Positives = 19/38 (50%)
 Frame = +3

Query: 93  KNNIFTRSMWFLQAGPSYNRRKHTGHDGATYATNSSAC 206
           KN IF  S+W  QA   Y+R   +G    TYA   + C
Sbjct: 21  KNGIFHNSIWLEQAAGVYHREARSGKYKLTYAEAKAVC 58

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>YEA8_SCHPO (O14073) Putative dipeptidyl aminopeptidase C2E11.08 (EC 3.4.14.-)|
          Length = 793

 Score = 31.6 bits (70), Expect = 1.6
 Identities = 17/47 (36%), Positives = 23/47 (48%)
 Frame = -1

Query: 560 DLWPRQRDNWGIQRLHAGLTCRQTNG*KIWVQQEDRASCDWVIWWKP 420
           DL+ R+ D   +QRL    T    NG   W+ +E+  S    IWW P
Sbjct: 190 DLYVRKNDG-NVQRLTYDGTVDVFNGLTDWIYEEEVLSSPSTIWWSP 235

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>GLND_METCA (Q60BB2) [Protein-PII] uridylyltransferase (EC 2.7.7.59) (PII|
           uridylyl-transferase) (Uridylyl-removing enzyme) (UTase)
          Length = 877

 Score = 30.8 bits (68), Expect = 2.7
 Identities = 15/32 (46%), Positives = 21/32 (65%)
 Frame = +1

Query: 58  YIFTRNYTNMFAKTTFLLDQCGSYKLDPRITA 153
           +I+ RN   +FA+TT +LDQ G   LD +I A
Sbjct: 698 FIYERNRDFLFAQTTAVLDQLGLTVLDAKIIA 729

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>CK016_MOUSE (Q9JJR6) Protein C11orf16 homolog|
          Length = 402

 Score = 30.4 bits (67), Expect = 3.6
 Identities = 18/46 (39%), Positives = 22/46 (47%), Gaps = 4/46 (8%)
 Frame = +3

Query: 426 PPDDPIATCPIFLLNPNLSTICLATRET----CMKSLDAPVVTLSW 551
           PP D   TCP     P L+T C  TR T    C+ ++D P   L W
Sbjct: 31  PPWDMSFTCPFATQAPWLATHCTFTRCTACCPCLHTVDRPWPGLRW 76

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>CH601_CORDI (Q6NJ37) 60 kDa chaperonin 1 (Protein Cpn60 1) (groEL protein 1)|
          Length = 539

 Score = 30.0 bits (66), Expect = 4.6
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = -2

Query: 550 QDNVTTGASSDFMQVSRVARQMVERFGFSKKIGQVAIGSSGGNP 419
           Q+ V  G  S  +Q+S+  R+  + F    KIG +A+ ++   P
Sbjct: 406 QEGVIAGGGSALVQISKELREFAQEFEGDAKIGVIALANALAKP 449


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 71,116,766
Number of Sequences: 219361
Number of extensions: 1322031
Number of successful extensions: 3998
Number of sequences better than 10.0: 58
Number of HSP's better than 10.0 without gapping: 3873
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3971
length of database: 80,573,946
effective HSP length: 106
effective length of database: 57,321,680
effective search space used: 4585734400
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result