ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal32j21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK121724.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
2dbj|AK103967.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
3dbj|AK058925.1| Oryza sativa (japonica cultivar-group) cDNA clon... 248 2e-62
4gb|AY104394.1| Zea mays PCO081620 mRNA sequence 208 1e-50
5emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clon... 151 3e-33
6dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 151 3e-33
7gb|AY109905.1| Zea mays CL6208_1 mRNA sequence 101 2e-18
8gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 44 0.49
9dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.49
10gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome... 44 0.49
11dbj|AK120090.1| Oryza sativa (japonica cultivar-group) cDNA clon... 44 0.49
12gb|AC016898.6| Homo sapiens BAC clone RP11-68D19 from 7, complet... 42 1.9
13emb|BX928744.4| Zebrafish DNA sequence from clone CH211-189K9 in... 42 1.9
14ref|NM_200645.1| Danio rerio zgc:66124 (zgc:66124), mRNA 42 1.9
15gb|BC044529.1| Danio rerio, clone IMAGE:3818836, mRNA 42 1.9
16gb|BC057464.1| Danio rerio zgc:66124, mRNA (cDNA clone MGC:66124... 42 1.9
17gb|AC149608.4| Mus musculus BAC clone RP23-436E6 from 8, complet... 42 1.9
18ref|XM_474357.1| Oryza sativa (japonica cultivar-group), predic... 40 7.6
19ref|XM_474356.1| Oryza sativa (japonica cultivar-group), predic... 40 7.6
20gb|AC125620.5| Rattus norvegicus 4 BAC CH230-9J2 (Children's Hos... 40 7.6
21gb|AC113084.12| Mus musculus chromosome 1, clone RP23-292F19, co... 40 7.6
22emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genom... 40 7.6
23emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4,... 40 7.6
24gb|AC068075.16| Homo sapiens chromosome 8, clone RP11-756K15, co... 40 7.6
25dbj|AK106193.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
26dbj|AK060170.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.6
27emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.6
28emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.6
29dbj|AP003058.2| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 7.6 
>dbj|AK121724.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033081P13, full
           insert sequence
          Length = 589

 Score =  248 bits (125), Expect = 2e-62
 Identities = 179/197 (90%)
 Strand = Plus / Plus

                                                                       
Query: 41  ggcgatggcgactgctctcaaccgcggcctccgatccgggatccgcctcctcgccatcgg 100
           ||||| |||||| || ||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 95  ggcgacggcgacggcgctcaaccgcggcctccgctccgggatccgcctcctcgccaccgg 154

                                                                       
Query: 101 cgccgaggcctccaagccagcttcacgtggattccatgctaccggcgtgaagaggatgtc 160
           ||| |||||||||||| ||| ||| |||||||||||||| || || ||||||||||||  
Sbjct: 155 cgctgaggcctccaagacagattctcgtggattccatgccactggtgtgaagaggatggg 214

                                                                       
Query: 161 agggcacggtcatgatgagccatactacctccatgccaagcacatgtacaacttgcacag 220
           |||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 215 agggcatggccatgatgagccctactacctccatgccaagcacatgtacaacttgcacag 274

                            
Query: 221 gatgaagcatcagaagc 237
           ||||||||| |||||||
Sbjct: 275 gatgaagcaccagaagc 291
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>dbj|AK103967.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-A03, full
           insert sequence
          Length = 574

 Score =  248 bits (125), Expect = 2e-62
 Identities = 179/197 (90%)
 Strand = Plus / Plus

                                                                       
Query: 41  ggcgatggcgactgctctcaaccgcggcctccgatccgggatccgcctcctcgccatcgg 100
           ||||| |||||| || ||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 64  ggcgacggcgacggcgctcaaccgcggcctccgctccgggatccgcctcctcgccaccgg 123

                                                                       
Query: 101 cgccgaggcctccaagccagcttcacgtggattccatgctaccggcgtgaagaggatgtc 160
           ||| |||||||||||| ||| ||| |||||||||||||| || || ||||||||||||  
Sbjct: 124 cgctgaggcctccaagacagattctcgtggattccatgccactggtgtgaagaggatggg 183

                                                                       
Query: 161 agggcacggtcatgatgagccatactacctccatgccaagcacatgtacaacttgcacag 220
           |||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 184 agggcatggccatgatgagccctactacctccatgccaagcacatgtacaacttgcacag 243

                            
Query: 221 gatgaagcatcagaagc 237
           ||||||||| |||||||
Sbjct: 244 gatgaagcaccagaagc 260



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                        
Query: 507 tttctgttaataatacaagtggcttgaactttccaggctgtggag 551
           |||||||||||||||  | |||| |||||||||| ||||||||||
Sbjct: 517 tttctgttaataatatca-tggcatgaactttcctggctgtggag 560
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>dbj|AK058925.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-009-C02, full
           insert sequence
          Length = 701

 Score =  248 bits (125), Expect = 2e-62
 Identities = 179/197 (90%)
 Strand = Plus / Plus

                                                                       
Query: 41  ggcgatggcgactgctctcaaccgcggcctccgatccgggatccgcctcctcgccatcgg 100
           ||||| |||||| || ||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 106 ggcgacggcgacggcgctcaaccgcggcctccgctccgggatccgcctcctcgccaccgg 165

                                                                       
Query: 101 cgccgaggcctccaagccagcttcacgtggattccatgctaccggcgtgaagaggatgtc 160
           ||| |||||||||||| ||| ||| |||||||||||||| || || ||||||||||||  
Sbjct: 166 cgctgaggcctccaagacagattctcgtggattccatgccactggtgtgaagaggatggg 225

                                                                       
Query: 161 agggcacggtcatgatgagccatactacctccatgccaagcacatgtacaacttgcacag 220
           |||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 226 agggcatggccatgatgagccctactacctccatgccaagcacatgtacaacttgcacag 285

                            
Query: 221 gatgaagcatcagaagc 237
           ||||||||| |||||||
Sbjct: 286 gatgaagcaccagaagc 302



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Plus

                                                        
Query: 507 tttctgttaataatacaagtggcttgaactttccaggctgtggag 551
           |||||||||||||||  | |||| |||||||||| ||||||||||
Sbjct: 559 tttctgttaataatatca-tggcatgaactttcctggctgtggag 602
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>gb|AY104394.1| Zea mays PCO081620 mRNA sequence
          Length = 836

 Score =  208 bits (105), Expect = 1e-50
 Identities = 144/157 (91%)
 Strand = Plus / Plus

                                                                       
Query: 77  cgggatccgcctcctcgccatcggcgccgaggcctccaagccagcttcacgtggattcca 136
           |||| ||||||||||||||  |||||||||||| |||||||||||||| |||||||||||
Sbjct: 135 cgggctccgcctcctcgccgccggcgccgaggcgtccaagccagcttctcgtggattcca 194

                                                                       
Query: 137 tgctaccggcgtgaagaggatgtcagggcacggtcatgatgagccatactacctccatgc 196
           ||| |||||||||||||| |||  |||||| || |||||||||||||||||| |||||||
Sbjct: 195 tgccaccggcgtgaagagaatgggagggcatggccatgatgagccatactacatccatgc 254

                                                
Query: 197 caagcacatgtacaacttgcacaggatgaagcatcag 233
           |||||||||||| ||||||||||||||||||||||||
Sbjct: 255 caagcacatgtataacttgcacaggatgaagcatcag 291



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 27/27 (100%)
 Strand = Plus / Plus

                                      
Query: 525 gtggcttgaactttccaggctgtggag 551
           |||||||||||||||||||||||||||
Sbjct: 571 gtggcttgaactttccaggctgtggag 597
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>emb|AL606458.5| Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0084A10,
              complete sequence
          Length = 144811

 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                          
Query: 126    cgtggattccatgctaccggcgtgaagaggatgtcagggcacggtcatgatgagccatac 185
              |||||||||||||| || || ||||||||||||  |||||| || ||||||||||| |||
Sbjct: 125106 cgtggattccatgccactggtgtgaagaggatgggagggcatggccatgatgagccctac 125047

                                                                  
Query: 186    tacctccatgccaagcacatgtacaacttgcacaggatgaagcatcagaagc 237
              |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 125046 tacctccatgccaagcacatgtacaacttgcacaggatgaagcaccagaagc 124995



 Score =  103 bits (52), Expect = 6e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                          
Query: 41     ggcgatggcgactgctctcaaccgcggcctccgatccgggatccgcctcctcgccatcgg 100
              ||||| |||||| || ||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 126602 ggcgacggcgacggcgctcaaccgcggcctccgctccgggatccgcctcctcgccaccgg 126543

                              
Query: 101    cgccgaggcctccaag 116
              ||| ||||||||||||
Sbjct: 126542 cgctgaggcctccaag 126527



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                           
Query: 507    tttctgttaataatacaagtggcttgaactttccaggctgtggag 551
              |||||||||||||||  | |||| |||||||||| ||||||||||
Sbjct: 124738 tttctgttaataatatca-tggcatgaactttcctggctgtggag 124695
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score =  151 bits (76), Expect = 3e-33
 Identities = 103/112 (91%)
 Strand = Plus / Minus

                                                                            
Query: 126      cgtggattccatgctaccggcgtgaagaggatgtcagggcacggtcatgatgagccatac 185
                |||||||||||||| || || ||||||||||||  |||||| || ||||||||||| |||
Sbjct: 21475356 cgtggattccatgccactggtgtgaagaggatgggagggcatggccatgatgagccctac 21475297

                                                                    
Query: 186      tacctccatgccaagcacatgtacaacttgcacaggatgaagcatcagaagc 237
                |||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 21475296 tacctccatgccaagcacatgtacaacttgcacaggatgaagcaccagaagc 21475245



 Score =  103 bits (52), Expect = 6e-19
 Identities = 70/76 (92%)
 Strand = Plus / Minus

                                                                            
Query: 41       ggcgatggcgactgctctcaaccgcggcctccgatccgggatccgcctcctcgccatcgg 100
                ||||| |||||| || ||||||||||||||||| |||||||||||||||||||||| |||
Sbjct: 21476852 ggcgacggcgacggcgctcaaccgcggcctccgctccgggatccgcctcctcgccaccgg 21476793

                                
Query: 101      cgccgaggcctccaag 116
                ||| ||||||||||||
Sbjct: 21476792 cgctgaggcctccaag 21476777



 Score = 42.1 bits (21), Expect = 1.9
 Identities = 40/45 (88%), Gaps = 1/45 (2%)
 Strand = Plus / Minus

                                                             
Query: 507      tttctgttaataatacaagtggcttgaactttccaggctgtggag 551
                |||||||||||||||  | |||| |||||||||| ||||||||||
Sbjct: 21474988 tttctgttaataatatca-tggcatgaactttcctggctgtggag 21474945



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 88       tcctcgccatcggcgccgag 107
                ||||||||||||||||||||
Sbjct: 34678189 tcctcgccatcggcgccgag 34678208



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 88       tcctcgccatcggcgccgag 107
                ||||||||||||||||||||
Sbjct: 34675067 tcctcgccatcggcgccgag 34675086
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>gb|AY109905.1| Zea mays CL6208_1 mRNA sequence
          Length = 616

 Score =  101 bits (51), Expect = 2e-18
 Identities = 69/75 (92%)
 Strand = Plus / Plus

                                                                       
Query: 164 gcacggtcatgatgagccatactacctccatgccaagcacatgtacaacttgcacaggat 223
           ||||| ||||||||||||||||||| |||| |||||||||||||||||| ||||||||||
Sbjct: 182 gcacgctcatgatgagccatactacgtccacgccaagcacatgtacaacctgcacaggat 241

                          
Query: 224 gaagcatcagaagct 238
           |||||| ||| ||||
Sbjct: 242 gaagcaccagcagct 256
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 84      cgcctcctcgccatcggcgccg 105
               ||||||||||||||||||||||
Sbjct: 6132759 cgcctcctcgccatcggcgccg 6132738
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 84      cgcctcctcgccatcggcgccg 105
               ||||||||||||||||||||||
Sbjct: 6131972 cgcctcctcgccatcggcgccg 6131951
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>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090D11,
              complete sequence
          Length = 174865

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 84     cgcctcctcgccatcggcgccg 105
              ||||||||||||||||||||||
Sbjct: 126235 cgcctcctcgccatcggcgccg 126214
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>dbj|AK120090.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013021A09, full
           insert sequence
          Length = 597

 Score = 44.1 bits (22), Expect = 0.49
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                 
Query: 84  cgcctcctcgccatcggcgccg 105
           ||||||||||||||||||||||
Sbjct: 83  cgcctcctcgccatcggcgccg 104
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>gb|AC016898.6| Homo sapiens BAC clone RP11-68D19 from 7, complete sequence
          Length = 81117

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 375   ttattttgaacttagcatttt 395
             |||||||||||||||||||||
Sbjct: 25814 ttattttgaacttagcatttt 25834
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>emb|BX928744.4| Zebrafish DNA sequence from clone CH211-189K9 in linkage group 17,
             complete sequence
          Length = 75766

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 366   ttattggacttattttgaact 386
             |||||||||||||||||||||
Sbjct: 34743 ttattggacttattttgaact 34763
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>ref|NM_200645.1| Danio rerio zgc:66124 (zgc:66124), mRNA
          Length = 2944

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 366  ttattggacttattttgaact 386
            |||||||||||||||||||||
Sbjct: 2049 ttattggacttattttgaact 2069
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>gb|BC044529.1| Danio rerio, clone IMAGE:3818836, mRNA
          Length = 2842

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 366 ttattggacttattttgaact 386
           |||||||||||||||||||||
Sbjct: 858 ttattggacttattttgaact 838
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>gb|BC057464.1| Danio rerio zgc:66124, mRNA (cDNA clone MGC:66124 IMAGE:2640103),
            complete cds
          Length = 2944

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 366  ttattggacttattttgaact 386
            |||||||||||||||||||||
Sbjct: 2049 ttattggacttattttgaact 2069
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>gb|AC149608.4| Mus musculus BAC clone RP23-436E6 from 8, complete sequence
          Length = 196473

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 381    tgaacttagcattttgtgaag 401
              |||||||||||||||||||||
Sbjct: 111351 tgaacttagcattttgtgaag 111371
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>ref|XM_474357.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 552

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tcctcgccatcggcgccgag 107
           ||||||||||||||||||||
Sbjct: 56  tcctcgccatcggcgccgag 75
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>ref|XM_474356.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 300

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tcctcgccatcggcgccgag 107
           ||||||||||||||||||||
Sbjct: 56  tcctcgccatcggcgccgag 75
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>gb|AC125620.5| Rattus norvegicus 4 BAC CH230-9J2 (Children's Hospital Oakland Research
             Institute) complete sequence
          Length = 122542

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 509   tctgttaataatacaagtgg 528
             ||||||||||||||||||||
Sbjct: 96155 tctgttaataatacaagtgg 96174
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>gb|AC113084.12| Mus musculus chromosome 1, clone RP23-292F19, complete sequence
          Length = 247962

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 532    gaactttccaggctgtggag 551
              ||||||||||||||||||||
Sbjct: 159954 gaactttccaggctgtggag 159973
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>emb|BX572596.1| Rhodopseudomonas palustris CGA009 complete genome; segment 4/16
          Length = 348942

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 33     agcaccaaggcgatggcgac 52
              ||||||||||||||||||||
Sbjct: 197058 agcaccaaggcgatggcgac 197039
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>emb|AL606668.2|OSJN00083 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0064G10,
              complete sequence
          Length = 150206

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     tcctcgccatcggcgccgag 107
              ||||||||||||||||||||
Sbjct: 132310 tcctcgccatcggcgccgag 132329



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 88     tcctcgccatcggcgccgag 107
              ||||||||||||||||||||
Sbjct: 129188 tcctcgccatcggcgccgag 129207
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>gb|AC068075.16| Homo sapiens chromosome 8, clone RP11-756K15, complete sequence
          Length = 150900

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 507   tttctgttaataatacaagt 526
             ||||||||||||||||||||
Sbjct: 84676 tttctgttaataatacaagt 84695
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>dbj|AK106193.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-208-E04, full
           insert sequence
          Length = 1034

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 88  tcctcgccatcggcgccgag 107
           ||||||||||||||||||||
Sbjct: 250 tcctcgccatcggcgccgag 269
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>dbj|AK060170.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-E11, full
           insert sequence
          Length = 930

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 88  tcctcgccatcggcgccgag 107
           ||||||||||||||||||||
Sbjct: 554 tcctcgccatcggcgccgag 535
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>emb|AL732349.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0402C08, complete
             sequence
          Length = 100836

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    tcctcgccatcggcgccgag 107
             ||||||||||||||||||||
Sbjct: 76431 tcctcgccatcggcgccgag 76450



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    tcctcgccatcggcgccgag 107
             ||||||||||||||||||||
Sbjct: 73299 tcctcgccatcggcgccgag 73318
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>emb|AL732353.1| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0801D08, complete
             sequence
          Length = 103264

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    tcctcgccatcggcgccgag 107
             ||||||||||||||||||||
Sbjct: 21527 tcctcgccatcggcgccgag 21546



 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 88    tcctcgccatcggcgccgag 107
             ||||||||||||||||||||
Sbjct: 18395 tcctcgccatcggcgccgag 18414
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>dbj|AP003058.2| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-736J8, complete
             sequence
          Length = 83000

 Score = 40.1 bits (20), Expect = 7.6
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 391   attttgtgaagccaaagctg 410
             ||||||||||||||||||||
Sbjct: 73901 attttgtgaagccaaagctg 73882


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,206,829
Number of Sequences: 3902068
Number of extensions: 4206829
Number of successful extensions: 79396
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 30
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79213
Number of HSP's gapped (non-prelim): 183
length of query: 561
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 538
effective length of database: 17,143,297,704
effective search space: 9223094164752
effective search space used: 9223094164752
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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