ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal32i22 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ298132.1|HVU298132 Hordeum vulgare mRNA for polyamine oxidase (bpao2 gene) Length = 1700 Score = 1166 bits (588), Expect = 0.0 Identities = 604/608 (99%), Gaps = 1/608 (0%) Strand = Plus / Plus Query: 2 ctggccgacgggccccgggnaagcagttcttcgtctacgccagctccaggagaggctact 61 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 1094 ctggccgacgggccccggg-aagcagttcttcgtctacgccagctccaggagaggctact 1152 Query: 62 acgggatgtggcagtcgttcgagaaggagtaccccggggccaacgtgctgctggtgacgg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1153 acgggatgtggcagtcgttcgagaaggagtaccccggggccaacgtgctgctggtgacgg 1212 Query: 122 tgacggacgtggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggagg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1213 tgacggacgtggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggagg 1272 Query: 182 ccgtgggcgtgctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1273 ccgtgggcgtgctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatct 1332 Query: 242 acgtgccgcgctggtggtccaaccgattcttcaagggctcctactccaactggcccatcg 301 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1333 acgtgctgcgctggtggtccaaccgattcttcaagggctcctactccaactggcccatcg 1392 Query: 302 gcgtcaaccgctacgagtacgaccagctccgggcgccggttggcgggcgggtctacttca 361 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1393 gcgtcaaccgctacgagtacgaccagctccgggcgccggttggcgggcgggtctacttca 1452 Query: 362 ccggggagcacaccagcgagcactacaatggctatgtccacggagcttatcttgcaggta 421 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1453 ccggggagcacaccagcgagcactacaatggctatgtccacggagcttatcttgcaggta 1512 Query: 422 tacactccgcggacattctgatgaacaaggccctcaacaacgtcgactttaaagtccgtc 481 |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| Sbjct: 1513 tacactccgcggacattctgatgaacaaggcctccaacaacgtcgactttaaagtccgtc 1572 Query: 482 ccaagtatgacgacgagctgaaagctgaggctaaatgaaggaggaagttgagatgccatg 541 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1573 ccaagtatgacgacgagctgaaagctgaggctaaatgaaggaggaagttgagatgccatg 1632 Query: 542 ccagtctgctcgcatgcatcgtcatggaataaactcagacgcgtgccacagttaacgtgg 601 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1633 ccagtctgctcgcatgcatcgtcatggaataaactcagacgcgtgccacagttaacgtgg 1692 Query: 602 aagctttt 609 |||||||| Sbjct: 1693 aagctttt 1700
>emb|AJ304793.1|HVU304793 Hordeum vulgare bpao2 gene for flavin containing polyamine oxidase, exons 1-8 Length = 4217 Score = 636 bits (321), Expect = e-179 Identities = 331/333 (99%), Gaps = 1/333 (0%) Strand = Plus / Plus Query: 2 ctggccgacgggccccgggnaagcagttcttcgtctacgccagctccaggagaggctact 61 ||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||| Sbjct: 3359 ctggccgacgggccccggg-aagcagttcttcgtctacgccagctccaggagaggctact 3417 Query: 62 acgggatgtggcagtcgttcgagaaggagtaccccggggccaacgtgctgctggtgacgg 121 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3418 acgggatgtggcagtcgttcgagaaggagtaccccggggccaacgtgctgctggtgacgg 3477 Query: 122 tgacggacgtggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggagg 181 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3478 tgacggacgtggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggagg 3537 Query: 182 ccgtgggcgtgctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatct 241 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3538 ccgtgggcgtgctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatct 3597 Query: 242 acgtgccgcgctggtggtccaaccgattcttcaagggctcctactccaactggcccatcg 301 |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3598 acgtgctgcgctggtggtccaaccgattcttcaagggctcctactccaactggcccatcg 3657 Query: 302 gcgtcaaccgctacgagtacgaccagctccggg 334 ||||||||||||||||||||||||||||||||| Sbjct: 3658 gcgtcaaccgctacgagtacgaccagctccggg 3690 Score = 339 bits (171), Expect = 6e-90 Identities = 177/179 (98%) Strand = Plus / Plus Query: 333 ggcgccggttggcgggcgggtctacttcaccggggagcacaccagcgagcactacaatgg 392 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3816 ggcgccggttggcgggcgggtctacttcaccggggagcacaccagcgagcactacaatgg 3875 Query: 393 ctatgtccacggagcttatcttgcaggtatacactccgcggacattctgatgaacaaggc 452 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3876 ctatgtccacggagcttatcttgcaggtatacactccgcggacattctgatgaacaaggc 3935 Query: 453 cctcaacaacgtcgactttaaagtccgtcccaagtatgacgacgagctgaaagctgagg 511 | |||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 3936 ctccaacaacgtcgactttaaagtccgtcccaagtatgacgacgagctgaaagctgagg 3994 Score = 200 bits (101), Expect = 4e-48 Identities = 101/101 (100%) Strand = Plus / Plus Query: 509 aggctaaatgaaggaggaagttgagatgccatgccagtctgctcgcatgcatcgtcatgg 568 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 4117 aggctaaatgaaggaggaagttgagatgccatgccagtctgctcgcatgcatcgtcatgg 4176 Query: 569 aataaactcagacgcgtgccacagttaacgtggaagctttt 609 ||||||||||||||||||||||||||||||||||||||||| Sbjct: 4177 aataaactcagacgcgtgccacagttaacgtggaagctttt 4217
>emb|AJ298131.1|HVU298131 Hordeum vulgare mRNA for polyamine oxidase (bpao1 gene) Length = 1583 Score = 278 bits (140), Expect = 2e-71 Identities = 349/418 (83%), Gaps = 3/418 (0%) Strand = Plus / Plus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgggatgtggcagtcgttcgaga 85 |||||||| ||||||| ||| |||||||||||||||||| |||||||| ||| ||| Sbjct: 1064 agttcttcctctacgcgagcagcaggagaggctactacggagtgtggcaggagtttgagg 1123 Query: 86 aggagtaccccggggccaacgtgctgctggtgacggtgacggacgtggagtcgcggcgga 145 | ||||||| | |||||||| || ||||| || || || |||| |||||| |||||| Sbjct: 1124 cgcagtacccagacgccaacgttctcctggtcaccgtcaccgacgacgagtcgaggcgga 1183 Query: 146 tcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgt 205 ||||||||||| | |||||| ||||| ||||||| ||||| |||||| | | ||||| Sbjct: 1184 tcgagcagcagtcggacaaccagaccaaggcggagatcgtggaggtgctgaggagcatgt 1243 Query: 206 tccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtccaacc 265 |||||| | ||||||||||||||| || || ||| |||||| || ||||||||| || Sbjct: 1244 tccccggcgaggacgtccccgacgcgacggacatcctcgtgccacggtggtggtccgaca 1303 Query: 266 gattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagtacgacc 325 | |||| || |||| ||| ||||||||||||||||||||||||||||||||| ||||||| Sbjct: 1304 ggttctacaggggcaccttctccaactggcccatcggcgtcaaccgctacgaatacgacc 1363 Query: 326 agctccgggcgccggttggcgggcgggtctacttcaccggggagcacaccagcgagcact 385 ||||| |||| ||||| |||| |||| ||||||||||||||||||||||||||||||| Sbjct: 1364 agctcagggcaccggt---cgggagggtttacttcaccggggagcacaccagcgagcact 1420 Query: 386 acaatggctatgtccacggagcttatcttgcaggtatacactccgcggacattctgat 443 |||| || |||||||| |||||||||||| ||||||| |||| || ||||||||||| Sbjct: 1421 acaacggttatgtccatggagcttatctttcaggtattgactctgcagacattctgat 1478
>emb|AJ002204.1|ZMJ002204 Zea mays mRNA for flavin containing polyamine oxidase (PAO) Length = 1750 Score = 240 bits (121), Expect = 4e-60 Identities = 342/415 (82%), Gaps = 3/415 (0%) Strand = Plus / Plus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgggatgtggcagtcgttcgaga 85 |||||||| ||||||||||| ||||||||| |||||||| |||||||| |||||||| Sbjct: 1103 agttcttcctctacgccagcagcaggagaggttactacggagtgtggcaggagttcgaga 1162 Query: 86 aggagtaccccggggccaacgtgctgctggtgacggtgacggacgtggagtcgcggcgga 145 || ||||||| | ||||| || || ||||| || ||||| |||| ||||||| |||| | Sbjct: 1163 agcagtaccctgacgccaatgtcctcctggtcaccgtgaccgacgaggagtcgaggcgca 1222 Query: 146 tcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgt 205 ||||||||||| | ||| | ||||| ||||||| | || |||||||| || |||| Sbjct: 1223 tcgagcagcagtcggacgagcagaccaaggcggagatcatgcaggtgctgcggaagatgt 1282 Query: 206 tccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtccaacc 265 |||||| | ||||||||| ||||||||||| ||| || ||| | ||||||||| || Sbjct: 1283 tccccggcaaggacgtcccggacgccaccgacatccttgtcccgaggtggtggtccgaca 1342 Query: 266 gattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagtacgacc 325 | |||| ||||||| ||| |||||||||||| | ||||||||||||||||| ||||||| Sbjct: 1343 ggttctacaagggcaccttctccaactggccagttggcgtcaaccgctacgaatacgacc 1402 Query: 326 agctccgggcgccggttggcgggcgggtctacttcaccggggagcacaccagcgagcact 385 |||| |||| |||||||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 1403 agcttagggcaccggttgg---gagggtatacttcaccggcgagcacaccagcgagcact 1459 Query: 386 acaatggctatgtccacggagcttatcttgcaggtatacactccgcggacattct 440 |||||||||||||||| ||||| |||||| ||||||| ||||||| || ||||| Sbjct: 1460 acaatggctatgtccatggagcctatctttcaggtatcgactccgctgaaattct 1514
>gb|AY107888.1| Zea mays PCO061908 mRNA sequence Length = 1895 Score = 240 bits (121), Expect = 4e-60 Identities = 342/415 (82%), Gaps = 3/415 (0%) Strand = Plus / Plus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgggatgtggcagtcgttcgaga 85 |||||||| ||||||||||| ||||||||| |||||||| |||||||| |||||||| Sbjct: 1109 agttcttcctctacgccagcagcaggagaggttactacggagtgtggcaggagttcgaga 1168 Query: 86 aggagtaccccggggccaacgtgctgctggtgacggtgacggacgtggagtcgcggcgga 145 || ||||||| | ||||| || || ||||| || ||||| |||| ||||||| |||| | Sbjct: 1169 agcagtaccctgacgccaatgtcctcctggtcaccgtgaccgacgaggagtcgaggcgca 1228 Query: 146 tcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgt 205 ||||||||||| | ||| | ||||| ||||||| | || |||||||| || |||| Sbjct: 1229 tcgagcagcagtcggacgagcagaccaaggcggagatcatgcaggtgctgcggaagatgt 1288 Query: 206 tccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtccaacc 265 |||||| | ||||||||| ||||||||||| ||| || ||| | ||||||||| || Sbjct: 1289 tccccggcaaggacgtcccggacgccaccgacatccttgtcccgaggtggtggtccgaca 1348 Query: 266 gattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagtacgacc 325 | |||| ||||||| ||| |||||||||||| | ||||||||||||||||| ||||||| Sbjct: 1349 ggttctacaagggcaccttctccaactggccagttggcgtcaaccgctacgaatacgacc 1408 Query: 326 agctccgggcgccggttggcgggcgggtctacttcaccggggagcacaccagcgagcact 385 |||| |||| |||||||| | |||| ||||||||||| ||||||||||||||||||| Sbjct: 1409 agcttagggcaccggttgg---gagggtatacttcaccggcgagcacaccagcgagcact 1465 Query: 386 acaatggctatgtccacggagcttatcttgcaggtatacactccgcggacattct 440 |||||||||||||||| ||||| |||||| ||||||| ||||||| || ||||| Sbjct: 1466 acaatggctatgtccatggagcctatctttcaggtatcgactccgctgaaattct 1520
>ref|XM_450669.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1588 Score = 236 bits (119), Expect = 7e-59 Identities = 328/397 (82%), Gaps = 3/397 (0%) Strand = Plus / Plus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgggatgtggcagtcgttcgaga 85 |||||||| ||||||| ||| ||||||||||||||||||| | |||||| ||| |||| Sbjct: 1037 agttcttcctctacgcgagcaccaggagaggctactacggagtctggcaggagtttgaga 1096 Query: 86 aggagtaccccggggccaacgtgctgctggtgacggtgacggacgtggagtcgcggcgga 145 || | ||||| | ||||| ||||| |||||||||||||| |||| ||||||| |||||| Sbjct: 1097 agcaatacccggatgccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcgga 1156 Query: 146 tcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgt 205 ||||||||||||| |||| | ||||| ||| ||| | ||| || || | | ||||| Sbjct: 1157 tcgagcagcagccggacagccagaccaaggcagagatcatggaggttgtgaggagcatgt 1216 Query: 206 tccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtccaacc 265 |||| ||| ||||||||||||||||||||| ||| ||| ||| | |||||||| || Sbjct: 1217 tccctgacgaggacgtccccgacgccaccgacatcctcgtcccgagatggtggtcggaca 1276 Query: 266 gattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagtacgacc 325 | |||||| | ||| || ||||||||||||||||||||||| |||||||| | |||| Sbjct: 1277 ggttcttccaaggcagcttctccaactggcccatcggcgtcagtcgctacgaacatgacc 1336 Query: 326 agctccgggcgccggttggcgggcgggtctacttcaccggggagcacaccagcgagcact 385 ||||| ||||||||||||| | | ||||| |||||||| |||||||| ||||||| || Sbjct: 1337 agctcagggcgccggttgg---gagagtctatttcaccggtgagcacacgagcgagcgct 1393 Query: 386 acaatggctatgtccacggagcttatcttgcaggtat 422 |||||||||||||||| |||||||||||||||||||| Sbjct: 1394 acaatggctatgtccatggagcttatcttgcaggtat 1430
>dbj|AK069392.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023014L10, full insert sequence Length = 1587 Score = 236 bits (119), Expect = 7e-59 Identities = 328/397 (82%), Gaps = 3/397 (0%) Strand = Plus / Plus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgggatgtggcagtcgttcgaga 85 |||||||| ||||||| ||| ||||||||||||||||||| | |||||| ||| |||| Sbjct: 1036 agttcttcctctacgcgagcaccaggagaggctactacggagtctggcaggagtttgaga 1095 Query: 86 aggagtaccccggggccaacgtgctgctggtgacggtgacggacgtggagtcgcggcgga 145 || | ||||| | ||||| ||||| |||||||||||||| |||| ||||||| |||||| Sbjct: 1096 agcaatacccggatgccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcgga 1155 Query: 146 tcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgt 205 ||||||||||||| |||| | ||||| ||| ||| | ||| || || | | ||||| Sbjct: 1156 tcgagcagcagccggacagccagaccaaggcagagatcatggaggttgtgaggagcatgt 1215 Query: 206 tccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtccaacc 265 |||| ||| ||||||||||||||||||||| ||| ||| ||| | |||||||| || Sbjct: 1216 tccctgacgaggacgtccccgacgccaccgacatcctcgtcccgagatggtggtcggaca 1275 Query: 266 gattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagtacgacc 325 | |||||| | ||| || ||||||||||||||||||||||| |||||||| | |||| Sbjct: 1276 ggttcttccaaggcagcttctccaactggcccatcggcgtcagtcgctacgaacatgacc 1335 Query: 326 agctccgggcgccggttggcgggcgggtctacttcaccggggagcacaccagcgagcact 385 ||||| ||||||||||||| | | ||||| |||||||| |||||||| ||||||| || Sbjct: 1336 agctcagggcgccggttgg---gagagtctatttcaccggtgagcacacgagcgagcgct 1392 Query: 386 acaatggctatgtccacggagcttatcttgcaggtat 422 |||||||||||||||| |||||||||||||||||||| Sbjct: 1393 acaatggctatgtccatggagcttatcttgcaggtat 1429
>ref|XM_470573.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 1044 Score = 214 bits (108), Expect = 3e-52 Identities = 341/418 (81%), Gaps = 3/418 (0%) Strand = Plus / Plus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgggatgtggcagtcgttcgaga 85 |||||||| ||||||| ||| |||||||||| ||||| || || |||||| |||||||| Sbjct: 575 agttcttcctctacgcgagcaccaggagaggttactatggaatatggcaggagttcgaga 634 Query: 86 aggagtaccccggggccaacgtgctgctggtgacggtgacggacgtggagtcgcggcgga 145 | | ||||| | |||| || || || || ||||| || ||| ||||||| |||||| Sbjct: 635 aacaatacccagattccaatgttcttcttgtcacggtcaccgacaaggagtcgaggcgga 694 Query: 146 tcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgt 205 ||||||||||| | |||||| ||||| ||| ||| | ||| |||||| | ||||||| Sbjct: 695 tcgagcagcagtcggacaaccagaccaaggcagagatcatggaggtgctgaggaacatgt 754 Query: 206 tccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtccaacc 265 |||| |||| ||||||||| |||||||| || ||| ||| || | |||||||| ||| Sbjct: 755 tccctgaccaggacgtccctgacgccactgacatcctcgtcccaagatggtggtcaaaca 814 Query: 266 gattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagtacgacc 325 | |||| ||||||| ||| ||||||||||||||| ||||||||||||||||| || |||| Sbjct: 815 ggttctacaagggcaccttctccaactggcccattggcgtcaaccgctacgaatatgacc 874 Query: 326 agctccgggcgccggttggcgggcgggtctacttcaccggggagcacaccagcgagcact 385 ||||| |||| ||| || | | |||| ||||||||||| |||||||| |||||| ||| Sbjct: 875 agctcagggccccgatt---gagagggtttacttcaccggtgagcacacaagcgagtact 931 Query: 386 acaatggctatgtccacggagcttatcttgcaggtatacactccgcggacattctgat 443 |||||||||||||||| |||| ||||||||||||||| |||| ||||| |||||||| Sbjct: 932 acaatggctatgtccatggaggttatcttgcaggtattgactctgcggaaattctgat 989
>emb|AJ251568.1|ZMA251568 Zea mays PAO gene for flavin containing polyamine oxidase, exons 1-8 Length = 4096 Score = 192 bits (97), Expect = 9e-46 Identities = 282/343 (82%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 78 gttcgagaaggagtaccccggggccaacgtgctgctggtgacggtgacggacgtggagtc 137 |||||||||| ||||||| | ||||| || || ||||| || ||||| |||| |||||| Sbjct: 3561 gttcgagaagcagtaccctgacgccaatgtcctcctggtcaccgtgaccgacgaggagtc 3620 Query: 138 gcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgtgctgcg 197 | |||| |||||||||||| | ||| | ||||| ||||||| | || |||||||| Sbjct: 3621 gaggcgcatcgagcagcagtcggacgagcagaccaaggcggagatcatgcaggtgctgcg 3680 Query: 198 caacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtg 257 || |||||||||| | ||||||||| ||||||||||| ||| || ||| | ||||| Sbjct: 3681 gaagatgttccccggcaaggacgtcccggacgccaccgacatccttgtcccgaggtggtg 3740 Query: 258 gtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacga 317 |||| || | |||| ||||||| ||| |||||||||||| | ||||||||||||||||| Sbjct: 3741 gtccgacaggttctacaagggcaccttctccaactggccagttggcgtcaaccgctacga 3800 Query: 318 gtacgaccagctccgggcgccggttggcgggcgggtctacttcaccggggagcacaccag 377 ||||||||||| |||| |||||||| | |||| ||||||||||| ||||||||||| Sbjct: 3801 atacgaccagcttagggcaccggttgg---gagggtatacttcaccggcgagcacaccag 3857 Query: 378 cgagcactacaatggctatgtccacggagcttatcttgcaggt 420 |||||||||||||||||||||||| ||||| |||||| ||||| Sbjct: 3858 cgagcactacaatggctatgtccatggagcctatctttcaggt 3900 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgggatgtggcag 75 |||||||| ||||||||||| ||||||||| |||||||| |||||||| Sbjct: 3422 agttcttcctctacgccagcagcaggagaggttactacggagtgtggcag 3471
>emb|AJ251018.1|ZMA251018 Zea mays pao gene for polyamine oxidase, exons 1-8, clone pMPAO2 Length = 4344 Score = 192 bits (97), Expect = 9e-46 Identities = 282/343 (82%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 78 gttcgagaaggagtaccccggggccaacgtgctgctggtgacggtgacggacgtggagtc 137 |||||||||| ||||||| | ||||| || || ||||| || ||||| |||| |||||| Sbjct: 3808 gttcgagaagcagtaccctgacgccaatgtcctcctggtcaccgtgaccgacgaggagtc 3867 Query: 138 gcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgtgctgcg 197 | |||| |||||||||||| | ||| | ||||| ||||||| | || |||||||| Sbjct: 3868 gaggcgcatcgagcagcagtcggacgagcagaccaaggcggagatcatgcaggtgctgcg 3927 Query: 198 caacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtg 257 || |||||||||| | ||||||||| ||||||||||| ||| || ||| | ||||| Sbjct: 3928 gaagatgttccccggcaaggacgtcccggacgccaccgacatccttgtcccgagatggtg 3987 Query: 258 gtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacga 317 |||| || | |||| ||||||| ||| |||||||||||| | ||||||||||||||||| Sbjct: 3988 gtccgacaggttctacaagggcaccttctccaactggccagttggcgtcaaccgctacga 4047 Query: 318 gtacgaccagctccgggcgccggttggcgggcgggtctacttcaccggggagcacaccag 377 ||||||||||| |||| |||||||| | |||| ||||||||||| ||||||||||| Sbjct: 4048 atacgaccagcttagggcaccggttgg---gagggtatacttcaccggtgagcacaccag 4104 Query: 378 cgagcactacaatggctatgtccacggagcttatcttgcaggt 420 |||||||||||||||||||||||| ||||| |||||| ||||| Sbjct: 4105 cgagcactacaatggctatgtccatggagcctatctttcaggt 4147 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgggatgtggcag 75 |||||||| ||||||||||| ||||||||| |||||||| |||||||| Sbjct: 3651 agttcttcctctacgccagcagcaggagaggttactacggagtgtggcag 3700
>ref|XM_450667.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1473 Score = 184 bits (93), Expect = 2e-43 Identities = 206/243 (84%), Gaps = 3/243 (1%) Strand = Plus / Plus Query: 201 catgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtc 260 ||||||||| ||| ||| ||||||||||||||||| ||| ||| ||| | |||||||| Sbjct: 1179 catgttccctgacgaggatgtccccgacgccaccgacatcctcgtcccgagatggtggtc 1238 Query: 261 caaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagta 320 | || | |||||| |||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 1239 cgacaggttcttccggggcagcttctccaactggcccatcggcgtcagtcgctacgagta 1298 Query: 321 cgaccagctccgggcgccggttggcgggcgggtctacttcaccggggagcacaccagcga 380 ||||||||| ||||||||||||| | | || ||||||||||| |||||||| ||||| Sbjct: 1299 tgaccagctcagggcgccggttgg---gagagtgtacttcaccggtgagcacacgagcga 1355 Query: 381 gcactacaatggctatgtccacggagcttatcttgcaggtatacactccgcggacattct 440 || |||||||||||||||||| |||||||||||||||||||| |||| || || ||||| Sbjct: 1356 gcgctacaatggctatgtccatggagcttatcttgcaggtattgactctgcagagattct 1415 Query: 441 gat 443 ||| Sbjct: 1416 gat 1418 Score = 115 bits (58), Expect = 2e-22 Identities = 118/138 (85%) Strand = Plus / Plus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgggatgtggcagtcgttcgaga 85 |||||||| ||||||| ||| ||||||||||||||||||| | |||||| ||| |||| Sbjct: 1004 agttcttcctctacgcgagcaccaggagaggctactacggagtctggcaggagtttgaga 1063 Query: 86 aggagtaccccggggccaacgtgctgctggtgacggtgacggacgtggagtcgcggcgga 145 || | ||||| | ||||| ||||| |||||||||||||| |||| ||||||| |||||| Sbjct: 1064 agcaatacccggatgccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcgga 1123 Query: 146 tcgagcagcagcccgaca 163 ||||||||||||| |||| Sbjct: 1124 tcgagcagcagccggaca 1141
>emb|AJ251019.1|ZMA251019 Zea mays pao gene for polyamine oxidase, exons 1-8, clone pMPAO3 Length = 3384 Score = 184 bits (93), Expect = 2e-43 Identities = 281/343 (81%), Gaps = 3/343 (0%) Strand = Plus / Plus Query: 78 gttcgagaaggagtaccccggggccaacgtgctgctggtgacggtgacggacgtggagtc 137 |||||||||| ||||||| | ||||| || || ||||| || ||||| |||| |||||| Sbjct: 2849 gttcgagaagcagtaccctgacgccaatgtcctcctggtcaccgtgaccgacgaggagtc 2908 Query: 138 gcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgtgctgcg 197 | |||| |||||||||||| | ||| | ||||| ||||||| | || |||||||| Sbjct: 2909 gaggcgcatcgagcagcagtcggacgagcagaccaaggcggagatcatgcaggtgctgcg 2968 Query: 198 caacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtg 257 || |||||||||| | ||||||||| ||||||||||| ||| || ||| | ||||| Sbjct: 2969 gaagatgttccccggcaaggacgtcccagacgccaccgacatccttgtcccgaggtggtg 3028 Query: 258 gtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacga 317 |||| || | |||| ||||||| ||| ||| |||||||| | ||||||||||||||||| Sbjct: 3029 gtccgacaggttctacaagggcaccttctctaactggccagttggcgtcaaccgctacga 3088 Query: 318 gtacgaccagctccgggcgccggttggcgggcgggtctacttcaccggggagcacaccag 377 ||||||||||| |||| |||||||| | |||| ||||||||||| ||||||||||| Sbjct: 3089 atacgaccagcttagggcaccggttgg---gagggtatacttcaccggtgagcacaccag 3145 Query: 378 cgagcactacaatggctatgtccacggagcttatcttgcaggt 420 |||||||||||||||||||||||| ||||| |||||| ||||| Sbjct: 3146 cgagcactacaatggctatgtccatggagcctatctttcaggt 3188 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgggatgtggcag 75 |||||||| ||||||||||| ||||||||| |||||||| |||||||| Sbjct: 2696 agttcttcctctacgccagcagcaggagaggttactacggagtgtggcag 2745
>emb|AJ304792.1|HVU304792 Hordeum vulgare bpao1 gene for flavin containing polyamine oxidase, exons 1-9 Length = 2942 Score = 141 bits (71), Expect = 3e-30 Identities = 191/231 (82%) Strand = Plus / Plus Query: 100 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 159 |||||||| || ||||| || || || |||| |||||| ||||||||||||||||| | Sbjct: 2260 gccaacgttctcctggtcaccgtcaccgacgacgagtcgaggcggatcgagcagcagtcg 2319 Query: 160 gacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggac 219 |||||| ||||| ||||||| ||||| |||||| | | ||||||||||| | |||| Sbjct: 2320 gacaaccagaccaaggcggagatcgtggaggtgctgaggagcatgttccccggcgaggac 2379 Query: 220 gtccccgacgccaccgatatctacgtgccgcgctggtggtccaaccgattcttcaagggc 279 ||||||||||| || || ||| ||||| || ||||||||| || | |||| || |||| Sbjct: 2380 gtccccgacgcgacggacatcctagtgccacggtggtggtccgacaggttctacaggggc 2439 Query: 280 tcctactccaactggcccatcggcgtcaaccgctacgagtacgaccagctc 330 ||| ||||||||||||||||||||||||||||||||| |||||||||||| Sbjct: 2440 accttctccaactggcccatcggcgtcaaccgctacgaatacgaccagctc 2490 Score = 107 bits (54), Expect = 4e-20 Identities = 72/78 (92%) Strand = Plus / Plus Query: 345 cgggcgggtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacgg 404 |||| |||| ||||||||||||||||||||||||||||||||||| || |||||||| || Sbjct: 2634 cgggagggtttacttcaccggggagcacaccagcgagcactacaacggttatgtccatgg 2693 Query: 405 agcttatcttgcaggtat 422 |||||||||| ||||||| Sbjct: 2694 agcttatctttcaggtat 2711 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgggatgtggcag 75 |||||||| ||||||| ||| |||||||||||||||||| |||||||| Sbjct: 2102 agttcttcctctacgcgagcagcaggagaggctactacggagtgtggcag 2151
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 125 bits (63), Expect = 2e-25 Identities = 165/199 (82%) Strand = Plus / Plus Query: 132 ggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgt 191 ||||||| ||||||||||||||||| | |||||| ||||| ||| ||| | ||| || Sbjct: 4847852 ggagtcgaggcggatcgagcagcagtcggacaaccagaccaaggcagagatcatggaggt 4847911 Query: 192 gctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcg 251 |||| | ||||||||||| |||| ||||||||| |||||||| || ||| ||| || | Sbjct: 4847912 gctgaggaacatgttccctgaccaggacgtccctgacgccactgacatcctcgtcccaag 4847971 Query: 252 ctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccg 311 |||||||| ||| | |||| ||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 4847972 atggtggtcaaacaggttctacaagggcaccttctccaactggcccattggcgtcaaccg 4848031 Query: 312 ctacgagtacgaccagctc 330 |||||| || ||||||||| Sbjct: 4848032 ctacgaatatgaccagctc 4848050 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 350 gggtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagctt 409 |||| ||||||||||| |||||||| |||||| ||||||||||||||||||| |||| || Sbjct: 4848193 gggtttacttcaccggtgagcacacaagcgagtactacaatggctatgtccatggaggtt 4848252 Query: 410 atcttgcaggtataca 425 |||||||||||||||| Sbjct: 4848253 atcttgcaggtataca 4848268
>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16, complete sequence Length = 159092 Score = 125 bits (63), Expect = 2e-25 Identities = 165/199 (82%) Strand = Plus / Minus Query: 132 ggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgt 191 ||||||| ||||||||||||||||| | |||||| ||||| ||| ||| | ||| || Sbjct: 147695 ggagtcgaggcggatcgagcagcagtcggacaaccagaccaaggcagagatcatggaggt 147636 Query: 192 gctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcg 251 |||| | ||||||||||| |||| ||||||||| |||||||| || ||| ||| || | Sbjct: 147635 gctgaggaacatgttccctgaccaggacgtccctgacgccactgacatcctcgtcccaag 147576 Query: 252 ctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccg 311 |||||||| ||| | |||| ||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 147575 atggtggtcaaacaggttctacaagggcaccttctccaactggcccattggcgtcaaccg 147516 Query: 312 ctacgagtacgaccagctc 330 |||||| || ||||||||| Sbjct: 147515 ctacgaatatgaccagctc 147497 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Minus Query: 350 gggtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagctt 409 |||| ||||||||||| |||||||| |||||| ||||||||||||||||||| |||| || Sbjct: 147354 gggtttacttcaccggtgagcacacaagcgagtactacaatggctatgtccatggaggtt 147295 Query: 410 atcttgcaggtataca 425 |||||||||||||||| Sbjct: 147294 atcttgcaggtataca 147279
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 125 bits (63), Expect = 2e-25 Identities = 165/199 (82%) Strand = Plus / Plus Query: 132 ggagtcgcggcggatcgagcagcagcccgacaacgtgaccatggcggaggccgtgggcgt 191 ||||||| ||||||||||||||||| | |||||| ||||| ||| ||| | ||| || Sbjct: 4847067 ggagtcgaggcggatcgagcagcagtcggacaaccagaccaaggcagagatcatggaggt 4847126 Query: 192 gctgcgcaacatgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcg 251 |||| | ||||||||||| |||| ||||||||| |||||||| || ||| ||| || | Sbjct: 4847127 gctgaggaacatgttccctgaccaggacgtccctgacgccactgacatcctcgtcccaag 4847186 Query: 252 ctggtggtccaaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccg 311 |||||||| ||| | |||| ||||||| ||| ||||||||||||||| ||||||||||| Sbjct: 4847187 atggtggtcaaacaggttctacaagggcaccttctccaactggcccattggcgtcaaccg 4847246 Query: 312 ctacgagtacgaccagctc 330 |||||| || ||||||||| Sbjct: 4847247 ctacgaatatgaccagctc 4847265 Score = 103 bits (52), Expect = 7e-19 Identities = 70/76 (92%) Strand = Plus / Plus Query: 350 gggtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagctt 409 |||| ||||||||||| |||||||| |||||| ||||||||||||||||||| |||| || Sbjct: 4847408 gggtttacttcaccggtgagcacacaagcgagtactacaatggctatgtccatggaggtt 4847467 Query: 410 atcttgcaggtataca 425 |||||||||||||||| Sbjct: 4847468 atcttgcaggtataca 4847483
>emb|AJ234402.1|HVU234402 Hordeum vulgare partial mRNA; clone cMWG0647 Length = 252 Score = 121 bits (61), Expect = 3e-24 Identities = 85/90 (94%), Gaps = 4/90 (4%) Strand = Plus / Plus Query: 524 ggaagttgagatgccatgccagtctgctcgcatgcatcgtcat-ggaataaactcagacg 582 ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| | Sbjct: 3 ggaagttgagatgccatgccagtctgctcgcatgcatcgtcatgggaataaactcagabg 62 Query: 583 cgtgcca--ca-gttaacgtggaagctttt 609 ||||||| || |||||||||||||||||| Sbjct: 63 cgtgccaagcaggttaacgtggaagctttt 92
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 109 bits (55), Expect = 1e-20 Identities = 187/231 (80%) Strand = Plus / Minus Query: 100 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 159 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 12113606 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 12113547 Query: 160 gacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggac 219 |||| | ||||| ||| ||| | ||| || || | | ||||||||| ||| |||| Sbjct: 12113546 gacagccagaccaaggcagagatcatggaggttgtgaggagcatgttccctgacgaggac 12113487 Query: 220 gtccccgacgccaccgatatctacgtgccgcgctggtggtccaaccgattcttcaagggc 279 ||||||||||||||||| ||| ||| ||| | |||||||| || | |||||| | ||| Sbjct: 12113486 gtccccgacgccaccgacatcctcgtcccgagatggtggtcggacaggttcttccaaggc 12113427 Query: 280 tcctactccaactggcccatcggcgtcaaccgctacgagtacgaccagctc 330 || ||||||||||||||||||||||| |||||||| | ||||||||| Sbjct: 12113426 agcttctccaactggcccatcggcgtcagtcgctacgaacatgaccagctc 12113376 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 355 tacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttatctt 414 ||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 12092851 tacttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttatctt 12092792 Query: 415 gcaggtat 422 |||||||| Sbjct: 12092791 gcaggtat 12092784 Score = 101 bits (51), Expect = 3e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 352 gtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttat 411 ||||| |||||||| |||||||| ||||||| |||||||||||||||||| ||||||||| Sbjct: 12113204 gtctatttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttat 12113145 Query: 412 cttgcaggtat 422 ||||||||||| Sbjct: 12113144 cttgcaggtat 12113134 Score = 91.7 bits (46), Expect = 3e-15 Identities = 109/130 (83%) Strand = Plus / Minus Query: 201 catgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtc 260 ||||||||| ||| ||| ||||||||||||||||| ||| ||| ||| | |||||||| Sbjct: 12093111 catgttccctgacgaggatgtccccgacgccaccgacatcctcgtcccgagatggtggtc 12093052 Query: 261 caaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagta 320 | || | |||||| |||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 12093051 cgacaggttcttccggggcagcttctccaactggcccatcggcgtcagtcgctacgagta 12092992 Query: 321 cgaccagctc 330 ||||||||| Sbjct: 12092991 tgaccagctc 12092982 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 100 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 159 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 12093212 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 12093153 Query: 160 gaca 163 |||| Sbjct: 12093152 gaca 12093149 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgg 65 |||||||| ||||||| ||| ||||||||||||||||||| Sbjct: 12113757 agttcttcctctacgcgagcaccaggagaggctactacgg 12113718 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgg 65 |||||||| ||||||| ||| ||||||||||||||||||| Sbjct: 12093363 agttcttcctctacgcgagcaccaggagaggctactacgg 12093324
>dbj|AP005580.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OJ1759_F09 Length = 149501 Score = 109 bits (55), Expect = 1e-20 Identities = 187/231 (80%) Strand = Plus / Minus Query: 100 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 159 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 25065 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 25006 Query: 160 gacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggac 219 |||| | ||||| ||| ||| | ||| || || | | ||||||||| ||| |||| Sbjct: 25005 gacagccagaccaaggcagagatcatggaggttgtgaggagcatgttccctgacgaggac 24946 Query: 220 gtccccgacgccaccgatatctacgtgccgcgctggtggtccaaccgattcttcaagggc 279 ||||||||||||||||| ||| ||| ||| | |||||||| || | |||||| | ||| Sbjct: 24945 gtccccgacgccaccgacatcctcgtcccgagatggtggtcggacaggttcttccaaggc 24886 Query: 280 tcctactccaactggcccatcggcgtcaaccgctacgagtacgaccagctc 330 || ||||||||||||||||||||||| |||||||| | ||||||||| Sbjct: 24885 agcttctccaactggcccatcggcgtcagtcgctacgaacatgaccagctc 24835 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 355 tacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttatctt 414 ||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 4310 tacttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttatctt 4251 Query: 415 gcaggtat 422 |||||||| Sbjct: 4250 gcaggtat 4243 Score = 101 bits (51), Expect = 3e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 352 gtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttat 411 ||||| |||||||| |||||||| ||||||| |||||||||||||||||| ||||||||| Sbjct: 24663 gtctatttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttat 24604 Query: 412 cttgcaggtat 422 ||||||||||| Sbjct: 24603 cttgcaggtat 24593 Score = 91.7 bits (46), Expect = 3e-15 Identities = 109/130 (83%) Strand = Plus / Minus Query: 201 catgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtc 260 ||||||||| ||| ||| ||||||||||||||||| ||| ||| ||| | |||||||| Sbjct: 4570 catgttccctgacgaggatgtccccgacgccaccgacatcctcgtcccgagatggtggtc 4511 Query: 261 caaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagta 320 | || | |||||| |||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 4510 cgacaggttcttccggggcagcttctccaactggcccatcggcgtcagtcgctacgagta 4451 Query: 321 cgaccagctc 330 ||||||||| Sbjct: 4450 tgaccagctc 4441 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 100 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 159 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 4671 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 4612 Query: 160 gaca 163 |||| Sbjct: 4611 gaca 4608 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgg 65 |||||||| ||||||| ||| ||||||||||||||||||| Sbjct: 25216 agttcttcctctacgcgagcaccaggagaggctactacgg 25177 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgg 65 |||||||| ||||||| ||| ||||||||||||||||||| Sbjct: 4822 agttcttcctctacgcgagcaccaggagaggctactacgg 4783
>dbj|AP005525.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0564H06 Length = 146823 Score = 109 bits (55), Expect = 1e-20 Identities = 187/231 (80%) Strand = Plus / Minus Query: 100 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 159 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 47985 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 47926 Query: 160 gacaacgtgaccatggcggaggccgtgggcgtgctgcgcaacatgttccccgaccgggac 219 |||| | ||||| ||| ||| | ||| || || | | ||||||||| ||| |||| Sbjct: 47925 gacagccagaccaaggcagagatcatggaggttgtgaggagcatgttccctgacgaggac 47866 Query: 220 gtccccgacgccaccgatatctacgtgccgcgctggtggtccaaccgattcttcaagggc 279 ||||||||||||||||| ||| ||| ||| | |||||||| || | |||||| | ||| Sbjct: 47865 gtccccgacgccaccgacatcctcgtcccgagatggtggtcggacaggttcttccaaggc 47806 Query: 280 tcctactccaactggcccatcggcgtcaaccgctacgagtacgaccagctc 330 || ||||||||||||||||||||||| |||||||| | ||||||||| Sbjct: 47805 agcttctccaactggcccatcggcgtcagtcgctacgaacatgaccagctc 47755 Score = 103 bits (52), Expect = 7e-19 Identities = 64/68 (94%) Strand = Plus / Minus Query: 355 tacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttatctt 414 ||||||||||| |||||||| ||||||| |||||||||||||||||| |||||||||||| Sbjct: 27230 tacttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttatctt 27171 Query: 415 gcaggtat 422 |||||||| Sbjct: 27170 gcaggtat 27163 Score = 101 bits (51), Expect = 3e-18 Identities = 66/71 (92%) Strand = Plus / Minus Query: 352 gtctacttcaccggggagcacaccagcgagcactacaatggctatgtccacggagcttat 411 ||||| |||||||| |||||||| ||||||| |||||||||||||||||| ||||||||| Sbjct: 47583 gtctatttcaccggtgagcacacgagcgagcgctacaatggctatgtccatggagcttat 47524 Query: 412 cttgcaggtat 422 ||||||||||| Sbjct: 47523 cttgcaggtat 47513 Score = 91.7 bits (46), Expect = 3e-15 Identities = 109/130 (83%) Strand = Plus / Minus Query: 201 catgttccccgaccgggacgtccccgacgccaccgatatctacgtgccgcgctggtggtc 260 ||||||||| ||| ||| ||||||||||||||||| ||| ||| ||| | |||||||| Sbjct: 27490 catgttccctgacgaggatgtccccgacgccaccgacatcctcgtcccgagatggtggtc 27431 Query: 261 caaccgattcttcaagggctcctactccaactggcccatcggcgtcaaccgctacgagta 320 | || | |||||| |||| || ||||||||||||||||||||||| ||||||||||| Sbjct: 27430 cgacaggttcttccggggcagcttctccaactggcccatcggcgtcagtcgctacgagta 27371 Query: 321 cgaccagctc 330 ||||||||| Sbjct: 27370 tgaccagctc 27361 Score = 79.8 bits (40), Expect = 1e-11 Identities = 58/64 (90%) Strand = Plus / Minus Query: 100 gccaacgtgctgctggtgacggtgacggacgtggagtcgcggcggatcgagcagcagccc 159 ||||| ||||| |||||||||||||| |||| ||||||| ||||||||||||||||||| Sbjct: 27591 gccaatgtgctcctggtgacggtgaccgacgaggagtcgaggcggatcgagcagcagccg 27532 Query: 160 gaca 163 |||| Sbjct: 27531 gaca 27528 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgg 65 |||||||| ||||||| ||| ||||||||||||||||||| Sbjct: 48136 agttcttcctctacgcgagcaccaggagaggctactacgg 48097 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 26 agttcttcgtctacgccagctccaggagaggctactacgg 65 |||||||| ||||||| ||| ||||||||||||||||||| Sbjct: 27742 agttcttcctctacgcgagcaccaggagaggctactacgg 27703
>gb|AC096691.6| Oryza sativa chromosome 10 BAC OSJNBa0083M08 genomic sequence, complete sequence Length = 106110 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Minus Query: 358 ttcaccggggagcacaccagcgagcactacaatggctatgtcca 401 ||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 41503 ttcacaggcgagcacacaagcgaacactacaatggctatgtcca 41460
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 358 ttcaccggggagcacaccagcgagcactacaatggctatgtcca 401 ||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 11026733 ttcacaggcgagcacacaagcgaacactacaatggctatgtcca 11026776
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 358 ttcaccggggagcacaccagcgagcactacaatggctatgtcca 401 ||||| || |||||||| ||||| |||||||||||||||||||| Sbjct: 11033173 ttcacaggcgagcacacaagcgaacactacaatggctatgtcca 11033216
>emb|AL928639.5| Mouse DNA sequence from clone RP23-446O17 on chromosome 2, complete sequence Length = 177843 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 276 gggctcctactccaactggcc 296 ||||||||||||||||||||| Sbjct: 67356 gggctcctactccaactggcc 67336
>gb|AC113333.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1115_B06, complete sequence Length = 139139 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 cgccggttggcgggcgggtc 354 |||||||||||||||||||| Sbjct: 41751 cgccggttggcgggcgggtc 41732
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 40.1 bits (20), Expect = 8.3 Identities = 20/20 (100%) Strand = Plus / Minus Query: 335 cgccggttggcgggcgggtc 354 |||||||||||||||||||| Sbjct: 27677193 cgccggttggcgggcgggtc 27677174 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,273,911 Number of Sequences: 3902068 Number of extensions: 3273911 Number of successful extensions: 62834 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 26 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 62574 Number of HSP's gapped (non-prelim): 229 length of query: 609 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 586 effective length of database: 17,143,297,704 effective search space: 10045972454544 effective search space used: 10045972454544 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
