>NFYA5_ARATH (Q9SYH4) Nuclear transcription factor Y subunit A-5 (AtNF-YA-5)|
          Length = 308

 Score = 37.4 bits (85), Expect = 0.021
 Identities = 15/18 (83%), Positives = 18/18 (100%)
 Frame = +1

Query: 16  HAMRRARGTGGRFLNTKK 69
           HA++RARG+GGRFLNTKK
Sbjct: 221 HALKRARGSGGRFLNTKK 238

>NFYA7_ARATH (Q84JP1) Nuclear transcription factor Y subunit A-7 (AtNF-YA-7)|
          Length = 190

 Score = 36.2 bits (82), Expect = 0.046
 Identities = 17/22 (77%), Positives = 18/22 (81%), Gaps = 1/22 (4%)
 Frame = +1

Query: 16  HAMRRARGTGGRFLNTKK-DEH 78
           HA+RR RG GGRFLN KK DEH
Sbjct: 143 HAIRRPRGCGGRFLNAKKEDEH 164

>NFYA6_ARATH (Q9LVJ7) Nuclear transcription factor Y subunit A-6 (AtNF-YA-6)|
          Length = 308

 Score = 36.2 bits (82), Expect = 0.046
 Identities = 14/20 (70%), Positives = 18/20 (90%)
 Frame = +1

Query: 16  HAMRRARGTGGRFLNTKKDE 75
           HA++R RG+GGRFLNTKK +
Sbjct: 214 HALKRVRGSGGRFLNTKKHQ 233

>NFYAA_ARATH (Q8LFU0) Nuclear transcription factor Y subunit A-10 (AtNF-YA-10)|
          Length = 269

 Score = 35.8 bits (81), Expect = 0.060
 Identities = 15/17 (88%), Positives = 16/17 (94%)
 Frame = +1

Query: 16  HAMRRARGTGGRFLNTK 66
           HAMRR RG+GGRFLNTK
Sbjct: 174 HAMRRPRGSGGRFLNTK 190

>NFYA8_ARATH (Q9LNP6) Nuclear transcription factor Y subunit A-8 (AtNF-YA-8)|
          Length = 328

 Score = 35.4 bits (80), Expect = 0.078
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +1

Query: 16  HAMRRARGTGGRFLNTKK 69
           HA++R RG+GGRFLNTKK
Sbjct: 215 HALKRPRGSGGRFLNTKK 232

>NFYA3_ARATH (Q93ZH2) Nuclear transcription factor Y subunit A-3 (AtNF-YA-3)|
           (Transcriptional activator HAP2C)
          Length = 340

 Score = 35.4 bits (80), Expect = 0.078
 Identities = 14/18 (77%), Positives = 17/18 (94%)
 Frame = +1

Query: 16  HAMRRARGTGGRFLNTKK 69
           HA++R RG+GGRFLNTKK
Sbjct: 222 HALKRPRGSGGRFLNTKK 239

>NFYA2_ARATH (Q9M9X4) Nuclear transcription factor Y subunit A-2 (AtNF-YA-2)|
           (Transcriptional activator HAP2B)
          Length = 295

 Score = 34.7 bits (78), Expect = 0.13
 Identities = 14/17 (82%), Positives = 16/17 (94%)
 Frame = +1

Query: 16  HAMRRARGTGGRFLNTK 66
           HA+RR RG+GGRFLNTK
Sbjct: 183 HALRRPRGSGGRFLNTK 199

>NFYA4_ARATH (Q8VY64) Nuclear transcription factor Y subunit A-4 (AtNF-YA-4)|
          Length = 198

 Score = 34.3 bits (77), Expect = 0.17
 Identities = 14/19 (73%), Positives = 16/19 (84%)
 Frame = +1

Query: 16  HAMRRARGTGGRFLNTKKD 72
           HA+RR RG GGRFLN KK+
Sbjct: 141 HAIRRPRGCGGRFLNAKKE 159

>FRM4A_HUMAN (Q9P2Q2) FERM domain-containing protein 4A|
          Length = 1024

 Score = 32.3 bits (72), Expect = 0.66
 Identities = 29/102 (28%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
 Frame = -3

Query: 455  YQNQAKSHST-AVYKHTPSIPSLTINLTRAQPASSSPLAHIQHKRGDNRTRKPRMNCLDT 279
            YQ    SH   +   HT S    T + + +Q ++SS    + H R    TR P+M    +
Sbjct: 917  YQRSTASHKEHSRLSHTSS----TSSDSGSQYSTSSQSTFVAHSRV---TRMPQMCKATS 969

Query: 278  AAGPES--------------PTSPHAVATWHDGRRPGGAAVL 195
            AA P+S              P+SPH + TW  G     + +L
Sbjct: 970  AALPQSQRSSTPSSEIGATPPSSPHHILTWQTGEATENSPIL 1011

>FRM4A_MOUSE (Q8BIE6) FERM domain-containing protein 4A|
          Length = 1020

 Score = 31.6 bits (70), Expect = 1.1
 Identities = 28/102 (27%), Positives = 43/102 (42%), Gaps = 15/102 (14%)
 Frame = -3

Query: 455  YQNQAKSHST-AVYKHTPSIPSLTINLTRAQPASSSPLAHIQHKRGDNRTRKPRMNCLDT 279
            YQ    SH   +   HT S    T + + +Q ++SS    + H R    TR P+M    +
Sbjct: 913  YQRSTASHKEHSRLSHTSS----TSSDSGSQYSTSSQSTFVAHSRV---TRMPQMCKATS 965

Query: 278  AAGPES--------------PTSPHAVATWHDGRRPGGAAVL 195
            AA P+S              P+SPH + TW  G     + ++
Sbjct: 966  AALPQSQRSSTPSSEIGATPPSSPHHILTWQTGEATENSPIM 1007

>HAP2_SCHPO (P24488) Transcriptional activator hap2|
          Length = 334

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 13/18 (72%), Positives = 13/18 (72%)
 Frame = +1

Query: 16  HAMRRARGTGGRFLNTKK 69
           HAMRR RG GGRFL   K
Sbjct: 52  HAMRRPRGPGGRFLTADK 69

>ETS3_DROME (P29774) DNA-binding protein D-ETS-3|
          Length = 490

 Score = 30.4 bits (67), Expect = 2.5
 Identities = 23/79 (29%), Positives = 37/79 (46%)
 Frame = -3

Query: 446 QAKSHSTAVYKHTPSIPSLTINLTRAQPASSSPLAHIQHKRGDNRTRKPRMNCLDTAAGP 267
           Q  S +       P++PSLT        ASSS  +H++HK    R  K  ++C  T++  
Sbjct: 171 QVTSGTLDAVSAAPALPSLT--------ASSS--SHVEHKV---RADKSTLDCATTSSHA 217

Query: 266 ESPTSPHAVATWHDGRRPG 210
            +P+S  + +    GR  G
Sbjct: 218 AAPSSSSSASDHQQGRISG 236

>NFYA9_ARATH (Q945M9) Nuclear transcription factor Y subunit A-9 (AtNF-YA-9)|
          Length = 303

 Score = 30.0 bits (66), Expect = 3.3
 Identities = 13/20 (65%), Positives = 13/20 (65%)
 Frame = +1

Query: 16  HAMRRARGTGGRFLNTKKDE 75
           HAMRR RGTGGRF      E
Sbjct: 209 HAMRRPRGTGGRFAKKTNTE 228

>SDK2_MOUSE (Q6V4S5) Protein sidekick-2 precursor|
          Length = 2176

 Score = 29.6 bits (65), Expect = 4.3
 Identities = 15/49 (30%), Positives = 23/49 (46%)
 Frame = -3

Query: 395 SLTINLTRAQPASSSPLAHIQHKRGDNRTRKPRMNCLDTAAGPESPTSP 249
           +L I  T A  A    +  +  K GDN+T +P    ++   GP  P +P
Sbjct: 171 TLVILSTVAPDAGRYYVQAVNDKNGDNKTSQPITLAVENVGGPADPIAP 219

>GTR10_HUMAN (O95528) Solute carrier family 2, facilitated glucose transporter|
           member 10 (Glucose transporter type 10)
          Length = 541

 Score = 29.3 bits (64), Expect = 5.6
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 1/80 (1%)
 Frame = -3

Query: 467 AVPNYQNQAKSHSTAVYKHTPSIPSLT-INLTRAQPASSSPLAHIQHKRGDNRTRKPRMN 291
           AVPN   Q      +      S+P +   N  + +P  S+      H R  + +  PR+ 
Sbjct: 331 AVPNATGQTGLPGDSGLLQDSSLPPIPRTNEDQREPILSTAKKTKPHPRSGDPSAPPRLA 390

Query: 290 CLDTAAGPESPTSPHAVATW 231
                 GP  P   HA+  W
Sbjct: 391 LSSALPGPPLPARGHALLRW 410

>WRK72_ARATH (Q9LXG8) Probable WRKY transcription factor 72 (WRKY DNA-binding|
           protein 72)
          Length = 548

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 19/69 (27%), Positives = 35/69 (50%), Gaps = 5/69 (7%)
 Frame = -3

Query: 413 HTPSIPSLTINLTRAQ--PASSSPLAHIQHKRGDN---RTRKPRMNCLDTAAGPESPTSP 249
           H+P  P++T++LT  Q   +SSS L  +   +  N   R     +N   T++   +P++ 
Sbjct: 340 HSPLHPTVTLDLTAPQHSSSSSSSLLSLNFNKFSNSFQRFPSTSLNFSSTSSTSSNPSTL 399

Query: 248 HAVATWHDG 222
           +  A W +G
Sbjct: 400 NLPAIWGNG 408

>DSG3_MOUSE (O35902) Desmoglein-3 precursor (130 kDa pemphigus vulgaris antigen|
           homolog)
          Length = 993

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 18/54 (33%), Positives = 26/54 (48%)
 Frame = +1

Query: 211 PGRRPSCHVATAWGLVGDSGPAAVSRQFILGFRVLLSPLLCWMCASGEELAGCA 372
           P R P+ +  ++W L    GPAA+    +    +LL+PLL   C  G    G A
Sbjct: 601 PSREPNTYGESSWRL----GPAAIGLILLGLLMLLLAPLLLLTCDCGSGPIGGA 650

>HAP2_KLULA (P53768) Transcriptional activator HAP2|
          Length = 300

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 16  HAMRRARGTGGRFL 57
           HAMRR RG GGRFL
Sbjct: 228 HAMRRPRGQGGRFL 241

>VINEX_HUMAN (O60504) Vinexin (Sorbin and SH3 domain-containing protein 3)|
           (SH3-containing adapter molecule 1) (SCAM-1)
          Length = 671

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = -3

Query: 311 TRKPRMNCLDTAAGPESPTSPHAVATWHDGRRPGGAAVL 195
           +R+PR+   D   GP+ PTSP   A     R P   + L
Sbjct: 513 SREPRLRLCDD--GPQLPTSPRLTAAARSARHPSSPSAL 549

>COL16_ARATH (Q8RWD0) Zinc finger protein CONSTANS-LIKE 16|
          Length = 417

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 17/46 (36%), Positives = 25/46 (54%)
 Frame = -3

Query: 359 SSSPLAHIQHKRGDNRTRKPRMNCLDTAAGPESPTSPHAVATWHDG 222
           S++PLA  +H+R   +T  P    +   +   S + PH VATWH G
Sbjct: 46  SANPLAR-RHERVRLKTASP---AVVKHSNHSSASPPHEVATWHHG 87

>HAP2_YEAST (P06774) Transcriptional activator HAP2|
          Length = 265

 Score = 28.9 bits (63), Expect = 7.3
 Identities = 12/14 (85%), Positives = 12/14 (85%)
 Frame = +1

Query: 16  HAMRRARGTGGRFL 57
           HAMRR RG GGRFL
Sbjct: 202 HAMRRPRGEGGRFL 215

>WDR8_HUMAN (Q9P2S5) WD-repeat protein 8|
          Length = 460

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 13/26 (50%), Positives = 16/26 (61%)
 Frame = +1

Query: 316 LSPLLCWMCASGEELAGCARVRLIVR 393
           LS LLC     G+ LA C + RL+VR
Sbjct: 9   LSSLLCKFSPDGKYLASCVQYRLVVR 34

>NFYA1_ARATH (Q9LXV5) Nuclear transcription factor Y subunit A-1 (AtNF-YA-1)|
           (Transcriptional activator HAP2A)
          Length = 272

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/20 (70%), Positives = 15/20 (75%)
 Frame = +1

Query: 16  HAMRRARGTGGRFLNTKKDE 75
           HAMRRAR +GGRF   KK E
Sbjct: 215 HAMRRARASGGRF--AKKSE 232

>TOP2A_MOUSE (Q01320) DNA topoisomerase 2-alpha (EC 5.99.1.3) (DNA topoisomerase|
           II, alpha isozyme)
          Length = 1528

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 10/34 (29%), Positives = 21/34 (61%)
 Frame = -3

Query: 320 DNRTRKPRMNCLDTAAGPESPTSPHAVATWHDGR 219
           DN+ R P+M+C+     PE+    + ++ W++G+
Sbjct: 93  DNKQRDPKMSCIRVTIDPEN----NVISIWNNGK 122

>PER_ANTPE (Q17062) Period circadian protein|
          Length = 849

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)
 Frame = -3

Query: 413 HTPSIPSLTINLTRA-QPASSSPLAHIQHKRGDNRTRKPRMNCLDTAAGPESPTSP 249
           +TPS+     NL R+ +   S P+A+  H     + R+ +  C    A P S T+P
Sbjct: 681 NTPSVYEKPHNLKRSSKQMESEPIANKHHCPSSRQFRRKQTTCSGGFAQPPSATNP 736

>CUTC_XYLFT (Q87DU4) Copper homeostasis protein cutC|
          Length = 267

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 24/65 (36%), Positives = 29/65 (44%), Gaps = 2/65 (3%)
 Frame = +1

Query: 229 CHVATAWGLVGDSGPAAVSRQFI-LGFRVLLSPLLCWMCASGEEL-AGCARVRLIVRLGM 402
           CH     GL    G  AV R+ + +   VL+ P       S EE+   C  V   VRLG 
Sbjct: 52  CHGLEGGGLTPSYGMLAVVRERLHIPLYVLIRPRGGDFVFSEEEMEVMCGDVECCVRLGC 111

Query: 403 DGVCL 417
           DGV L
Sbjct: 112 DGVVL 116

>SECD_RICPR (Q9ZCW8) Protein-export membrane protein secD|
          Length = 518

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +3

Query: 243 GVGAGRGFRACCCVQAIHSWLSRSVITPLVLDV 341
           GVGA +GF     +  I S  S  +IT L++DV
Sbjct: 473 GVGAIKGFAVALTIGIISSMFSAIIITKLLIDV 505

>MDC1_RAT (Q5U2M8) Mediator of DNA damage checkpoint protein 1|
          Length = 1279

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 25/88 (28%), Positives = 38/88 (43%), Gaps = 16/88 (18%)
 Frame = -3

Query: 464  VPNYQNQA---KSHSTAVYKHTPSIP------------SLTINLT-RAQPASSSPLAHIQ 333
            +PN  +Q    ++HST+V    P +             S+T NL  RAQP +  P+    
Sbjct: 911  IPNLTSQVTEGRAHSTSVNMPEPVLTGPEAQPLTSAEQSVTSNLNPRAQPLTLEPVPQTS 970

Query: 332  HKRGDNRTRKPRMNCLDTAAGPESPTSP 249
            H+R    T K          GP+S ++P
Sbjct: 971  HQRRRRATGK--QGSRTAPVGPKSYSTP 996

>TREY_MYCTU (Q10768) Putative maltooligosyl trehalose synthase (EC 5.4.99.15)|
           ((1,4)-alpha-D-glucan 1-alpha-D-glucosylmutase)
          Length = 765

 Score = 28.5 bits (62), Expect = 9.6
 Identities = 19/40 (47%), Positives = 21/40 (52%), Gaps = 6/40 (15%)
 Frame = -3

Query: 290 CLDTAAGPESPTSPHAVATW--HDGR----RPGGAAVLGC 189
           C+  AAG + P  P AVA    H GR     PG AAVL C
Sbjct: 347 CIAAAAGADHPLLPAAVAALLRHIGRYRCDYPGQAAVLPC 386


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 68,599,470
Number of Sequences: 219361
Number of extensions: 1385471
Number of successful extensions: 4692
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 4451
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4682
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3246866728
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)