ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal32h08
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1LEC_PEA (P02867) Lectin precursor [Contains: Lectin beta chain; ... 39 0.013
2PP1B_DROME (P48462) Serine/threonine-protein phosphatase beta is... 32 1.2
3LEC_VICFA (P02871) Favin (Lectin) [Contains: Favin beta chain; F... 32 1.5
4LEC_LENCU (P02870) Lectin precursor [Contains: Lectin beta chain... 31 2.6
5LEC_LENCT (Q8VXF2) Lectin precursor [Contains: Lectin beta chain... 31 2.6
6LEC_LENCC (Q93WH6) Lectin precursor [Contains: Lectin beta chain... 31 2.6
7YNK2_CAEEL (P34553) Hypothetical protein R10E12.2 29 10.0
8LEC_LENCO (Q93X49) Lectin precursor [Contains: Lectin beta chain... 29 10.0

>LEC_PEA (P02867) Lectin precursor [Contains: Lectin beta chain; Lectin|
           alpha chain]
          Length = 275

 Score = 38.5 bits (88), Expect = 0.013
 Identities = 34/114 (29%), Positives = 50/114 (43%)
 Frame = +3

Query: 156 DHLVEIDVKSLVSVNHTTSSNRASRASNMFESTKLSSAKPMQVWIHYNGTEQMLNVTLEE 335
           D  + IDV S+ SVN               +S KL + +   V I +N    +L V+L  
Sbjct: 164 DRHIGIDVNSIKSVNT--------------KSWKLQNGEEANVVIAFNAATNVLTVSLT- 208

Query: 336 FDDHVERSKPLSLPQLSSTVNFPPLLSNSEHVYAGFSAANGKTYCSRYVIGWSF 497
           + + +E     S   LS  V+   ++   E V  GFSA  G  Y +  V+ WSF
Sbjct: 209 YPNSLEEENVTSYT-LSDVVSLKDVVP--EWVRIGFSATTGAEYAAHEVLSWSF 259



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>PP1B_DROME (P48462) Serine/threonine-protein phosphatase beta isoform (EC|
           3.1.3.16) (Protein flap wing)
          Length = 330

 Score = 32.0 bits (71), Expect = 1.2
 Identities = 17/31 (54%), Positives = 19/31 (61%)
 Frame = -2

Query: 475 RLQYVFPFAAENPAYTCSEFDNKGGKLTVDD 383
           R Q V  F+A N    C EFDN GG +TVDD
Sbjct: 259 RRQLVTLFSAPN---YCGEFDNAGGMMTVDD 286



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>LEC_VICFA (P02871) Favin (Lectin) [Contains: Favin beta chain; Favin alpha|
           chain]
          Length = 233

 Score = 31.6 bits (70), Expect = 1.5
 Identities = 25/85 (29%), Positives = 38/85 (44%)
 Frame = +3

Query: 246 ESTKLSSAKPMQVWIHYNGTEQMLNVTLEEFDDHVERSKPLSLPQLSSTVNFPPLLSNSE 425
           +S  L + +   V I +N T  +L+VTL            L+   LS  V    ++   E
Sbjct: 151 KSWNLQNGEEAHVAISFNATTNVLSVTL--------LYPNLTGYTLSEVVPLKDVVP--E 200

Query: 426 HVYAGFSAANGKTYCSRYVIGWSFM 500
            V  GFSA  G  Y +  V+ W+F+
Sbjct: 201 WVRIGFSATTGAEYATHEVLSWTFL 225



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>LEC_LENCU (P02870) Lectin precursor [Contains: Lectin beta chain; Lectin|
           alpha chain]
          Length = 275

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 31/111 (27%), Positives = 46/111 (41%)
 Frame = +3

Query: 165 VEIDVKSLVSVNHTTSSNRASRASNMFESTKLSSAKPMQVWIHYNGTEQMLNVTLEEFDD 344
           + IDV S+ SVN               +S  L + +   V I +N    +L VTL  + +
Sbjct: 167 IGIDVNSIKSVNT--------------KSWNLQNGERANVVIAFNAATNVLTVTLT-YPN 211

Query: 345 HVERSKPLSLPQLSSTVNFPPLLSNSEHVYAGFSAANGKTYCSRYVIGWSF 497
            +E     S   L+  V    ++   E V  GFSA  G  + +  V  WSF
Sbjct: 212 SLEEENVTSYT-LNEVVPLKDVVP--EWVRIGFSATTGAEFAAHEVHSWSF 259



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>LEC_LENCT (Q8VXF2) Lectin precursor [Contains: Lectin beta chain; Lectin|
           alpha chain]
          Length = 275

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 31/111 (27%), Positives = 46/111 (41%)
 Frame = +3

Query: 165 VEIDVKSLVSVNHTTSSNRASRASNMFESTKLSSAKPMQVWIHYNGTEQMLNVTLEEFDD 344
           + IDV S+ SVN               +S  L + +   V I +N    +L VTL  + +
Sbjct: 167 IGIDVNSIKSVNT--------------KSWNLQNGERANVVIAFNAATNVLTVTLT-YPN 211

Query: 345 HVERSKPLSLPQLSSTVNFPPLLSNSEHVYAGFSAANGKTYCSRYVIGWSF 497
            +E     S   L+  V    ++   E V  GFSA  G  + +  V  WSF
Sbjct: 212 SLEEENVTSYT-LNEVVPLKDVVP--EWVRIGFSATTGAEFAAHEVHSWSF 259



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>LEC_LENCC (Q93WH6) Lectin precursor [Contains: Lectin beta chain; Lectin|
           alpha chain]
          Length = 275

 Score = 30.8 bits (68), Expect = 2.6
 Identities = 31/111 (27%), Positives = 46/111 (41%)
 Frame = +3

Query: 165 VEIDVKSLVSVNHTTSSNRASRASNMFESTKLSSAKPMQVWIHYNGTEQMLNVTLEEFDD 344
           + IDV S+ SVN               +S  L + +   V I +N    +L VTL  + +
Sbjct: 167 IGIDVNSIKSVNT--------------KSWNLQNGERANVVIAFNAATNVLTVTLT-YPN 211

Query: 345 HVERSKPLSLPQLSSTVNFPPLLSNSEHVYAGFSAANGKTYCSRYVIGWSF 497
            +E     S   L+  V    ++   E V  GFSA  G  + +  V  WSF
Sbjct: 212 SLEEENVTSYT-LNEVVPLKDVVP--EWVRIGFSATTGAEFAAHEVHSWSF 259



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>YNK2_CAEEL (P34553) Hypothetical protein R10E12.2|
          Length = 395

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
 Frame = +2

Query: 455 WKNILQPICYWMEFHEKWT-STTTKPLESPSS 547
           W+   +P+ YWM    K + ST T PL+S SS
Sbjct: 273 WEQQQRPLTYWMTSSNKSSESTMTSPLDSASS 304



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>LEC_LENCO (Q93X49) Lectin precursor [Contains: Lectin beta chain; Lectin|
           alpha chain]
          Length = 275

 Score = 28.9 bits (63), Expect = 10.0
 Identities = 30/111 (27%), Positives = 46/111 (41%)
 Frame = +3

Query: 165 VEIDVKSLVSVNHTTSSNRASRASNMFESTKLSSAKPMQVWIHYNGTEQMLNVTLEEFDD 344
           + IDV S+ SV+               +S  L + +   V I +N    +L VTL  + +
Sbjct: 167 IGIDVNSIKSVST--------------KSWNLQNGERANVVIAFNAATNVLTVTLT-YPN 211

Query: 345 HVERSKPLSLPQLSSTVNFPPLLSNSEHVYAGFSAANGKTYCSRYVIGWSF 497
            +E     S   L+  V    ++   E V  GFSA  G  + +  V  WSF
Sbjct: 212 SLEEENVTSYT-LNEVVPLKDVVP--EWVRIGFSATTGAEFAAHEVHSWSF 259


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,585,498
Number of Sequences: 219361
Number of extensions: 1409555
Number of successful extensions: 4033
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 3948
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4033
length of database: 80,573,946
effective HSP length: 105
effective length of database: 57,541,041
effective search space used: 4430660157
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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