ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal32f21
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1dbj|AK067805.1| Oryza sativa (japonica cultivar-group) cDNA clon... 153 8e-34
2ref|XM_550252.1| Oryza sativa (japonica cultivar-group), mRNA 145 2e-31
3dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
4dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
5dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic D... 84 6e-13
6gb|AY106078.1| Zea mays PCO121381 mRNA sequence 50 0.009
7emb|BX324129.11| Zebrafish DNA sequence from clone CH211-221D5 i... 46 0.13
8gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, com... 44 0.53
9gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, compl... 44 0.53
10gb|AC084621.1|CBRG44O14 Caenorhabditis briggsae cosmid G44O14, c... 42 2.1
11emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-8... 42 2.1
12gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete... 42 2.1
13gb|AC122315.5| Mus musculus BAC clone RP23-302P6 from 10, comple... 42 2.1
14gb|AY394958.1| Danio rerio clone RK053A3F02 BAF53 mRNA, complete... 40 8.3
15ref|NM_173240.1| Danio rerio BRG1/brm-associated factor 53A (baf... 40 8.3
16gb|AY510069.1| Fusarium sporotrichioides 5.8S ribosomal RNA gene... 40 8.3
17gb|AF414973.1| Fusarium sporotrichioides var. minor strain BBA 6... 40 8.3
18gb|AF414972.1| Fusarium sporotrichioides strain BBA 69072 16S ri... 40 8.3
19gb|AF414970.1| Fusarium sporotrichioides strain BBA 70746 16S ri... 40 8.3
20gb|AF414969.1| Fusarium pulverosum strain IBT 8051 16S ribosomal... 40 8.3
21gb|BC045889.1| Danio rerio BRG1/brm-associated factor 53A, mRNA ... 40 8.3
22gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, com... 40 8.3
23gb|AY680864.1| Fusarium langsethiae and 5.8S ribosomal RNA genes... 40 8.3
24emb|CR726316.2|CNS0GNDE Tetraodon nigroviridis full-length cDNA 40 8.3
25ref|XM_649251.1| Entamoeba histolytica HM-1:IMSS hypothetical pr... 40 8.3
26emb|AL672040.10| Human DNA sequence from clone RP11-449L4 on chr... 40 8.3
27emb|AL513170.16| Human DNA sequence from clone RP11-285B4 on chr... 40 8.3
28gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, com... 40 8.3
29gb|DQ093674.1| Fusarium sporotrichioides isolate aurim1238 small... 40 8.3
30emb|AJ345036.1|TRU345036 Takifugu rubripes a2a1AR gene for alpha... 40 8.3
31gb|AC123903.2| Homo sapiens chromosome 3 clone RP11-182A24, comp... 40 8.3
32gb|AY099520.1| Danio rerio BRG1/brm-associated factor 53A (baf53... 40 8.3
33gb|AC011120.11| Homo sapiens chromosome 17, clone RP11-171G2, co... 40 8.3
34gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, co... 40 8.3
35gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 8.3
36ref|XM_682012.1| PREDICTED: Danio rerio similar to BRG1/brm-asso... 40 8.3
37gb|AC011666.28| Human Chromosome 1q21 BAC 236c22, complete sequence 40 8.3
38dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
39gb|AC152159.6| Mus musculus chromosome 15, clone RP23-10O8, comp... 40 8.3
40gb|AC011529.4| Homo sapiens chromosome 19 clone LLNLR-227F11, co... 40 8.3
41dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
42dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic D... 40 8.3
43ref|XM_556836.1| Anopheles gambiae str. PEST ENSANGP00000027170 ... 40 8.3
44ref|XM_309080.2| Anopheles gambiae str. PEST ENSANGP00000019588 ... 40 8.3
45emb|AM162681.1| Uncultured Fusarium sp. ITS1, 5.8S rRNA gene and... 40 8.3
46gb|AF111059.1|AF111059 Fusarium chlamydosporum strain BBA62170 1... 40 8.3
47gb|AF111055.1|AF111055 Fusarium sporotrichioides strain BBA69073... 40 8.3
48gb|AF111053.1|AF111053 Fusarium sporotrichioides strain RUS446 1... 40 8.3
49gb|U85541.1|FSU85541 Fusarium sporotrichioides internal transcri... 40 8.3
50gb|AF006348.1|AF006348 Fusarium sporotrichioides NRRL 25479 inte... 40 8.3
51gb|AF006347.1|AF006347 Fusarium sporotrichioides NRRL 25474 inte... 40 8.3
52emb|AL591704.7| Human DNA sequence from clone RP1-128L15 on chro... 40 8.3
53gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome 40 8.3
54gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complet... 40 8.3
55gb|U85533.1|GAU85533 Gibberella acuminata internal transcribed s... 40 8.3
56tpd|BR000043.1| TPA: TPA_exp: Homo sapiens S100 calcium binding ... 40 8.3
57emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, ... 40 8.3
58emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, ... 40 8.3
59gb|U38553.1|FSU38553 Fusarium sporotrichioides 5.8S ribosomal RN... 40 8.3
60gb|U38551.1|FSU38551 Fusarium sporotrichioides 5.8S ribosomal RN... 40 8.3
61gb|AC080037.11| Homo sapiens chromosome 17, clone CTD-3010D24, c... 40 8.3
62gb|AY188917.1| Fusarium sporotrichioides 18S ribosomal RNA gene,... 40 8.3
63dbj|D88424.1| Cyanidium caldarium mRNA for plasma membrane H+-AT... 40 8.3 
>dbj|AK067805.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013119N08, full
           insert sequence
          Length = 1301

 Score =  153 bits (77), Expect = 8e-34
 Identities = 203/245 (82%)
 Strand = Plus / Plus

                                                                       
Query: 199 caggattaacttcggcaaacggaaagctgtgtgtactgtgtgagcaatactcaaccgaag 258
           |||| |||||||| || || ||||||||||||  ||| || ||||| |||||||| ||||
Sbjct: 413 cagggttaacttcagccaatggaaagctgtgtcaactatgcgagcagtactcaacggaag 472

                                                                       
Query: 259 ctctggtctacctgcgacaaaaagaaacccaaaccgagattctcagtgtcctccaccaca 318
           ||||| ||||||| | |||||| ||||||||||| |||||||| ||  ||||||||||  
Sbjct: 473 ctctgttctacctccaacaaaatgaaacccaaactgagattcttagcatcctccaccatg 532

                                                                       
Query: 319 cgtgtgcaagtcttggtcctctaagacagcagtgcatgacgctggtcgactactacattc 378
           | || ||||   |||| ||||||| |||||||||||| || ||||| |||||||||||||
Sbjct: 533 catgcgcaaacgttggacctctaaaacagcagtgcatcactctggttgactactacattc 592

                                                                       
Query: 379 ccgctttcttcttggaggtttctgtgcttaaacctgaggagttatgtgaatcagcgcacc 438
           ||  ||||||||||||||||||  || | | ||||||  |||| |||||||||| ||| |
Sbjct: 593 cccttttcttcttggaggtttcgatggtaacacctgaaaagttctgtgaatcagtgcatc 652

                
Query: 439 tctgc 443
           |||||
Sbjct: 653 tctgc 657



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                       
Query: 486 tgcggcctatgccatcatgttcttgttgaagttcttaccatgcttaaagatcccaacacc 545
           |||||| |||||||||||||||||||||||||||||| |||||| || |||||  |||  
Sbjct: 700 tgcggcatatgccatcatgttcttgttgaagttcttatcatgctaaaggatcctgacatg 759

                                                       
Query: 546 aagctggagatagtcgggcttcttttcaaaacatgcagcaaggc 589
            ||||||||||||||| | |  || ||||| |||||||||||||
Sbjct: 760 cagctggagatagtcgagatatttctcaaagcatgcagcaaggc 803
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>ref|XM_550252.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1301

 Score =  145 bits (73), Expect = 2e-31
 Identities = 202/245 (82%)
 Strand = Plus / Plus

                                                                       
Query: 199 caggattaacttcggcaaacggaaagctgtgtgtactgtgtgagcaatactcaaccgaag 258
           |||| |||||||| || || ||||||||||||  ||| || ||||| |||||||| ||||
Sbjct: 413 cagggttaacttcagccaatggaaagctgtgtcaactatgcgagcagtactcaacggaag 472

                                                                       
Query: 259 ctctggtctacctgcgacaaaaagaaacccaaaccgagattctcagtgtcctccaccaca 318
           | ||| ||||||| | |||||| ||||||||||| |||||||| ||  ||||||||||  
Sbjct: 473 cactgttctacctccaacaaaatgaaacccaaactgagattcttagcatcctccaccatg 532

                                                                       
Query: 319 cgtgtgcaagtcttggtcctctaagacagcagtgcatgacgctggtcgactactacattc 378
           | || ||||   |||| ||||||| |||||||||||| || ||||| |||||||||||||
Sbjct: 533 catgcgcaaacgttggacctctaaaacagcagtgcatcactctggttgactactacattc 592

                                                                       
Query: 379 ccgctttcttcttggaggtttctgtgcttaaacctgaggagttatgtgaatcagcgcacc 438
           ||  ||||||||||||||||||  || | | ||||||  |||| |||||||||| ||| |
Sbjct: 593 cccttttcttcttggaggtttcgatggtaacacctgaaaagttctgtgaatcagtgcatc 652

                
Query: 439 tctgc 443
           |||||
Sbjct: 653 tctgc 657



 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 89/104 (85%)
 Strand = Plus / Plus

                                                                       
Query: 486 tgcggcctatgccatcatgttcttgttgaagttcttaccatgcttaaagatcccaacacc 545
           |||||| |||||||||||||||||||||||||||||| |||||| || |||||  |||  
Sbjct: 700 tgcggcatatgccatcatgttcttgttgaagttcttatcatgctaaaggatcctgacatg 759

                                                       
Query: 546 aagctggagatagtcgggcttcttttcaaaacatgcagcaaggc 589
            ||||||||||||||| | |  || ||||| |||||||||||||
Sbjct: 760 cagctggagatagtcgagatatttctcaaagcatgcagcaaggc 803
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                           
Query: 199     caggattaacttcggcaaacggaaagctgtgtgtactgtgtgagcaatactcaaccgaag 258
               |||| |||||||| || || ||||||||||||  ||| || ||||| |||||||| ||||
Sbjct: 3423090 cagggttaacttcagccaatggaaagctgtgtcaactatgcgagcagtactcaacggaag 3423149

                                                                         
Query: 259     ctctggtctacctgcgacaaaaagaaacccaaaccgagattctcagtgtcctccacca 316
               | ||| ||||||| | |||||| ||||||||||| |||||||| ||  ||||||||||
Sbjct: 3423150 cactgttctacctccaacaaaatgaaacccaaactgagattcttagcatcctccacca 3423207



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                    
Query: 486     tgcggcctatgccatcatgttcttgttgaagttcttaccatgcttaaagatcc 538
               |||||| |||||||||||||||||||||||||||||| |||||| || |||||
Sbjct: 3423468 tgcggcatatgccatcatgttcttgttgaagttcttatcatgctaaaggatcc 3423520



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                           
Query: 348     cagtgcatgacgctggtcgactactacattcccgctttcttcttggaggtttctgtgctt 407
               |||||||| || ||||| |||||||||||||||  ||||||||||||||||||  || | 
Sbjct: 3423330 cagtgcatcactctggttgactactacattccccttttcttcttggaggtttcgatggta 3423389

                                                   
Query: 408     aaacctgaggagttatgtgaatcagcgcacctctgc 443
               | ||||||  |||| |||||||||| ||| ||||||
Sbjct: 3423390 acacctgaaaagttctgtgaatcagtgcatctctgc 3423425
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>dbj|AP003301.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0701D05
          Length = 172161

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                          
Query: 199    caggattaacttcggcaaacggaaagctgtgtgtactgtgtgagcaatactcaaccgaag 258
              |||| |||||||| || || ||||||||||||  ||| || ||||| |||||||| ||||
Sbjct: 101460 cagggttaacttcagccaatggaaagctgtgtcaactatgcgagcagtactcaacggaag 101519

                                                                        
Query: 259    ctctggtctacctgcgacaaaaagaaacccaaaccgagattctcagtgtcctccacca 316
              | ||| ||||||| | |||||| ||||||||||| |||||||| ||  ||||||||||
Sbjct: 101520 cactgttctacctccaacaaaatgaaacccaaactgagattcttagcatcctccacca 101577



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                   
Query: 486    tgcggcctatgccatcatgttcttgttgaagttcttaccatgcttaaagatcc 538
              |||||| |||||||||||||||||||||||||||||| |||||| || |||||
Sbjct: 101838 tgcggcatatgccatcatgttcttgttgaagttcttatcatgctaaaggatcc 101890



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                          
Query: 348    cagtgcatgacgctggtcgactactacattcccgctttcttcttggaggtttctgtgctt 407
              |||||||| || ||||| |||||||||||||||  ||||||||||||||||||  || | 
Sbjct: 101700 cagtgcatcactctggttgactactacattccccttttcttcttggaggtttcgatggta 101759

                                                  
Query: 408    aaacctgaggagttatgtgaatcagcgcacctctgc 443
              | ||||||  |||| |||||||||| ||| ||||||
Sbjct: 101760 acacctgaaaagttctgtgaatcagtgcatctctgc 101795
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>dbj|AP002912.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0028E10
          Length = 140791

 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 99/118 (83%)
 Strand = Plus / Plus

                                                                        
Query: 199  caggattaacttcggcaaacggaaagctgtgtgtactgtgtgagcaatactcaaccgaag 258
            |||| |||||||| || || ||||||||||||  ||| || ||||| |||||||| ||||
Sbjct: 9850 cagggttaacttcagccaatggaaagctgtgtcaactatgcgagcagtactcaacggaag 9909

                                                                      
Query: 259  ctctggtctacctgcgacaaaaagaaacccaaaccgagattctcagtgtcctccacca 316
            | ||| ||||||| | |||||| ||||||||||| |||||||| ||  ||||||||||
Sbjct: 9910 cactgttctacctccaacaaaatgaaacccaaactgagattcttagcatcctccacca 9967



 Score = 73.8 bits (37), Expect = 6e-10
 Identities = 49/53 (92%)
 Strand = Plus / Plus

                                                                  
Query: 486   tgcggcctatgccatcatgttcttgttgaagttcttaccatgcttaaagatcc 538
             |||||| |||||||||||||||||||||||||||||| |||||| || |||||
Sbjct: 10228 tgcggcatatgccatcatgttcttgttgaagttcttatcatgctaaaggatcc 10280



 Score = 71.9 bits (36), Expect = 2e-09
 Identities = 81/96 (84%)
 Strand = Plus / Plus

                                                                         
Query: 348   cagtgcatgacgctggtcgactactacattcccgctttcttcttggaggtttctgtgctt 407
             |||||||| || ||||| |||||||||||||||  ||||||||||||||||||  || | 
Sbjct: 10090 cagtgcatcactctggttgactactacattccccttttcttcttggaggtttcgatggta 10149

                                                 
Query: 408   aaacctgaggagttatgtgaatcagcgcacctctgc 443
             | ||||||  |||| |||||||||| ||| ||||||
Sbjct: 10150 acacctgaaaagttctgtgaatcagtgcatctctgc 10185
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>gb|AY106078.1| Zea mays PCO121381 mRNA sequence
          Length = 740

 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 495 tgccatcatgttcttgttgaagttcttaccatgcttaaagatcccaaca 543
           ||||| |||||| |||||||  |||||| |||||||||||| |||||||
Sbjct: 645 tgccaccatgttgttgttgagattcttatcatgcttaaagaccccaaca 693



 Score = 50.1 bits (25), Expect = 0.009
 Identities = 43/49 (87%)
 Strand = Plus / Plus

                                                            
Query: 349 agtgcatgacgctggtcgactactacattcccgctttcttcttggaggt 397
           ||||||| |||||||| ||||||||| | |||  |||||||||||||||
Sbjct: 499 agtgcatcacgctggttgactactacgtaccccttttcttcttggaggt 547
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>emb|BX324129.11| Zebrafish DNA sequence from clone CH211-221D5 in linkage group 2,
             complete sequence
          Length = 111186

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Plus

                                    
Query: 390   ttggaggtttctgtgcttaaacc 412
             |||||||||||||||||||||||
Sbjct: 21917 ttggaggtttctgtgcttaaacc 21939
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>gb|AC110520.12| Mus musculus chromosome 7, clone RP23-24N16, complete sequence
          Length = 248540

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 173    aagcttccctcttgcaagcaaa 194
              ||||||||||||||||||||||
Sbjct: 167113 aagcttccctcttgcaagcaaa 167134
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>gb|CP000271.1| Burkholderia xenovorans LB400 chromosome 2, complete sequence
          Length = 3363523

 Score = 44.1 bits (22), Expect = 0.53
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                    
Query: 357    acgctggtcgactactacattc 378
              ||||||||||||||||||||||
Sbjct: 330329 acgctggtcgactactacattc 330350
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>gb|AC084621.1|CBRG44O14 Caenorhabditis briggsae cosmid G44O14, complete sequence
          Length = 42064

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 159 atattgacccaggaaagcttc 179
           |||||||||||||||||||||
Sbjct: 554 atattgacccaggaaagcttc 574
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>emb|AL132800.4|CNS01DTM Human chromosome 14 DNA sequence BAC R-80A15 of library RPCI-11 from
              chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 185251

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 381    gctttcttcttggaggtttct 401
              |||||||||||||||||||||
Sbjct: 171329 gctttcttcttggaggtttct 171309
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>gb|AE000513.1| Deinococcus radiodurans R1 chromosome 1, complete sequence
          Length = 2648638

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                    
Query: 84      ctcgcgctggcctttaccgcc 104
               |||||||||||||||||||||
Sbjct: 2040255 ctcgcgctggcctttaccgcc 2040235



 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 78      ctgctgctcgcgctggcctt 97
               ||||||||||||||||||||
Sbjct: 1856070 ctgctgctcgcgctggcctt 1856051
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>gb|AC122315.5| Mus musculus BAC clone RP23-302P6 from 10, complete sequence
          Length = 197288

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 329   tcttggtcctctaagacagcagtgc 353
             ||||||||||||||| |||||||||
Sbjct: 48357 tcttggtcctctaaggcagcagtgc 48333
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>gb|AY394958.1| Danio rerio clone RK053A3F02 BAF53 mRNA, complete cds
          Length = 1929

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 acattcccgctttcttcttg 392
           ||||||||||||||||||||
Sbjct: 623 acattcccgctttcttcttg 642
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>ref|NM_173240.1| Danio rerio BRG1/brm-associated factor 53A (baf53a), mRNA
          Length = 1820

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 acattcccgctttcttcttg 392
           ||||||||||||||||||||
Sbjct: 543 acattcccgctttcttcttg 562
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>gb|AY510069.1| Fusarium sporotrichioides 5.8S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 339

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 68  agatcccaacaccaagctgg 49
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>gb|AF414973.1| Fusarium sporotrichioides var. minor strain BBA 62425 16S ribosomal
           RNA gene, partial sequence; internal transcribed spacer
           1, 5.8S ribosomal RNA gene and internal transcribed
           spacer 2, complete sequence; and 28S ribosomal RNA gene,
           partial sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>gb|AF414972.1| Fusarium sporotrichioides strain BBA 69072 16S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>gb|AF414970.1| Fusarium sporotrichioides strain BBA 70746 16S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>gb|AF414969.1| Fusarium pulverosum strain IBT 8051 16S ribosomal RNA gene, partial
           sequence; internal transcribed spacer 1, 5.8S ribosomal
           RNA gene and internal transcribed spacer 2, complete
           sequence; and 28S ribosomal RNA gene, partial sequence
          Length = 537

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>gb|BC045889.1| Danio rerio BRG1/brm-associated factor 53A, mRNA (cDNA clone
           MGC:56056 IMAGE:3820465), complete cds
          Length = 1862

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 acattcccgctttcttcttg 392
           ||||||||||||||||||||
Sbjct: 553 acattcccgctttcttcttg 572
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>gb|AC113201.15| Mus musculus chromosome 6, clone RP23-271G7, complete sequence
          Length = 205816

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 223   agctgtgtgtactgtgtgagcaat 246
             |||||||||||||||||| |||||
Sbjct: 39990 agctgtgtgtactgtgtgtgcaat 39967
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>gb|AY680864.1| Fusarium langsethiae and 5.8S ribosomal RNA genes and internal
           transcribed spacer 2, complete sequence
          Length = 458

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 339 agatcccaacaccaagctgg 320
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>emb|CR726316.2|CNS0GNDE Tetraodon nigroviridis full-length cDNA
          Length = 1402

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 538 ccaacaccaagctggagata 557
           ||||||||||||||||||||
Sbjct: 359 ccaacaccaagctggagata 378
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>ref|XM_649251.1| Entamoeba histolytica HM-1:IMSS hypothetical protein (56.t00004)
           partial mRNA
          Length = 615

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 502 atgttcttgttgaagttctt 521
           ||||||||||||||||||||
Sbjct: 378 atgttcttgttgaagttctt 359
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>emb|AL672040.10| Human DNA sequence from clone RP11-449L4 on chromosome X, complete
              sequence
          Length = 117297

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 566    tcttttcaaaacatgcagca 585
              ||||||||||||||||||||
Sbjct: 100445 tcttttcaaaacatgcagca 100464
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>emb|AL513170.16| Human DNA sequence from clone RP11-285B4 on chromosome 1, complete
            sequence
          Length = 96748

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 164  gacccaggaaagcttccctc 183
            ||||||||||||||||||||
Sbjct: 7150 gacccaggaaagcttccctc 7169
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>gb|AC139034.7| Mus musculus chromosome 6, clone RP23-350J11, complete sequence
          Length = 247394

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 223    agctgtgtgtactgtgtgagcaat 246
              |||||||||||||||||| |||||
Sbjct: 206196 agctgtgtgtactgtgtgtgcaat 206173
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>gb|DQ093674.1| Fusarium sporotrichioides isolate aurim1238 small subunit ribosomal
           RNA gene, partial sequence; internal transcribed spacer
           1, 5.8S ribosomal RNA gene, and internal transcribed
           spacer 2, complete sequence; and large subunit ribosomal
           RNA gene, partial sequence
          Length = 524

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 378 agatcccaacaccaagctgg 359
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>emb|AJ345036.1|TRU345036 Takifugu rubripes a2a1AR gene for alpha2 a1 adrenergic receptor, exon
            1
          Length = 3601

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  ttcggcaaacggaaagctgt 228
            ||||||||||||||||||||
Sbjct: 3403 ttcggcaaacggaaagctgt 3422
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>gb|AC123903.2| Homo sapiens chromosome 3 clone RP11-182A24, complete sequence
          Length = 162351

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 107   ggttgcagagagcagagatg 126
             ||||||||||||||||||||
Sbjct: 46391 ggttgcagagagcagagatg 46372
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>gb|AY099520.1| Danio rerio BRG1/brm-associated factor 53A (baf53a) mRNA, complete
           cds
          Length = 1820

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 acattcccgctttcttcttg 392
           ||||||||||||||||||||
Sbjct: 543 acattcccgctttcttcttg 562
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>gb|AC011120.11| Homo sapiens chromosome 17, clone RP11-171G2, complete sequence
          Length = 167746

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    gcctgcatattgacccagga 172
              ||||||||||||||||||||
Sbjct: 101274 gcctgcatattgacccagga 101255
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>gb|AC007923.7| Homo sapiens chromosome 17, clone RP11-805L22, complete sequence
          Length = 180270

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 107    ggttgcagagagcagagatg 126
              ||||||||||||||||||||
Sbjct: 138813 ggttgcagagagcagagatg 138794
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 346     agcagtgcatgacgctggtc 365
               ||||||||||||||||||||
Sbjct: 3202829 agcagtgcatgacgctggtc 3202810
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>ref|XM_682012.1| PREDICTED: Danio rerio similar to BRG1/brm-associated factor 53A
           (LOC572888), partial mRNA
          Length = 1379

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 373 acattcccgctttcttcttg 392
           ||||||||||||||||||||
Sbjct: 604 acattcccgctttcttcttg 623
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>gb|AC011666.28| Human Chromosome 1q21 BAC 236c22, complete sequence
          Length = 114364

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 6     agaggggagccggggggcag 25
             ||||||||||||||||||||
Sbjct: 18375 agaggggagccggggggcag 18356
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 149      atatgcctgcatattgaccc 168
                ||||||||||||||||||||
Sbjct: 16100921 atatgcctgcatattgaccc 16100902
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>gb|AC152159.6| Mus musculus chromosome 15, clone RP23-10O8, complete sequence
          Length = 217045

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 219   ggaaagctgtgtgtactgtg 238
             ||||||||||||||||||||
Sbjct: 90801 ggaaagctgtgtgtactgtg 90782
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>gb|AC011529.4| Homo sapiens chromosome 19 clone LLNLR-227F11, complete sequence
          Length = 37522

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 107  ggttgcagagagcagagatg 126
            ||||||||||||||||||||
Sbjct: 6553 ggttgcagagagcagagatg 6534
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>dbj|AP003512.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0618D11
          Length = 150103

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 149    atatgcctgcatattgaccc 168
              ||||||||||||||||||||
Sbjct: 129650 atatgcctgcatattgaccc 129631
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>dbj|AP004681.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, BAC
            clone:OSJNBa0040M10
          Length = 162790

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 149  atatgcctgcatattgaccc 168
            ||||||||||||||||||||
Sbjct: 5714 atatgcctgcatattgaccc 5695
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>ref|XM_556836.1| Anopheles gambiae str. PEST ENSANGP00000027170
           (ENSANGG00000022991), partial mRNA
          Length = 393

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 272 gcgacaaaaagaaacccaaaccga 295
           |||| |||||||||||||||||||
Sbjct: 59  gcgataaaaagaaacccaaaccga 82
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>ref|XM_309080.2| Anopheles gambiae str. PEST ENSANGP00000019588 (ENSANGG00000017099),
            partial mRNA
          Length = 2481

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 501  catgttcttgttgaagttct 520
            ||||||||||||||||||||
Sbjct: 2085 catgttcttgttgaagttct 2066
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>emb|AM162681.1| Uncultured Fusarium sp. ITS1, 5.8S rRNA gene and ITS2, clone (16)5
          Length = 462

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 327 agatcccaacaccaagctgg 308
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>gb|AF111059.1|AF111059 Fusarium chlamydosporum strain BBA62170 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 492

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 339 agatcccaacaccaagctgg 320
to top
>gb|AF111055.1|AF111055 Fusarium sporotrichioides strain BBA69073 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 493

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 339 agatcccaacaccaagctgg 320
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>gb|AF111053.1|AF111053 Fusarium sporotrichioides strain RUS446 18S ribosomal RNA gene,
           partial sequence; internal transcribed spacer 1, 5.8S
           ribosomal RNA gene and internal transcribed spacer 2,
           complete sequence; and 28S ribosomal RNA gene, partial
           sequence
          Length = 492

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 339 agatcccaacaccaagctgg 320
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>gb|U85541.1|FSU85541 Fusarium sporotrichioides internal transcribed spacer ITS1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer
           ITS2, complete sequence
          Length = 522

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
to top
>gb|AF006348.1|AF006348 Fusarium sporotrichioides NRRL 25479 internal transcribed spacer 1,
           5.8S ribosomal RNA gene; and internal transcribed spacer
           2, complete sequence
          Length = 516

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 363 agatcccaacaccaagctgg 344
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>gb|AF006347.1|AF006347 Fusarium sporotrichioides NRRL 25474 internal transcribed spacer 1,
           5.8S ribosomal RNA gene; and internal transcribed spacer
           2, complete sequence
          Length = 515

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 365 agatcccaacaccaagctgg 346
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>emb|AL591704.7| Human DNA sequence from clone RP1-128L15 on chromosome 1q21.1-21.3
             Contains the 5' end of the gene for peptidoglycan
             recognition protein-I-alpha (PGLYRPIalpha), the PGLYRP4
             gene for peptidoglycan recognition protein 4, the S100A9
             gene for S100 calcium binding protein A9 (calgranulin B),
             the S100A12 gene for S100 calcium binding protein A12
             (calgranulin C), a LAPTM4B (lysosomal associated protein
             transmembrane 4 beta) pseudogene, the S100A8 gene for S100
             calcium binding protein A8 (calgranulin A), a S100
             calcium-binding protein pseudogene, the S100A15 gene for
             S100 calcium binding protein A15, a S100 calcium-binding
             protein pseudogene, the gene for a novel S100
             calcium-binding protein and the S100A7 gene for S100
             calcium binding protein A7 (psoriasin 1), complete
             sequence
          Length = 164144

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     agaggggagccggggggcag 25
             ||||||||||||||||||||
Sbjct: 62844 agaggggagccggggggcag 62863
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>gb|CP000155.1| Hahella chejuensis KCTC 2396, complete genome
          Length = 7215267

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 532     aagatcccaacaccaagctg 551
               ||||||||||||||||||||
Sbjct: 4951075 aagatcccaacaccaagctg 4951094
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>gb|AC132480.5| Mus musculus BAC clone RP23-11I14 from 6, complete sequence
          Length = 230313

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 223   agctgtgtgtactgtgtgagcaat 246
             |||||||||||||||||| |||||
Sbjct: 31610 agctgtgtgtactgtgtgtgcaat 31633
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>gb|U85533.1|GAU85533 Gibberella acuminata internal transcribed spacer ITS1, 5.8S
           ribosomal RNA gene, and internal transcribed spacer
           ITS2, complete sequence
          Length = 522

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
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>tpd|BR000043.1| TPA: TPA_exp: Homo sapiens S100 calcium binding protein A7-like gene
             duplications, clone RP1-128L15, chromosome 1q21.1-21.3
          Length = 164144

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 6     agaggggagccggggggcag 25
             ||||||||||||||||||||
Sbjct: 62844 agaggggagccggggggcag 62863
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>emb|AL928701.7| Zebrafish DNA sequence from clone CH211-201H21, complete sequence
          Length = 188745

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    acattcccgctttcttcttg 392
              ||||||||||||||||||||
Sbjct: 144334 acattcccgctttcttcttg 144353
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>emb|AL808141.8| Zebrafish DNA sequence from clone CH211-260N19, complete sequence
          Length = 147111

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 373    acattcccgctttcttcttg 392
              ||||||||||||||||||||
Sbjct: 142871 acattcccgctttcttcttg 142890
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>gb|U38553.1|FSU38553 Fusarium sporotrichioides 5.8S ribosomal RNA gene, complete
           sequence and internal transcribed spacers 1 and 2
          Length = 457

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 338 agatcccaacaccaagctgg 319
to top
>gb|U38551.1|FSU38551 Fusarium sporotrichioides 5.8S ribosomal RNA gene, complete
           sequence and internal transcribed spacers 1 and 2
          Length = 457

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 338 agatcccaacaccaagctgg 319
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>gb|AC080037.11| Homo sapiens chromosome 17, clone CTD-3010D24, complete sequence
          Length = 248996

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 153    gcctgcatattgacccagga 172
              ||||||||||||||||||||
Sbjct: 208377 gcctgcatattgacccagga 208358
to top
>gb|AY188917.1| Fusarium sporotrichioides 18S ribosomal RNA gene, partial sequence;
           internal transcribed spacer 1, 5.8S ribosomal RNA gene
           and internal transcribed spacer 2, complete sequence;
           and 28S ribosomal RNA gene, partial sequence
          Length = 1135

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 533 agatcccaacaccaagctgg 552
           ||||||||||||||||||||
Sbjct: 369 agatcccaacaccaagctgg 350
to top
>dbj|D88424.1| Cyanidium caldarium mRNA for plasma membrane H+-ATPase, complete cds
          Length = 3291

 Score = 40.1 bits (20), Expect = 8.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 41   catggcgatggcttgctcga 60
            ||||||||||||||||||||
Sbjct: 1866 catggcgatggcttgctcga 1847


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,820,268
Number of Sequences: 3902068
Number of extensions: 4820268
Number of successful extensions: 108798
Number of sequences better than 10.0: 63
Number of HSP's better than 10.0 without gapping: 63
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 108481
Number of HSP's gapped (non-prelim): 313
length of query: 611
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 588
effective length of database: 17,143,297,704
effective search space: 10080259049952
effective search space used: 10080259049952
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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