ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal32f07
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1gb|AY838897.1| Oryza sativa (japonica cultivar-group) 9-cis-epox... 256 5e-65
2ref|XM_506928.1| PREDICTED Oryza sativa (japonica cultivar-group... 256 5e-65
3ref|XM_467354.1| Oryza sativa (japonica cultivar-group), mRNA 256 5e-65
4dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 256 5e-65
5dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic D... 256 5e-65
6dbj|AK099580.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 5e-65
7dbj|AK064824.1| Oryza sativa (japonica cultivar-group) cDNA clon... 256 5e-65
8gb|AY838901.1| Oryza sativa (japonica cultivar-group) 9-cis-epox... 48 0.021
9gb|AY838900.1| Oryza sativa (japonica cultivar-group) 9-cis-epox... 48 0.021
10dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.021
11dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 48 0.021
12dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic D... 48 0.021
13dbj|AK119780.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.021
14dbj|AK107649.1| Oryza sativa (japonica cultivar-group) cDNA clon... 48 0.021
15gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome... 48 0.021
16emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb... 48 0.021
17emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb... 48 0.021
18gb|AY838899.1| Oryza sativa (japonica cultivar-group) 9-cis-epox... 46 0.084
19emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0... 46 0.084
20gb|DQ145930.1| Hordeum vulgare subsp. vulgare 9-cis-epoxycaroten... 46 0.084
21dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 46 0.084
22emb|X77865.1|SGKSACPG S.griseus genes for ketosynthase, acyl car... 44 0.33
23emb|BX842649.1| Bdellovibrio bacteriovorus complete genome, stra... 44 0.33
24ref|NM_111838.2| Arabidopsis thaliana unknown protein AT3G10030 ... 42 1.3
25gb|AC010927.5|ATAC010927 Arabidopsis thaliana chromosome III BAC... 42 1.3
26gb|AC128676.2| Homo sapiens BAC clone RP11-65G11 from UL, comple... 42 1.3
27emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete ... 42 1.3
28emb|BX640430.1| Bordetella parapertussis strain 12822, complete ... 42 1.3
29emb|BX640419.1| Bordetella pertussis strain Tohama I, complete g... 42 1.3
30emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete ... 42 1.3
31gb|AY120687.1| Arabidopsis thaliana AT3g10030/T22K18_15 mRNA, co... 42 1.3
32gb|AF375431.1| Arabidopsis thaliana AT3g10030/T22K18_15 mRNA, co... 42 1.3
33gb|AC151535.2| Mus musculus BAC clone RP23-213M8 from chromosome... 42 1.3
34gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 42 1.3
35gb|AC019340.6| Homo sapiens BAC clone RP11-715L17 from 7, comple... 42 1.3
36dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 42 1.3
37gb|AC151531.3| Mus musculus BAC clone RP24-387D22 from chromosom... 42 1.3
38dbj|D78198.1| Pimelobacter sp. DNA for trehalose synthase, compl... 42 1.3
39ref|XM_550600.1| Oryza sativa (japonica cultivar-group), mRNA 40 5.2
40gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete se... 40 5.2
41gb|AC147054.4| Pan troglodytes BAC clone RP43-145A1 from 7, comp... 40 5.2
42gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome... 40 5.2
43ref|NM_001032745.1| Takifugu rubripes BAW protein (BAW), mRNA 40 5.2
44gb|AC125047.5| Mus musculus BAC clone RP23-354G14 from chromosom... 40 5.2
45ref|XM_783011.1| PREDICTED: Strongylocentrotus purpuratus simila... 40 5.2
46ref|XM_504976.1| Yarrowia lipolytica CLIB122, YALI0F04059g predi... 40 5.2
47gb|CP000089.1| Dechloromonas aromatica RCB, complete genome 40 5.2
48emb|CR555306.1| Azoarcus sp. EbN1 complete genome 40 5.2
49dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete ... 40 5.2
50gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome 40 5.2
51dbj|AK037696.1| Mus musculus 16 days neonate thymus cDNA, RIKEN ... 40 5.2
52dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
53gb|AC009111.8| Homo sapiens chromosome 16 clone RP11-468D1, comp... 40 5.2
54gb|AC010546.10| Homo sapiens chromosome 16 clone RP11-50O21, com... 40 5.2
55gb|AC007009.2|AC007009 Homo sapiens BAC clone RP11-560C1 from 7p... 40 5.2
56dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
57dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome 40 5.2
58dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 5.2
59dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
60gb|AE005000.1| Halobacterium sp. NRC-1 section 31 of 170 of the ... 40 5.2
61dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic D... 40 5.2
62emb|AL845314.10| Zebrafish DNA sequence from clone CH211-153N11 ... 40 5.2
63emb|BX000362.6| Zebrafish DNA sequence from clone DKEYP-93D12 in... 40 5.2
64gb|U95953.1|ZMU95953 Zea mays viviparous-14 (vp14) mRNA, complet... 40 5.2
65gb|AF153879.1|AF153879 Fugu rubripes BAW (BAW) mRNA, complete cds 40 5.2
66dbj|AP000857.4| Homo sapiens genomic DNA, chromosome 11q, clone:... 40 5.2
67emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB1... 40 5.2
68gb|AC125214.4| Mus musculus BAC clone RP23-84H24 from chromosome... 40 5.2 
>gb|AY838897.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid
            dioxygenase 1 (NCED1) mRNA, complete cds
          Length = 2119

 Score =  256 bits (129), Expect = 5e-65
 Identities = 192/213 (90%)
 Strand = Plus / Plus

                                                                        
Query: 4    ccgacgacgtcgaggggaacggcgacgaggacgacggctacgtggtgtgctacgtgcacg 63
            |||||||||||||||| |||||| ||||||| ||||| ||| ||||||||||||| ||||
Sbjct: 1806 ccgacgacgtcgagggcaacggcaacgaggatgacgggtacttggtgtgctacgtccacg 1865

                                                                        
Query: 64   acgagggcaccggcgacaaccggttcgtggtgatggacgcacagtcgcccgacctggaca 123
            |||||| ||||||||| ||||||||||||||||||||||| | |||||| |||||||| |
Sbjct: 1866 acgaggccaccggcgagaaccggttcgtggtgatggacgcgcggtcgccggacctggaga 1925

                                                                        
Query: 124  tcgtcgccgaggtgcagcttccatcccgcgtcccctacggcttccacggcctgttcgtca 183
            ||||||| ||||||||||| ||    |||||||||||||||||||| |||||||||||||
Sbjct: 1926 tcgtcgcggaggtgcagctgcccggacgcgtcccctacggcttccatggcctgttcgtca 1985

                                             
Query: 184  ggcaggccgagctccggtcacagcaccaatgat 216
             |||||||||||||| |||||||||||||||||
Sbjct: 1986 cgcaggccgagctccagtcacagcaccaatgat 2018
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>ref|XM_506928.1| PREDICTED Oryza sativa (japonica cultivar-group), P0724B10.24 mRNA
          Length = 2079

 Score =  256 bits (129), Expect = 5e-65
 Identities = 192/213 (90%)
 Strand = Plus / Plus

                                                                        
Query: 4    ccgacgacgtcgaggggaacggcgacgaggacgacggctacgtggtgtgctacgtgcacg 63
            |||||||||||||||| |||||| ||||||| ||||| ||| ||||||||||||| ||||
Sbjct: 1724 ccgacgacgtcgagggcaacggcaacgaggatgacgggtacttggtgtgctacgtccacg 1783

                                                                        
Query: 64   acgagggcaccggcgacaaccggttcgtggtgatggacgcacagtcgcccgacctggaca 123
            |||||| ||||||||| ||||||||||||||||||||||| | |||||| |||||||| |
Sbjct: 1784 acgaggccaccggcgagaaccggttcgtggtgatggacgcgcggtcgccggacctggaga 1843

                                                                        
Query: 124  tcgtcgccgaggtgcagcttccatcccgcgtcccctacggcttccacggcctgttcgtca 183
            ||||||| ||||||||||| ||    |||||||||||||||||||| |||||||||||||
Sbjct: 1844 tcgtcgcggaggtgcagctgcccggacgcgtcccctacggcttccatggcctgttcgtca 1903

                                             
Query: 184  ggcaggccgagctccggtcacagcaccaatgat 216
             |||||||||||||| |||||||||||||||||
Sbjct: 1904 cgcaggccgagctccagtcacagcaccaatgat 1936
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>ref|XM_467354.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2079

 Score =  256 bits (129), Expect = 5e-65
 Identities = 192/213 (90%)
 Strand = Plus / Plus

                                                                        
Query: 4    ccgacgacgtcgaggggaacggcgacgaggacgacggctacgtggtgtgctacgtgcacg 63
            |||||||||||||||| |||||| ||||||| ||||| ||| ||||||||||||| ||||
Sbjct: 1724 ccgacgacgtcgagggcaacggcaacgaggatgacgggtacttggtgtgctacgtccacg 1783

                                                                        
Query: 64   acgagggcaccggcgacaaccggttcgtggtgatggacgcacagtcgcccgacctggaca 123
            |||||| ||||||||| ||||||||||||||||||||||| | |||||| |||||||| |
Sbjct: 1784 acgaggccaccggcgagaaccggttcgtggtgatggacgcgcggtcgccggacctggaga 1843

                                                                        
Query: 124  tcgtcgccgaggtgcagcttccatcccgcgtcccctacggcttccacggcctgttcgtca 183
            ||||||| ||||||||||| ||    |||||||||||||||||||| |||||||||||||
Sbjct: 1844 tcgtcgcggaggtgcagctgcccggacgcgtcccctacggcttccatggcctgttcgtca 1903

                                             
Query: 184  ggcaggccgagctccggtcacagcaccaatgat 216
             |||||||||||||| |||||||||||||||||
Sbjct: 1904 cgcaggccgagctccagtcacagcaccaatgat 1936
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>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score =  256 bits (129), Expect = 5e-65
 Identities = 192/213 (90%)
 Strand = Plus / Minus

                                                                            
Query: 4        ccgacgacgtcgaggggaacggcgacgaggacgacggctacgtggtgtgctacgtgcacg 63
                |||||||||||||||| |||||| ||||||| ||||| ||| ||||||||||||| ||||
Sbjct: 29044947 ccgacgacgtcgagggcaacggcaacgaggatgacgggtacttggtgtgctacgtccacg 29044888

                                                                            
Query: 64       acgagggcaccggcgacaaccggttcgtggtgatggacgcacagtcgcccgacctggaca 123
                |||||| ||||||||| ||||||||||||||||||||||| | |||||| |||||||| |
Sbjct: 29044887 acgaggccaccggcgagaaccggttcgtggtgatggacgcgcggtcgccggacctggaga 29044828

                                                                            
Query: 124      tcgtcgccgaggtgcagcttccatcccgcgtcccctacggcttccacggcctgttcgtca 183
                ||||||| ||||||||||| ||    |||||||||||||||||||| |||||||||||||
Sbjct: 29044827 tcgtcgcggaggtgcagctgcccggacgcgtcccctacggcttccatggcctgttcgtca 29044768

                                                 
Query: 184      ggcaggccgagctccggtcacagcaccaatgat 216
                 |||||||||||||| |||||||||||||||||
Sbjct: 29044767 cgcaggccgagctccagtcacagcaccaatgat 29044735



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 26       cgacgaggacgacggctacg 45
                ||||||||||||||||||||
Sbjct: 32012068 cgacgaggacgacggctacg 32012087
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>dbj|AP005825.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC
             clone:P0724B10
          Length = 169143

 Score =  256 bits (129), Expect = 5e-65
 Identities = 192/213 (90%)
 Strand = Plus / Minus

                                                                         
Query: 4     ccgacgacgtcgaggggaacggcgacgaggacgacggctacgtggtgtgctacgtgcacg 63
             |||||||||||||||| |||||| ||||||| ||||| ||| ||||||||||||| ||||
Sbjct: 91112 ccgacgacgtcgagggcaacggcaacgaggatgacgggtacttggtgtgctacgtccacg 91053

                                                                         
Query: 64    acgagggcaccggcgacaaccggttcgtggtgatggacgcacagtcgcccgacctggaca 123
             |||||| ||||||||| ||||||||||||||||||||||| | |||||| |||||||| |
Sbjct: 91052 acgaggccaccggcgagaaccggttcgtggtgatggacgcgcggtcgccggacctggaga 90993

                                                                         
Query: 124   tcgtcgccgaggtgcagcttccatcccgcgtcccctacggcttccacggcctgttcgtca 183
             ||||||| ||||||||||| ||    |||||||||||||||||||| |||||||||||||
Sbjct: 90992 tcgtcgcggaggtgcagctgcccggacgcgtcccctacggcttccatggcctgttcgtca 90933

                                              
Query: 184   ggcaggccgagctccggtcacagcaccaatgat 216
              |||||||||||||| |||||||||||||||||
Sbjct: 90932 cgcaggccgagctccagtcacagcaccaatgat 90900
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>dbj|AK099580.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013040C20, full
            insert sequence
          Length = 2080

 Score =  256 bits (129), Expect = 5e-65
 Identities = 192/213 (90%)
 Strand = Plus / Plus

                                                                        
Query: 4    ccgacgacgtcgaggggaacggcgacgaggacgacggctacgtggtgtgctacgtgcacg 63
            |||||||||||||||| |||||| ||||||| ||||| ||| ||||||||||||| ||||
Sbjct: 1724 ccgacgacgtcgagggcaacggcaacgaggatgacgggtacttggtgtgctacgtccacg 1783

                                                                        
Query: 64   acgagggcaccggcgacaaccggttcgtggtgatggacgcacagtcgcccgacctggaca 123
            |||||| ||||||||| ||||||||||||||||||||||| | |||||| |||||||| |
Sbjct: 1784 acgaggccaccggcgagaaccggttcgtggtgatggacgcgcggtcgccggacctggaga 1843

                                                                        
Query: 124  tcgtcgccgaggtgcagcttccatcccgcgtcccctacggcttccacggcctgttcgtca 183
            ||||||| ||||||||||| ||    |||||||||||||||||||| |||||||||||||
Sbjct: 1844 tcgtcgcggaggtgcagctgcccggacgcgtcccctacggcttccatggcctgttcgtca 1903

                                             
Query: 184  ggcaggccgagctccggtcacagcaccaatgat 216
             |||||||||||||| |||||||||||||||||
Sbjct: 1904 cgcaggccgagctccagtcacagcaccaatgat 1936
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>dbj|AK064824.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F03, full
            insert sequence
          Length = 2080

 Score =  256 bits (129), Expect = 5e-65
 Identities = 192/213 (90%)
 Strand = Plus / Plus

                                                                        
Query: 4    ccgacgacgtcgaggggaacggcgacgaggacgacggctacgtggtgtgctacgtgcacg 63
            |||||||||||||||| |||||| ||||||| ||||| ||| ||||||||||||| ||||
Sbjct: 1724 ccgacgacgtcgagggcaacggcaacgaggatgacgggtacttggtgtgctacgtccacg 1783

                                                                        
Query: 64   acgagggcaccggcgacaaccggttcgtggtgatggacgcacagtcgcccgacctggaca 123
            |||||| ||||||||| ||||||||||||||||||||||| | |||||| |||||||| |
Sbjct: 1784 acgaggccaccggcgagaaccggttcgtggtgatggacgcgcggtcgccggacctggaga 1843

                                                                        
Query: 124  tcgtcgccgaggtgcagcttccatcccgcgtcccctacggcttccacggcctgttcgtca 183
            ||||||| ||||||||||| ||    |||||||||||||||||||| |||||||||||||
Sbjct: 1844 tcgtcgcggaggtgcagctgcccggacgcgtcccctacggcttccatggcctgttcgtca 1903

                                             
Query: 184  ggcaggccgagctccggtcacagcaccaatgat 216
             |||||||||||||| |||||||||||||||||
Sbjct: 1904 cgcaggccgagctccagtcacagcaccaatgat 1936
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>gb|AY838901.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid
            dioxygenase 5 (NCED5) mRNA, complete cds
          Length = 2041

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                    
Query: 150  cgcgtcccctacggcttccacggc 173
            ||||||||||||||||||||||||
Sbjct: 1878 cgcgtcccctacggcttccacggc 1901
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>gb|AY838900.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid
            dioxygenase 4 (NCED4) mRNA, complete cds
          Length = 1949

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 30   gaggacgacggctacgtggtgtgctacgtgcacgacgagg 69
            |||||||||||| ||||| |||||| ||| ||||||||||
Sbjct: 1667 gaggacgacggccacgtgctgtgcttcgtccacgacgagg 1706
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>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete
                sequence
          Length = 27566993

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 150      cgcgtcccctacggcttccacggc 173
                ||||||||||||||||||||||||
Sbjct: 26303663 cgcgtcccctacggcttccacggc 26303686
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                       
Query: 30      gaggacgacggctacgtggtgtgctacgtgcacgacgagg 69
               |||||||||||| ||||| |||||| ||| ||||||||||
Sbjct: 2904523 gaggacgacggccacgtgctgtgcttcgtccacgacgagg 2904562
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>dbj|AP005632.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OSJNBb0050B07
          Length = 142134

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                     
Query: 30    gaggacgacggctacgtggtgtgctacgtgcacgacgagg 69
             |||||||||||| ||||| |||||| ||| ||||||||||
Sbjct: 74810 gaggacgacggccacgtgctgtgcttcgtccacgacgagg 74849
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>dbj|AK119780.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-173-D12, full
            insert sequence
          Length = 2144

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 36/40 (90%)
 Strand = Plus / Plus

                                                    
Query: 30   gaggacgacggctacgtggtgtgctacgtgcacgacgagg 69
            |||||||||||| ||||| |||||| ||| ||||||||||
Sbjct: 1686 gaggacgacggccacgtgctgtgcttcgtccacgacgagg 1725
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>dbj|AK107649.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-131-F10, full
           insert sequence
          Length = 1475

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                   
Query: 150 cgcgtcccctacggcttccacggc 173
           ||||||||||||||||||||||||
Sbjct: 790 cgcgtcccctacggcttccacggc 813
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>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence
          Length = 27492551

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                        
Query: 150      cgcgtcccctacggcttccacggc 173
                ||||||||||||||||||||||||
Sbjct: 26231839 cgcgtcccctacggcttccacggc 26231862
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>emb|AL731885.4|CNS08C8P Oryza sativa chromosome 12, . BAC OSJNBb0016A10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 133978

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 150   cgcgtcccctacggcttccacggc 173
             ||||||||||||||||||||||||
Sbjct: 67647 cgcgtcccctacggcttccacggc 67670
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>emb|AL845347.4|CNS08CB9 Oryza sativa chromosome 12, . BAC OSJNBb0101I10 of library OSJNBb from
             chromosome 12 of cultivar Nipponbare of ssp. japonica of
             Oryza sativa (rice), complete sequence
          Length = 131689

 Score = 48.1 bits (24), Expect = 0.021
 Identities = 24/24 (100%)
 Strand = Plus / Plus

                                     
Query: 150   cgcgtcccctacggcttccacggc 173
             ||||||||||||||||||||||||
Sbjct: 17942 cgcgtcccctacggcttccacggc 17965
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>gb|AY838899.1| Oryza sativa (japonica cultivar-group) 9-cis-epoxycarotenoid
            dioxygenase 3 (NCED3) mRNA, complete cds
          Length = 2060

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 135  gtgcagcttccatcccgcgtcccctacggcttccacggc 173
            |||||||| || |||||||| || |||||||||||||||
Sbjct: 1920 gtgcagctgccgtcccgcgtgccgtacggcttccacggc 1958
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>emb|AL713930.5|CNS07YP7 Oryza sativa chromosome 3, . BAC OSJNBa0007L18 of library OSJNBa from
              chromosome 3 of cultivar Nipponbare of ssp. japonica of
              Oryza sativa (rice), complete sequence
          Length = 183327

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                     
Query: 135    gtgcagcttccatcccgcgtcccctacggcttccacggc 173
              |||||||| || |||||||| || |||||||||||||||
Sbjct: 144721 gtgcagctgccgtcccgcgtgccgtacggcttccacggc 144759
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>gb|DQ145930.1| Hordeum vulgare subsp. vulgare 9-cis-epoxycarotenoid dioxygenase 1
            mRNA, complete cds
          Length = 2376

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                   
Query: 135  gtgcagcttccatcccgcgtcccctacggcttccacggc 173
            |||||||| || ||||| |||||||| ||||||||||||
Sbjct: 1735 gtgcagctgccgtcccgggtcccctatggcttccacggc 1773



 Score = 46.1 bits (23), Expect = 0.084
 Identities = 41/47 (87%)
 Strand = Plus / Plus

                                                           
Query: 23   cggcgacgaggacgacggctacgtggtgtgctacgtgcacgacgagg 69
            ||||| ||||||||||||||||||| | | || ||||| ||||||||
Sbjct: 1629 cggcgccgaggacgacggctacgtgctctccttcgtgcgcgacgagg 1675
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score = 46.1 bits (23), Expect = 0.084
 Identities = 35/39 (89%)
 Strand = Plus / Plus

                                                       
Query: 135      gtgcagcttccatcccgcgtcccctacggcttccacggc 173
                |||||||| || |||||||| || |||||||||||||||
Sbjct: 24766032 gtgcagctgccgtcccgcgtgccgtacggcttccacggc 24766070
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>emb|X77865.1|SGKSACPG S.griseus genes for ketosynthase, acyl carrier protein,
            ketoreductase, cyclase and dehydrase
          Length = 5364

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                          
Query: 5    cgacgacgtcgaggggaacggcgacgagga 34
            |||| ||||||||| |||||||||||||||
Sbjct: 4176 cgaccacgtcgaggagaacggcgacgagga 4205
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>emb|BX842649.1| Bdellovibrio bacteriovorus complete genome, strain HD100; segment 4/11
          Length = 349697

 Score = 44.1 bits (22), Expect = 0.33
 Identities = 25/26 (96%)
 Strand = Plus / Minus

                                        
Query: 220    cagattcagatacaccagcacgttct 245
              ||||| ||||||||||||||||||||
Sbjct: 280513 cagatacagatacaccagcacgttct 280488
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>ref|NM_111838.2| Arabidopsis thaliana unknown protein AT3G10030 mRNA, complete cds
          Length = 1990

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 19  ggaacggcgacgaggacgacg 39
           |||||||||||||||||||||
Sbjct: 272 ggaacggcgacgaggacgacg 292
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>gb|AC010927.5|ATAC010927 Arabidopsis thaliana chromosome III BAC T22K18 genomic sequence,
             complete sequence
          Length = 96232

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 19    ggaacggcgacgaggacgacg 39
             |||||||||||||||||||||
Sbjct: 48863 ggaacggcgacgaggacgacg 48883
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>gb|AC128676.2| Homo sapiens BAC clone RP11-65G11 from UL, complete sequence
          Length = 159143

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 360   agaaagaaacatttgtgaaac 380
             |||||||||||||||||||||
Sbjct: 65668 agaaagaaacatttgtgaaac 65648
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>emb|BX640443.1| Bordetella bronchiseptica strain RB50, complete genome; segment 7/16
          Length = 346274

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 109   cgcccgacctggacatcgtcgccga 133
             |||||||||||||||||| ||||||
Sbjct: 48138 cgcccgacctggacatcgacgccga 48162
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>emb|BX640430.1| Bordetella parapertussis strain 12822, complete genome; segment 8/14
          Length = 348014

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 109    cgcccgacctggacatcgtcgccga 133
              |||||||||||||||||| ||||||
Sbjct: 312016 cgcccgacctggacatcgacgccga 312040
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>emb|BX640419.1| Bordetella pertussis strain Tohama I, complete genome; segment 9/12
          Length = 349672

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                       
Query: 109    cgcccgacctggacatcgtcgccga 133
              |||||||||||||||||| ||||||
Sbjct: 172229 cgcccgacctggacatcgacgccga 172205
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>emb|AL939120.1|SCO939120 Streptomyces coelicolor A3(2) complete genome; segment 17/29
          Length = 248550

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 19    ggaacggcgacgaggacgacg 39
             |||||||||||||||||||||
Sbjct: 32524 ggaacggcgacgaggacgacg 32504
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>gb|AY120687.1| Arabidopsis thaliana AT3g10030/T22K18_15 mRNA, complete cds
          Length = 1629

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 19  ggaacggcgacgaggacgacg 39
           |||||||||||||||||||||
Sbjct: 158 ggaacggcgacgaggacgacg 178
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>gb|AF375431.1| Arabidopsis thaliana AT3g10030/T22K18_15 mRNA, complete cds
          Length = 1983

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 19  ggaacggcgacgaggacgacg 39
           |||||||||||||||||||||
Sbjct: 272 ggaacggcgacgaggacgacg 292
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>gb|AC151535.2| Mus musculus BAC clone RP23-213M8 from chromosome 7, complete sequence
          Length = 216527

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 341   tagcatttacatgtttacaagaaag 365
             |||||||||||||||||||| ||||
Sbjct: 57418 tagcatttacatgtttacaataaag 57442
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 72      accggcgacaaccggttcgtg 92
               |||||||||||||||||||||
Sbjct: 1468883 accggcgacaaccggttcgtg 1468903
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>gb|AC019340.6| Homo sapiens BAC clone RP11-715L17 from 7, complete sequence
          Length = 190137

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 360    agaaagaaacatttgtgaaac 380
              |||||||||||||||||||||
Sbjct: 184468 agaaagaaacatttgtgaaac 184488
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>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                        
Query: 117     ctggacatcgtcgccgaggtgcagc 141
               |||||||| ||||||||||||||||
Sbjct: 3236682 ctggacatggtcgccgaggtgcagc 3236706
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>gb|AC151531.3| Mus musculus BAC clone RP24-387D22 from chromosome 7, complete sequence
          Length = 213801

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 341    tagcatttacatgtttacaagaaag 365
              |||||||||||||||||||| ||||
Sbjct: 163709 tagcatttacatgtttacaataaag 163733
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>dbj|D78198.1| Pimelobacter sp. DNA for trehalose synthase, complete cds
          Length = 2304

 Score = 42.1 bits (21), Expect = 1.3
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 56  cgtgcacgacgagggcaccggcgac 80
           |||||||||||||| ||||||||||
Sbjct: 228 cgtgcacgacgaggtcaccggcgac 252
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>ref|XM_550600.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 276

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 22  acggcgacgaggacgacggc 41
           ||||||||||||||||||||
Sbjct: 191 acggcgacgaggacgacggc 210
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>gb|AF488413.1| Oryza sativa chromosome 6 BAC 134P10, complete sequence
          Length = 136866

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    acggcgacgaggacgacggc 41
             ||||||||||||||||||||
Sbjct: 39706 acggcgacgaggacgacggc 39687
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>gb|AC147054.4| Pan troglodytes BAC clone RP43-145A1 from 7, complete sequence
          Length = 153627

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 319    gagaaataggtcatctcatgtgta 342
              |||||||||| |||||||||||||
Sbjct: 132358 gagaaataggccatctcatgtgta 132335
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>gb|AC139758.3| Mus musculus BAC clone RP23-367E7 from chromosome 14, complete sequence
          Length = 210969

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 357   acaagaaagaaacatttgtgaaac 380
             ||||||| ||||||||||||||||
Sbjct: 33711 acaagaatgaaacatttgtgaaac 33734
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>ref|NM_001032745.1| Takifugu rubripes BAW protein (BAW), mRNA
          Length = 1786

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 6    gacgacgtcgaggggaacggcgacgaggacgacggc 41
            ||||||||||||||||||| || ||| || ||||||
Sbjct: 1114 gacgacgtcgaggggaacgccggcgaagaagacggc 1149
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>gb|AC125047.5| Mus musculus BAC clone RP23-354G14 from chromosome 3, complete sequence
          Length = 200566

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 354    tttacaagaaagaaacattt 373
              ||||||||||||||||||||
Sbjct: 195340 tttacaagaaagaaacattt 195359
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>ref|XM_783011.1| PREDICTED: Strongylocentrotus purpuratus similar to Nephrin
           precursor (Renal glomerulus-specific cell adhesion
           receptor) (LOC583084), partial mRNA
          Length = 607

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 328 gtcatctcatgtgtagcatt 347
           ||||||||||||||||||||
Sbjct: 28  gtcatctcatgtgtagcatt 47
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>ref|XM_504976.1| Yarrowia lipolytica CLIB122, YALI0F04059g predicted mRNA
          Length = 1386

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 22  acggcgacgaggacgacggctacg 45
           |||||||||||||||| |||||||
Sbjct: 779 acggcgacgaggacgatggctacg 802
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>gb|CP000089.1| Dechloromonas aromatica RCB, complete genome
          Length = 4501104

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 167     ccacggcctgttcgtcaggc 186
               ||||||||||||||||||||
Sbjct: 2409468 ccacggcctgttcgtcaggc 2409487



 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 158     ctacggcttccacggcctgt 177
               ||||||||||||||||||||
Sbjct: 1066454 ctacggcttccacggcctgt 1066435
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>emb|CR555306.1| Azoarcus sp. EbN1 complete genome
          Length = 4296230

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 23      cggcgacgaggacgacggctacgtggtg 50
               |||||||||||| |||||||||| ||||
Sbjct: 4078546 cggcgacgaggaggacggctacgaggtg 4078519
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>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome
          Length = 4967148

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 158     ctacggcttccacggcctgt 177
               ||||||||||||||||||||
Sbjct: 2737009 ctacggcttccacggcctgt 2736990
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>gb|AF232689.2| Rat cytomegalovirus Maastricht, complete genome
          Length = 230138

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 21    aacggcgacgaggacgacgg 40
             ||||||||||||||||||||
Sbjct: 70878 aacggcgacgaggacgacgg 70859
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>dbj|AK037696.1| Mus musculus 16 days neonate thymus cDNA, RIKEN full-length
           enriched library, clone:A130038J17
           product:unclassifiable, full insert sequence
          Length = 2737

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 357 acaagaaagaaacatttgtgaaac 380
           ||||||| ||||||||||||||||
Sbjct: 286 acaagaatgaaacatttgtgaaac 309
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>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 22      acggcgacgaggacgacggc 41
               ||||||||||||||||||||
Sbjct: 1719491 acggcgacgaggacgacggc 1719472
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>gb|AC009111.8| Homo sapiens chromosome 16 clone RP11-468D1, complete sequence
          Length = 153456

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 308   catacacataggagaaatag 327
             ||||||||||||||||||||
Sbjct: 55831 catacacataggagaaatag 55812
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>gb|AC010546.10| Homo sapiens chromosome 16 clone RP11-50O21, complete sequence
          Length = 181955

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 308   catacacataggagaaatag 327
             ||||||||||||||||||||
Sbjct: 26128 catacacataggagaaatag 26147
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>gb|AC007009.2|AC007009 Homo sapiens BAC clone RP11-560C1 from 7p22-p21, complete sequence
          Length = 152523

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 319   gagaaataggtcatctcatgtgta 342
             |||||||||| |||||||||||||
Sbjct: 67501 gagaaataggccatctcatgtgta 67478
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>dbj|AP000559.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0493C11
          Length = 143113

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 22     acggcgacgaggacgacggc 41
              ||||||||||||||||||||
Sbjct: 122662 acggcgacgaggacgacggc 122643
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>dbj|BA000045.2| Gloeobacter violaceus PCC 7421 DNA, complete genome
          Length = 4659019

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 113     cgacctggacatcgtcgccg 132
               ||||||||||||||||||||
Sbjct: 4418147 cgacctggacatcgtcgccg 4418128
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 113    cgacctggacatcgtcgccg 132
              ||||||||||||||||||||
Sbjct: 576648 cgacctggacatcgtcgccg 576629
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>dbj|AP002542.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0679C08
          Length = 156266

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 22    acggcgacgaggacgacggc 41
             ||||||||||||||||||||
Sbjct: 44640 acggcgacgaggacgacggc 44621
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>gb|AE005000.1| Halobacterium sp. NRC-1 section 31 of 170 of the complete genome
          Length = 11487

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 22   acggcgacgaggacgacggc 41
            ||||||||||||||||||||
Sbjct: 5971 acggcgacgaggacgacggc 5990
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>dbj|AP004159.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:OJ1175_B01
          Length = 96191

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 26    cgacgaggacgacggctacg 45
             ||||||||||||||||||||
Sbjct: 32443 cgacgaggacgacggctacg 32462
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>emb|AL845314.10| Zebrafish DNA sequence from clone CH211-153N11 in linkage group 20,
              complete sequence
          Length = 179498

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 357    acaagaaagaaacatttgtg 376
              ||||||||||||||||||||
Sbjct: 144400 acaagaaagaaacatttgtg 144419
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>emb|BX000362.6| Zebrafish DNA sequence from clone DKEYP-93D12 in linkage group 20,
             complete sequence
          Length = 205186

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   acaagaaagaaacatttgtg 376
             ||||||||||||||||||||
Sbjct: 77248 acaagaaagaaacatttgtg 77267
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>gb|U95953.1|ZMU95953 Zea mays viviparous-14 (vp14) mRNA, complete cds
          Length = 2498

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 138  cagcttccatcccgcgtcccctacggcttccacggc 173
            ||||| || |||||||| |||| |||||||||||||
Sbjct: 1837 cagctgccgtcccgcgtgcccttcggcttccacggc 1872
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>gb|AF153879.1|AF153879 Fugu rubripes BAW (BAW) mRNA, complete cds
          Length = 1786

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 32/36 (88%)
 Strand = Plus / Plus

                                                
Query: 6    gacgacgtcgaggggaacggcgacgaggacgacggc 41
            ||||||||||||||||||| || ||| || ||||||
Sbjct: 1114 gacgacgtcgaggggaacgccggcgaagaagacggc 1149
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>dbj|AP000857.4| Homo sapiens genomic DNA, chromosome 11q, clone:CMB9-103D18, complete
             sequences
          Length = 144484

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 354   tttacaagaaagaaacattt 373
             ||||||||||||||||||||
Sbjct: 45063 tttacaagaaagaaacattt 45044
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>emb|CR382132.1| Yarrowia lipolytica chromosome F of strain CLIB122 of Yarrowia lipolytica
          Length = 4003362

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 22     acggcgacgaggacgacggctacg 45
              |||||||||||||||| |||||||
Sbjct: 606823 acggcgacgaggacgatggctacg 606800
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>gb|AC125214.4| Mus musculus BAC clone RP23-84H24 from chromosome 3, complete sequence
          Length = 214943

 Score = 40.1 bits (20), Expect = 5.2
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 354    tttacaagaaagaaacattt 373
              ||||||||||||||||||||
Sbjct: 163101 tttacaagaaagaaacattt 163082


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 2,760,933
Number of Sequences: 3902068
Number of extensions: 2760933
Number of successful extensions: 64945
Number of sequences better than 10.0: 68
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 64120
Number of HSP's gapped (non-prelim): 818
length of query: 387
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 365
effective length of database: 17,147,199,772
effective search space: 6258727916780
effective search space used: 6258727916780
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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