ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal32e17 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | SELT_ARATH (Q9STZ2) SelT-like protein precursor | 206 | 6e-53 | 2 | HSP6_HETGL (Q9BN19) Putative esophageal gland cell secretory pro... | 98 | 2e-20 | 3 | SELT2_CAEEL (Q19892) Putative selT-like protein F28H7.4 precursor | 80 | 4e-15 | 4 | SELT1_CAEEL (Q9U3N5) Putative selT-like protein C35C5.3 precursor | 73 | 6e-13 | 5 | SELT_DROME (Q9VMV6) SelT-like protein precursor | 70 | 5e-12 | 6 | SELT_MOUSE (P62342) Selenoprotein T precursor | 59 | 9e-09 | 7 | SELT_HUMAN (P62341) Selenoprotein T precursor | 59 | 9e-09 | 8 | SEPW1_PIG (Q95KL4) Selenoprotein W | 34 | 0.33 | 9 | SEPW1_MACMU (P63303) Selenoprotein W | 32 | 1.6 | 10 | SEPW1_HUMAN (P63302) Selenoprotein W | 32 | 1.6 | 11 | Y903_MYCBO (P64736) Hypothetical protein Mb0903c | 32 | 2.1 | 12 | Y879_MYCTU (P64735) Hypothetical protein Rv0879c/MT0902 | 32 | 2.1 | 13 | SEPW1_RAT (P63301) Selenoprotein W | 30 | 6.2 | 14 | SEPW1_MOUSE (P63300) Selenoprotein W | 30 | 6.2 |
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>SELT_ARATH (Q9STZ2) SelT-like protein precursor| Length = 209 Score = 206 bits (523), Expect = 6e-53 Identities = 100/154 (64%), Positives = 120/154 (77%), Gaps = 1/154 (0%) Frame = +3 Query: 183 GAGFGTTVELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQ 362 G G+G TVE+ FC SCSYKG A++MK+MLE+ FPG++V L NYP PKR+L+K++PV Q Sbjct: 52 GVGYGNTVEINFCISCSYKGTAVSMKKMLESVFPGLDVVLANYPAPAPKRILAKVVPVAQ 111 Query: 363 VGAIATIMAGDQIFPRLGITPPPLFY-SLRANRFGTMATIWLFGNFAQSFLQSSGAFEVY 539 VG I IM G+QIFP +GI PP +Y SLRANRFG+MA+ WL GNF QSFLQSSGAFEV Sbjct: 112 VGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLLGNFLQSFLQSSGAFEVS 171 Query: 540 CNGDLVFSKLAEQRFPSEFELRDLIGSRLPSSPF 641 CNG+LVFSKL E RFP E ELRDLI + + PF Sbjct: 172 CNGELVFSKLKEGRFPGEIELRDLISGTM-TKPF 204
>HSP6_HETGL (Q9BN19) Putative esophageal gland cell secretory protein 6| precursor Length = 244 Score = 97.8 bits (242), Expect = 2e-20 Identities = 47/141 (33%), Positives = 77/141 (54%) Frame = +3 Query: 204 VELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGAIATI 383 V+ FC SC Y+ ++L +PGI++ NYPP + V ++++ ++++ I + Sbjct: 83 VKFSFCVSCGYRQAYEQFAQILREKYPGIDIHGENYPPGILRTVGAQVIGMVKIALIVCV 142 Query: 384 MAGDQIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNGDLVFS 563 ++G FP LG+ P F + +NR ++LF N + LQS+GAFE+Y + ++S Sbjct: 143 VSGRSPFPTLGLETPTFFQWMLSNRLSAALMLFLFSNAIEGMLQSTGAFEIYIESERIWS 202 Query: 564 KLAEQRFPSEFELRDLIGSRL 626 KL R PS EL I S L Sbjct: 203 KLESGRVPSPPELFQAIDSHL 223
>SELT2_CAEEL (Q19892) Putative selT-like protein F28H7.4 precursor| Length = 232 Score = 80.5 bits (197), Expect = 4e-15 Identities = 41/137 (29%), Positives = 73/137 (53%) Frame = +3 Query: 216 FCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGAIATIMAGD 395 F SC YK + +PG+ + N+ P F K L++I+ V ++G IA ++ G Sbjct: 92 FSVSCGYKQAFNQFYEFAKEKYPGLVIEGGNFSPDFWKGCLAQIVGVAKIGLIAIVITGS 151 Query: 396 QIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNGDLVFSKLAE 575 F +G P + + NRF +++ GN +S L S+GAFE++ ++SK+++ Sbjct: 152 NPFEYIGFGYPQILQTAHYNRFSYSLLVFMIGNLFESTLSSTGAFEIFLGDKQIWSKISK 211 Query: 576 QRFPSEFELRDLIGSRL 626 +R P++ E +LI +L Sbjct: 212 ERVPTQEEFLNLIDLQL 228
>SELT1_CAEEL (Q9U3N5) Putative selT-like protein C35C5.3 precursor| Length = 247 Score = 73.2 bits (178), Expect = 6e-13 Identities = 35/142 (24%), Positives = 68/142 (47%) Frame = +3 Query: 201 TVELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGAIAT 380 T+ + +C SC YK + +P + + N+ P K +++ + +++ + Sbjct: 86 TLRIFYCVSCGYKQAFDQFTTFAKEKYPNMPIEGANFAPVLWKAYVAQALSFVKMAVLVL 145 Query: 381 IMAGDQIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNGDLVF 560 ++ G F R G+ P + N+ + +++ GN + L S+GAFEVY + ++ Sbjct: 146 VLGGINPFERFGLGYPQILQHAHGNKMSSCMLVFMLGNLVEQSLISTGAFEVYLGNEQIW 205 Query: 561 SKLAEQRFPSEFELRDLIGSRL 626 SK+ R PS E LI ++L Sbjct: 206 SKIESGRVPSPQEFMQLIDAQL 227
>SELT_DROME (Q9VMV6) SelT-like protein precursor| Length = 198 Score = 70.1 bits (170), Expect = 5e-12 Identities = 45/148 (30%), Positives = 71/148 (47%) Frame = +3 Query: 183 GAGFGTTVELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQ 362 G T+ +C SC Y+ +L +P I V NY P LSK++ ++ Sbjct: 37 GQNIAPTMTFLYCYSCGYRKAFEDYVGLLGEKYPQIQVNGGNYDPPGLNYYLSKMIFALK 96 Query: 363 VGAIATIMAGDQIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYC 542 + I ++++ F LG+ P + ++AN+ I+ GN ++ L SSGAFE+ Sbjct: 97 IIIIVSVVSAVSPFTFLGLNTPSWWSHMQANKIYACMMIFFLGNMLEAQLISSGAFEITL 156 Query: 543 NGDLVFSKLAEQRFPSEFELRDLIGSRL 626 N V+SKL RFPS L +I + L Sbjct: 157 NDVPVWSKLQTGRFPSPEVLFQIIDNHL 184
>SELT_MOUSE (P62342) Selenoprotein T precursor| Length = 195 Score = 59.3 bits (142), Expect = 9e-09 Identities = 35/144 (24%), Positives = 65/144 (45%) Frame = +3 Query: 195 GTTVELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGAI 374 G ++ Q C SC Y+ R++ +P I + NY P R ++ + V ++ I Sbjct: 38 GPLLKFQICVSCGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLI 97 Query: 375 ATIMAGDQIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNGDL 554 I+ G F G+ P ++ + N+ ++ N ++ S+GAFE+ N Sbjct: 98 GLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVP 157 Query: 555 VFSKLAEQRFPSEFELRDLIGSRL 626 V+SKL PS +L ++ + + Sbjct: 158 VWSKLESGHLPSMQQLVQILDNEM 181
>SELT_HUMAN (P62341) Selenoprotein T precursor| Length = 195 Score = 59.3 bits (142), Expect = 9e-09 Identities = 35/144 (24%), Positives = 65/144 (45%) Frame = +3 Query: 195 GTTVELQFCASCSYKGNAMTMKRMLETSFPGINVFLHNYPPAFPKRVLSKIMPVIQVGAI 374 G ++ Q C SC Y+ R++ +P I + NY P R ++ + V ++ I Sbjct: 38 GPLLKFQICVSCGYRRVFEEYMRVISQRYPDIRIEGENYLPQPIYRHIASFLSVFKLVLI 97 Query: 375 ATIMAGDQIFPRLGITPPPLFYSLRANRFGTMATIWLFGNFAQSFLQSSGAFEVYCNGDL 554 I+ G F G+ P ++ + N+ ++ N ++ S+GAFE+ N Sbjct: 98 GLIIVGKDPFAFFGMQAPSIWQWGQENKVYACMMVFFLSNMIENQCMSTGAFEITLNDVP 157 Query: 555 VFSKLAEQRFPSEFELRDLIGSRL 626 V+SKL PS +L ++ + + Sbjct: 158 VWSKLESGHLPSMQQLVQILDNEM 181
>SEPW1_PIG (Q95KL4) Selenoprotein W| Length = 86 Score = 34.3 bits (77), Expect = 0.33 Identities = 12/31 (38%), Positives = 18/31 (58%) Frame = +3 Query: 195 GTTVELQFCASCSYKGNAMTMKRMLETSFPG 287 G V + +C +C YK + +K+ LE FPG Sbjct: 1 GVAVRVVYCGACGYKSKYLQLKKKLEDEFPG 31
>SEPW1_MACMU (P63303) Selenoprotein W| Length = 86 Score = 32.0 bits (71), Expect = 1.6 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +3 Query: 204 VELQFCASCSYKGNAMTMKRMLETSFPG 287 V + +C +C YK + +K+ LE FPG Sbjct: 4 VRVVYCGACGYKSKYLQLKKKLEDEFPG 31
>SEPW1_HUMAN (P63302) Selenoprotein W| Length = 86 Score = 32.0 bits (71), Expect = 1.6 Identities = 11/28 (39%), Positives = 17/28 (60%) Frame = +3 Query: 204 VELQFCASCSYKGNAMTMKRMLETSFPG 287 V + +C +C YK + +K+ LE FPG Sbjct: 4 VRVVYCGACGYKSKYLQLKKKLEDEFPG 31
>Y903_MYCBO (P64736) Hypothetical protein Mb0903c| Length = 91 Score = 31.6 bits (70), Expect = 2.1 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Frame = +3 Query: 312 PPAFPKRVLSKIMPVIQVGAIATIMAGDQIF--PRLGITPPPLFYSLRANRFGTMATIWL 485 PP P VL ++ PVI VGA+A ++A F P L P L GT +W Sbjct: 11 PPPLPP-VLLEVWPVIAVGALAWLVAAVAAFVVPGLASWRPVTVAGLATGLLGTTIFVWQ 69 Query: 486 FGNFAQSFLQSSGAFEVY 539 + + E Y Sbjct: 70 LAAARRGARGAQAGLETY 87
>Y879_MYCTU (P64735) Hypothetical protein Rv0879c/MT0902| Length = 91 Score = 31.6 bits (70), Expect = 2.1 Identities = 23/78 (29%), Positives = 31/78 (39%), Gaps = 2/78 (2%) Frame = +3 Query: 312 PPAFPKRVLSKIMPVIQVGAIATIMAGDQIF--PRLGITPPPLFYSLRANRFGTMATIWL 485 PP P VL ++ PVI VGA+A ++A F P L P L GT +W Sbjct: 11 PPPLPP-VLLEVWPVIAVGALAWLVAAVAAFVVPGLASWRPVTVAGLATGLLGTTIFVWQ 69 Query: 486 FGNFAQSFLQSSGAFEVY 539 + + E Y Sbjct: 70 LAAARRGARGAQAGLETY 87
>SEPW1_RAT (P63301) Selenoprotein W| Length = 87 Score = 30.0 bits (66), Expect = 6.2 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 Query: 204 VELQFCASCSYKGNAMTMKRMLETSFPG 287 V + +C +C YK + +K LE FPG Sbjct: 4 VRVVYCGACGYKPKYLQLKEKLEHEFPG 31
>SEPW1_MOUSE (P63300) Selenoprotein W| Length = 87 Score = 30.0 bits (66), Expect = 6.2 Identities = 11/28 (39%), Positives = 16/28 (57%) Frame = +3 Query: 204 VELQFCASCSYKGNAMTMKRMLETSFPG 287 V + +C +C YK + +K LE FPG Sbjct: 4 VRVVYCGACGYKPKYLQLKEKLEHEFPG 31 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 87,199,315 Number of Sequences: 219361 Number of extensions: 1839768 Number of successful extensions: 4792 Number of sequences better than 10.0: 14 Number of HSP's better than 10.0 without gapping: 4652 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4791 length of database: 80,573,946 effective HSP length: 108 effective length of database: 56,882,958 effective search space used: 6086476506 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
