ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal32e04
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_550208.1| Oryza sativa (japonica cultivar-group), mRNA 141 3e-30
2dbj|AK102322.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
3dbj|AK063812.1| Oryza sativa (japonica cultivar-group) cDNA clon... 141 3e-30
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
5dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
6dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic D... 100 1e-17
7dbj|AP006184.1| Sus scrofa CC chemokine receptor genes (CCR9, CX... 46 0.14
8gb|DQ369998.1| HIV-1 isolate 04ZASK172B1 from South Africa, comp... 44 0.54
9emb|AL162424.20| Human DNA sequence from clone RP11-498E2 on chr... 42 2.2
10gb|AC009522.11| Homo sapiens 12 BAC RP11-591N1 (Roswell Park Can... 42 2.2
11gb|AY085730.1| Arabidopsis thaliana clone 17437 mRNA, complete s... 42 2.2
12emb|AL953872.7| Zebrafish DNA sequence from clone CH211-235H23, ... 42 2.2
13gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 8.5
14gb|DQ058416.1| Rhizobium etli strain 8C-3 plasmid clone REB02, p... 40 8.5
15gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
16gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome... 40 8.5
17gb|AE008935.1| Agrobacterium tumefaciens str. C58 AT plasmid sec... 40 8.5
18gb|AE007883.1| Agrobacterium tumefaciens str. C58 plasmid AT, se... 40 8.5
19ref|XM_806090.1| Trypanosoma cruzi strain CL Brener Unc104-like ... 40 8.5
20gb|BC059305.1| Xenopus laevis hypothetical protein MGC68950, mRN... 40 8.5
21ref|XM_764361.1| Giardia lamblia ATCC 50803 hypothetical protein... 40 8.5
22dbj|AB187566.1| Murine leukemia virus Graffi GV-1.4 DNA, complet... 40 8.5
23dbj|AB187565.1| Murine leukemia virus Graffi GV-1.2 DNA, complet... 40 8.5
24gb|AC016994.8| Homo sapiens BAC clone RP11-19J8 from 2, complete... 40 8.5
25gb|AY034137.1| Rattus norvegicus aldehyde dehydrogenase gene, ex... 40 8.5
26gb|AF141932.2|AF141932 Rhizobium leguminosarum bv. trifolii bact... 40 8.5
27dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic D... 40 8.5
28gb|AF019230.1|AF019230 Murine leukemia virus strain SRS 19-6 com... 40 8.5
29dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 40 8.5
30gb|AE004446.1| Pseudomonas aeruginosa PAO1, section 7 of 529 of ... 40 8.5
31gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome 40 8.5
32emb|AJ328806.1|HSA328806 Homo sapiens genomic sequence surroundi... 40 8.5
33dbj|AK070104.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 8.5
34gb|AY104612.1| Zea mays PCO113007 mRNA sequence 40 8.5
35emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome 40 8.5 
>ref|XM_550208.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 869

 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Plus

                                                                       
Query: 219 ctggaagatcaggtcaccgccgggatcttcttggccgggaaaacaaagaagtactgggtg 278
           |||||||||||| ||  | |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 226 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaagaagtactgggtg 285

                                                                       
Query: 279 gacgagaggaccaggcacaactgcttcatgttgttccctagaggcctggccatcacctgg 338
           || ||||| || ||| |||||||||||||| |||| || |||||| || | ||||| |||
Sbjct: 286 gatgagagaactaggaacaactgcttcatgctgtttcccagaggcttgtctatcacttgg 345

                                                          
Query: 339 agcgaagaccccaagtactggacttggcaccccctgaaagaaggaag 385
           || ||||||||||  | |||||||||| | || ||||||||||||||
Sbjct: 346 agtgaagaccccagattctggacttggaaacctctgaaagaaggaag 392



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 405 cgctgcagaacgtctgctggctggaggtccaagggaagctggagctgtcccatctcacgc 464
           |||||||||||||||||||| | ||| |||| |||||||| || | |||| |||| || |
Sbjct: 431 cgctgcagaacgtctgctggttagagatccatgggaagcttgaacggtcctatcttacac 490

                              
Query: 465 caggagtcacctacgaggt 483
           ||||||||||||| |||||
Sbjct: 491 caggagtcacctatgaggt 509
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>dbj|AK102322.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090J07, full
           insert sequence
          Length = 944

 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Plus

                                                                       
Query: 219 ctggaagatcaggtcaccgccgggatcttcttggccgggaaaacaaagaagtactgggtg 278
           |||||||||||| ||  | |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 301 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaagaagtactgggtg 360

                                                                       
Query: 279 gacgagaggaccaggcacaactgcttcatgttgttccctagaggcctggccatcacctgg 338
           || ||||| || ||| |||||||||||||| |||| || |||||| || | ||||| |||
Sbjct: 361 gatgagagaactaggaacaactgcttcatgctgtttcccagaggcttgtctatcacttgg 420

                                                          
Query: 339 agcgaagaccccaagtactggacttggcaccccctgaaagaaggaag 385
           || ||||||||||  | |||||||||| | || ||||||||||||||
Sbjct: 421 agtgaagaccccagattctggacttggaaacctctgaaagaaggaag 467



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 405 cgctgcagaacgtctgctggctggaggtccaagggaagctggagctgtcccatctcacgc 464
           |||||||||||||||||||| | ||| |||| |||||||| || | |||| |||| || |
Sbjct: 506 cgctgcagaacgtctgctggttagagatccatgggaagcttgaacggtcctatcttacac 565

                              
Query: 465 caggagtcacctacgaggt 483
           ||||||||||||| |||||
Sbjct: 566 caggagtcacctatgaggt 584
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>dbj|AK063812.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-121-G12, full
           insert sequence
          Length = 869

 Score =  141 bits (71), Expect = 3e-30
 Identities = 143/167 (85%)
 Strand = Plus / Plus

                                                                       
Query: 219 ctggaagatcaggtcaccgccgggatcttcttggccgggaaaacaaagaagtactgggtg 278
           |||||||||||| ||  | |||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 226 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaagaagtactgggtg 285

                                                                       
Query: 279 gacgagaggaccaggcacaactgcttcatgttgttccctagaggcctggccatcacctgg 338
           || ||||| || ||| |||||||||||||| |||| || |||||| || | ||||| |||
Sbjct: 286 gatgagagaactaggaacaactgcttcatgctgtttcccagaggcttgtctatcacttgg 345

                                                          
Query: 339 agcgaagaccccaagtactggacttggcaccccctgaaagaaggaag 385
           || ||||||||||  | |||||||||| | || ||||||||||||||
Sbjct: 346 agtgaagaccccagattctggacttggaaacctctgaaagaaggaag 392



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Plus

                                                                       
Query: 405 cgctgcagaacgtctgctggctggaggtccaagggaagctggagctgtcccatctcacgc 464
           |||||||||||||||||||| | ||| |||| |||||||| || | |||| |||| || |
Sbjct: 431 cgctgcagaacgtctgctggttagagatccatgggaagcttgaacggtcctatcttacac 490

                              
Query: 465 caggagtcacctacgaggt 483
           ||||||||||||| |||||
Sbjct: 491 caggagtcacctatgaggt 509
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                           
Query: 265     agaagtactgggtggacgagaggaccaggcacaactgcttcatgttgttccctagaggcc 324
               |||||||||||||||| ||||| || ||| |||||||||||||| |||| || |||||| 
Sbjct: 3058272 agaagtactgggtggatgagagaactaggaacaactgcttcatgctgtttcccagaggct 3058213

                                                                           
Query: 325     tggccatcacctggagcgaagaccccaagtactggacttggcaccccctgaaagaaggaa 384
               || | ||||| ||||| ||||||||||  | |||||||||| | || |||||||||||||
Sbjct: 3058212 tgtctatcacttggagtgaagaccccagattctggacttggaaacctctgaaagaaggaa 3058153

                 
Query: 385     gg 386
               ||
Sbjct: 3058152 gg 3058151



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                           
Query: 405     cgctgcagaacgtctgctggctggaggtccaagggaagctggagctgtcccatctcacgc 464
               |||||||||||||||||||| | ||| |||| |||||||| || | |||| |||| || |
Sbjct: 3058002 cgctgcagaacgtctgctggttagagatccatgggaagcttgaacggtcctatcttacac 3057943

                                  
Query: 465     caggagtcacctacgaggt 483
               ||||||||||||| |||||
Sbjct: 3057942 caggagtcacctatgaggt 3057924



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                               
Query: 219     ctggaagatcaggtcaccgccgggatcttcttggccgggaaaacaaag 266
               |||||||||||| ||  | |||| ||||||||||| ||||||||||||
Sbjct: 3058418 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaag 3058371
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>dbj|AP002521.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
            clone:P0041E11
          Length = 146335

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                        
Query: 265  agaagtactgggtggacgagaggaccaggcacaactgcttcatgttgttccctagaggcc 324
            |||||||||||||||| ||||| || ||| |||||||||||||| |||| || |||||| 
Sbjct: 2060 agaagtactgggtggatgagagaactaggaacaactgcttcatgctgtttcccagaggct 2001

                                                                        
Query: 325  tggccatcacctggagcgaagaccccaagtactggacttggcaccccctgaaagaaggaa 384
            || | ||||| ||||| ||||||||||  | |||||||||| | || |||||||||||||
Sbjct: 2000 tgtctatcacttggagtgaagaccccagattctggacttggaaacctctgaaagaaggaa 1941

              
Query: 385  gg 386
            ||
Sbjct: 1940 gg 1939



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                        
Query: 405  cgctgcagaacgtctgctggctggaggtccaagggaagctggagctgtcccatctcacgc 464
            |||||||||||||||||||| | ||| |||| |||||||| || | |||| |||| || |
Sbjct: 1790 cgctgcagaacgtctgctggttagagatccatgggaagcttgaacggtcctatcttacac 1731

                               
Query: 465  caggagtcacctacgaggt 483
            ||||||||||||| |||||
Sbjct: 1730 caggagtcacctatgaggt 1712



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                            
Query: 219  ctggaagatcaggtcaccgccgggatcttcttggccgggaaaacaaag 266
            |||||||||||| ||  | |||| ||||||||||| ||||||||||||
Sbjct: 2206 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaag 2159
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>dbj|AP002539.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0433F09
          Length = 150150

 Score = 99.6 bits (50), Expect = 1e-17
 Identities = 104/122 (85%)
 Strand = Plus / Minus

                                                                         
Query: 265   agaagtactgggtggacgagaggaccaggcacaactgcttcatgttgttccctagaggcc 324
             |||||||||||||||| ||||| || ||| |||||||||||||| |||| || |||||| 
Sbjct: 26312 agaagtactgggtggatgagagaactaggaacaactgcttcatgctgtttcccagaggct 26253

                                                                         
Query: 325   tggccatcacctggagcgaagaccccaagtactggacttggcaccccctgaaagaaggaa 384
             || | ||||| ||||| ||||||||||  | |||||||||| | || |||||||||||||
Sbjct: 26252 tgtctatcacttggagtgaagaccccagattctggacttggaaacctctgaaagaaggaa 26193

               
Query: 385   gg 386
             ||
Sbjct: 26192 gg 26191



 Score = 69.9 bits (35), Expect = 1e-08
 Identities = 68/79 (86%)
 Strand = Plus / Minus

                                                                         
Query: 405   cgctgcagaacgtctgctggctggaggtccaagggaagctggagctgtcccatctcacgc 464
             |||||||||||||||||||| | ||| |||| |||||||| || | |||| |||| || |
Sbjct: 26042 cgctgcagaacgtctgctggttagagatccatgggaagcttgaacggtcctatcttacac 25983

                                
Query: 465   caggagtcacctacgaggt 483
             ||||||||||||| |||||
Sbjct: 25982 caggagtcacctatgaggt 25964



 Score = 48.1 bits (24), Expect = 0.035
 Identities = 42/48 (87%)
 Strand = Plus / Minus

                                                             
Query: 219   ctggaagatcaggtcaccgccgggatcttcttggccgggaaaacaaag 266
             |||||||||||| ||  | |||| ||||||||||| ||||||||||||
Sbjct: 26458 ctggaagatcagatctacaccggcatcttcttggcagggaaaacaaag 26411
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>dbj|AP006184.1| Sus scrofa CC chemokine receptor genes (CCR9, CXCR6, FYCO1), complete
              cds, clone: 0268F11
          Length = 141824

 Score = 46.1 bits (23), Expect = 0.14
 Identities = 29/31 (93%)
 Strand = Plus / Minus

                                             
Query: 569    cagcagcagaaggagaacctgcaggagaagc 599
              |||||| ||||||||| ||||||||||||||
Sbjct: 115284 cagcaggagaaggagagcctgcaggagaagc 115254
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>gb|DQ369998.1| HIV-1 isolate 04ZASK172B1 from South Africa, complete genome
          Length = 8821

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 31/34 (91%)
 Strand = Plus / Plus

                                              
Query: 565  gatccagcagcagaaggagaacctgcaggagaag 598
            |||||||||||||||||||| || |||| |||||
Sbjct: 8048 gatccagcagcagaaggagatccagcagcagaag 8081
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>emb|AL162424.20| Human DNA sequence from clone RP11-498E2 on chromosome 9 Contains the 5'
              end of the PTGS1 gene for prostaglandin-endoperoxide
              synthase 1 (prostaglandin G/H synthase and cyclooxygenase),
              the gene for mitochondrial ribosome recycling factor (MRRF)
              (RRF MRFF MTRRF), a novel gene (MGC2734), the LHX6 gene for
              LIM-homeobox protein 6, the 3' end of a novel gene
              (LOC254956) and five CpG islands, complete sequence
          Length = 223020

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 432    tccaagggaagctggagctgt 452
              |||||||||||||||||||||
Sbjct: 166741 tccaagggaagctggagctgt 166761
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>gb|AC009522.11| Homo sapiens 12 BAC RP11-591N1 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 128666

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 255   gggaaaacaaagaagtactgggtgg 279
             ||||||||||||||| |||||||||
Sbjct: 25330 gggaaaacaaagaagaactgggtgg 25354
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>gb|AY085730.1| Arabidopsis thaliana clone 17437 mRNA, complete sequence
          Length = 989

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 54/65 (83%)
 Strand = Plus / Plus

                                                                       
Query: 476 tacgaggtcttcttcgaggtgaagctcgacgacccggcctacgggtggtcgacgccggtg 535
           ||||||||  ||||| |||||||||| || || |||||||| || |||   |||||||||
Sbjct: 520 tacgaggtggtcttcaaggtgaagctagaggatccggcctatggatgggacacgccggtg 579

                
Query: 536 aacct 540
           |||||
Sbjct: 580 aacct 584
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>emb|AL953872.7| Zebrafish DNA sequence from clone CH211-235H23, complete sequence
          Length = 164584

 Score = 42.1 bits (21), Expect = 2.2
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 570    agcagcagaaggagaacctgc 590
              |||||||||||||||||||||
Sbjct: 156606 agcagcagaaggagaacctgc 156586
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 510     cggcctacgggtggtcgacgccgg 533
               ||||| ||||||||||||||||||
Sbjct: 3293512 cggcccacgggtggtcgacgccgg 3293535
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>gb|DQ058416.1| Rhizobium etli strain 8C-3 plasmid clone REB02, partial sequence
          Length = 190912

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 90    gtcgtgccgacggcgctcag 109
             ||||||||||||||||||||
Sbjct: 22280 gtcgtgccgacggcgctcag 22299
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>gb|AC137623.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0426G01,
              complete sequence
          Length = 173074

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 58     cctccgcctcctcacccaccgcgg 81
              ||||||||||||| ||||||||||
Sbjct: 155220 cctccgcctcctcccccaccgcgg 155243
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>gb|AC124836.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone
             OSJNBb0092E21, complete sequence
          Length = 132649

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 58    cctccgcctcctcacccaccgcgg 81
             ||||||||||||| ||||||||||
Sbjct: 26954 cctccgcctcctcccccaccgcgg 26977
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>gb|AE008935.1| Agrobacterium tumefaciens str. C58 AT plasmid section 10 of 49 of the
            complete sequence
          Length = 13029

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   gtcgtgccgacggcgctcag 109
            ||||||||||||||||||||
Sbjct: 6829 gtcgtgccgacggcgctcag 6810
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>gb|AE007883.1| Agrobacterium tumefaciens str. C58 plasmid AT, section 11 of 50 of
            the complete sequence
          Length = 12612

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 90   gtcgtgccgacggcgctcag 109
            ||||||||||||||||||||
Sbjct: 6412 gtcgtgccgacggcgctcag 6393
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>ref|XM_806090.1| Trypanosoma cruzi strain CL Brener Unc104-like kinesin
           (Tc00.1047053510687.100) partial mRNA
          Length = 2196

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 338 gagcgaagaccccaagtact 357
           ||||||||||||||||||||
Sbjct: 753 gagcgaagaccccaagtact 734
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>gb|BC059305.1| Xenopus laevis hypothetical protein MGC68950, mRNA (cDNA clone
            MGC:68950 IMAGE:4959212), complete cds
          Length = 4785

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 572  cagcagaaggagaacctgcaggag 595
            |||||||||||||| |||||||||
Sbjct: 1206 cagcagaaggagaagctgcaggag 1229
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>ref|XM_764361.1| Giardia lamblia ATCC 50803 hypothetical protein (GLP_177_679_2166)
            partial mRNA
          Length = 1488

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 172  tgctccgggagatcgtcgcc 191
            ||||||||||||||||||||
Sbjct: 1454 tgctccgggagatcgtcgcc 1473
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>dbj|AB187566.1| Murine leukemia virus Graffi GV-1.4 DNA, complete genome
          Length = 8259

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 258  aaaacaaagaagtactgggt 277
            ||||||||||||||||||||
Sbjct: 4686 aaaacaaagaagtactgggt 4705
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>dbj|AB187565.1| Murine leukemia virus Graffi GV-1.2 DNA, complete genome
          Length = 8319

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 258  aaaacaaagaagtactgggt 277
            ||||||||||||||||||||
Sbjct: 4687 aaaacaaagaagtactgggt 4706
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>gb|AC016994.8| Homo sapiens BAC clone RP11-19J8 from 2, complete sequence
          Length = 48827

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 311   gttccctagaggcctggcca 330
             ||||||||||||||||||||
Sbjct: 33620 gttccctagaggcctggcca 33601
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>gb|AY034137.1| Rattus norvegicus aldehyde dehydrogenase gene, exons 3 through 13 and
            partial cds; nuclear gene for mitochondrial product
          Length = 13815

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 585  acctgcaggagaagcccaggggga 608
            ||||||||||||||||||| ||||
Sbjct: 8243 acctgcaggagaagcccagaggga 8220
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>gb|AF141932.2|AF141932 Rhizobium leguminosarum bv. trifolii bacteriocin gene cluster,
            complete sequence
          Length = 18282

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 215  cgcgctggaagatcaggtca 234
            ||||||||||||||||||||
Sbjct: 6634 cgcgctggaagatcaggtca 6615
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>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete
                sequence
          Length = 29737217

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                        
Query: 58       cctccgcctcctcacccaccgcgg 81
                ||||||||||||| ||||||||||
Sbjct: 20483475 cctccgcctcctcccccaccgcgg 20483498
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>gb|AF019230.1|AF019230 Murine leukemia virus strain SRS 19-6 complete genome
          Length = 8256

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 258  aaaacaaagaagtactgggt 277
            ||||||||||||||||||||
Sbjct: 4689 aaaacaaagaagtactgggt 4708
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>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                           
Query: 487     cttcgaggtgaagctcgacgacccggcc 514
               ||||| ||| ||||||||||||||||||
Sbjct: 5732998 cttcggggtcaagctcgacgacccggcc 5732971
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>gb|AE004446.1| Pseudomonas aeruginosa PAO1, section 7 of 529 of the complete genome
          Length = 19762

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 199  atgtcaccgacgtagccgcgctgg 222
            |||||||||||| |||||||||||
Sbjct: 4050 atgtcaccgacgaagccgcgctgg 4073
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>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome
          Length = 5013479

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 31      gggcggcgccgtcgcgaccg 50
               ||||||||||||||||||||
Sbjct: 3213569 gggcggcgccgtcgcgaccg 3213588



 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 173     gctccgggagatcgtcgccg 192
               ||||||||||||||||||||
Sbjct: 2699045 gctccgggagatcgtcgccg 2699026
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>emb|AJ328806.1|HSA328806 Homo sapiens genomic sequence surrounding NotI site, clone
           NR1-MD24R
          Length = 748

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 573 agcagaaggagaacctgcag 592
           ||||||||||||||||||||
Sbjct: 316 agcagaaggagaacctgcag 297
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>dbj|AK070104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023045K24, full
            insert sequence
          Length = 3603

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 58   cctccgcctcctcacccaccgcgg 81
            ||||||||||||| ||||||||||
Sbjct: 3174 cctccgcctcctcccccaccgcgg 3197
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>gb|AY104612.1| Zea mays PCO113007 mRNA sequence
          Length = 1164

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                   
Query: 51  gaggcgtcctccgcctcctcaccc 74
           |||||||||||| |||||||||||
Sbjct: 258 gaggcgtcctcctcctcctcaccc 235
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>emb|CR936257.1| Natronomonas pharaonis DSM 2160 complete genome
          Length = 2595221

 Score = 40.1 bits (20), Expect = 8.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 470     gtcacctacgaggtcttcttcgaggtga 497
               |||||| |||||| ||||||||||||||
Sbjct: 1001502 gtcaccgacgaggccttcttcgaggtga 1001529


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,874,751
Number of Sequences: 3902068
Number of extensions: 4874751
Number of successful extensions: 100448
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 99865
Number of HSP's gapped (non-prelim): 583
length of query: 624
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 601
effective length of database: 17,143,297,704
effective search space: 10303121920104
effective search space used: 10303121920104
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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