ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal31o20 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AJ314595.1|HVU314595 Hordeum vulgare mRNA for putative ribosomal protein S27 (rps27C gene) Length = 521 Score = 710 bits (358), Expect = 0.0 Identities = 384/394 (97%), Gaps = 9/394 (2%) Strand = Plus / Plus Query: 1 tctcccccgccgccaccccgtccctgcatcctctcccacgccaagaccgccgcc------ 54 |||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 10 tctcccccgccgccaccccgtccctgcatcctctcccacgccaagaccgccgccgccgcc 69 Query: 55 ---gccgctcgtcaagatggtgctccagaacgacatcgacctcctcaacccgccggcgga 111 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 70 gccgccgctcgtcaagatggtgctccagaacgacatcgacctcctcaacccgccggcgga 129 Query: 112 gctcgagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcat 171 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 130 gctcgagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcat 189 Query: 172 ggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactctcagaccgt 231 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 190 ggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactctcagaccgt 249 Query: 232 ggtggtgtgcccgggctgccagacggtgctctgccaacccaccggcggaaaggcgaggct 291 ||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 250 ggtggtgtgcccgggctgccagacggtgctctgccaacccaccggtggaaaggcgaggct 309 Query: 292 caccgagggatgctccttccgccggaagggtgactaagttgcacgcctgtttatgggaaa 351 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 310 caccgagggatgctccttccgccggaagggtgactaagttgcacgcctgtttatgggaaa 369 Query: 352 atgaagccccactgaacgttacttttgaagtact 385 |||||||||||||||||||||||||||||||||| Sbjct: 370 atgaagccccactgaacgttacttttgaagtact 403
>dbj|AK068012.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013129I21, full insert sequence Length = 878 Score = 359 bits (181), Expect = 4e-96 Identities = 238/257 (92%) Strand = Plus / Plus Query: 63 tcaagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagc 122 |||||||||||||| ||||||||||||||| || ||||||||||||||||| ||||||| Sbjct: 85 tcaagatggtgctctcgaacgacatcgacctgcttaacccgccggcggagctggagaagc 144 Query: 123 tcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagt 182 ||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||| Sbjct: 145 tcaagcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagt 204 Query: 183 gccagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcc 242 |||||||||||||||||||||||||||| ||||||||||| ||||||||||| ||||||| Sbjct: 205 gccagggctgcttcaacataacgactgtattcagccactcccagaccgtggttgtgtgcc 264 Query: 243 cgggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggat 302 ||||||||||||| ||||||||||| || || || || ||||| |||||||| ||||| | Sbjct: 265 cgggctgccagaccgtgctctgccagcctactggtgggaaggccaggctcacggagggct 324 Query: 303 gctccttccgccggaag 319 ||||||||||||||||| Sbjct: 325 gctccttccgccggaag 341
>emb|AJ314570.1|HVU314570 Hordeum vulgare rps27C gene for putative ribosomal protein S27 Length = 1754 Score = 357 bits (180), Expect = 2e-95 Identities = 183/184 (99%) Strand = Plus / Plus Query: 202 aacgactgtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtgct 261 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1305 aacgactgtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtgct 1364 Query: 262 ctgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccgccggaaggg 321 ||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1365 ctgccaacccaccggtggaaaggcgaggctcaccgagggatgctccttccgccggaaggg 1424 Query: 322 tgactaagttgcacgcctgtttatgggaaaatgaagccccactgaacgttacttttgaag 381 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 1425 tgactaagttgcacgcctgtttatgggaaaatgaagccccactgaacgttacttttgaag 1484 Query: 382 tact 385 |||| Sbjct: 1485 tact 1488 Score = 206 bits (104), Expect = 4e-50 Identities = 104/104 (100%) Strand = Plus / Plus Query: 70 ggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagca 129 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 477 ggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagca 536 Query: 130 caagaagaagcgcctcgtgcagtcccccaactcgttcttcatgg 173 |||||||||||||||||||||||||||||||||||||||||||| Sbjct: 537 caagaagaagcgcctcgtgcagtcccccaactcgttcttcatgg 580 Score = 117 bits (59), Expect = 3e-23 Identities = 59/59 (100%) Strand = Plus / Plus Query: 1 tctcccccgccgccaccccgtccctgcatcctctcccacgccaagaccgccgccgccgc 59 ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 293 tctcccccgccgccaccccgtccctgcatcctctcccacgccaagaccgccgccgccgc 351 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 172 ggatgtcaagtgccagggctgcttcaacat 201 |||||||||||||||||||||||||||||| Sbjct: 679 ggatgtcaagtgccagggctgcttcaacat 708
>ref|XM_472001.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 261 Score = 349 bits (176), Expect = 4e-93 Identities = 233/252 (92%) Strand = Plus / Plus Query: 68 atggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaag 127 ||||||||| ||||||||||||||| || ||||||||||||||||| |||||||||||| Sbjct: 1 atggtgctctcgaacgacatcgacctgcttaacccgccggcggagctggagaagctcaag 60 Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 187 |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||| Sbjct: 61 cacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtgccag 120 Query: 188 ggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccgggc 247 ||||||||||||||||||||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 121 ggctgcttcaacataacgactgtattcagccactcccagaccgtggttgtgtgcccgggc 180 Query: 248 tgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctcc 307 |||||||| ||||||||||| || || || || ||||| |||||||| ||||| |||||| Sbjct: 181 tgccagaccgtgctctgccagcctactggtgggaaggccaggctcacggagggctgctcc 240 Query: 308 ttccgccggaag 319 |||||||||||| Sbjct: 241 ttccgccggaag 252
>ref|XM_465641.1| Oryza sativa (japonica cultivar-group), mRNA Length = 667 Score = 341 bits (172), Expect = 1e-90 Identities = 229/248 (92%) Strand = Plus / Plus Query: 80 aacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagcacaagaagaag 139 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 125 aacgacatcgacctcctcaaccctcccgcggagctcgagaagctcaagcacaagaagaag 184 Query: 140 cgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccagggctgcttcaac 199 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 185 cgcctcgtgcagtcccccaactcattcttcatggatgtcaagtgccagggatgcttcaac 244 Query: 200 ataacgactgtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtg 259 ||||| || |||||||||||||| ||||| || || |||||||| |||||||| |||||| Sbjct: 245 ataacaaccgtgttcagccactcccagactgttgttgtgtgcccaggctgccaaacggtg 304 Query: 260 ctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccgccggaag 319 |||||||| ||||| || || ||||| |||||||||||||| |||||||||||||||||| Sbjct: 305 ctctgccagcccacaggagggaaggccaggctcaccgagggctgctccttccgccggaag 364 Query: 320 ggtgacta 327 || ||||| Sbjct: 365 ggcgacta 372
>dbj|AK099723.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013089A06, full insert sequence Length = 667 Score = 341 bits (172), Expect = 1e-90 Identities = 229/248 (92%) Strand = Plus / Plus Query: 80 aacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagcacaagaagaag 139 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 125 aacgacatcgacctcctcaaccctcccgcggagctcgagaagctcaagcacaagaagaag 184 Query: 140 cgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccagggctgcttcaac 199 ||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||| Sbjct: 185 cgcctcgtgcagtcccccaactcattcttcatggatgtcaagtgccagggatgcttcaac 244 Query: 200 ataacgactgtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtg 259 ||||| || |||||||||||||| ||||| || || |||||||| |||||||| |||||| Sbjct: 245 ataacaaccgtgttcagccactcccagactgttgttgtgtgcccaggctgccaaacggtg 304 Query: 260 ctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccgccggaag 319 |||||||| ||||| || || ||||| |||||||||||||| |||||||||||||||||| Sbjct: 305 ctctgccagcccacaggagggaaggccaggctcaccgagggctgctccttccgccggaag 364 Query: 320 ggtgacta 327 || ||||| Sbjct: 365 ggcgacta 372
>gb|AY106437.1| Zea mays PCO122601 mRNA sequence Length = 610 Score = 333 bits (168), Expect = 2e-88 Identities = 240/264 (90%) Strand = Plus / Plus Query: 64 caagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagct 123 ||||||||| |||||||||||||||||||| |||||||||||||| |||||||||||||| Sbjct: 113 caagatggttctccagaacgacatcgaccttctcaacccgccggcagagctcgagaagct 172 Query: 124 caagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtg 183 |||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 173 caagcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtg 232 Query: 184 ccagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgccc 243 |||||| ||||||| |||||| || || ||||||||||| ||||| || || |||||||| Sbjct: 233 ccagggatgcttcagcataaccacggttttcagccactcccagactgttgttgtgtgccc 292 Query: 244 gggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatg 303 |||||||| || || |||||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 293 aggctgccaaactgttctctgccagcccacgggaggaaaggcgaggctcacggagggatg 352 Query: 304 ctccttccgccggaagggtgacta 327 ||| |||||||||||||| ||||| Sbjct: 353 ctctttccgccggaagggagacta 376
>emb|X85544.2|HVMNE1MR H.vulgare mRNA for putative zinc finger protein Length = 493 Score = 329 bits (166), Expect = 4e-87 Identities = 238/262 (90%) Strand = Plus / Plus Query: 67 gatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaa 126 ||||||||| ||||||||||||||||| || ||||||||||||||||||||||||||||| Sbjct: 34 gatggtgctgcagaacgacatcgacctgctgaacccgccggcggagctcgagaagctcaa 93 Query: 127 gcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgcca 186 ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 94 gcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggacgtcaagtgcca 153 Query: 187 gggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccggg 246 ||||||||||||||| || |||||||||||||| || ||||| || ||||||||||| || Sbjct: 154 gggctgcttcaacatcactactgtgttcagccattcccagactgttgtggtgtgcccagg 213 Query: 247 ctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctc 306 ||||||||||||||||||||| || || || || ||||| ||||| |||||||| ||||| Sbjct: 214 ctgccagacggtgctctgccagccaacgggtggcaaggccaggctaaccgagggttgctc 273 Query: 307 cttccgccggaagggtgactaa 328 |||||| || ||||| |||||| Sbjct: 274 cttccgtcgcaagggcgactaa 295
>emb|AJ314594.1|HVU314594 Hordeum vulgare mRNA for putative ribosomal protein S27 (rps27A gene) Length = 596 Score = 321 bits (162), Expect = 9e-85 Identities = 237/262 (90%) Strand = Plus / Plus Query: 67 gatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaa 126 ||||||||| ||||||||||||||||| |||||||||||||| ||||||||||||||||| Sbjct: 66 gatggtgctgcagaacgacatcgacctgctcaacccgccggccgagctcgagaagctcaa 125 Query: 127 gcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgcca 186 ||||||||||||||||||||| |||||||||||||| ||||||||||| ||||||||||| Sbjct: 126 gcacaagaagaagcgcctcgtccagtcccccaactctttcttcatggacgtcaagtgcca 185 Query: 187 gggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccggg 246 ||| ||||||||||| || ||||||||||||||||| ||||| || ||||||||||| || Sbjct: 186 gggttgcttcaacatcactactgtgttcagccactcccagactgtcgtggtgtgcccagg 245 Query: 247 ctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctc 306 |||||| || ||||||||||| || ||||| || ||||| ||||| || ||||| ||||| Sbjct: 246 ctgccaaacagtgctctgccagccaaccggtggcaaggccaggctaactgagggctgctc 305 Query: 307 cttccgccggaagggtgactaa 328 ||||||||| ||||| |||||| Sbjct: 306 cttccgccgcaagggcgactaa 327
>gb|BT018246.1| Zea mays clone EL01N0563D10.c mRNA sequence Length = 536 Score = 309 bits (156), Expect = 4e-81 Identities = 237/264 (89%) Strand = Plus / Plus Query: 64 caagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagct 123 ||||||||| |||||||||||||||||||| || ||||||||||| ||||||||||| || Sbjct: 43 caagatggttctccagaacgacatcgaccttctgaacccgccggcagagctcgagaaact 102 Query: 124 caagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtg 183 |||||||||||||||||||||||| || ||||||||||| |||||||||||||||||||| Sbjct: 103 caagcacaagaagaagcgcctcgtccaatcccccaactccttcttcatggatgtcaagtg 162 Query: 184 ccagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgccc 243 |||||| ||||||| |||||| || || ||||||||||| ||||| || || |||||||| Sbjct: 163 ccagggatgcttcagcataaccacggttttcagccactcccagactgttgttgtgtgccc 222 Query: 244 gggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatg 303 |||||||| || || |||||||| ||||| || ||||||||||||||||| |||||||| Sbjct: 223 aggctgccaaactgttctctgccagcccacgggaggaaaggcgaggctcacggagggatg 282 Query: 304 ctccttccgccggaagggtgacta 327 ||| |||||||||||||| ||||| Sbjct: 283 ctctttccgccggaagggagacta 306
>gb|AY781904.1| Saccharum hybrid cultivar isolate c322 S27 ribosomal protein mRNA, complete cds Length = 567 Score = 305 bits (154), Expect = 6e-80 Identities = 232/258 (89%) Strand = Plus / Plus Query: 64 caagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagct 123 |||||||||||| ||||||||||||||| | |||||||||||||| ||||| |||||||| Sbjct: 88 caagatggtgctgcagaacgacatcgacttgctcaacccgccggcagagcttgagaagct 147 Query: 124 caagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtg 183 ||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||| Sbjct: 148 aaagcacaagaagaagcgcctcgtccagtcccccaactccttcttcatggatgtcaagtg 207 Query: 184 ccagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgccc 243 ||||||||| |||| |||||| ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 208 ccagggctgtttcagcataaccactgtgttcagccactcccagactgtggttgtgtgccc 267 Query: 244 gggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatg 303 |||||||| || || ||||||||||| || || || ||||| |||||||||||||| || Sbjct: 268 aggctgccaaactgttctctgccaacctactggtgggaaggccaggctcaccgaggggtg 327 Query: 304 ctccttccgccggaaggg 321 ||||||||| || ||||| Sbjct: 328 ctccttccgtcgcaaggg 345
>gb|AY104604.1| Zea mays PCO122603 mRNA sequence Length = 618 Score = 262 bits (132), Expect = 7e-67 Identities = 231/264 (87%) Strand = Plus / Plus Query: 64 caagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagct 123 ||||||||| |||||||||||||| || || |||||||||||||| || ||||||||||| Sbjct: 110 caagatggttctccagaacgacattgatctgctcaacccgccggcagaactcgagaagct 169 Query: 124 caagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtg 183 |||||||||||| ||| | ||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 170 caagcacaagaaaaagagactcgtccagtcgcccaactccttcttcatggatgttaagtg 229 Query: 184 ccagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgccc 243 |||||| ||||||| |||||| ||||| ||||||||||| ||||| || || |||||||| Sbjct: 230 ccaggggtgcttcagcataaccactgttttcagccactcccagactgttgttgtgtgccc 289 Query: 244 gggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatg 303 |||||||| || || |||||||||||||| || |||||||| |||||||| ||||| || Sbjct: 290 tggctgccaaactgtcctctgccaacccacaggaggaaaggcaaggctcactgagggctg 349 Query: 304 ctccttccgccggaagggtgacta 327 ||| |||||| ||||||| ||||| Sbjct: 350 ctctttccgcaggaagggagacta 373
>gb|AY104498.1| Zea mays PCO122602 mRNA sequence Length = 671 Score = 258 bits (130), Expect = 1e-65 Identities = 226/258 (87%) Strand = Plus / Plus Query: 64 caagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagct 123 |||||||||||| || |||||||| ||| | ||||| || ||||| ||||| |||||||| Sbjct: 93 caagatggtgctgcaaaacgacattgacttactcaatccaccggcagagcttgagaagct 152 Query: 124 caagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtg 183 ||||||||||||||||| || || |||||||||||||| |||||||||||||||||||| Sbjct: 153 aaagcacaagaagaagcggctagtccagtcccccaactccttcttcatggatgtcaagtg 212 Query: 184 ccagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgccc 243 ||||||||| |||| |||||| ||||||||||||||||| ||||| ||||| |||||||| Sbjct: 213 ccagggctgtttcagcataaccactgtgttcagccactcccagactgtggttgtgtgccc 272 Query: 244 gggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatg 303 |||||||| || || || |||||||| ||||| || ||||| |||||||||||||| || Sbjct: 273 aggctgccaaactgttctgtgccaacctaccggtgggaaggccaggctcaccgaggggtg 332 Query: 304 ctccttccgccggaaggg 321 ||||||||| || ||||| Sbjct: 333 ctccttccgtcgcaaggg 350
>gb|AF111029.2|AF111029 Zea mays 40S ribosomal protein S27 homolog mRNA, complete cds Length = 572 Score = 254 bits (128), Expect = 2e-64 Identities = 230/264 (87%) Strand = Plus / Plus Query: 64 caagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagct 123 ||||||||| |||||||||||||| || || |||||||||||||| || ||||||||||| Sbjct: 79 caagatggttctccagaacgacattgatctgctcaacccgccggcagaactcgagaagct 138 Query: 124 caagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtg 183 |||||||||||| ||| | ||||| ||||| |||||||| |||||||||||||| ||||| Sbjct: 139 caagcacaagaaaaagagactcgtccagtcgcccaactccttcttcatggatgttaagtg 198 Query: 184 ccagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgccc 243 |||||| ||||||| |||||| ||||| ||||||||||| ||||| || || |||||||| Sbjct: 199 ccaggggtgcttcagcataaccactgttttcagccactcccagactgttgttgtgtgccc 258 Query: 244 gggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatg 303 |||||||| || || |||||||||||||| || |||||||| |||||||| ||||| || Sbjct: 259 tggctgccaaactgtcctctgccaacccacaggaggaaaggcaaggctcactgagggctg 318 Query: 304 ctccttccgccggaagggtgacta 327 || |||||| ||||||| ||||| Sbjct: 319 ttctttccgcaggaagggagacta 342
>gb|BT017012.1| Zea mays clone EK07D2311A08.c mRNA sequence Length = 501 Score = 198 bits (100), Expect = 9e-48 Identities = 223/264 (84%) Strand = Plus / Plus Query: 64 caagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagct 123 ||||||||| |||||||||||||| || || |||||||||||||| || ||||||||||| Sbjct: 37 caagatggttctccagaacgacattgatctgctcaacccgccggcagaactcgagaagct 96 Query: 124 caagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtg 183 ||||| |||||| ||| | | || ||||| |||||||| |||||||||||||| ||||| Sbjct: 97 caagcccaagaaaaagagatttgtccagtcgcccaactccttcttcatggatgttaagtg 156 Query: 184 ccagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgccc 243 |||||| ||||||| |||||| |||| ||||||| ||| ||||| || || |||||||| Sbjct: 157 ccaggggtgcttcagcataacccctgttttcagcccctcccagactgttgttgtgtgccc 216 Query: 244 gggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatg 303 |||||||| || || |||||||||||| | || |||||||| |||||| | ||||| || Sbjct: 217 tggctgccaaactgtcctctgccaacccccaggaggaaaggcaaggctccctgagggctg 276 Query: 304 ctccttccgccggaagggtgacta 327 || |||||| ||||||| ||||| Sbjct: 277 ttctttccgcaggaagggagacta 300
>ref|XM_472347.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 138 Score = 186 bits (94), Expect = 4e-44 Identities = 112/118 (94%) Strand = Plus / Plus Query: 80 aacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagcacaagaagaag 139 |||||||||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 13 aacgacatcgacctgctgaacccgcccgcggagctggagaagctcaagcacaagaagaag 72 Query: 140 cgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccagggctgcttca 197 |||||||| |||||||||||||| |||||||||||||||||||||||||||||||||| Sbjct: 73 cgcctcgtccagtcccccaactccttcttcatggatgtcaagtgccagggctgcttca 130
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 163 bits (82), Expect = 5e-37 Identities = 91/94 (96%) Strand = Plus / Plus Query: 80 aacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagcacaagaagaag 139 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 16545726 aacgacatcgacctcctcaaccctcccgcggagctcgagaagctcaagcacaagaagaag 16545785 Query: 140 cgcctcgtgcagtcccccaactcgttcttcatgg 173 ||||||||||||||||||||||| |||||||||| Sbjct: 16545786 cgcctcgtgcagtcccccaactcattcttcatgg 16545819 Score = 133 bits (67), Expect = 5e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 209 gtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtgctctgccaa 268 |||||||||||||| ||||| || || |||||||| |||||||| |||||||||||||| Sbjct: 16546726 gtgttcagccactcccagactgttgttgtgtgcccaggctgccaaacggtgctctgccag 16546785 Query: 269 cccaccggcggaaaggcgaggctcaccgagggatgctccttccgccggaagggtgacta 327 ||||| || || ||||| |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 16546786 cccacaggagggaaggccaggctcaccgagggctgctccttccgccggaagggcgacta 16546844 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 172 ggatgtcaagtgccagggctgcttcaacat 201 |||||||||||||||||| ||||||||||| Sbjct: 16545979 ggatgtcaagtgccagggatgcttcaacat 16546008
>dbj|AP005316.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, PAC clone:P0527E02 Length = 176826 Score = 163 bits (82), Expect = 5e-37 Identities = 91/94 (96%) Strand = Plus / Plus Query: 80 aacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagcacaagaagaag 139 ||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||| Sbjct: 119141 aacgacatcgacctcctcaaccctcccgcggagctcgagaagctcaagcacaagaagaag 119200 Query: 140 cgcctcgtgcagtcccccaactcgttcttcatgg 173 ||||||||||||||||||||||| |||||||||| Sbjct: 119201 cgcctcgtgcagtcccccaactcattcttcatgg 119234 Score = 133 bits (67), Expect = 5e-28 Identities = 106/119 (89%) Strand = Plus / Plus Query: 209 gtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtgctctgccaa 268 |||||||||||||| ||||| || || |||||||| |||||||| |||||||||||||| Sbjct: 120141 gtgttcagccactcccagactgttgttgtgtgcccaggctgccaaacggtgctctgccag 120200 Query: 269 cccaccggcggaaaggcgaggctcaccgagggatgctccttccgccggaagggtgacta 327 ||||| || || ||||| |||||||||||||| |||||||||||||||||||| ||||| Sbjct: 120201 cccacaggagggaaggccaggctcaccgagggctgctccttccgccggaagggcgacta 120259 Score = 52.0 bits (26), Expect = 0.001 Identities = 29/30 (96%) Strand = Plus / Plus Query: 172 ggatgtcaagtgccagggctgcttcaacat 201 |||||||||||||||||| ||||||||||| Sbjct: 119394 ggatgtcaagtgccagggatgcttcaacat 119423
>emb|AL662963.3|OSJN00163 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0020I02, complete sequence Length = 172435 Score = 151 bits (76), Expect = 2e-33 Identities = 97/104 (93%) Strand = Plus / Plus Query: 70 ggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagca 129 ||||||| ||||||||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 927 ggtgctctcgaacgacatcgacctgcttaacccgccggcggagctggagaagctcaagca 986 Query: 130 caagaagaagcgcctcgtgcagtcccccaactcgttcttcatgg 173 |||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 987 caagaagaagcgcctcgtccagtcccccaactccttcttcatgg 1030 Score = 139 bits (70), Expect = 7e-30 Identities = 106/118 (89%) Strand = Plus / Plus Query: 202 aacgactgtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtgct 261 ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 1853 aacgactgtattcagccactcccagaccgtggttgtgtgcccgggctgccagaccgtgct 1912 Query: 262 ctgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccgccggaag 319 |||||| || || || || ||||| |||||||| ||||| |||||||||||||||||| Sbjct: 1913 ctgccagcctactggtgggaaggccaggctcacggagggctgctccttccgccggaag 1970 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 172 ggatgtcaagtgccagggctgcttcaacat 201 |||||||||||||||||||||||||||||| Sbjct: 1113 ggatgtcaagtgccagggctgcttcaacat 1142
>emb|AL606995.3|OSJN00131 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0085H11, complete sequence Length = 132394 Score = 151 bits (76), Expect = 2e-33 Identities = 97/104 (93%) Strand = Plus / Plus Query: 70 ggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagca 129 ||||||| ||||||||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 132259 ggtgctctcgaacgacatcgacctgcttaacccgccggcggagctggagaagctcaagca 132318 Query: 130 caagaagaagcgcctcgtgcagtcccccaactcgttcttcatgg 173 |||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 132319 caagaagaagcgcctcgtccagtcccccaactccttcttcatgg 132362
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 151 bits (76), Expect = 2e-33 Identities = 97/104 (93%) Strand = Plus / Plus Query: 70 ggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagca 129 ||||||| ||||||||||||||| || ||||||||||||||||| |||||||||||||| Sbjct: 16471693 ggtgctctcgaacgacatcgacctgcttaacccgccggcggagctggagaagctcaagca 16471752 Query: 130 caagaagaagcgcctcgtgcagtcccccaactcgttcttcatgg 173 |||||||||||||||||| |||||||||||||| |||||||||| Sbjct: 16471753 caagaagaagcgcctcgtccagtcccccaactccttcttcatgg 16471796 Score = 139 bits (70), Expect = 7e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 80 aacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagcacaagaagaag 139 |||||||||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 19721488 aacgacatcgacctgctgaacccgcccgcggagctggagaagctcaagcacaagaagaag 19721547 Query: 140 cgcctcgtgcagtcccccaactcgttcttcatgg 173 |||||||| |||||||||||||| |||||||||| Sbjct: 19721548 cgcctcgtccagtcccccaactccttcttcatgg 19721581 Score = 139 bits (70), Expect = 7e-30 Identities = 106/118 (89%) Strand = Plus / Plus Query: 202 aacgactgtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtgct 261 ||||||||| ||||||||||| ||||||||||| |||||||||||||||||||| ||||| Sbjct: 16472619 aacgactgtattcagccactcccagaccgtggttgtgtgcccgggctgccagaccgtgct 16472678 Query: 262 ctgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccgccggaag 319 |||||| || || || || ||||| |||||||| ||||| |||||||||||||||||| Sbjct: 16472679 ctgccagcctactggtgggaaggccaggctcacggagggctgctccttccgccggaag 16472736 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 206 actgtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtgctctgc 265 ||||||||||||||||| ||||| |||||||| |||||||||||||| || ||||| ||| Sbjct: 19725061 actgtgttcagccactcccagacagtggtggtctgcccgggctgccaaaccgtgctttgc 19725120 Query: 266 caacccaccggcggaaaggcgaggctcaccgagggatgctccttccgccg 315 || || || || |||||||| ||||| || ||||| |||||||||||||| Sbjct: 19725121 cagcctacaggtggaaaggccaggctaacggaggggtgctccttccgccg 19725170 Score = 60.0 bits (30), Expect = 6e-06 Identities = 30/30 (100%) Strand = Plus / Plus Query: 172 ggatgtcaagtgccagggctgcttcaacat 201 |||||||||||||||||||||||||||||| Sbjct: 16471879 ggatgtcaagtgccagggctgcttcaacat 16471908 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 172 ggatgtcaagtgccagggctgcttca 197 |||||||||||||||||||||||||| Sbjct: 19722557 ggatgtcaagtgccagggctgcttca 19722582
>emb|AL731642.3|OSJN00289 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0014D23, complete sequence Length = 133759 Score = 139 bits (70), Expect = 7e-30 Identities = 88/94 (93%) Strand = Plus / Plus Query: 80 aacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagcacaagaagaag 139 |||||||||||||| || |||||||| |||||||| |||||||||||||||||||||||| Sbjct: 9950 aacgacatcgacctgctgaacccgcccgcggagctggagaagctcaagcacaagaagaag 10009 Query: 140 cgcctcgtgcagtcccccaactcgttcttcatgg 173 |||||||| |||||||||||||| |||||||||| Sbjct: 10010 cgcctcgtccagtcccccaactccttcttcatgg 10043 Score = 107 bits (54), Expect = 3e-20 Identities = 96/110 (87%) Strand = Plus / Plus Query: 206 actgtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtgctctgc 265 ||||||||||||||||| ||||| |||||||| |||||||||||||| || ||||| ||| Sbjct: 13523 actgtgttcagccactcccagacagtggtggtctgcccgggctgccaaaccgtgctttgc 13582 Query: 266 caacccaccggcggaaaggcgaggctcaccgagggatgctccttccgccg 315 || || || || |||||||| ||||| || ||||| |||||||||||||| Sbjct: 13583 cagcctacaggtggaaaggccaggctaacggaggggtgctccttccgccg 13632 Score = 52.0 bits (26), Expect = 0.001 Identities = 26/26 (100%) Strand = Plus / Plus Query: 172 ggatgtcaagtgccagggctgcttca 197 |||||||||||||||||||||||||| Sbjct: 11019 ggatgtcaagtgccagggctgcttca 11044
>gb|AY781893.1| Saccharum hybrid cultivar isolate 32a2pro ribosomal protein S27 genes, partial cds Length = 1945 Score = 137 bits (69), Expect = 3e-29 Identities = 90/97 (92%) Strand = Plus / Plus Query: 77 cagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagcacaagaag 136 ||||||||||||||| | |||||||||||||| ||||| |||||||| |||||||||||| Sbjct: 4 cagaacgacatcgacttgctcaacccgccggcagagcttgagaagctaaagcacaagaag 63 Query: 137 aagcgcctcgtgcagtcccccaactcgttcttcatgg 173 ||||||||||| |||||||||||||| |||||||||| Sbjct: 64 aagcgcctcgtccagtcccccaactccttcttcatgg 100 Score = 111 bits (56), Expect = 2e-21 Identities = 101/116 (87%) Strand = Plus / Plus Query: 206 actgtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtgctctgc 265 ||||||||||||||||| ||||| ||||| |||||||| |||||||| || || |||||| Sbjct: 1377 actgtgttcagccactcccagactgtggttgtgtgcccaggctgccaaactgttctctgc 1436 Query: 266 caacccaccggcggaaaggcgaggctcaccgagggatgctccttccgccggaaggg 321 ||||| || || || ||||| |||||||||||||| ||||||||||| || ||||| Sbjct: 1437 caacctactggtgggaaggccaggctcaccgaggggtgctccttccgtcgcaaggg 1492 Score = 44.1 bits (22), Expect = 0.33 Identities = 25/26 (96%) Strand = Plus / Plus Query: 172 ggatgtcaagtgccagggctgcttca 197 ||||||||||||||||||||| |||| Sbjct: 567 ggatgtcaagtgccagggctgtttca 592
>ref|NM_124167.2| Arabidopsis thaliana structural constituent of ribosome AT5G47930 mRNA, complete cds Length = 570 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 68 atggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaag 127 ||||||||||| ||||||||||| ||||| | ||||| | ||||| |||||| ||| Sbjct: 70 atggtgctccaaaacgacatcgatctccttcatccgccacctgagcttgagaagagaaag 129 Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 187 || ||| ||||| |||||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 130 cataagctcaagcgtctcgtgcaatctcccaactccttcttcatggatgttaagtgtcag 189 Query: 188 ggctgcttcaacataacgactgtgttcagccactctca 225 || |||||||||||||| |||||||||||||| ||||| Sbjct: 190 ggatgcttcaacataaccactgtgttcagccattctca 227
>gb|AY496101.1| Capsicum annuum hyom protein mRNA, complete cds Length = 431 Score = 115 bits (58), Expect = 1e-22 Identities = 79/86 (91%) Strand = Plus / Plus Query: 149 cagtcccccaactcgttcttcatggatgtcaagtgccagggctgcttcaacataacgact 208 ||||| |||||||| |||||||||||||| |||||||| |||||||| |||||||||||| Sbjct: 85 cagtctcccaactctttcttcatggatgtgaagtgccaaggctgctttaacataacgact 144 Query: 209 gtgttcagccactctcagaccgtggt 234 ||||||||||| |||||||| ||||| Sbjct: 145 gtgttcagccattctcagactgtggt 170
>gb|AY079419.1| Arabidopsis thaliana putative ribosomal protein S27 (At5g47930) mRNA, complete cds Length = 286 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 68 atggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaag 127 ||||||||||| ||||||||||| ||||| | ||||| | ||||| |||||| ||| Sbjct: 1 atggtgctccaaaacgacatcgatctccttcatccgccacctgagcttgagaagagaaag 60 Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 187 || ||| ||||| |||||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 61 cataagctcaagcgtctcgtgcaatctcccaactccttcttcatggatgttaagtgtcag 120 Query: 188 ggctgcttcaacataacgactgtgttcagccactctca 225 || |||||||||||||| |||||||||||||| ||||| Sbjct: 121 ggatgcttcaacataaccactgtgttcagccattctca 158
>gb|AY046032.1| Arabidopsis thaliana putative ribosomal protein S27 (At5g47930) mRNA, complete cds Length = 565 Score = 115 bits (58), Expect = 1e-22 Identities = 133/158 (84%) Strand = Plus / Plus Query: 68 atggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaag 127 ||||||||||| ||||||||||| ||||| | ||||| | ||||| |||||| ||| Sbjct: 70 atggtgctccaaaacgacatcgatctccttcatccgccacctgagcttgagaagagaaag 129 Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 187 || ||| ||||| |||||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 130 cataagctcaagcgtctcgtgcaatctcccaactccttcttcatggatgttaagtgtcag 189 Query: 188 ggctgcttcaacataacgactgtgttcagccactctca 225 || |||||||||||||| |||||||||||||| ||||| Sbjct: 190 ggatgcttcaacataaccactgtgttcagccattctca 227
>gb|DQ083187.1| Oryza sativa (indica cultivar-group) clone 5S2A05 mRNA sequence Length = 284 Score = 111 bits (56), Expect = 2e-21 Identities = 110/128 (85%) Strand = Plus / Plus Query: 188 ggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccgggc 247 |||||||||| ||| || ||||||||||||||||| ||||| |||||||| ||||||||| Sbjct: 1 ggctgcttcagcatcactactgtgttcagccactcccagacagtggtggtctgcccgggc 60 Query: 248 tgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctcc 307 ||||| || ||||| ||||| || || || |||||||| ||||| || ||||| || ||| Sbjct: 61 tgccaaaccgtgctttgccagcctacaggtggaaaggccaggctaacggaggggtgttcc 120 Query: 308 ttccgccg 315 |||||||| Sbjct: 121 ttccgccg 128
>ref|NM_130134.2| Arabidopsis thaliana structural constituent of ribosome AT2G45710 mRNA, complete cds Length = 545 Score = 109 bits (55), Expect = 7e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 110 gagctcgagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttc 169 |||||||||||| ||||||||| ||||| || || || || ||||| ||||| ||| Sbjct: 125 gagctcgagaagaggaagcacaagctcaagcgtcttgttcaatcacccaattcgtttttc 184 Query: 170 atggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactctcagacc 229 |||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 185 atggatgtcaagtgtcaaggctgctttaacattacgactgtgttcagccactctcagacc 244 Query: 230 gtggtggtgtg 240 || ||| |||| Sbjct: 245 gttgtgatgtg 255
>gb|BT000089.1| Arabidopsis thaliana putative ribosomal protein S27 (At2g45710) mRNA, complete cds Length = 311 Score = 109 bits (55), Expect = 7e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 110 gagctcgagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttc 169 |||||||||||| ||||||||| ||||| || || || || ||||| ||||| ||| Sbjct: 43 gagctcgagaagaggaagcacaagctcaagcgtcttgttcaatcacccaattcgtttttc 102 Query: 170 atggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactctcagacc 229 |||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 103 atggatgtcaagtgtcaaggctgctttaacattacgactgtgttcagccactctcagacc 162 Query: 230 gtggtggtgtg 240 || ||| |||| Sbjct: 163 gttgtgatgtg 173
>gb|AY072376.1| Arabidopsis thaliana putative ribosomal protein S27 (At2g45710) mRNA, complete cds Length = 485 Score = 109 bits (55), Expect = 7e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 110 gagctcgagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttc 169 |||||||||||| ||||||||| ||||| || || || || ||||| ||||| ||| Sbjct: 125 gagctcgagaagaggaagcacaagctcaagcgtcttgttcaatcacccaattcgtttttc 184 Query: 170 atggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactctcagacc 229 |||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 185 atggatgtcaagtgtcaaggctgctttaacattacgactgtgttcagccactctcagacc 244 Query: 230 gtggtggtgtg 240 || ||| |||| Sbjct: 245 gttgtgatgtg 255
>emb|BX821607.1|CNS0A87H Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL57ZG10 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 491 Score = 109 bits (55), Expect = 7e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 110 gagctcgagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttc 169 |||||||||||| ||||||||| ||||| || || || || ||||| ||||| ||| Sbjct: 106 gagctcgagaagaggaagcacaagctcaagcgtcttgttcaatcacccaattcgtttttc 165 Query: 170 atggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactctcagacc 229 |||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 166 atggatgtcaagtgtcaaggctgctttaacattacgactgtgttcagccactctcagacc 225 Query: 230 gtggtggtgtg 240 || ||| |||| Sbjct: 226 gttgtgatgtg 236
>gb|AY085824.1| Arabidopsis thaliana clone 18662 mRNA, complete sequence Length = 509 Score = 109 bits (55), Expect = 7e-21 Identities = 112/131 (85%) Strand = Plus / Plus Query: 110 gagctcgagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttc 169 |||||||||||| ||||||||| ||||| || || || || ||||| ||||| ||| Sbjct: 125 gagctcgagaagaggaagcacaagctcaagcgtcttgttcaatcacccaattcgtttttc 184 Query: 170 atggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactctcagacc 229 |||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 185 atggatgtcaagtgtcaaggctgctttaacattacgactgtgttcagccactctcagacc 244 Query: 230 gtggtggtgtg 240 || ||| |||| Sbjct: 245 gttgtgatgtg 255
>gb|DQ191664.1| Solanum tuberosum ribosomal protein S27-like protein mRNA, complete cds Length = 556 Score = 107 bits (54), Expect = 3e-20 Identities = 90/102 (88%) Strand = Plus / Plus Query: 158 aactcgttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttcagc 217 ||||| |||||||||||||| ||||||||||| ||||| |||||||| || ||||||||| Sbjct: 145 aactctttcttcatggatgtgaagtgccagggttgctttaacataacaacggtgttcagc 204 Query: 218 cactctcagaccgtggtggtgtgcccgggctgccagacggtg 259 ||||| ||||| |||||||||||| | ||||||||||||| Sbjct: 205 cactcgcagactgtggtggtgtgcgggaactgccagacggtg 246
>emb|BX833928.1|CNS0A0IU Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZH08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 491 Score = 107 bits (54), Expect = 3e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 68 atggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaag 127 ||||||||||| ||||||||||| ||||| | ||||| | ||||| |||||| ||| Sbjct: 47 atggtgctccaaaacgacatcgatctccttcatccgccacctgagcttgagaagagaaag 106 Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 187 || ||| ||||| || ||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 107 cataagctcaagcgtctggtgcaatctcccaactccttcttcatggatgttaagtgtcag 166 Query: 188 ggctgcttcaacataacgactgtgttcagccactctca 225 || |||||||||||||| |||||||||||||| ||||| Sbjct: 167 ggatgcttcaacataaccactgtgttcagccattctca 204
>emb|BX842073.1|CNS09Y9I Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL45ZE01 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 527 Score = 107 bits (54), Expect = 3e-20 Identities = 105/122 (86%) Strand = Plus / Plus Query: 110 gagctcgagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttc 169 |||||||||||| ||||||||| ||||| || || || || ||||| ||||| ||| Sbjct: 111 gagctcgagaagaggaagcacaagctcaagcgtcttgttcaatcacccaattcgtttttc 170 Query: 170 atggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactctcagacc 229 |||||||||||||| || |||||||| ||||| ||||||||||||||||||||||||||| Sbjct: 171 atggatgtcaagtgtcaaggctgctttaacattacgactgtgttcagccactctcagacc 230 Query: 230 gt 231 || Sbjct: 231 gt 232
>gb|AY088632.1| Arabidopsis thaliana clone 8698 mRNA, complete sequence Length = 539 Score = 107 bits (54), Expect = 3e-20 Identities = 132/158 (83%) Strand = Plus / Plus Query: 68 atggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaag 127 ||||||||||| || |||||||| ||||| | || || || ||||| |||||| ||| Sbjct: 71 atggtgctccaaaatgacatcgatctccttcatcctccagctgagcttgagaagagaaag 130 Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 187 || ||| ||||| |||||||| || |||||||| |||||||||||||| ||||| ||| Sbjct: 131 cataagctcaagcgtctcgtgcaatctcccaactccttcttcatggatgttaagtgtcag 190 Query: 188 ggctgcttcaacataacgactgtgttcagccactctca 225 || |||||||||||||| |||||||||||||| ||||| Sbjct: 191 ggatgcttcaacataaccactgtgttcagccattctca 228
>emb|X83694.1|CRRPS27 C.reinhardtii mRNA for ribosomal protein S27 Length = 673 Score = 105 bits (53), Expect = 1e-19 Identities = 71/77 (92%) Strand = Plus / Plus Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||||||||| ||||||||| |||||| ||||||||||||||||||||| ||||||||| Sbjct: 74 aagcacaagcggaagcgccttgtgcagagccccaactcgttcttcatggacgtcaagtgc 133 Query: 185 cagggctgcttcaacat 201 ||||||||||||||||| Sbjct: 134 cagggctgcttcaacat 150 Score = 42.1 bits (21), Expect = 1.3 Identities = 33/37 (89%) Strand = Plus / Plus Query: 293 accgagggatgctccttccgccggaagggtgactaag 329 |||||||| ||||| |||||||||||| | ||||||| Sbjct: 242 accgagggctgctctttccgccggaagagcgactaag 278
>gb|DQ241850.1| Solanum tuberosum clone 187G01 ribosomal protein S27-like protein-like mRNA, complete cds Length = 539 Score = 105 bits (53), Expect = 1e-19 Identities = 89/101 (88%) Strand = Plus / Plus Query: 159 actcgttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttcagcc 218 |||| |||||||||||||| ||||||||||| ||||| |||||||| || |||||||||| Sbjct: 155 actctttcttcatggatgtgaagtgccagggttgctttaacataacaacggtgttcagcc 214 Query: 219 actctcagaccgtggtggtgtgcccgggctgccagacggtg 259 |||| ||||| |||||||||||| | ||||||||||||| Sbjct: 215 actcacagactgtggtggtgtgcgggaactgccagacggtg 255
>ref|NM_115975.3| Arabidopsis thaliana ARS27A (ARABIDOPSIS RIBOSOMAL PROTEIN S27); structural constituent of ribosome AT3G61110 (ARS27A) mRNA, complete cds Length = 503 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/242 (80%) Strand = Plus / Plus Query: 65 aagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctc 124 |||||||| || || ||||| ||||| || || ||||| || || ||||| |||||| Sbjct: 62 aagatggttcttcaaaacgatatcgatctgcttaacccacctgctgagcttgagaagagg 121 Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||||||||| ||||| || || ||||| ||||| || |||||||||||||| |||||| Sbjct: 122 aagcacaagctcaagcgtcttgtccagtctcccaattccttcttcatggatgtgaagtgc 181 Query: 185 cagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccg 244 || |||||||||||||| || ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 182 caaggctgcttcaacatcactactgttttcagtcactcgcagactgttgtggtgtgcgga 241 Query: 245 ggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgc 304 ||||||||| | || ||||| || || || |||||||| | ||||||||| |||||| Sbjct: 242 aactgccagacaattctgtgccagcctacaggaggaaaggcaaagctcaccgaaggatgc 301 Query: 305 tc 306 || Sbjct: 302 tc 303
>gb|AF412053.1|AF412053 Arabidopsis thaliana AT3g61110/T27I15_200 mRNA, complete cds Length = 460 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/242 (80%) Strand = Plus / Plus Query: 65 aagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctc 124 |||||||| || || ||||| ||||| || || ||||| || || ||||| |||||| Sbjct: 58 aagatggttcttcaaaacgatatcgatctgcttaacccacctgctgagcttgagaagagg 117 Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||||||||| ||||| || || ||||| ||||| || |||||||||||||| |||||| Sbjct: 118 aagcacaagctcaagcgtcttgtccagtctcccaattccttcttcatggatgtgaagtgc 177 Query: 185 cagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccg 244 || |||||||||||||| || ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 178 caaggctgcttcaacatcactactgttttcagtcactcgcagactgttgtggtgtgcgga 237 Query: 245 ggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgc 304 ||||||||| | || ||||| || || || |||||||| | ||||||||| |||||| Sbjct: 238 aactgccagacaattctgtgccagcctacaggaggaaaggcaaagctcaccgaaggatgc 297 Query: 305 tc 306 || Sbjct: 298 tc 299
>emb|BX826085.1|CNS0A7J1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL83ZG11 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 443 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/242 (80%) Strand = Plus / Plus Query: 65 aagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctc 124 |||||||| || || ||||| ||||| || || ||||| || || ||||| |||||| Sbjct: 47 aagatggttcttcaaaacgatatcgatctgcttaacccacctgctgagcttgagaagagg 106 Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||||||||| ||||| || || ||||| ||||| || |||||||||||||| |||||| Sbjct: 107 aagcacaagctcaagcgtcttgtccagtctcccaattccttcttcatggatgtgaagtgc 166 Query: 185 cagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccg 244 || |||||||||||||| || ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 167 caaggctgcttcaacatcactactgttttcagtcactcgcagactgtagtggtgtgcgga 226 Query: 245 ggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgc 304 ||||||||| | || ||||| || || || |||||||| | ||||||||| |||||| Sbjct: 227 aactgccagacaattctgtgccagcctacaggaggaaaggcaaagctcaccgaaggatgc 286 Query: 305 tc 306 || Sbjct: 287 tc 288
>emb|BX826154.1|CNS0A7GK Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL88ZA07 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 410 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/242 (80%) Strand = Plus / Plus Query: 65 aagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctc 124 |||||||| || || ||||| ||||| || || ||||| || || ||||| |||||| Sbjct: 58 aagatggttcttcaaaacgatatcgatctgcttaacccacctgctgagcttgagaagagg 117 Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||||||||| ||||| || || ||||| ||||| || |||||||||||||| |||||| Sbjct: 118 aagcacaagctcaagcgtcttgtccagtctcccaattccttcttcatggatgtgaagtgc 177 Query: 185 cagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccg 244 || |||||||||||||| || ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 178 caaggctgcttcaacatcactactgttttcagtcactcgcagactgttgtggtgtgcgga 237 Query: 245 ggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgc 304 ||||||||| | || ||||| || || || |||||||| | ||||||||| |||||| Sbjct: 238 aactgccagacaattctgtgccagcctacaggaggaaaggcaaagctcaccgaaggatgc 297 Query: 305 tc 306 || Sbjct: 298 tc 299
>emb|BX822118.1|CNS0A651 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB14ZD10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 469 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/242 (80%) Strand = Plus / Plus Query: 65 aagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctc 124 |||||||| || || ||||| ||||| || || ||||| || || ||||| |||||| Sbjct: 62 aagatggttcttcaaaacgatatcgatctgcttaacccacctgctgagcttgagaagagg 121 Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||| |||||| ||||| || || ||||| ||||| || |||||||||||||| |||||| Sbjct: 122 aagaacaagatcaagcgtcttgtccagtctcccaattccttcttcatggatgtgaagtgc 181 Query: 185 cagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccg 244 || |||||||||||||| || ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 182 caaggctgcttcaacatcactactgttttcagtcactcgcagactgttgtggtgtgcgga 241 Query: 245 ggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgc 304 ||||||||| | || ||||| || || || |||||||| | ||||||||| |||||| Sbjct: 242 aactgccagacaattctgtgccagcctacaggaggaaaggcaaagctcaccgaaggatgc 301 Query: 305 tc 306 || Sbjct: 302 tc 303
>emb|BX825852.1|CNS0A57Q Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL68ZA12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 502 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/242 (80%) Strand = Plus / Plus Query: 65 aagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctc 124 |||||||| || || ||||| ||||| || || ||||| || || ||||| |||||| Sbjct: 60 aagatggttcttcaaaacgatatcgatctgcttaacccacctgctgagcttgagaagagg 119 Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||||||||| ||||| || || ||||| ||||| || |||||||||||||| |||||| Sbjct: 120 aagcacaagctcaagcgtcttgtccagtctcccaattccttcttcatggatgtgaagtgc 179 Query: 185 cagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccg 244 || |||||||||||||| || ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 180 caaggctgcttcaacatcactactgttttcagtcactcgcagactgttgtggtgtgcgga 239 Query: 245 ggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgc 304 ||||||||| | || ||||| || || || |||||||| | ||||||||| |||||| Sbjct: 240 aactgccagacaattctgtgccagcctacaggaggaaaggcaaagctcaccgaaggatgc 299 Query: 305 tc 306 || Sbjct: 300 tc 301
>gb|AF083336.1|AF083336 Arabidopsis thaliana ribosomal protein S27 (ARS27A) mRNA, complete cds Length = 474 Score = 99.6 bits (50), Expect = 6e-18 Identities = 194/242 (80%) Strand = Plus / Plus Query: 65 aagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctc 124 |||||||| || || ||||| ||||| || || ||||| || || ||||| |||||| Sbjct: 61 aagatggttcttcaaaacgatatcgatctgcttaacccacctgctgagcttgagaagagg 120 Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||||||||| ||||| || || ||||| ||||| || |||||||||||||| |||||| Sbjct: 121 aagcacaagctcaagcgtcttgtccagtctcccaattccttcttcatggatgtgaagtgc 180 Query: 185 cagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccg 244 || |||||||||||||| || ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 181 caaggctgcttcaacatcactactgttttcagtcactcgcagactgttgtggtgtgcgga 240 Query: 245 ggctgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgc 304 ||||||||| | || ||||| || || || |||||||| | ||||||||| |||||| Sbjct: 241 aactgccagacaattctgtgccagcctacaggaggaaaggcaaagctcaccgaaggatgc 300 Query: 305 tc 306 || Sbjct: 301 tc 302
>emb|BX842135.1|CNS09YC8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS49ZB07 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 436 Score = 97.6 bits (49), Expect = 3e-17 Identities = 145/177 (81%) Strand = Plus / Plus Query: 65 aagatggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctc 124 |||||||| || || ||||| ||||| || || ||||| || || ||||| |||||| Sbjct: 47 aagatggttcttcaaaacgatatcgatctgcttaacccacctgctgagcttgagaagagg 106 Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||||||||| ||||| || || ||||| ||||| || |||||||||||||| |||||| Sbjct: 107 aagcacaagctcaagcgtcttgtccagtctcccaattccttcttcatggatgtgaagtgc 166 Query: 185 cagggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgc 241 || |||||||||||||| || ||||| ||||| ||||| ||||| || ||||||||| Sbjct: 167 caaggctgcttcaacatcactactgttttcagtcactcgcagactgttgtggtgtgc 223
>emb|AJ276024.1|MGA276024 Meleagris gallopavo partial mRNA for metallopanstimulin 1 (mps1 gene) Length = 153 Score = 95.6 bits (48), Expect = 1e-16 Identities = 99/116 (85%) Strand = Plus / Plus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| ||||||||||||||||||||| |||||| ||||||||| | ||||||||| Sbjct: 13 gagaagcgcaagcacaagaagaagcgcctggtgcagagccccaactcctacttcatggac 72 Query: 176 gtcaagtgccagggctgcttcaacataacgactgtgttcagccactctcagaccgt 231 |||||||||| ||||||| || || || || |||||||||||| | |||||||| Sbjct: 73 gtcaagtgcccaggctgctataaaatcaccaccgtgttcagccacgcgcagaccgt 128
>gb|AY090259.1| Arabidopsis thaliana AT3g61110/T27I15_200 mRNA, complete cds Length = 261 Score = 93.7 bits (47), Expect = 4e-16 Identities = 182/227 (80%) Strand = Plus / Plus Query: 80 aacgacatcgacctcctcaacccgccggcggagctcgagaagctcaagcacaagaagaag 139 ||||| ||||| || || ||||| || || ||||| |||||| ||||||||| ||| Sbjct: 13 aacgatatcgatctgcttaacccacctgctgagcttgagaagaggaagcacaagctcaag 72 Query: 140 cgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccagggctgcttcaac 199 || || || ||||| ||||| || |||||||||||||| |||||||| |||||||||||| Sbjct: 73 cgtcttgtccagtctcccaattccttcttcatggatgtgaagtgccaaggctgcttcaac 132 Query: 200 ataacgactgtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtg 259 || || ||||| ||||| ||||| ||||| || ||||||||| ||||||||| | Sbjct: 133 atcactactgttttcagtcactcgcagactgttgtggtgtgcggaaactgccagacaatt 192 Query: 260 ctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctc 306 || ||||| || || || |||||||| | ||||||||| |||||||| Sbjct: 193 ctgtgccagcctacaggaggaaaggcaaagctcaccgaaggatgctc 239
>emb|BX825631.1|CNS0A7MP Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL50ZH12 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 452 Score = 91.7 bits (46), Expect = 2e-15 Identities = 130/158 (82%) Strand = Plus / Plus Query: 149 cagtcccccaactcgttcttcatggatgtcaagtgccagggctgcttcaacataacgact 208 ||||| ||||| || |||||||||||||| |||||||| |||||||||||||| || ||| Sbjct: 140 cagtctcccaattccttcttcatggatgttaagtgccaaggctgcttcaacatcactact 199 Query: 209 gtgttcagccactctcagaccgtggtggtgtgcccgggctgccagacggtgctctgccaa 268 || ||||| ||||| ||||| || ||||||||| ||||||||| | || ||||| Sbjct: 200 gttttcagtcactcgcagactgttgtggtgtgcggaaactgccagacaattctgtgccag 259 Query: 269 cccaccggcggaaaggcgaggctcaccgagggatgctc 306 || || || |||||||| | ||||||||| |||||||| Sbjct: 260 cctacaggaggaaaggcaaagctcaccgaaggatgctc 297
>emb|BX841619.1|CNS09YLN Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB23ZF10 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 489 Score = 91.7 bits (46), Expect = 2e-15 Identities = 130/158 (82%) Strand = Plus / Plus Query: 68 atggtgctccagaacgacatcgacctcctcaacccgccggcggagctcgagaagctcaag 127 ||||||||||| ||||||||||| ||||| | ||||| | ||||| |||||| ||| Sbjct: 58 atggtgctccaaaacgacatcgatctccttcatccgccacctgagcttgagaagagaaag 117 Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 187 || ||| ||||| || ||||| || |||||||| |||||||||||||| |||| ||| Sbjct: 118 cataagctcaagcgtctggtgcaatctcccaactccttcttcatggatgttaagtttcag 177 Query: 188 ggctgcttcaacataacgactgtgttcagccactctca 225 || |||||||||||||| ||||| |||||||| ||||| Sbjct: 178 ggatgcttcaacataaccactgttttcagccattctca 215
>ref|XM_657289.1| Aspergillus nidulans FGSC A4 40S ribosomal protein S27 (AN4777.2), mRNA Length = 249 Score = 79.8 bits (40), Expect = 6e-12 Identities = 124/152 (81%) Strand = Plus / Plus Query: 164 ttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactct 223 ||||| |||||||||||||||| |||||||||||||| || || || ||| |||| | Sbjct: 91 ttctttatggatgtcaagtgccccggctgcttcaacatcaccaccgtcttctcccacgcc 150 Query: 224 cagaccgtggtggtgtgcccgggctgccagacggtgctctgccaacccaccggcggaaag 283 |||||||| || |||||| | |||||| || || |||||||| |||||||| || ||| Sbjct: 151 cagaccgtcgttgtgtgctccggctgctctactgtcctctgccagcccaccggtggcaag 210 Query: 284 gcgaggctcaccgagggatgctccttccgccg 315 || | ||||||||||| ||||| |||||||| Sbjct: 211 gcccgtctcaccgagggctgctctttccgccg 242
>gb|AY107723.1| Zea mays PCO067113 mRNA sequence Length = 1219 Score = 79.8 bits (40), Expect = 6e-12 Identities = 90/104 (86%), Gaps = 7/104 (6%) Strand = Plus / Plus Query: 84 acatcgacctcctcaacccgccggcggagctcgagaagctcaagcacaagaagaagcgcc 143 |||||||||| | |||||||||||| ||||| |||||||||||||| |||||| ||| Sbjct: 635 acatcgaccttcccaacccgccggcagagcttaagaagctcaagcac---aagaagtgcc 691 Query: 144 tcgtgcagt-cccccaactcgttcttcatggatgtcaagtgcca 186 |||| |||| |||||||||| ||||||||||||||||||||| Sbjct: 692 tcgtccagtccccccaactc---cttcatggatgtcaagtgcca 732
>emb|BX830035.1|CNS0A269 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB54ZG09 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 493 Score = 77.8 bits (39), Expect = 2e-11 Identities = 72/83 (86%) Strand = Plus / Plus Query: 143 ctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccagggctgcttcaacata 202 ||||||||||| |||||||| |||||||||||||| |||| ||| |||||||||||| Sbjct: 121 ctcgtgcagtctcccaactccttcttcatggatgtgaagtataaggaatgcttcaacata 180 Query: 203 acgactgtgttcagccactctca 225 || ||||| |||||||| ||||| Sbjct: 181 accactgtattcagccattctca 203
>ref|XM_413758.1| PREDICTED: Gallus gallus similar to 40S ribosomal protein S27 (LOC415372), mRNA Length = 788 Score = 75.8 bits (38), Expect = 9e-11 Identities = 92/110 (83%) Strand = Plus / Plus Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||||||||||||||||| | |||||| ||||||||| | ||||||||| || |||||| Sbjct: 316 aagcacaagaagaagcgtttggtgcagagccccaactcctacttcatggacgtgaagtgc 375 Query: 185 cagggctgcttcaacataacgactgtgttcagccactctcagaccgtggt 234 | || |||| ||| || || ||||||||||||||| ||||||| ||||| Sbjct: 376 ccaggatgctacaagatcaccactgtgttcagccacgctcagacagtggt 425
>gb|AY310774.1| Nicotiana benthamiana clone 8-152 unknown mRNA Length = 407 Score = 75.8 bits (38), Expect = 9e-11 Identities = 71/82 (86%) Strand = Plus / Plus Query: 153 cccccaactcgttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgt 212 |||| ||||| ||||||| |||||| |||| ||| |||||||| |||||||| || |||| Sbjct: 5 cccctaactctttcttcaaggatgttaagtcccaaggctgctttaacataacaaccgtgt 64 Query: 213 tcagccactctcagaccgtggt 234 ||||||| |||||||| ||||| Sbjct: 65 tcagccattctcagacggtggt 86
>emb|CR354006.1| Gallus gallus finished cDNA, clone ChEST641j16 Length = 496 Score = 75.8 bits (38), Expect = 9e-11 Identities = 92/110 (83%) Strand = Plus / Plus Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||||||||||||||||| | |||||| ||||||||| | ||||||||| || |||||| Sbjct: 128 aagcacaagaagaagcgtttggtgcagagccccaactcctacttcatggacgtgaagtgc 187 Query: 185 cagggctgcttcaacataacgactgtgttcagccactctcagaccgtggt 234 | || |||| ||| || || ||||||||||||||| ||||||| ||||| Sbjct: 188 ccaggatgctacaagatcaccactgtgttcagccacgctcagacagtggt 237
>emb|BX822353.1|CNS0A7M9 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB30ZB08 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 409 Score = 75.8 bits (38), Expect = 9e-11 Identities = 68/78 (87%) Strand = Plus / Plus Query: 164 ttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactct 223 |||||||||||||| |||||||| |||||||||||||| || ||||| ||||| |||| Sbjct: 118 ttcttcatggatgttaagtgccaaggctgcttcaacatcactactgttttcagttactcg 177 Query: 224 cagaccgtggtggtgtgc 241 ||||| || ||||||||| Sbjct: 178 cagactgttgtggtgtgc 195
>emb|BX934988.1| Gallus gallus finished cDNA, clone ChEST190b21 Length = 539 Score = 75.8 bits (38), Expect = 9e-11 Identities = 92/110 (83%) Strand = Plus / Plus Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 ||||||||||||||||| | |||||| ||||||||| | ||||||||| || |||||| Sbjct: 66 aagcacaagaagaagcgtttggtgcagagccccaactcctacttcatggacgtgaagtgc 125 Query: 185 cagggctgcttcaacataacgactgtgttcagccactctcagaccgtggt 234 | || |||| ||| || || ||||||||||||||| ||||||| ||||| Sbjct: 126 ccaggatgctacaagatcaccactgtgttcagccacgctcagacagtggt 175
>ref|XM_850032.1| PREDICTED: Canis familiaris similar to ribosomal protein S27 (LOC612291), mRNA Length = 543 Score = 71.9 bits (36), Expect = 1e-09 Identities = 81/96 (84%) Strand = Plus / Plus Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 |||||||||||||||||||| |||||| ||||||||| | ||||||||| || |||||| Sbjct: 79 aagcacaagaagaagcgcctggtgcagagccccaactcctacttcatggacgttaagtgc 138 Query: 185 cagggctgcttcaacataacgactgtgttcagccac 220 | ||| |||| ||| || || || || ||||||||| Sbjct: 139 ccgggatgctacaaaatcaccaccgtcttcagccac 174
>ref|XM_547571.2| PREDICTED: Canis familiaris similar to 40S ribosomal protein S27-like protein (LOC490449), mRNA Length = 355 Score = 69.9 bits (35), Expect = 6e-09 Identities = 80/95 (84%) Strand = Plus / Plus Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgc 184 |||||||||||||||||||| |||||| ||||||||| | ||||||||| || |||||| Sbjct: 79 aagcacaagaagaagcgcctggtgcagagccccaactcctacttcatggacgtgaagtgc 138 Query: 185 cagggctgcttcaacataacgactgtgttcagcca 219 | ||| |||| ||| || || || || |||||||| Sbjct: 139 ccgggatgctacaaaatcaccaccgtcttcagcca 173 Score = 40.1 bits (20), Expect = 5.1 Identities = 50/60 (83%) Strand = Plus / Plus Query: 260 ctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccgccggaag 319 |||||||| ||||| || ||||| || ||||| || || |||||||||||| | |||||| Sbjct: 214 ctctgccagcccacgggaggaaaagcaaggcttacagaaggatgctccttcaggcggaag 273
>ref|XM_778943.1| PREDICTED: Strongylocentrotus purpuratus similar to 40S ribosomal protein S27-like protein (LOC578794), mRNA Length = 641 Score = 65.9 bits (33), Expect = 9e-08 Identities = 78/93 (83%) Strand = Plus / Plus Query: 127 gcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgcca 186 ||||||||||||||| || |||||| || ||||| | |||||||||||| ||||||| Sbjct: 67 gcacaagaagaagcgtcttgtgcagagtcctaactcatacttcatggatgtgaagtgccc 126 Query: 187 gggctgcttcaacataacgactgtgttcagcca 219 ||||||| ||| || || |||||||||||||| Sbjct: 127 aggctgctacaagatcacaactgtgttcagcca 159
>ref|XM_960665.1| Neurospora crassa OR74A 40S RIBOSOMAL PROTEIN S27 (NCU00618.1) partial mRNA Length = 249 Score = 63.9 bits (32), Expect = 4e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 164 ttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactct 223 ||||||||||| |||||||||| |||||||||| ||| || ||||| ||| |||| | Sbjct: 91 ttcttcatggacgtcaagtgccccggctgcttcaccatcaccactgtcttctcccacgcc 150 Query: 224 cagaccgtggtggtgtgcccgggctgccagacggtgctctgccaacccaccggcggaaag 283 |||||||| || | |||| ||||||| || || || ||||| |||||||| || ||| Sbjct: 151 cagaccgtcgtcatctgccagggctgcaccactgtcctttgccagcccaccggtggtaag 210 Query: 284 gcgaggctcaccgagggatgctccttccgccg 315 || | ||||||||||| ||||| |||||||| Sbjct: 211 gctcgcctcaccgagggctgctctttccgccg 242
>ref|XM_324797.1| Neurospora crassa OR74A 40S RIBOSOMAL PROTEIN S27 (NCU00618.1) partial mRNA Length = 249 Score = 63.9 bits (32), Expect = 4e-07 Identities = 122/152 (80%) Strand = Plus / Plus Query: 164 ttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactct 223 ||||||||||| |||||||||| |||||||||| ||| || ||||| ||| |||| | Sbjct: 91 ttcttcatggacgtcaagtgccccggctgcttcaccatcaccactgtcttctcccacgcc 150 Query: 224 cagaccgtggtggtgtgcccgggctgccagacggtgctctgccaacccaccggcggaaag 283 |||||||| || | |||| ||||||| || || || ||||| |||||||| || ||| Sbjct: 151 cagaccgtcgtcatctgccagggctgcaccactgtcctttgccagcccaccggtggtaag 210 Query: 284 gcgaggctcaccgagggatgctccttccgccg 315 || | ||||||||||| ||||| |||||||| Sbjct: 211 gctcgcctcaccgagggctgctctttccgccg 242
>ref|XM_752689.1| Ustilago maydis 521 hypothetical protein (UM01635.1) partial mRNA Length = 279 Score = 63.9 bits (32), Expect = 4e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 137 aagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccagggctgcttc 196 ||||| || |||||| ||||||||||||||||||||| |||||||||| ||||||||| Sbjct: 91 aagcgacttgtgcagaaccccaactcgttcttcatggacgtcaagtgccctggctgcttc 150
>gb|AC008367.5| Drosophila melanogaster clone BACR10P10, complete sequence Length = 176231 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| |||||||||| ||||||||| || ||| ||||||||||| ||||||||| Sbjct: 166505 gagaagcgcaagcacaagctgaagcgcctggtccagcaccccaactcgtacttcatggac 166564 Query: 176 gtcaagtgccagggctgct 194 || ||||||| ||||||| Sbjct: 166565 gtgaagtgccccggctgct 166583
>gb|AY232000.1| Drosophila yakuba clone yak-ad_CG10423 mRNA sequence Length = 252 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| |||||||||| ||||||||| || ||| ||||||||||| ||||||||| Sbjct: 43 gagaagcgcaagcacaagctgaagcgcctggtccagcaccccaactcgtacttcatggac 102 Query: 176 gtcaagtgccagggctgct 194 || ||||||| ||||||| Sbjct: 103 gtgaagtgccccggctgct 121
>gb|AY231814.1| Drosophila yakuba clone yak-em_CG10423 mRNA sequence Length = 252 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| |||||||||| ||||||||| || ||| ||||||||||| ||||||||| Sbjct: 43 gagaagcgcaagcacaagctgaagcgcctggtccagcaccccaactcgtacttcatggac 102 Query: 176 gtcaagtgccagggctgct 194 || ||||||| ||||||| Sbjct: 103 gtgaagtgccccggctgct 121
>gb|AY118959.1| Drosophila melanogaster LD37859 full insert cDNA Length = 733 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| |||||||||| ||||||||| || ||| ||||||||||| ||||||||| Sbjct: 105 gagaagcgcaagcacaagctgaagcgcctggtccagcaccccaactcgtacttcatggac 164 Query: 176 gtcaagtgccagggctgct 194 || ||||||| ||||||| Sbjct: 165 gtgaagtgccccggctgct 183
>ref|NM_143102.1| Drosophila melanogaster Ribosomal protein S27 CG10423-RA (RpS27), mRNA Length = 718 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Plus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| |||||||||| ||||||||| || ||| ||||||||||| ||||||||| Sbjct: 105 gagaagcgcaagcacaagctgaagcgcctggtccagcaccccaactcgtacttcatggac 164 Query: 176 gtcaagtgccagggctgct 194 || ||||||| ||||||| Sbjct: 165 gtgaagtgccccggctgct 183
>gb|AC008207.3|AC008207 Drosophila melanogaster, chromosome 3R, region 96C-96D, BAC clone BACR17E12, complete sequence Length = 184887 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| |||||||||| ||||||||| || ||| ||||||||||| ||||||||| Sbjct: 141240 gagaagcgcaagcacaagctgaagcgcctggtccagcaccccaactcgtacttcatggac 141181 Query: 176 gtcaagtgccagggctgct 194 || ||||||| ||||||| Sbjct: 141180 gtgaagtgccccggctgct 141162
>gb|AC008208.5|AC008208 Drosophila melanogaster, chromosome 3R, region 96D-96D, BAC clone BACR06L08, complete sequence Length = 170220 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| |||||||||| ||||||||| || ||| ||||||||||| ||||||||| Sbjct: 77182 gagaagcgcaagcacaagctgaagcgcctggtccagcaccccaactcgtacttcatggac 77123 Query: 176 gtcaagtgccagggctgct 194 || ||||||| ||||||| Sbjct: 77122 gtgaagtgccccggctgct 77104
>gb|BT003610.1| Drosophila melanogaster GH19261 full insert cDNA Length = 2708 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| |||||||||| ||||||||| || ||| ||||||||||| ||||||||| Sbjct: 611 gagaagcgcaagcacaagctgaagcgcctggtccagcaccccaactcgtacttcatggac 552 Query: 176 gtcaagtgccagggctgct 194 || ||||||| ||||||| Sbjct: 551 gtgaagtgccccggctgct 533
>gb|AE003751.3| Drosophila melanogaster chromosome 3R, section 89 of 118 of the complete sequence Length = 307443 Score = 61.9 bits (31), Expect = 1e-06 Identities = 67/79 (84%) Strand = Plus / Minus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| |||||||||| ||||||||| || ||| ||||||||||| ||||||||| Sbjct: 80918 gagaagcgcaagcacaagctgaagcgcctggtccagcaccccaactcgtacttcatggac 80859 Query: 176 gtcaagtgccagggctgct 194 || ||||||| ||||||| Sbjct: 80858 gtgaagtgccccggctgct 80840
>gb|AF101312.2| Caenorhabditis elegans cosmid F56E10, complete sequence Length = 41184 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Minus Query: 260 ctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccgc 313 |||||||| || ||| | |||||||| | ||||||||||||||||||||||||| Sbjct: 38013 ctctgccagccaacccgaggaaaggccaagctcaccgagggatgctccttccgc 37960
>gb|AC004665.3| Arabidopsis thaliana chromosome 2 clone F4I18 map CIC02E07, complete sequence Length = 101647 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Minus Query: 203 acgactgtgttcagccactctcagaccgtggtggtgtg 240 ||||||||||||||||||||||||||||| ||| |||| Sbjct: 95036 acgactgtgttcagccactctcagaccgttgtgatgtg 94999
>gb|AC003680.3| Arabidopsis thaliana chromosome 2 BAC F17K2 genomic sequence, complete sequence Length = 91854 Score = 60.0 bits (30), Expect = 6e-06 Identities = 36/38 (94%) Strand = Plus / Plus Query: 203 acgactgtgttcagccactctcagaccgtggtggtgtg 240 ||||||||||||||||||||||||||||| ||| |||| Sbjct: 85224 acgactgtgttcagccactctcagaccgttgtgatgtg 85261
>ref|NM_070733.3| Caenorhabditis elegans Ribosomal Protein, Small subunit family member (rps-27) (rps-27) mRNA, complete cds Length = 364 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 260 ctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccgc 313 |||||||| || ||| | |||||||| | ||||||||||||||||||||||||| Sbjct: 222 ctctgccagccaacccgaggaaaggccaagctcaccgagggatgctccttccgc 275
>dbj|AU066514.1| Chlamydomonas sp. HS-5 mRNA for ribosomal protein S27, NaCl inducible, complete cds, clone:NaEX96-53 Length = 593 Score = 60.0 bits (30), Expect = 6e-06 Identities = 48/54 (88%) Strand = Plus / Plus Query: 143 ctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccagggctgcttc 196 ||||||||||| |||||||| | ||| ||||| |||||||||| |||||||||| Sbjct: 159 ctcgtgcagtctcccaactcatactttatggacgtcaagtgcccgggctgcttc 212
>gb|BC087764.1| Xenopus tropicalis cDNA clone IMAGE:7006006 Length = 439 Score = 58.0 bits (29), Expect = 2e-05 Identities = 146/185 (78%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 187 ||||||||||||||||| || ||| ||| ||||| | ||||||||| || || |||| Sbjct: 51 cacaagaagaagcgcctggtccagagcccaaactcctacttcatggacgtaaaatgccca 110 Query: 188 ggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtgcccgggc 247 || |||| ||| || || || |||||||| ||| ||||||| ||||| |||| |||| Sbjct: 111 ggttgctacaagatcaccacggtgttcagtcacgctcagacggtggtactgtgtgtgggc 170 Query: 248 tgccagacggtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctcc 307 ||| ||||| || || || |||||||| || ||||| |||||||| || ||||| ||| Sbjct: 171 tgctccacggtcctgtgtcagcccaccgggggcaaggcaaggctcacagaaggatgttcc 230 Query: 308 ttccg 312 ||||| Sbjct: 231 ttccg 235
>ref|XM_366796.1| Magnaporthe grisea 70-15 chromosome VII hypothetical protein (MG02872.4) partial mRNA Length = 249 Score = 58.0 bits (29), Expect = 2e-05 Identities = 119/149 (79%) Strand = Plus / Plus Query: 164 ttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactct 223 ||||||||||| |||||||||| ||||||||||| ||| || || || ||| ||| | Sbjct: 91 ttcttcatggacgtcaagtgcccgggctgcttcaccatcaccaccgttttctcgcacgcc 150 Query: 224 cagaccgtggtggtgtgcccgggctgccagacggtgctctgccaacccaccggcggaaag 283 |||||||| || | |||| ||||||| ||| || || |||||||| ||||| |||||| Sbjct: 151 cagaccgtcgtcatctgccagggctgcacgaccgtcctttgccaaccgaccggtggaaag 210 Query: 284 gcgaggctcaccgagggatgctccttccg 312 || | || |||||||| ||||| ||||| Sbjct: 211 gcccgcctgaccgagggctgctcgttccg 239
>gb|AY826147.1| Aedes albopictus clone AL_22 ribosomal protein S27 mRNA, complete cds Length = 255 Score = 56.0 bits (28), Expect = 9e-05 Identities = 124/156 (79%) Strand = Plus / Plus Query: 158 aactcgttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttcagc 217 ||||||| ||||||||| |||||||||| || |||| ||| || ||||| ||||||||| Sbjct: 85 aactcgtacttcatggacgtcaagtgccccggatgctacaaaatcacgaccgtgttcagc 144 Query: 218 cactctcagaccgtggtggtgtgcccgggctgccagacggtgctctgccaacccaccggc 277 || | |||| ||| || || ||| | || || |||| | || ||||| ||||| || Sbjct: 145 catgcccagagcgtcgtagtttgcaccggttgttcgacgatcctgtgccagcccacgggt 204 Query: 278 ggaaaggcgaggctcaccgagggatgctccttccgc 313 |||||||| ||||||| ||||||||||| |||||| Sbjct: 205 ggaaaggcccggctcacggagggatgctcgttccgc 240
>gb|AY431527.1| Aedes aegypti ASAP ID: 34651 cytosolic small ribosomal subunit S27 mRNA sequence Length = 666 Score = 56.0 bits (28), Expect = 9e-05 Identities = 85/104 (81%) Strand = Plus / Plus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| |||||||||| ||||||||| || | | ||||| |||| ||||||||| Sbjct: 192 gagaagcgcaagcacaagctgaagcgcctggttccgcatcccaattcgtacttcatggac 251 Query: 176 gtcaagtgccagggctgcttcaacataacgactgtgttcagcca 219 |||||||||| || |||| ||| || ||||| ||||||||||| Sbjct: 252 gtcaagtgccccggatgctacaaaattacgaccgtgttcagcca 295
>gb|DQ440236.1| Aedes aegypti clone AET-2839 40S ribosomal protein S27 mRNA, complete cds Length = 255 Score = 56.0 bits (28), Expect = 9e-05 Identities = 85/104 (81%) Strand = Plus / Plus Query: 116 gagaagctcaagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggat 175 ||||||| |||||||||| ||||||||| || | | ||||| |||| ||||||||| Sbjct: 43 gagaagcgcaagcacaagctgaagcgcctggttccgcatcccaattcgtacttcatggac 102 Query: 176 gtcaagtgccagggctgcttcaacataacgactgtgttcagcca 219 |||||||||| || |||| ||| || ||||| ||||||||||| Sbjct: 103 gtcaagtgccccggatgctacaaaattacgaccgtgttcagcca 146 Score = 46.1 bits (23), Expect = 0.083 Identities = 44/51 (86%) Strand = Plus / Plus Query: 263 tgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccgc 313 ||||| ||||| || |||||||| ||||||| ||||||||||| |||||| Sbjct: 190 tgccagcccacgggaggaaaggcccggctcacggagggatgctcgttccgc 240
>ref|XM_849697.1| PREDICTED: Canis familiaris similar to ribosomal protein S27 (LOC611978), mRNA Length = 348 Score = 52.0 bits (26), Expect = 0.001 Identities = 44/50 (88%) Strand = Plus / Plus Query: 125 aagcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatgga 174 |||||||||||||||| ||| |||||| ||||||||| | ||||||||| Sbjct: 49 aagcacaagaagaagcacctggtgcagagccccaactcctacttcatgga 98
>gb|BC115179.1| Danio rerio cDNA clone IMAGE:7246883 Length = 889 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Minus Query: 127 gcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaa 180 ||||||||||||||| ||||| ||| ||||||||| | |||||||||||||| Sbjct: 491 gcacaagaagaagcgtctcgtacagagccccaactcttatttcatggatgtcaa 438
>emb|AJ843082.1| Platichthys flesus mRNA for 40S ribosomal protein S27 (rps27 gene) Length = 501 Score = 52.0 bits (26), Expect = 0.001 Identities = 92/114 (80%) Strand = Plus / Plus Query: 127 gcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgcca 186 ||||||||||||||| ||||| ||| || ||||| | ||| |||||||| ||||| | Sbjct: 84 gcacaagaagaagcgtctcgtccagagtccaaactcctactttatggatgtgaagtgtcc 143 Query: 187 gggctgcttcaacataacgactgtgttcagccactctcagaccgtggtggtgtg 240 || || | ||| || ||||| |||||||||||| ||||||| |||||| |||| Sbjct: 144 aggatgttacaagatcacgacggtgttcagccacgctcagacagtggtgctgtg 197
>gb|AF402836.1| Ictalurus punctatus 40S ribosomal protein S27-1 mRNA, complete cds Length = 512 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 127 gcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaa 180 ||||||||||||||| ||||| ||| ||| ||||| | ||||||||||||||| Sbjct: 64 gcacaagaagaagcggctcgtccagagcccaaactcttacttcatggatgtcaa 117
>dbj|AB226163.1| Aspergillus oryzae cDNA, contig sequence: AoEST3021 Length = 1065 Score = 52.0 bits (26), Expect = 0.001 Identities = 119/150 (79%) Strand = Plus / Plus Query: 164 ttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactct 223 ||||||||||| |||||||||| |||||||||| ||| || || || ||| |||| | Sbjct: 194 ttcttcatggacgtcaagtgccccggctgcttcaccatcaccaccgttttctcccacgcc 253 Query: 224 cagaccgtggtggtgtgcccgggctgccagacggtgctctgccaacccaccggcggaaag 283 |||||||| || || ||| | || ||| ||| || |||||||| |||||||| || ||| Sbjct: 254 cagaccgtcgtcgtctgcgccggttgctcgaccgtcctctgccagcccaccggtggcaag 313 Query: 284 gcgaggctcaccgagggatgctccttccgc 313 || | ||||| ||||| ||||| |||||| Sbjct: 314 gcccgtctcactgagggctgctctttccgc 343
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 52.0 bits (26), Expect = 0.001 Identities = 119/150 (79%) Strand = Plus / Plus Query: 164 ttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactct 223 ||||||||||| |||||||||| |||||||||| ||| || || || ||| |||| | Sbjct: 833198 ttcttcatggacgtcaagtgccccggctgcttcaccatcaccaccgttttctcccacgcc 833257 Query: 224 cagaccgtggtggtgtgcccgggctgccagacggtgctctgccaacccaccggcggaaag 283 |||||||| || || ||| | || ||| ||| || |||||||| |||||||| || ||| Sbjct: 833258 cagaccgtcgtcgtctgcgccggttgctcgaccgtcctctgccagcccaccggtggcaag 833317 Query: 284 gcgaggctcaccgagggatgctccttccgc 313 || | ||||| ||||| ||||| |||||| Sbjct: 833318 gcccgtctcactgagggctgctctttccgc 833347
>ref|XM_704683.1| PREDICTED: Danio rerio zgc:109888, transcript variant 2 (zgc:109888), mRNA Length = 831 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 127 gcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaa 180 ||||||||||||||| ||||| ||| ||||||||| | |||||||||||||| Sbjct: 87 gcacaagaagaagcgtctcgtacagagccccaactcttatttcatggatgtcaa 140
>ref|XM_678730.1| PREDICTED: Danio rerio zgc:109888, transcript variant 1 (zgc:109888), mRNA Length = 836 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 127 gcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaa 180 ||||||||||||||| ||||| ||| ||||||||| | |||||||||||||| Sbjct: 92 gcacaagaagaagcgtctcgtacagagccccaactcttatttcatggatgtcaa 145
>ref|NM_001021121.1| Schizosaccharomyces pombe 972h- 40S ribosomal protein S27 (SPBC1685.10), partial mRNA Length = 252 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 164 ttcttcatggatgtcaagtgccagggctgcttcaacat 201 |||||||||||||||||||||| || ||||||||||| Sbjct: 91 ttcttcatggatgtcaagtgccctggatgcttcaacat 128
>gb|AF045155.2|AF045155 Schizosaccharomyces pombe ribosomal protein S27 (rps27) mRNA, complete cds Length = 307 Score = 52.0 bits (26), Expect = 0.001 Identities = 35/38 (92%) Strand = Plus / Plus Query: 164 ttcttcatggatgtcaagtgccagggctgcttcaacat 201 |||||||||||||||||||||| || ||||||||||| Sbjct: 84 ttcttcatggatgtcaagtgccctggatgcttcaacat 121
>gb|BC095031.1| Danio rerio zgc:109888, transcript variant 1, mRNA (cDNA clone MGC:109888 IMAGE:7073850), complete cds Length = 507 Score = 52.0 bits (26), Expect = 0.001 Identities = 47/54 (87%) Strand = Plus / Plus Query: 127 gcacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaa 180 ||||||||||||||| ||||| ||| ||||||||| | |||||||||||||| Sbjct: 87 gcacaagaagaagcgtctcgtacagagccccaactcttatttcatggatgtcaa 140
>ref|XM_749849.1| Aspergillus fumigatus Af293 40s ribosomal protein S27 (Afu3g06640) partial mRNA Length = 249 Score = 50.1 bits (25), Expect = 0.005 Identities = 118/149 (79%) Strand = Plus / Plus Query: 164 ttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttcagccactct 223 ||||||||||| |||||||||| |||||||||| ||| || || || ||| ||| | Sbjct: 91 ttcttcatggacgtcaagtgccccggctgcttcaccatcaccaccgtcttctcccatgcc 150 Query: 224 cagaccgtggtggtgtgcccgggctgccagacggtgctctgccaacccaccggcggaaag 283 ||||| || || || ||| | |||||| ||| || || ||||| |||||||| || ||| Sbjct: 151 cagactgtcgtcgtctgcgccggctgctcgaccgtcctttgccagcccaccggtggcaag 210 Query: 284 gcgaggctcaccgagggatgctccttccg 312 || || ||||| ||||| ||||||||||| Sbjct: 211 gccagactcactgagggctgctccttccg 239
>emb|CR937817.1| Single read from an extremity of a cDNA clone made from Aedes aegypti total adult females. 5-prime end of clone KW0AAB1YD24AAM1 from strain Liverpool of Aedes aegypti (yellow fever mosquito) Length = 652 Score = 50.1 bits (25), Expect = 0.005 Identities = 55/65 (84%) Strand = Plus / Plus Query: 155 cccaactcgttcttcatggatgtcaagtgccagggctgcttcaacataacgactgtgttc 214 ||||| |||| ||||||||| |||||||||| || |||| ||| || ||||| |||||| Sbjct: 230 cccaattcgtacttcatggacgtcaagtgccccggatgctacaaaattacgaccgtgttc 289 Query: 215 agcca 219 ||||| Sbjct: 290 agcca 294 Score = 46.1 bits (23), Expect = 0.083 Identities = 44/51 (86%) Strand = Plus / Plus Query: 263 tgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccgc 313 ||||| ||||| || |||||||| ||||||| ||||||||||| |||||| Sbjct: 338 tgccagcccacgggaggaaaggcccggctcacggagggatgctcgttccgc 388
>emb|AJ312340.1|OMY312340 Oncorhynchus mykiss partial mRNA for putative ribosomal protein S27 protein (metallopanstimulin 1) Length = 465 Score = 50.1 bits (25), Expect = 0.005 Identities = 76/93 (81%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 187 |||||||||||||| || || ||| ||| ||||| | |||||||||||| ||||||| Sbjct: 31 cacaagaagaagcgtcttgtccagagcccaaactcctacttcatggatgttaagtgccca 90 Query: 188 ggctgcttcaacataacgactgtgttcagccac 220 || |||| ||| || || || |||||||||||| Sbjct: 91 ggatgctacaagatcacaacggtgttcagccac 123
>gb|AE017347.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7, complete sequence Length = 1347793 Score = 46.1 bits (23), Expect = 0.083 Identities = 29/31 (93%) Strand = Plus / Minus Query: 155 cccaactcgttcttcatggatgtcaagtgcc 185 |||||||| ||||||||||| |||||||||| Sbjct: 764517 cccaactctttcttcatggacgtcaagtgcc 764487
>ref|XM_571937.1| Cryptococcus neoformans var. neoformans JEC21 chromosome 7 Length = 484 Score = 46.1 bits (23), Expect = 0.083 Identities = 29/31 (93%) Strand = Plus / Plus Query: 155 cccaactcgttcttcatggatgtcaagtgcc 185 |||||||| ||||||||||| |||||||||| Sbjct: 185 cccaactctttcttcatggacgtcaagtgcc 215
>ref|XM_524194.1| PREDICTED: Pan troglodytes similar to ribosomal protein S27 (LOC468807), mRNA Length = 381 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 121 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 170
>ref|XM_509802.1| PREDICTED: Pan troglodytes similar to ribosomal protein S27 (LOC452745), mRNA Length = 457 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 169 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 218
>ref|XM_507717.1| PREDICTED: Pan troglodytes similar to chromosome 10 open reading frame 48 (LOC450373), mRNA Length = 961 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 700 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 749
>ref|XM_519204.1| PREDICTED: Pan troglodytes similar to ribosomal protein S27 (LOC463539), mRNA Length = 535 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 250 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 299
>ref|XM_513836.1| PREDICTED: Pan troglodytes LOC457344 (LOC457344), mRNA Length = 498 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 298 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 347
>ref|XM_513325.1| PREDICTED: Pan troglodytes similar to axonemal dynein light chain; inner dynein arm, homolog of clamydomonas (LOC456760), mRNA Length = 1143 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 55 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 104
>gb|BC070219.1| Homo sapiens ribosomal protein S27 (metallopanstimulin 1), mRNA (cDNA clone MGC:88200 IMAGE:6744779), complete cds Length = 481 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 90 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 139
>ref|NG_005350.2| Homo sapiens ribosomal protein S27 pseudogene (LOC392748) on chromosome 7 Length = 448 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 95 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 144
>ref|XM_880953.1| PREDICTED: Bos taurus similar to ribosomal protein S27, transcript variant 3 (LOC615638), mRNA Length = 1048 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||||||||| |||||| |||||| || | ||||||||||| Sbjct: 85 cacaagaagaagcgcctggtgcagagccccaattcctatttcatggatgt 134
>ref|XM_867859.1| PREDICTED: Bos taurus similar to ribosomal protein S27, transcript variant 1 (LOC615638), mRNA Length = 1156 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||||||||| |||||| |||||| || | ||||||||||| Sbjct: 85 cacaagaagaagcgcctggtgcagagccccaattcctatttcatggatgt 134
>ref|XM_880915.1| PREDICTED: Bos taurus similar to ribosomal protein S27, transcript variant 2 (LOC615638), mRNA Length = 644 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||||||||| |||||| |||||| || | ||||||||||| Sbjct: 71 cacaagaagaagcgcctggtgcagagccccaattcctatttcatggatgt 120
>ref|XM_823943.1| Trypanosoma brucei TREU927 40S ribosomal protein S27 (Tb11.01.1475) partial mRNA Length = 261 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 154 ccccaactcgttcttcatggatgtcaagtg 183 |||||| |||| |||||||||||||||||| Sbjct: 84 ccccaattcgtacttcatggatgtcaagtg 113
>gb|AC147024.2| Pan troglodytes BAC clone RP43-89L5 from 7, complete sequence Length = 162174 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 113698 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 113747
>gb|BC053815.1| Xenopus laevis ribosomal protein S27, mRNA (cDNA clone MGC:64500 IMAGE:6875181), complete cds Length = 451 Score = 44.1 bits (22), Expect = 0.33 Identities = 49/58 (84%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgcc 185 ||||||||||||||||| || ||| ||| ||||| | |||||||||||||| |||| Sbjct: 86 cacaagaagaagcgcctggtccagagcccaaactcctatttcatggatgtcaaatgcc 143
>emb|CR687645.2|CNS0FTJD Tetraodon nigroviridis full-length cDNA Length = 1276 Score = 44.1 bits (22), Expect = 0.33 Identities = 79/98 (80%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgccag 187 ||||||||||| ||||| ||||||| || ||||| | |||||||| ||||| |||| Sbjct: 79 cacaagaagaatcgccttgtgcagtgtccaaactcctatttcatggacgtcaaatgccca 138 Query: 188 ggctgcttcaacataacgactgtgttcagccactctca 225 ||||||| ||| || || || |||||||| ||| |||| Sbjct: 139 ggctgctacaagatcaccacagtgttcagtcacgctca 176
>gb|AC002075.2| Homo sapiens BAC clone GS1-274A7 from 7, complete sequence Length = 120030 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Minus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 6321 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 6272
>gb|AC146224.2| Pan troglodytes BAC clone RP43-27B20 from 7, complete sequence Length = 141824 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Minus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 343 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 294
>gb|BC112887.1| Bos taurus similar to ribosomal protein S27, mRNA (cDNA clone MGC:137064 IMAGE:8009582), complete cds Length = 867 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||||||||| |||||| |||||| || | ||||||||||| Sbjct: 86 cacaagaagaagcgcctggtgcagagccccaattcctatttcatggatgt 135
>emb|AL358472.54| Human DNA sequence from clone RP11-422P24 on chromosome 1 Contains the 5' UTR of the gene for transcription repressor p66 beta component of the MeCP1 complex (P66beta), the KIAA0476 gene for a novel protein, the gene for transducer of regulated cAMP response element-binding protein (CREB) 2 (TORC2), the SLC39A1 gene for solute carrier family 39 (zinc transporter), member 1, the CREB3L4 gene for cAMP responsive element binding protein 3-like 4, the JTB gene for jumping translocation breakpoint, the RAB13 gene for RAB13, member RAS oncogene family, the RPS27 gene for ribosomal protein S27 (metallopanstimulin 1), the 3' end of the gene for nuclear pore membrane glycoprotein 210-like (LOC91181), a ribosomal protein S7 (RPS7) pseudogene and a CpG island, complete sequence Length = 175827 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 71789 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 71838
>emb|AL034379.8|HS423B22 Human DNA sequence from clone RP3-423B22 on chromosome 1p33-35.3 Contains the 3' end of the gene for a novel protein (FLJ23231), the gene for a novel protein (FLJ11730), the gene for Smad nuclear interacting protein (SNIP1) (FLJ14716, FLJ12553), a ferritin heavy polypeptide 1 (FTH1) pseudogene, a ribosomal protein S27 (metallopanstimulin 1) (RPS27) pseudogene, the DNALI1 gene for dynein axonemal light intermediate polypeptide 1 and the 3' end of the 3' end of the gene for nucleolar GTPase (HUMAUANTIG), complete sequence Length = 112224 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 79745 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 79794
>emb|AL358732.1|ATT27I15 Arabidopsis thaliana DNA chromosome 3, BAC clone T27I15 Length = 112584 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 ggatgtcaagtgccagggctgcttcaacat 201 |||||| |||||||| |||||||||||||| Sbjct: 110181 ggatgtgaagtgccaaggctgcttcaacat 110210
>emb|AL137898.1|ATT20K12 Arabidopsis thaliana DNA chromosome 3, BAC clone T20K12 Length = 109155 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 ggatgtcaagtgccagggctgcttcaacat 201 |||||| |||||||| |||||||||||||| Sbjct: 520 ggatgtgaagtgccaaggctgcttcaacat 549
>emb|CR858643.1| Pongo pygmaeus mRNA; cDNA DKFZp469N2215 (from clone DKFZp469N2215) Length = 484 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 90 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 139
>gb|AC011493.5| Homo sapiens chromosome 19 clone CTB-28I9, complete sequence Length = 117549 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 105006 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 105055
>gb|AC073544.4| Homo sapiens chromosome 19 clone RP11-359H18, complete sequence Length = 177299 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 17026 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 17075
>gb|AC005912.1| Homo sapiens 12 BAC RPCI11-543P15 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 165516 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 73839 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 73888
>gb|AC099336.2| Homo sapiens chromosome 1 clone RP11-175B9, complete sequence Length = 159838 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Minus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 41649 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 41600
>ref|XM_937128.1| PREDICTED: Homo sapiens similar to ribosomal protein S27 (LOC648077), mRNA Length = 390 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 111 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 160
>ref|XM_926427.1| PREDICTED: Homo sapiens similar to ribosomal protein S27 (LOC643057), mRNA Length = 390 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 111 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 160
>ref|XM_942669.1| PREDICTED: Homo sapiens similar to ribosomal protein S27 (LOC654194), mRNA Length = 360 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 94 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 143
>ref|XM_940998.1| PREDICTED: Homo sapiens similar to ribosomal protein S27 (LOC654205), mRNA Length = 356 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 85 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 134
>ref|XM_930571.1| PREDICTED: Homo sapiens similar to ribosomal protein S27 (LOC653805), mRNA Length = 360 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 94 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 143
>ref|XM_926913.1| PREDICTED: Homo sapiens similar to ribosomal protein S27 (LOC653328), mRNA Length = 356 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 85 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 134
>gb|AC098583.2| Homo sapiens BAC clone RP11-10G12 from 4, complete sequence Length = 127148 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 41191 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 41240
>gb|AC146091.2| Pan troglodytes BAC clone RP43-47P19 from chromosome 7, complete sequence Length = 139240 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 18711 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 18760
>gb|AF324892.1|AF324889S4 Homo sapiens myosin phosphatase target subunit 2 (MYPT2) gene, exons 11 through 24, and complete cds Length = 150000 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Minus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 32183 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 32134
>gb|AC015973.2|AC015973 Homo sapiens BAC clone RP11-366C6 from Y, complete sequence Length = 171834 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Minus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 15166 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 15117
>emb|AJ431616.1|HSA431616 Homo sapiens mRNA adjacent to 3' end of integrated HPV16 (INT467) Length = 296 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 15 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 64
>gb|AY892089.1| Synthetic construct Homo sapiens clone FLH016665.01L ribosomal protein S27 (RPS27) mRNA, partial cds Length = 255 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 55 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 104
>emb|X71350.1|XLS27H X.laevis mRNA homologous to rat ribosomal protein S27 Length = 406 Score = 44.1 bits (22), Expect = 0.33 Identities = 49/58 (84%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgtcaagtgcc 185 ||||||||||||||||| || ||| ||| ||||| | |||||||||||||| |||| Sbjct: 71 cacaagaagaagcgcctggtccagagcccaaactcctatttcatggatgtcaaatgcc 128
>gb|BC002658.2| Homo sapiens ribosomal protein S27 (metallopanstimulin 1), mRNA (cDNA clone MGC:3659 IMAGE:3607957), complete cds Length = 345 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 72 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 121
>gb|AC163767.4| Pan troglodytes BAC clone CH251-162B13 from chromosome unknown, complete sequence Length = 193117 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Minus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 191182 cacaagaagaaacgcctggtgcagagccccaattcctgcttcatggatgt 191133
>gb|AF083337.1|AF083337 Arabidopsis thaliana ribosomal protein S27 (ARS27A) gene, complete cds Length = 5531 Score = 44.1 bits (22), Expect = 0.33 Identities = 28/30 (93%) Strand = Plus / Plus Query: 172 ggatgtcaagtgccagggctgcttcaacat 201 |||||| |||||||| |||||||||||||| Sbjct: 3524 ggatgtgaagtgccaaggctgcttcaacat 3553
>dbj|AP000936.7| Homo sapiens genomic DNA, chromosome 11q, clone:RP11-823O21, complete sequence Length = 219017 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Minus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 115363 cacaagaagaaacgcctggtgcagagccccaattcctgcttcatggatgt 115314
>ref|NG_005391.1| Homo sapiens ribosomal protein S27 pseudogene 3 (RPS27P3) on chromosome 12 Length = 255 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 55 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 104
>gb|AY610246.1| Sus scrofa clone rcad03b_o1.y1.abd, mRNA sequence Length = 342 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||||||||| |||||| |||||| || | ||||||||||| Sbjct: 67 cacaagaagaagcgcctggtgcagagccccaattcctatttcatggatgt 116
>gb|U57847.1|HSU57847 Human ribosomal protein S27 mRNA, complete cds Length = 322 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 68 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 117
>ref|NM_001030.3| Homo sapiens ribosomal protein S27 (metallopanstimulin 1) (RPS27), mRNA Length = 372 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 99 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 148
>gb|L19739.1|HUMMPSI Homo sapiens metallopanstimulin (MPS1) mRNA, complete cds Length = 329 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 75 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 124
>dbj|AB015171.1| Schizosaccharomyces pombe mRNA for ribosomal protein S27 homolog, partial cds Length = 309 Score = 44.1 bits (22), Expect = 0.33 Identities = 31/34 (91%) Strand = Plus / Plus Query: 168 tcatggatgtcaagtgccagggctgcttcaacat 201 |||||||||||||||||| || ||||||||||| Sbjct: 87 tcatggatgtcaagtgccctggatgcttcaacat 120
>dbj|AB061845.1| Homo sapiens RPS27 gene for ribosomal protein S27, complete cds and sequence Length = 2474 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 906 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 955
>dbj|AB007162.1| Homo sapiens gene for ribosomal protein S27, partial cds Length = 550 Score = 44.1 bits (22), Expect = 0.33 Identities = 43/50 (86%) Strand = Plus / Plus Query: 128 cacaagaagaagcgcctcgtgcagtcccccaactcgttcttcatggatgt 177 ||||||||||| ||||| |||||| |||||| || | |||||||||||| Sbjct: 40 cacaagaagaaacgcctggtgcagagccccaattcctacttcatggatgt 89
>ref|XM_481000.1| Oryza sativa (japonica cultivar-group), mRNA Length = 606 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 acgccaagaccgccgccgccgctcg 62 ||||||| ||||||||||||||||| Sbjct: 232 acgccaacaccgccgccgccgctcg 208
>ref|XM_478360.1| Oryza sativa (japonica cultivar-group), mRNA Length = 891 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgccaagaccgccgccgccgc 59 ||||||||||||||||||||| Sbjct: 798 cgccaagaccgccgccgccgc 778
>gb|AY441242.1| Armigeres subalbatus ASAP ID: 39691 cytosolic small ribosomal subunit S27 mRNA sequence Length = 649 Score = 42.1 bits (21), Expect = 1.3 Identities = 39/45 (86%) Strand = Plus / Plus Query: 269 cccaccggcggaaaggcgaggctcaccgagggatgctccttccgc 313 ||||| || |||||||| ||||||| ||||||||||| |||||| Sbjct: 336 cccacggggggaaaggcccggctcacggagggatgctctttccgc 380
>gb|AC098833.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1288_A07, complete sequence Length = 122120 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 agaccgccgccgccgctcgtc 64 ||||||||||||||||||||| Sbjct: 97985 agaccgccgccgccgctcgtc 98005
>gb|AC118285.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OJ1206_C08, complete sequence Length = 115026 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 agaccgccgccgccgctcgtc 64 ||||||||||||||||||||| Sbjct: 54286 agaccgccgccgccgctcgtc 54306
>ref|XM_369161.1| Magnaporthe grisea 70-15 chromosome VI hypothetical protein (MG00083.4) partial mRNA Length = 1143 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 109 ggagctcgagaagctcaagcacaag 133 ||||||||||||||||| ||||||| Sbjct: 855 ggagctcgagaagctcaggcacaag 879
>gb|AY130458.1|AY130456S3 Homo sapiens fibulin 2 (FBLN2) gene, exons 10 through 18 and complete cds Length = 15473 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 10 ccgccaccccgtccctgcatcctct 34 ||||||||||||| ||||||||||| Sbjct: 8754 ccgccaccccgtctctgcatcctct 8778
>gb|AF402837.1| Ictalurus punctatus 40S ribosomal protein S27-2 mRNA, complete cds Length = 477 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 127 gcacaagaagaagcgcctcgtgcag 151 ||||||||||||||| ||||||||| Sbjct: 74 gcacaagaagaagcggctcgtgcag 98
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 acgccaagaccgccgccgccgctcg 62 ||||||| ||||||||||||||||| Sbjct: 9162226 acgccaacaccgccgccgccgctcg 9162202 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 accgccgccgccgctcgtca 65 |||||||||||||||||||| Sbjct: 5692214 accgccgccgccgctcgtca 5692195
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgccaagaccgccgccgccgc 59 ||||||||||||||||||||| Sbjct: 19476690 cgccaagaccgccgccgccgc 19476670
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 agaccgccgccgccgctcgtc 64 ||||||||||||||||||||| Sbjct: 26816046 agaccgccgccgccgctcgtc 26816066 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gaccgccgccgccgctcgtc 64 |||||||||||||||||||| Sbjct: 14488515 gaccgccgccgccgctcgtc 14488496 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gaccgccgccgccgctcgtc 64 |||||||||||||||||||| Sbjct: 12853381 gaccgccgccgccgctcgtc 12853362
>gb|AC090951.1|AC090951 Homo sapiens chromosome 3 clone RP11-488M6 map 3p, complete sequence Length = 181394 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 10 ccgccaccccgtccctgcatcctct 34 ||||||||||||| ||||||||||| Sbjct: 174904 ccgccaccccgtctctgcatcctct 174928
>gb|AC090005.1|AC090005 Homo sapiens chromosome 3 clone RP11-9D10 map 3p, complete sequence Length = 177626 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Plus Query: 10 ccgccaccccgtccctgcatcctct 34 ||||||||||||| ||||||||||| Sbjct: 143480 ccgccaccccgtctctgcatcctct 143504
>gb|AC068319.4|AC068319 Homo sapiens chromosome 3 clone RP11-470I10 map 3p, complete sequence Length = 217456 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 ccgccaccccgtccctgcatcctct 34 ||||||||||||| ||||||||||| Sbjct: 25695 ccgccaccccgtctctgcatcctct 25671
>gb|AF400223.1| Spodoptera frugiperda ribosomal protein S27 mRNA, complete cds Length = 432 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 166 cttcatggatgtcaagtgccagggctgct 194 |||||||||||||||||||| ||||||| Sbjct: 120 cttcatggatgtcaagtgccctggctgct 148
>dbj|AP005185.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0409B11 Length = 168354 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgccaagaccgccgccgccgc 59 ||||||||||||||||||||| Sbjct: 166228 cgccaagaccgccgccgccgc 166208
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 39 cgccaagaccgccgccgccgc 59 ||||||||||||||||||||| Sbjct: 20034 cgccaagaccgccgccgccgc 20014
>dbj|AP005799.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBa0012K14 Length = 155544 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 38 acgccaagaccgccgccgccgctcg 62 ||||||| ||||||||||||||||| Sbjct: 97720 acgccaacaccgccgccgccgctcg 97696
>gb|AF111709.1|AF111709 Oryza sativa subsp. indica Retrosat 1 retrotransposon and Ty3-Gypsy type Retrosat 2 retrotransposon, complete sequences; and unknown genes Length = 52684 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Plus Query: 44 agaccgccgccgccgctcgtc 64 ||||||||||||||||||||| Sbjct: 10872 agaccgccgccgccgctcgtc 10892
>emb|CT573217.3| CH250-279N2, complete sequence Length = 146820 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 346 gggaaaatgaagccccactga 366 ||||||||||||||||||||| Sbjct: 135023 gggaaaatgaagccccactga 135003
>emb|CR936258.1| Natronomonas pharaonis DSM 2160 plasmid PL131 complete genome Length = 130989 Score = 42.1 bits (21), Expect = 1.3 Identities = 27/29 (93%) Strand = Plus / Plus Query: 82 cgacatcgacctcctcaacccgccggcgg 110 |||||||| ||||||||||||| |||||| Sbjct: 13507 cgacatcgccctcctcaacccggcggcgg 13535
>gb|CP000159.1| Salinibacter ruber DSM 13855, complete genome Length = 3551823 Score = 42.1 bits (21), Expect = 1.3 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 tcgacctcctcaacccgccgg 107 ||||||||||||||||||||| Sbjct: 2487936 tcgacctcctcaacccgccgg 2487916
>gb|AC090509.2| Homo sapiens chromosome 3 clone RP11-512I22 map 3p, complete sequence Length = 166000 Score = 42.1 bits (21), Expect = 1.3 Identities = 24/25 (96%) Strand = Plus / Minus Query: 10 ccgccaccccgtccctgcatcctct 34 ||||||||||||| ||||||||||| Sbjct: 25697 ccgccaccccgtctctgcatcctct 25673
>gb|AC124141.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0065C11, complete sequence Length = 141578 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gaccgccgccgccgctcgtc 64 |||||||||||||||||||| Sbjct: 26520 gaccgccgccgccgctcgtc 26501
>gb|AC130726.2| Oryza sativa (japonica cultivar-group) chromosome 5 PAC clone P0508G08, complete sequence Length = 141383 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gaccgccgccgccgctcgtc 64 |||||||||||||||||||| Sbjct: 13927 gaccgccgccgccgctcgtc 13908
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gaccgccgccgccgctcgtc 64 |||||||||||||||||||| Sbjct: 6143225 gaccgccgccgccgctcgtc 6143206
>gb|CP000352.1| Ralstonia metallidurans CH34, complete genome Length = 3928089 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 110 gagctcgagaagctcaagca 129 |||||||||||||||||||| Sbjct: 3511912 gagctcgagaagctcaagca 3511893
>gb|AY358167.1| Homo sapiens clone DNA128322 RFVG5814 (UNQ5814) mRNA, complete cds Length = 894 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctcccccgccgccaccccgtccct 25 |||||| ||||||||||||||||| Sbjct: 288 ctccccagccgccaccccgtccct 265
>emb|AM040009.1| Cicindela littoralis mRNA for ribosomal protein S27e (rpS27e gene) Length = 255 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 166 cttcatggatgtcaagtgcc 185 |||||||||||||||||||| Sbjct: 93 cttcatggatgtcaagtgcc 112
>ref|XM_779479.1| PREDICTED: Strongylocentrotus purpuratus similar to chromodomain helicase DNA binding protein 5 (LOC579359), partial mRNA Length = 6573 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Plus Query: 38 acgccaagaccgccgccgccgctc 61 |||||||| ||||||||||||||| Sbjct: 4918 acgccaaggccgccgccgccgctc 4941
>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome Length = 4352825 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 40 gccaagaccgccgccgccgc 59 |||||||||||||||||||| Sbjct: 1593473 gccaagaccgccgccgccgc 1593492
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gaccgccgccgccgctcgtc 64 |||||||||||||||||||| Sbjct: 6142438 gaccgccgccgccgctcgtc 6142419
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgccaagaccgccgccgccg 58 |||||||||||||||||||| Sbjct: 35193389 cgccaagaccgccgccgccg 35193408
>gb|AC105732.3| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0090D11, complete sequence Length = 174865 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 45 gaccgccgccgccgctcgtc 64 |||||||||||||||||||| Sbjct: 136701 gaccgccgccgccgctcgtc 136682
>dbj|AB199896.1| Crassostrea gigas mRNA for ribosomal protein S27, complete cds Length = 458 Score = 40.1 bits (20), Expect = 5.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 257 gtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccg 312 ||||| ||||| |||||||| || || || || ||||| ||||| ||||||||||| Sbjct: 184 gtgctgtgccagcccaccggggggaaagccagactcacagagggctgctccttccg 239
>gb|AC013270.6| Homo sapiens BAC clone RP11-363D14 from 2, complete sequence Length = 66660 Score = 40.1 bits (20), Expect = 5.1 Identities = 23/24 (95%) Strand = Plus / Minus Query: 2 ctcccccgccgccaccccgtccct 25 |||||| ||||||||||||||||| Sbjct: 35765 ctccccagccgccaccccgtccct 35742
>dbj|AP003230.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0031D02 Length = 183692 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 cgccaagaccgccgccgccg 58 |||||||||||||||||||| Sbjct: 72473 cgccaagaccgccgccgccg 72492
>gb|CP000251.1| Anaeromyxobacter dehalogenans 2CP-C, complete genome Length = 5013479 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 7 ccgccgccaccccgtccctg 26 |||||||||||||||||||| Sbjct: 3896649 ccgccgccaccccgtccctg 3896668
>emb|AJ563471.1|CGI563471 Crassostrea gigas partial mRNA for ribosomal protein S27-1 (rps27-1 gene) Length = 264 Score = 40.1 bits (20), Expect = 5.1 Identities = 47/56 (83%) Strand = Plus / Plus Query: 257 gtgctctgccaacccaccggcggaaaggcgaggctcaccgagggatgctccttccg 312 ||||| ||||| |||||||| || || || || ||||| ||||| ||||||||||| Sbjct: 192 gtgctgtgccagcccaccggggggaaagccagactcacagagggctgctccttccg 247
>dbj|AP005499.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, PAC clone:P0412D08 Length = 150188 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 accgccgccgccgctcgtca 65 |||||||||||||||||||| Sbjct: 147590 accgccgccgccgctcgtca 147571
>dbj|AP005416.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0094P23 Length = 149341 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Minus Query: 46 accgccgccgccgctcgtca 65 |||||||||||||||||||| Sbjct: 46839 accgccgccgccgctcgtca 46820
>dbj|AK108681.1| Oryza sativa (japonica cultivar-group) cDNA clone:002-149-B06, full insert sequence Length = 1465 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 45 gaccgccgccgccgctcgtc 64 |||||||||||||||||||| Sbjct: 291 gaccgccgccgccgctcgtc 310
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 5.1 Identities = 20/20 (100%) Strand = Plus / Plus Query: 48 cgccgccgccgctcgtcaag 67 |||||||||||||||||||| Sbjct: 2059191 cgccgccgccgctcgtcaag 2059210 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,350,759 Number of Sequences: 3902068 Number of extensions: 3350759 Number of successful extensions: 94900 Number of sequences better than 10.0: 195 Number of HSP's better than 10.0 without gapping: 196 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 93139 Number of HSP's gapped (non-prelim): 1756 length of query: 385 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 363 effective length of database: 17,147,199,772 effective search space: 6224433517236 effective search space used: 6224433517236 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
