Clone Information

BLAST Search Result

Clone Name	baal32d11
Clone Library Name	barley_pub

No.	Definition	Score (bits)	E Value
1	RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ...	414	e-116
2	RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ...	385	e-107
3	RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a...	380	e-105
4	RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ...	372	e-103
5	RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a...	370	e-102
6	RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a...	370	e-102
7	RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ...	369	e-102
8	RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a...	369	e-102
9	RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ...	367	e-101
10	RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ...	361	1e-99
11	RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a...	356	3e-98
12	RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a...	355	5e-98
13	RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a...	352	5e-97
14	RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a...	347	2e-95
15	RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a...	326	4e-89
16	RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a...	287	2e-77
17	RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a...	235	7e-62
18	RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a...	230	2e-60
19	RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase a...	47	4e-05
20	MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1)...	31	2.5
21	SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine-...	31	2.5
22	FILA_HUMAN (P20930) Filaggrin	31	3.3
23	EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosin...	31	3.3
24	EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosin...	31	3.3
25	LEPA_HELPY (O25122) GTP-binding protein lepA	30	4.3
26	YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC...	30	4.3
27	EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-...	30	4.3
28	EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosin...	30	4.3
29	GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 pre...	30	5.7
30	PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1...	30	5.7
31	RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)	30	7.4
32	LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 p...	30	7.4
33	PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1...	30	7.4
34	PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1...	30	7.4
35	RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC ...	29	9.7
36	LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA	29	9.7
37	DTD_BURPS (Q63QX1) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	29	9.7
38	DTD_BURMA (Q62HB3) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)	29	9.7
39	PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Proteas...	29	9.7
40	PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Proteas...	29	9.7
41	RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3	29	9.7

>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  414 bits (1065), Expect = e-116
 Identities = 204/205 (99%), Positives = 204/205 (99%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNK ENPRVPIVVTGNDF
Sbjct: 218 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKRENPRVPIVVTGNDF 277

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA
Sbjct: 278 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 337

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV
Sbjct: 338 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 397

Query: 543 KRVQLADTYMSQAALGDANQDAMKT 617
           KRVQLADTYMSQAALGDANQDAMKT
Sbjct: 398 KRVQLADTYMSQAALGDANQDAMKT 422

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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  385 bits (988), Expect = e-107
 Identities = 183/205 (89%), Positives = 197/205 (96%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPI+VTGNDF
Sbjct: 215 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIIVTGNDF 274

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV DE+VV++VDTFPGQSIDFFGA
Sbjct: 275 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPDEAVVRLVDTFPGQSIDFFGA 334

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRKWVG  G+ENI KRLVNSR+GP TF+QPKMT+EKL+EYGHMLVQEQ+NV
Sbjct: 335 LRARVYDDEVRKWVGEIGVENISKRLVNSREGPPTFDQPKMTIEKLMEYGHMLVQEQENV 394

Query: 543 KRVQLADTYMSQAALGDANQDAMKT 617
           KRVQLAD Y+S+AALG AN DAMKT
Sbjct: 395 KRVQLADKYLSEAALGQANDDAMKT 419

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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  380 bits (976), Expect = e-105
 Identities = 180/205 (87%), Positives = 196/205 (95%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDF
Sbjct: 218 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDF 277

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TDNV DE +VKIVD+FPGQSIDFFGA
Sbjct: 278 STLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDNVPDEDIVKIVDSFPGQSIDFFGA 337

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRKWV  TG+ENIGKRLVNSR+GP  FEQPKMT+EKL+EYG+MLV+EQ+NV
Sbjct: 338 LRARVYDDEVRKWVSDTGVENIGKRLVNSREGPPEFEQPKMTIEKLIEYGYMLVKEQENV 397

Query: 543 KRVQLADTYMSQAALGDANQDAMKT 617
           KRVQLA+ Y+S+AALGDAN DAMKT
Sbjct: 398 KRVQLAEQYLSEAALGDANSDAMKT 422

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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  372 bits (954), Expect = e-103
 Identities = 175/204 (85%), Positives = 194/204 (95%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDF
Sbjct: 228 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDF 287

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E +VK+VD FPGQSIDFFGA
Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEDIVKVVDQFPGQSIDFFGA 347

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRKWV   G++ IGK+LVNS++GP TFEQPKMT++KLL+YG+MLV+EQ+NV
Sbjct: 348 LRARVYDDEVRKWVSEVGVDTIGKKLVNSKEGPPTFEQPKMTIDKLLQYGNMLVEEQENV 407

Query: 543 KRVQLADTYMSQAALGDANQDAMK 614
           KRVQLAD YMS+AALGDANQDA+K
Sbjct: 408 KRVQLADKYMSEAALGDANQDAIK 431

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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  370 bits (951), Expect = e-102
 Identities = 174/205 (84%), Positives = 195/205 (95%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+NPRVPI+VTGNDF
Sbjct: 224 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNPRVPIIVTGNDF 283

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V +E VV++VDTFPGQSIDFFGA
Sbjct: 284 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVDEEHVVQLVDTFPGQSIDFFGA 343

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVR+WV  TG+ENI ++LVNS++GP TFEQPK+T+EKLLEYGHMLV EQ+NV
Sbjct: 344 LRARVYDDEVRRWVSETGVENIARKLVNSKEGPPTFEQPKITIEKLLEYGHMLVAEQENV 403

Query: 543 KRVQLADTYMSQAALGDANQDAMKT 617
           KRVQLAD Y+++AALG+AN+DAMKT
Sbjct: 404 KRVQLADKYLNEAALGEANEDAMKT 428

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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  370 bits (950), Expect = e-102
 Identities = 178/205 (86%), Positives = 195/205 (95%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDF
Sbjct: 227 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDF 286

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+VVKIVD+FPGQSIDFFGA
Sbjct: 287 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVVKIVDSFPGQSIDFFGA 346

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRKWV  TGIE IG++L+NSRDGP TFEQPKMT+EKLLEYG+MLVQEQ+NV
Sbjct: 347 LRARVYDDEVRKWVSGTGIELIGEKLLNSRDGPPTFEQPKMTLEKLLEYGNMLVQEQENV 406

Query: 543 KRVQLADTYMSQAALGDANQDAMKT 617
           KRVQLA+TY+ +AALGDAN DA+ T
Sbjct: 407 KRVQLAETYLKEAALGDANADAINT 431

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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  369 bits (947), Expect = e-102
 Identities = 178/205 (86%), Positives = 193/205 (94%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDF
Sbjct: 232 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDF 291

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV +E+V+KIVDTFPGQSIDFFGA
Sbjct: 292 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVPEEAVIKIVDTFPGQSIDFFGA 351

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMTVEKLLEYG+MLVQEQ+NV
Sbjct: 352 LRARVYDDEVRKWVSGTGIEAIGDKLLNSFDGPPTFEQPKMTVEKLLEYGNMLVQEQENV 411

Query: 543 KRVQLADTYMSQAALGDANQDAMKT 617
           KRVQLA+TY+ +AALGDAN DA+ T
Sbjct: 412 KRVQLAETYLKEAALGDANADAINT 436

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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  369 bits (946), Expect = e-102
 Identities = 174/205 (84%), Positives = 194/205 (94%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDF
Sbjct: 228 NDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDF 287

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF++DNV+ E +VK+VDTFPGQSIDFFGA
Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCIGIFRSDNVAKEDIVKLVDTFPGQSIDFFGA 347

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRKW+   G+++IGK+LVNS++GP TFEQPKMT+EKLLEYG+MLVQEQ+NV
Sbjct: 348 LRARVYDDEVRKWITGVGVDSIGKKLVNSKEGPPTFEQPKMTIEKLLEYGNMLVQEQENV 407

Query: 543 KRVQLADTYMSQAALGDANQDAMKT 617
           KRVQLAD Y+S+AALGDAN DAM T
Sbjct: 408 KRVQLADKYLSEAALGDANSDAMNT 432

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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  367 bits (942), Expect = e-101
 Identities = 174/204 (85%), Positives = 192/204 (94%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDF
Sbjct: 228 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDF 287

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TDNV+D+ +VK+VDTFPGQSIDFFGA
Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDNVADDDIVKLVDTFPGQSIDFFGA 347

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVY DEVRKWV   G++ IGK+LVNS++GP +FEQPKMT++KLL YG MLVQEQ+NV
Sbjct: 348 LRARVYHDEVRKWVSEVGVDTIGKKLVNSKEGPPSFEQPKMTIDKLLGYGGMLVQEQENV 407

Query: 543 KRVQLADTYMSQAALGDANQDAMK 614
           KRVQLAD YMS+AALGDAN DA+K
Sbjct: 408 KRVQLADKYMSEAALGDANNDAIK 431

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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  361 bits (926), Expect = 1e-99
 Identities = 175/203 (86%), Positives = 187/203 (92%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK+EN RVPI+VTGNDF
Sbjct: 232 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQENARVPIIVTGNDF 291

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TDNV  E VVKIVD FPGQSIDFFGA
Sbjct: 292 STLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFRTDNVPAEDVVKIVDNFPGQSIDFFGA 351

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRKWV  TGIE IG +L+NS DGP TFEQPKMT+EKLLEYG+MLVQEQ+NV
Sbjct: 352 LRARVYDDEVRKWVSGTGIEKIGDKLLNSFDGPPTFEQPKMTIEKLLEYGNMLVQEQENV 411

Query: 543 KRVQLADTYMSQAALGDANQDAM 611
           KRVQLAD Y+ +AALGDAN DA+
Sbjct: 412 KRVQLADKYLKEAALGDANADAI 434

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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  356 bits (914), Expect = 3e-98
 Identities = 165/205 (80%), Positives = 192/205 (93%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+VTGNDF
Sbjct: 230 NDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIIVTGNDF 289

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTRDDR+GVCKGIF+TD V +E + K+VDTFPGQSIDFFGA
Sbjct: 290 STLYAPLIRDGRMEKFYWAPTRDDRVGVCKGIFRTDGVPEEDITKLVDTFPGQSIDFFGA 349

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRKW+   G++  GK+LVNS++GP TF+QPKM+++KLL+YG+MLVQEQ+NV
Sbjct: 350 LRARVYDDEVRKWISGVGVDATGKKLVNSKEGPPTFDQPKMSLDKLLQYGNMLVQEQENV 409

Query: 543 KRVQLADTYMSQAALGDANQDAMKT 617
           KRVQLAD Y+++AALG+AN+DA+K+
Sbjct: 410 KRVQLADKYLNEAALGNANEDAIKS 434

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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  355 bits (912), Expect = 5e-98
 Identities = 171/203 (84%), Positives = 187/203 (92%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEEN RVPI+ TGNDF
Sbjct: 228 NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENARVPIICTGNDF 287

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD + DE +V +VD FPGQSIDFFGA
Sbjct: 288 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDKIKDEDIVTLVDQFPGQSIDFFGA 347

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRK+V S G+E IGKRLVNSR+GP  FEQP+MT EKL+EYG+MLV EQ+NV
Sbjct: 348 LRARVYDDEVRKFVESLGVEKIGKRLVNSREGPPVFEQPEMTYEKLMEYGNMLVMEQENV 407

Query: 543 KRVQLADTYMSQAALGDANQDAM 611
           KRVQLA+TY+SQAALGDAN DA+
Sbjct: 408 KRVQLAETYLSQAALGDANADAI 430

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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  352 bits (903), Expect = 5e-97
 Identities = 167/203 (82%), Positives = 187/203 (92%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDL+ GAGRMGGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNK++N RVPI+VTGNDF
Sbjct: 226 NDLEPGAGRMGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKQDNARVPIIVTGNDF 285

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTR+DRIGVC GIF+TD V  E VVK+VD FPGQSIDFFGA
Sbjct: 286 STLYAPLIRDGRMEKFYWAPTREDRIGVCTGIFKTDKVPAEHVVKLVDAFPGQSIDFFGA 345

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVY DEVRKWV S G++N+GK+LVNS+DGP  FEQP+MT++KL+EYG+MLVQEQ+NV
Sbjct: 346 LRARVYHDEVRKWVNSVGVDNVGKKLVNSKDGPPVFEQPEMTLQKLMEYGNMLVQEQENV 405

Query: 543 KRVQLADTYMSQAALGDANQDAM 611
           KRVQLAD YMS AALGDAN+DA+
Sbjct: 406 KRVQLADQYMSSAALGDANKDAI 428

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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  347 bits (889), Expect = 2e-95
 Identities = 161/205 (78%), Positives = 190/205 (92%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKE+N RVPI+VTGNDF
Sbjct: 232 NDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEDNARVPIIVTGNDF 291

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYWAPTR+DRIGVCKGIF+TD V ++ +V++VD  PGQSIDFFGA
Sbjct: 292 STLYAPLIRDGRMEKFYWAPTREDRIGVCKGIFRTDGVPEKDIVELVDKHPGQSIDFFGA 351

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRKW+   G++++GK+LVNS++GP TF+QPKMT++KLL Y  MLVQEQ+NV
Sbjct: 352 LRARVYDDEVRKWISGVGVDSVGKKLVNSKEGPPTFDQPKMTLDKLLLYASMLVQEQENV 411

Query: 543 KRVQLADTYMSQAALGDANQDAMKT 617
           KRVQLAD Y+++AALG+AN+DA+K+
Sbjct: 412 KRVQLADQYLNEAALGNANEDAIKS 436

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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  326 bits (835), Expect = 4e-89
 Identities = 153/185 (82%), Positives = 170/185 (91%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGR+GGTTQYTVNNQMVNATLMNIAD PTNVQLPGMYNKEENPRVPI+VTGNDF
Sbjct: 225 NDLDAGAGRLGGTTQYTVNNQMVNATLMNIADNPTNVQLPGMYNKEENPRVPIIVTGNDF 284

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRM+KFYWAPTR+DRIG+C GIF+TD V  E +VK+VDTFPGQSIDFFGA
Sbjct: 285 STLYAPLIRDGRMDKFYWAPTREDRIGICTGIFRTDGVPFEDIVKLVDTFPGQSIDFFGA 344

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDDEVRKW    G+E IG+ LVNS++ P TF+QPKMT+EKLLEYG+MLV EQ+NV
Sbjct: 345 LRARVYDDEVRKWAVGVGVERIGRNLVNSKESPPTFDQPKMTIEKLLEYGNMLVMEQENV 404

Query: 543 KRVQL 557
           KRV+L
Sbjct: 405 KRVKL 409

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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  287 bits (734), Expect = 2e-77
 Identities = 142/195 (72%), Positives = 159/195 (81%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGRMG TTQYTVNNQMVNATLMNIAD PTNVQLPG+Y  EE PRVPIV TGNDF
Sbjct: 201 NDLDAGAGRMGDTTQYTVNNQMVNATLMNIADNPTNVQLPGVYKNEEIPRVPIVCTGNDF 260

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEK+YW PTR+DRIGVC GIFQ DNV    V  +VDTFPGQSIDFFGA
Sbjct: 261 STLYAPLIRDGRMEKYYWNPTREDRIGVCMGIFQEDNVQRREVENLVDTFPGQSIDFFGA 320

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LRARVYDD VR+W+  TG++ IG++LVN+R   V   +  M +  L++YG  LV EQ+NV
Sbjct: 321 LRARVYDDMVRQWITDTGVDKIGQQLVNARQ-KVAMPKVSMDLNVLIKYGKSLVDEQENV 379

Query: 543 KRVQLADTYMSQAAL 587
           KRVQLAD Y+S A L
Sbjct: 380 KRVQLADAYLSGAEL 394

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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  235 bits (600), Expect = 7e-62
 Identities = 111/189 (58%), Positives = 140/189 (74%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGR    TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RVPI+VTGNDF
Sbjct: 101 NDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSTPLRRVPIIVTGNDF 160

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYW P RD+++G+  GIF  D +S   V K+VD+FP QSIDFF A
Sbjct: 161 STLYAPLIRDGRMEKFYWEPHRDEKVGIVGGIFAEDGLSQRDVEKLVDSFPNQSIDFFSA 220

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LR+R+YD+++R ++   G EN+  R+VNS +GP  F++P  T+  L+E  + +V EQ  +
Sbjct: 221 LRSRIYDEQIRDFIHQVGYENVSLRVVNSLEGPPAFKKPDFTLSHLIESANFMVAEQKRI 280

Query: 543 KRVQLADTY 569
           +  QL D Y
Sbjct: 281 ETSQLVDEY 289

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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  230 bits (587), Expect = 2e-60
 Identities = 110/189 (58%), Positives = 138/189 (73%)
 Frame = +3

Query: 3   NDLDAGAGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDF 182
           NDLDAGAGR    TQYTVN Q+VNATLMNIAD PT+VQLPG Y+     RVPI+VTGNDF
Sbjct: 101 NDLDAGAGRFDEGTQYTVNTQLVNATLMNIADNPTDVQLPGSYDSNPIRRVPIIVTGNDF 160

Query: 183 STLYAPLIRDGRMEKFYWAPTRDDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSIDFFGA 362
           STLYAPLIRDGRMEKFYW P RDD++G+  GIF  D +S   + ++VDTFP QSIDFF A
Sbjct: 161 STLYAPLIRDGRMEKFYWEPNRDDKVGIVGGIFAEDGLSQREIEQLVDTFPKQSIDFFSA 220

Query: 363 LRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEKLLEYGHMLVQEQDNV 542
           LR+R+YD ++R ++   G E I  R+VNS + P  F++P  ++  L+E G++++ EQ  V
Sbjct: 221 LRSRIYDIQIRDFIHKVGFERISLRVVNSLEAPPEFKKPDFSLAHLIESGNLVLGEQQRV 280

Query: 543 KRVQLADTY 569
              QL D Y
Sbjct: 281 DNSQLVDEY 289

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>RCA_POPEU (P84562) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast (RuBisCO activase) (RA) (Fragments)
          Length = 32

 Score = 47.0 bits (110), Expect = 4e-05
 Identities = 27/60 (45%), Positives = 30/60 (50%)
 Frame = +3

Query: 318 IVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVEK 497
           +VDTFPGQSIDFFGAL                            R+GP TFEQP MT+EK
Sbjct: 1   LVDTFPGQSIDFFGAL----------------------------REGPPTFEQPAMTIEK 32

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>MAGL2_HUMAN (Q9UJ55) MAGE-like protein 2 (Necdin-like protein 1) (Protein nM15)|
          Length = 529

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 21/81 (25%), Positives = 30/81 (37%), Gaps = 2/81 (2%)
 Frame = -3

Query: 264 HRYGRHGWEPSRTSPYDHHGSEEXXXXXXXXXXXRWAHGGSPPCCTCQGAARWWGHR--R 91
           H    H W+  R  P+++    +            W H  +P     +G + W G    R
Sbjct: 181 HTLAFHDWQGPR--PWENLNLSDWEVQSPIQVSGDWEHPNTP-----RGLSGWEGPSTSR 233

Query: 90  CSSGWRSPSGC*RCTAWFRPS 28
             SGW  PS     +AW  PS
Sbjct: 234 ILSGWEGPSASWALSAWEGPS 254

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>SYL_PSESM (Q87VX3) Leucyl-tRNA synthetase (EC 6.1.1.4) (Leucine--tRNA ligase)|
            (LeuRS)
          Length = 868

 Score = 31.2 bits (69), Expect = 2.5
 Identities = 33/140 (23%), Positives = 54/140 (38%), Gaps = 4/140 (2%)
 Frame = -1

Query: 611  HRILVSITQSCLAHVGVSKLHTLDIVLLLDEHVPVXXXXXXXXXXXLEGHGPVPRVHQPL 432
            HR L  + +   AHVG     +LDI  L DE   V            +  G   + +  +
Sbjct: 675  HRFLRRVWRLAQAHVGQGASGSLDIAALTDEQKAVRRSIHQAIKQASQDIGQNQKFNTAV 734

Query: 431  ANVLDSGRADPLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRL--VTDIVGLE--DTLAD 264
            A V        +  + V+  + Q+T +   L  EG++ +   L  +T  +  E    L  
Sbjct: 735  AQV--------MTLMNVLEKAPQATPQDRALLQEGLETVTLLLAPITPHISHELWTQLGH 786

Query: 263  TDTVVTGGSPVELLHTTITD 204
             + V+  G PV   H  + D
Sbjct: 787  NEPVIDAGWPVFDAHALVQD 806

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>FILA_HUMAN (P20930) Filaggrin|
          Length = 4061

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = +2

Query: 14   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 139
            RW G   RNH  +   Q  DG RHP  H   R  H  +A    Q G
Sbjct: 3554 RWSGSASRNHRGSAQEQSRDGSRHPTSHHEDRAGHGHSAESSRQSG 3599



 Score = 30.0 bits (66), Expect = 5.7
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +2

Query: 14   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 139
            RW G   RNH  +   Q  DG RHP  H+  R  H  +A    Q G
Sbjct: 2906 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2951



 Score = 30.0 bits (66), Expect = 5.7
 Identities = 18/46 (39%), Positives = 21/46 (45%), Gaps = 4/46 (8%)
 Frame = +2

Query: 14   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 139
            RW G   RNH  +   Q  DG RHP  H+  R  H  +A    Q G
Sbjct: 2582 RWSGSASRNHHGSAQEQLRDGSRHPRSHQEDRAGHGHSADSSRQSG 2627



 Score = 30.0 bits (66), Expect = 5.7
 Identities = 18/46 (39%), Positives = 20/46 (43%), Gaps = 4/46 (8%)
 Frame = +2

Query: 14   RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAAPWHVQQG 139
            RW G   RNH  +   Q  DG RHP  H   R  H  +A    Q G
Sbjct: 1933 RWSGSASRNHLGSAWEQSRDGSRHPGSHHEDRAGHGHSADSSRQSG 1978



 Score = 29.3 bits (64), Expect = 9.7
 Identities = 16/39 (41%), Positives = 18/39 (46%), Gaps = 4/39 (10%)
 Frame = +2

Query: 14  RWCG*DGRNH--AVHRQQPDGERHPDEHR--RCPHQRAA 118
           RW G   RNH  +   Q  DG RHP  H   R  H  +A
Sbjct: 636 RWSGSASRNHHGSAQEQSRDGSRHPRSHHEDRAGHGHSA 674

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>EPHB6_PANTR (P0C0K6) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1005

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -3

Query: 150 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 25
           GGSPP   C G  +W    G  RC  G++   G   C A  R  Y
Sbjct: 262 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 306

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>EPHB6_HUMAN (O15197) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6) (HEP)
          Length = 1006

 Score = 30.8 bits (68), Expect = 3.3
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 3/45 (6%)
 Frame = -3

Query: 150 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 25
           GGSPP   C G  +W    G  RC  G++   G   C A  R  Y
Sbjct: 263 GGSPPRLHCNGEGKWMVAVGGCRCQPGYQPARGDKACQACPRGLY 307

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>LEPA_HELPY (O25122) GTP-binding protein lepA|
          Length = 602

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 20/79 (25%), Positives = 37/79 (46%)
 Frame = +3

Query: 315 KIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFEQPKMTVE 494
           KI+ T P  S DF   L+A +YD     ++G+         LV   DG +  EQ  + + 
Sbjct: 180 KIITTIPAPSGDFNAPLKALIYDSWFDNYLGALA-------LVRIMDGSINTEQEILVMG 232

Query: 495 KLLEYGHMLVQEQDNVKRV 551
              ++G + +   + +K++
Sbjct: 233 TGKKHGVLGLYYPNPLKKI 251

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>YNEI_ECOLI (P76149) Aldehyde dehydrogenase-like protein yneI (EC 1.2.1.-)|
          Length = 462

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 14/42 (33%), Positives = 23/42 (54%)
 Frame = -1

Query: 401 PLAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDIVGLED 276
           P  H I ++P+T   E+++ L W G DD+++ L     G  D
Sbjct: 5   PATHAISINPATG--EQLSVLPWAGADDIENALQLAAAGFRD 44

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>EPHB6_RAT (P0C0K7) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6)
          Length = 1013

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = -3

Query: 150 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 25
           GGSPP   C G  RW    G  RC  G +   G   C A    SY
Sbjct: 272 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSY 316

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>EPHB6_MOUSE (O08644) Ephrin type-B receptor 6 precursor (Tyrosine-protein|
           kinase-defective receptor EPH-6) (MEP)
          Length = 1014

 Score = 30.4 bits (67), Expect = 4.3
 Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 3/45 (6%)
 Frame = -3

Query: 150 GGSPPCCTCQGAARWW---GHRRCSSGWRSPSGC*RCTAWFRPSY 25
           GGSPP   C G  RW    G  RC  G +   G   C A    SY
Sbjct: 273 GGSPPRLHCNGEGRWMVAVGGCRCQPGHQPARGDKLCQACPEGSY 317

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>GP116_HUMAN (Q8IZF2) Probable G-protein coupled receptor 116 precursor|
          Length = 1346

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 14/35 (40%), Positives = 21/35 (60%)
 Frame = -2

Query: 565 VSASCTRLTLSCSWTSMCPYSSSFSTVIFGCSKVT 461
           + +SC+R TL    T  CP  SS +TVI+ C  ++
Sbjct: 420 IDSSCSRYTLKADGTQ-CPSGSSGTTVIYTCEFIS 453

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>PNPT1_MOUSE (Q8K1R3) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 30.0 bits (66), Expect = 5.7
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 314 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 180
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGVPIKIIMEAI-QQASVAKKE 584

Query: 179 IV 174
           I+
Sbjct: 585 IL 586

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>RL3_RHOPA (P60456) 50S ribosomal protein L3 (RRP-L3)|
          Length = 241

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 37/159 (23%), Positives = 60/159 (37%), Gaps = 15/159 (9%)
 Frame = +3

Query: 21  AGRMGGTTQYTVNNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGNDFSTLYAP 200
           A ++G T  +T   + +  T++ +     N Q+ G   KE+N  V + V      T+Y P
Sbjct: 7   AQKVGMTRVFTEAGEHIPVTVLKLG----NCQVLGHRTKEKNGYVALQVGSGSRKTVYMP 62

Query: 201 LIRDGRMEKFYWAPTR--------DDRIGVCKGIFQTDNVSDESVVKIVDTFPGQSID-- 350
               G+       P R        +D +       Q D+      V +  T  G+     
Sbjct: 63  KAERGQFAAAKVEPKRKVEEFRVSEDALLPVGAEIQADHFVVGQFVDVTGTSTGKGFAGG 122

Query: 351 ----FFGALRARVYDDEVRKWVGST-GIENIGKRLVNSR 452
                FG LRA        + +GST G ++ GK   N +
Sbjct: 123 MKRWNFGGLRATHGVSVSHRSIGSTGGRQDPGKTFKNKK 161

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>LRC24_MOUSE (Q8BHA1) Leucine-rich repeat-containing protein 24 precursor|
          Length = 521

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 16/37 (43%), Positives = 26/37 (70%), Gaps = 1/37 (2%)
 Frame = +3

Query: 399 WVGSTGIENIGKRLVNSRDGPVT-FEQPKMTVEKLLE 506
           W+GS  I+  G+RL++SRD  +T  E P++ ++ LLE
Sbjct: 222 WLGSW-IKEGGRRLLSSRDKKITCAEPPRLALQSLLE 257

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>PNPT1_PONPY (Q5RCW2) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1)
          Length = 783

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 314 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 180
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 179 IV 174
           I+
Sbjct: 585 IL 586

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>PNPT1_HUMAN (Q8TCS8) Polyribonucleotide nucleotidyltransferase 1, mitochondrial|
           precursor (EC 2.7.7.8) (PNPase 1) (Polynucleotide
           phosphorylase-like protein) (PNPase old-35) (3'-5' RNA
           exonuclease OLD35)
          Length = 783

 Score = 29.6 bits (65), Expect = 7.4
 Identities = 20/62 (32%), Positives = 31/62 (50%), Gaps = 15/62 (24%)
 Frame = -1

Query: 314 DDRLVTDIVGLEDTLADTDTVVTG---------------GSPVELLHTTITDQRSVERRE 180
           D RL+TDI+G+ED   D D  + G               G P++++   I  Q SV ++E
Sbjct: 526 DYRLLTDILGIEDYNGDMDFKIAGTNKGITALQADIKLPGIPIKIVMEAI-QQASVAKKE 584

Query: 179 IV 174
           I+
Sbjct: 585 IL 586

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>RPOA_ANAMM (Q5PA81) DNA-directed RNA polymerase alpha chain (EC 2.7.7.6) (RNAP|
           alpha subunit) (Transcriptase alpha chain) (RNA
           polymerase alpha subunit)
          Length = 366

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 15/57 (26%), Positives = 32/57 (56%)
 Frame = +3

Query: 303 ESVVKIVDTFPGQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVTFE 473
           + +V  V+T    S D   A+ ARV  D+++ ++GS  +E   ++ V+  +G + ++
Sbjct: 224 DRLVISVETDGSISPDEAVAVSARVLQDQLQSFIGSEEVEGESRKKVDKEEGALPYD 280

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>LEPA_LEIXX (Q6AEB5) GTP-binding protein lepA|
          Length = 616

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 26/66 (39%), Positives = 33/66 (50%), Gaps = 9/66 (13%)
 Frame = -1

Query: 437 PLANVLDSGRADP------LAHLIVVHPSTQSTEKVNGLSWEGVDDLDDRLVTDI---VG 285
           P+ N +D   ADP      LA LI   P      +V+G +  GVDDL DR+V +I   VG
Sbjct: 142 PVLNKIDLPAADPDKYAAELAGLIGGKPG--DVLRVSGKTGVGVDDLLDRVVQEIPAPVG 199

Query: 284 LEDTLA 267
             D  A
Sbjct: 200 AADAPA 205

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>DTD_BURPS (Q63QX1) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 152

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
 Frame = +3

Query: 18  GAGRMGG---TTQYTV---NNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 179
           GAGR GG    +Q+T+    N  +  +    A      +L   + +    R PIV TG  
Sbjct: 71  GAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRRARERHPIVATGEF 130

Query: 180 FSTLYAPLIRDGRMEKFYWAPTR 248
            + +   L+ DG +   +W  TR
Sbjct: 131 GADMQVSLVNDGPVT--FWLQTR 151

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>DTD_BURMA (Q62HB3) D-tyrosyl-tRNA(Tyr) deacylase (EC 3.1.-.-)|
          Length = 152

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 23/83 (27%), Positives = 36/83 (43%), Gaps = 6/83 (7%)
 Frame = +3

Query: 18  GAGRMGG---TTQYTV---NNQMVNATLMNIADAPTNVQLPGMYNKEENPRVPIVVTGND 179
           GAGR GG    +Q+T+    N  +  +    A      +L   + +    R PIV TG  
Sbjct: 71  GAGRAGGLLLVSQFTLAADTNSGLRPSFTPAAPPDEGERLFDYFVRRARERHPIVATGEF 130

Query: 180 FSTLYAPLIRDGRMEKFYWAPTR 248
            + +   L+ DG +   +W  TR
Sbjct: 131 GADMQVSLVNDGPVT--FWLQTR 151

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>PTRA_SALTY (Q8ZMB5) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 284 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 174
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369

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>PTRA_SALTI (Q8Z418) Protease 3 precursor (EC 3.4.24.55) (Protease III)|
           (Pitrilysin) (Protease pi)
          Length = 962

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = -1

Query: 284 LEDTLADTDTVVTGGSPVELLHTTITDQRSVERREIV 174
           +E   AD+D +V G S V  +  T+TD+    R E+V
Sbjct: 333 VEGISADSDPIVNGNSGVFAISATLTDKGLANRDEVV 369

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>RL3_CLOPE (Q8XHS3) 50S ribosomal protein L3|
          Length = 209

 Score = 29.3 bits (64), Expect = 9.7
 Identities = 21/77 (27%), Positives = 33/77 (42%), Gaps = 1/77 (1%)
 Frame = +3

Query: 291 NVSDESVVKIVDTFP-GQSIDFFGALRARVYDDEVRKWVGSTGIENIGKRLVNSRDGPVT 467
           NV DE  +K VDTF  G  +D  G  + + +   +++W  S G  + G +   +      
Sbjct: 92  NVGDE--IK-VDTFEIGDKVDVSGVSKGKGFQGTIKRWNASRGPMSHGSKFHRAPGSMGA 148

Query: 468 FEQPKMTVEKLLEYGHM 518
              P  T +     GHM
Sbjct: 149 ASDPSRTFKNKRMPGHM 165


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 86,740,719
Number of Sequences: 219361
Number of extensions: 1820276
Number of successful extensions: 6281
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 6002
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6274
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5596027262
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)

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full-length cDNA and EST

Clone Information

BLAST Search Result