Clone Name	baal32d11
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	1189	0.0
2	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	1189	0.0
3	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	1023	0.0
4	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	803	0.0
5	gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carbo...	795	0.0
6	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	755	0.0
7	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	672	0.0
8	emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putat...	456	e-125
9	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	392	e-106
10	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	385	e-103
11	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	385	e-103
12	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	385	e-103
13	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	385	e-103
14	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	385	e-103
15	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	385	e-103
16	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	385	e-103
17	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	385	e-103
18	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	371	2e-99
19	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	369	7e-99
20	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	343	4e-91
21	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	343	4e-91
22	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	343	4e-91
23	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	343	4e-91
24	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	333	4e-88
25	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	333	4e-88
26	gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate ca...	331	2e-87
27	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	325	1e-85
28	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	325	1e-85
29	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	293	3e-76
30	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	285	8e-74
31	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	270	5e-69
32	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	270	5e-69
33	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	270	5e-69
34	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	270	5e-69
35	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	270	5e-69
36	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	270	5e-69
37	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	270	5e-69
38	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	270	5e-69
39	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	270	5e-69
40	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	270	5e-69
41	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	264	3e-67
42	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	262	1e-66
43	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	262	1e-66
44	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	262	1e-66
45	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	262	1e-66
46	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	256	8e-65
47	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	256	8e-65
48	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	256	8e-65
49	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	256	8e-65
50	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	256	8e-65
51	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	256	8e-65
52	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	256	8e-65
53	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	256	8e-65
54	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	248	2e-62
55	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	248	2e-62
56	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	248	2e-62
57	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	248	2e-62
58	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	248	2e-62
59	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	248	2e-62
60	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	246	7e-62
61	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	246	7e-62
62	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	246	7e-62
63	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	234	3e-58
64	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	226	7e-56
65	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	224	3e-55
66	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	202	1e-48
67	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	196	6e-47
68	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	192	9e-46
69	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	190	4e-45
70	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	188	1e-44
71	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	188	1e-44
72	gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bi...	182	9e-43
73	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	180	4e-42
74	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	172	9e-40
75	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	165	2e-37
76	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	163	8e-37
77	emb|Y10657.1|CLRCAGENE C.littorale rca gene	159	1e-35
78	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	157	5e-35
79	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	153	8e-34
80	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	151	3e-33
81	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	151	3e-33
82	gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence	133	8e-28
83	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	121	3e-24
84	emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosph...	117	4e-23
85	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	111	3e-21
86	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	105	2e-19
87	gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome	92	3e-15
88	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	92	3e-15
89	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	88	4e-14
90	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	80	1e-11
91	emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase	80	1e-11
92	ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G7...	56	1e-04
93	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	56	1e-04
94	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	56	1e-04
95	gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	1e-04
96	gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, com...	56	1e-04
97	emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Co...	56	1e-04
98	gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic s...	56	1e-04
99	dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown ...	56	1e-04
100	gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N...	56	1e-04
101	emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Co...	54	6e-04
102	gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, compl...	44	0.54
103	emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom...	42	2.1
104	emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Co...	42	2.1
105	gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complet...	40	8.4
106	gb|U60105.1| Bos taurus large conductance calcium-activated pota...	40	8.4
107	ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM001...	40	8.4
108	emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding prot...	40	8.4
109	gb|AF026000.2| Sus scrofa calcium-activated potassium channel al...	40	8.4
110	gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, co...	40	8.4
111	ref|NM_174680.2| Bos taurus potassium large conductance calcium-...	40	8.4
112	gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRN...	40	8.4
113	gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRN...	40	8.4
114	gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRN...	40	8.4
115	gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome	40	8.4
116	ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like f...	40	8.4
117	ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like f...	40	8.4
118	gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, com...	40	8.4
119	gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence	40	8.4
120	ref|NM_214219.1| Sus scrofa calcium-activated potassium channel ...	40	8.4
121	gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein p...	40	8.4

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 1189 bits (600), Expect = 0.0
 Identities = 612/616 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 792  caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 851

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 852  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 911

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 912  tggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 971

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 972  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 1031

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1032 cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtctgtga 1091

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1092 cgagtctgtcgtaaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 1151

                                                                        
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcga 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1152 tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcga 1211

                                                                        
Query: 422  gaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaa 481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1212 gaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaa 1271

                                                                        
Query: 482  gatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgt 541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1272 gatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgt 1331

                                                                        
Query: 542  caagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaacca 601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1332 caagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaacca 1391

                            
Query: 602  ggatgcgatgaagact 617
            ||||||||||||||||
Sbjct: 1392 ggatgcgatgaagact 1407

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 1189 bits (600), Expect = 0.0
 Identities = 612/616 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 537  caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 596

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 597  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 656

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 657  tggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 716

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 717  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 776

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 777  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtctgtga 836

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 837  cgagtctgtcgtaaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 896

                                                                        
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcga 421
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 897  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcga 956

                                                                        
Query: 422  gaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaa 481
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 957  gaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaa 1016

                                                                        
Query: 482  gatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgt 541
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1017 gatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgt 1076

                                                                        
Query: 542  caagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaacca 601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1077 caagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaacca 1136

                            
Query: 602  ggatgcgatgaagact 617
            ||||||||||||||||
Sbjct: 1137 ggatgcgatgaagact 1152

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score = 1023 bits (516), Expect = 0.0
 Identities = 591/616 (95%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||| |||||||||||||||||||| ||||| |||||||||||||||||
Sbjct: 712  caacgatcttgacgccggtgcgggtaggatgggcgggaccacacagtacaccgtcaacaa 771

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||
Sbjct: 772  ccagatggtgaacgccaccctcatgaacatcgccgatgcccccaccaatgtgcagctccc 831

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             |||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||
Sbjct: 832  aggcatgtacaacaaggaggagaacccacgtgtgcccatcgtcgtcactggtaacgattt 891

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||||||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 892  ctcgacgttgtacgcccctctgatccgtgatggtcgtatggagaagttctactgggctcc 951

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 952  cacccgcgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagcga 1011

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            |||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 1012 cgagtccgtcgtcaagatcgtcgacaccttcccaggacaatccatcgactttttcggtgc 1071

                                                                        
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcga 421
            |||||||||||||||||||||||| |||||||||||||||||   ||||||||| |||||
Sbjct: 1072 tctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacctctaccggtatcga 1131

                                                                        
Query: 422  gaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaa 481
            |||||||||||||| ||||||||||||||||||||| || |||||||| |||||||||||
Sbjct: 1132 gaacattggcaagaagctggtgaactcgcgggacggaccagtgacctttgagcagccaaa 1191

                                                                        
Query: 482  gatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgt 541
            ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1192 gatgacagtggagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgt 1251

                                                                        
Query: 542  caagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaacca 601
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1252 caagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaacca 1311

                            
Query: 602  ggatgcgatgaagact 617
            ||||||||||||||||
Sbjct: 1312 ggatgcgatgaagact 1327

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  803 bits (405), Expect = 0.0
 Identities = 563/616 (91%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            |||||| || ||||| || |||||| |||||||||| ||||| ||||||||||| |||||
Sbjct: 723  caacgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaacaa 782

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            |||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||
Sbjct: 783  ccagatggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgcagctccc 842

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || ||||||||||||||||||||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 843  ggggatgtacaacaaggaggagaacccccgtgtccccatcatcgtcaccggcaacgactt 902

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||||||||| ||||| || || |||||||| |||||||||||||||||||||||||| ||
Sbjct: 903  ctcgacgctgtacgcgcccctcatccgtgacggtcgtatggagaagttctactgggcgcc 962

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 963  cacccgcgaggaccgtatcggcgtctgcaagggtatcttccagaccgacaacgtcagcga 1022

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            ||||||||||||||||||||||||||| ||||||||||| ||||| ||||| ||||||||
Sbjct: 1023 cgagtctgtcgtcaagatcgtcgacacnttcccaggacagtccatcgacttcttcggtgc 1082

                                                                        
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcga 421
            ||||||||||||||||||||||| ||||||||||||||||||    || |||||||| ||
Sbjct: 1083 tctgcgtgctcgggtgtacgacgttgaggtgcgcaagtgggtgtcgtccaccggaattga 1142

                                                                        
Query: 422  gaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaa 481
            |||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct: 1143 gaacatcggcaagaggctggtgaactcgcgggacggacccgtcaccttcgagcagcccaa 1202

                                                                        
Query: 482  gatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgt 541
            |||||| || |||||| |||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 1203 gatgacggtggagaagttgctggagtacggccacatgcttgtccaggagcaggacaatgt 1262

                                                                        
Query: 542  caagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaacca 601
            |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 1263 caagcgtgtgcagcttgcggacacttacatgagccaggcagctctgggtgatgcgaacaa 1322

                            
Query: 602  ggatgcgatgaagact 617
            |||||| |||||||||
Sbjct: 1323 ggatgccatgaagact 1338

---

>gb|AY206372.1| Triticum aestivum ribulose-1,5-bisphosphate carboxylase activase
           precursor RNA, partial cds; nuclear gene for chloroplast
           product
          Length = 850

 Score =  795 bits (401), Expect = 0.0
 Identities = 458/477 (96%)
 Strand = Plus / Plus

                                                                       
Query: 141 gagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcct 200
           |||||||| |||||||||||||||||||| |||||||||||||||||| | ||||| |||
Sbjct: 1   gagaacccacgtgtgcccatcgtcgtcactggtaacgatttctcgacgttgtacgcccct 60

                                                                       
Query: 201 ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatc 260
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 61  ctgatccgtgatggtcgtatggagaagttctactgggctcccacccgcgacgaccgtatc 120

                                                                       
Query: 261 ggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatc 320
           |||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||
Sbjct: 121 ggtgtctgcaagggtatcttccagaccgacaatgtcagcgacgagtccgtcgtcaagatc 180

                                                                       
Query: 321 gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 380
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 181 gtcgacaccttcccaggacaatccatcgactttttcggtgctctgcgtgctcgggtgtac 240

                                                                       
Query: 381 gacgatgaggtgcgcaagtgggtcggctctaccggaatcgagaacattggcaagaggctg 440
           ||||| |||||||||||||||||   ||||||||| ||||||||||||||||||| ||||
Sbjct: 241 gacgacgaggtgcgcaagtgggtgacctctaccggtatcgagaacattggcaagaagctg 300

                                                                       
Query: 441 gtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtcgagaagctg 500
           ||||||||||||||||| || |||||||| |||||||||||||||||||| |||||||||
Sbjct: 301 gtgaactcgcgggacggaccagtgacctttgagcagccaaagatgacagtggagaagctg 360

                                                                       
Query: 501 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 560
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 361 ctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgct 420

                                                                    
Query: 561 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagact 617
           |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 421 gacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatgaagact 477

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  755 bits (381), Expect = 0.0
 Identities = 557/616 (90%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            |||||| || ||||| || |||||| |||||||||| ||||| ||||||||||| |||||
Sbjct: 733  caacgacctcgacgccggcgcgggtcggatgggcgggaccacccagtacaccgtgaacaa 792

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            |||||||||||||||||||||||||||||||||||| || ||||||||||||||||| ||
Sbjct: 793  ccagatggtgaacgccaccctgatgaacatcgccgacgcgcccaccaacgtgcagcttcc 852

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || ||||||||||||||||||||||||||||| |||||  | |||||||| ||||| ||
Sbjct: 853  ggggatgtacaacaaggaggagaacccccgtgttcccattatngtcaccggcaacgactt 912

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
             |||||||| ||||| || || || | ||| ||||||||||||||||| |||||||| ||
Sbjct: 913  ttcgacgctgtacgccccccttattcctgacggtcgtatggagaagttttactgggcgcc 972

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| || ||||||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 973  cacccgcgaggaccgtatcggcgtctgcaagggtatcttccagaccgacaacgtcagcga 1032

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            ||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||
Sbjct: 1033 cgagtctgtcgtcaagatcgtcgacaccttcccaggacagtccatcgacttcttcggtgc 1092

                                                                        
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcga 421
            |||||||||||||||||||||||| |||||||||||||||||    || |||||||| ||
Sbjct: 1093 tctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgtcgtccaccggaattga 1152

                                                                        
Query: 422  gaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaa 481
            |||||| ||||||||||||||||||||||||||||| ||||| |||||||||||||| ||
Sbjct: 1153 gaacatcggcaagaggctggtgaactcgcgggacggacccgtcaccttcgagcagcccaa 1212

                                                                        
Query: 482  gatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgt 541
            |||||| || |||||| |||| |||||||| |||||||| ||||||||||||||||||||
Sbjct: 1213 gatgacggtggagaagttgctggagtacggccacatgcttgtccaggagcaggacaatgt 1272

                                                                        
Query: 542  caagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaacca 601
            |||||||||||||||||| ||||| ||||||||||||||||||||||||||||| ||| |
Sbjct: 1273 caagcgtgtgcagcttgcggacacttacatgagccaggcagctctgggtgatgcgaacaa 1332

                            
Query: 602  ggatgcgatgaagact 617
            |||||| |||||||||
Sbjct: 1333 ggatgccatgaagact 1348

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  672 bits (339), Expect = 0.0
 Identities = 345/347 (99%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6534 caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 6593

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6594 ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 6653

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            ||||||||||||||||  ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6654 tggcatgtacaacaagagggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 6713

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6714 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 6773

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6774 cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 6833

                                                           
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattg 348
            |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6834 cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattg 6880



 Score =  535 bits (270), Expect = e-149
 Identities = 270/270 (100%)
 Strand = Plus / Plus

                                                                        
Query: 348  gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 407
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7021 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 7080

                                                                        
Query: 408  tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 467
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7081 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 7140

                                                                        
Query: 468  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 527
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7141 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 7200

                                                                        
Query: 528  gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 587
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7201 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 7260

                                          
Query: 588  ggtgatgctaaccaggatgcgatgaagact 617
            ||||||||||||||||||||||||||||||
Sbjct: 7261 ggtgatgctaaccaggatgcgatgaagact 7290



 Score =  369 bits (186), Expect = 7e-99
 Identities = 351/406 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            |||||| || ||||| || |||||  |||||||||| || ||||||||||| || |||||
Sbjct: 3407 caacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtgaacaa 3466

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 3467 ccagatggtgaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagctccc 3526

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||
Sbjct: 3527 ggggatgtacaacaaggaggagaacccccgcgtgcccatcatcgtcaccggcaacgactt 3586

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||||||||| |||||||| ||||||||||| || || |||||||||||||||||||| ||
Sbjct: 3587 ctcgacgctgtacgctcccctgatccgtgacgggcgcatggagaagttctactgggcgcc 3646

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| || ||||| ||||| || |||||||| |||||||  |||||||| |||   ||
Sbjct: 3647 cacccgcgaggaccgcatcggcgtgtgcaagggcatcttccgcaccgacaacgtcccgga 3706

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            |||| | || || | | | || ||||||||||| || || ||||| ||||| ||||| ||
Sbjct: 3707 cgaggccgtggtgaggctggtggacaccttcccggggcagtccatcgacttcttcggcgc 3766

                                                          
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 407
             ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 3767 gctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 3812



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                        
Query: 468  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 527
            ||||| ||||| ||||||||  | ||||||||  | |||||||| |||||||| ||||||
Sbjct: 3873 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 3932

                                         
Query: 528  gagcaggacaatgtcaagcgtgtgcagct 556
            |||||||| || |||||||||||||||||
Sbjct: 3933 gagcaggagaacgtcaagcgtgtgcagct 3961

---

>emb|AJ635203.1| Triticum durum ssp. durum partial mRNA for putative rubisco
           activase (rba1 gene)
          Length = 321

 Score =  456 bits (230), Expect = e-125
 Identities = 260/270 (96%)
 Strand = Plus / Plus

                                                                       
Query: 348 gactttttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 407
           |||||||||||||||||||||||||||||||||||||| |||||||||||||||||   |
Sbjct: 2   gactttttcggtgctctgcgtgctcgggtgtacgacgacgaggtgcgcaagtgggtgacc 61

                                                                       
Query: 408 tctaccggaatcgagaacattggcaagaggctggtgaactcgcgggacgggcccgtgacc 467
           |||||||| ||||||||||||||||||| ||| ||||||||||||||||| || ||||||
Sbjct: 62  tctaccggtatcgagaacattggcaagaagcttgtgaactcgcgggacggaccagtgacc 121

                                                                       
Query: 468 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 527
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 122 tttgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 181

                                                                       
Query: 528 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 587
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 182 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 241

                                         
Query: 588 ggtgatgctaaccaggatgcgatgaagact 617
           ||||||||||||||||||||||||||||||
Sbjct: 242 ggtgatgctaaccaggatgcgatgaagact 271

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
            insert sequence
          Length = 1691

 Score =  392 bits (198), Expect = e-106
 Identities = 351/402 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 716  caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 775

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 776  ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 835

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            ||| ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 836  tgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 895

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 896  ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 955

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 956  cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 1015

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            ||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| ||
Sbjct: 1016 cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgc 1075

                                                      
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
            ||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1076 tcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1117



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 420  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1134 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1193

                                                                        
Query: 480  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1194 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1253

                                                                        
Query: 540  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1254 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1313

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            (rca) mRNA, complete cds
          Length = 1675

 Score =  385 bits (194), Expect = e-103
 Identities = 350/402 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 685  caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 744

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 745  ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 804

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 805  cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 864

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 865  ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 924

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 925  cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 984

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            ||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| ||
Sbjct: 985  cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgc 1044

                                                      
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
            ||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1045 tcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1086



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 420  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1103 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1162

                                                                        
Query: 480  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1163 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 1222

                                                                        
Query: 540  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1223 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1282

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ribulose-bisphosphate
            carboxylase activase large isoform precursor protein,
            complete cds, clone: 13YPR038
          Length = 1558

 Score =  385 bits (194), Expect = e-103
 Identities = 350/402 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 680  caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 739

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 740  ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 799

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 800  cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 859

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 860  ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 919

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 920  cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 979

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            ||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| ||
Sbjct: 980  cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgc 1039

                                                      
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
            ||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1040 tcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1081



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 420  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1098 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1157

                                                                        
Query: 480  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1158 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1217

                                                                        
Query: 540  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1218 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1277

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
            insert sequence
          Length = 1721

 Score =  385 bits (194), Expect = e-103
 Identities = 350/402 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 728  caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 787

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 788  ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 847

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 848  cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 907

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 908  ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 967

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 968  cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 1027

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            ||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| ||
Sbjct: 1028 cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgc 1087

                                                      
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
            ||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1088 tcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1129



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 420  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1146 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1205

                                                                        
Query: 480  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1206 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1265

                                                                        
Query: 540  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1266 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1325

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
            insert sequence
          Length = 1682

 Score =  385 bits (194), Expect = e-103
 Identities = 350/402 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 679  caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 738

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 739  ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 798

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 799  cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 858

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 859  ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 918

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 919  cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 978

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            ||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| ||
Sbjct: 979  cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgc 1038

                                                      
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
            ||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1039 tcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1080



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 420  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1097 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1156

                                                                        
Query: 480  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1157 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1216

                                                                        
Query: 540  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1217 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1276

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
            insert sequence
          Length = 1680

 Score =  385 bits (194), Expect = e-103
 Identities = 350/402 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 717  caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 776

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 777  ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 836

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 837  cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 896

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 897  ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 956

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 957  cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 1016

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            ||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| ||
Sbjct: 1017 cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgc 1076

                                                      
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
            ||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1077 tcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1118



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 420  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1135 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1194

                                                                        
Query: 480  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1195 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1254

                                                                        
Query: 540  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1255 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1314

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  385 bits (194), Expect = e-103
 Identities = 350/402 (87%)
 Strand = Plus / Plus

                                                                       
Query: 2   caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
           ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 500 caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 559

                                                                       
Query: 62  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
           ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 560 ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 619

                                                                       
Query: 122 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 620 cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 679

                                                                       
Query: 182 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
           ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 680 ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 739

                                                                       
Query: 242 cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
           |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 740 cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 799

                                                                       
Query: 302 cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
           ||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| ||
Sbjct: 800 cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgc 859

                                                     
Query: 362 tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
           ||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 860 tcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 901



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 420  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 918  gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 977

                                                                        
Query: 480  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 978  aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1037

                                                                        
Query: 540  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1038 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1097

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
            precursor, complete cds
          Length = 1706

 Score =  385 bits (194), Expect = e-103
 Identities = 350/402 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 721  caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 780

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 781  ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 840

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 841  cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 900

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 901  ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 960

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 961  cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 1020

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            ||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| ||
Sbjct: 1021 cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgc 1080

                                                      
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
            ||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1081 tcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1122



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 420  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1139 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1198

                                                                        
Query: 480  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1199 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1258

                                                                        
Query: 540  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1259 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1318

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
            precursor, complete cds
          Length = 1623

 Score =  385 bits (194), Expect = e-103
 Identities = 350/402 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 715  caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 774

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 775  ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 834

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 835  cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 894

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 895  ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 954

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 955  cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 1014

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            ||||    |||||||||||||||||| ||||||||| |||||||| || || ||||| ||
Sbjct: 1015 cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgc 1074

                                                      
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
            ||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 1075 tcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 1116



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                        
Query: 420  gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
            |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 1133 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 1192

                                                                        
Query: 480  aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
            ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 1193 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 1252

                                                                        
Query: 540  gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
            ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 1253 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 1312

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B (RcaB)
            mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1525

 Score =  371 bits (187), Expect = 2e-99
 Identities = 463/555 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            |||||| || ||||| || |||||  |||||||||| || ||||||||||| || |||||
Sbjct: 688  caacgacctggacgccggcgcggggcggatgggcgggacgacgcagtacacggtgaacaa 747

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||| || || ||||||||||||||| ||||
Sbjct: 748  ccagatggtgaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagttccc 807

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || ||||||||||||||||||||||| || ||||||||| |||||||||| ||||| ||
Sbjct: 808  ggggatgtacaacaaggaggagaacccacgcgtgcccatcatcgtcaccggcaacgactt 867

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||||||||| ||||| || || ||||| || || || |||||||||||||||||||| ||
Sbjct: 868  ctcgacgctgtacgcgcccctcatccgggacggccgcatggagaagttctactgggcgcc 927

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| || ||||| ||||| || |||||||| |||||||  |||||||| |||   ||
Sbjct: 928  cacccgggaggaccgcatcggcgtgtgcaagggcatcttccgcaccgacaacgtccccga 987

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            |||| | || || | | | || ||||||||||| || || ||||| ||||| ||||| ||
Sbjct: 988  cgaggccgtggtgaggctggtggacaccttcccggggcagtccatcgacttcttcggcgc 1047

                                                                        
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggctctaccggaatcga 421
             ||||| || |||||||||||||| |||||||||||||||||||||   | |||  ||||
Sbjct: 1048 gctgcgggcgcgggtgtacgacgacgaggtgcgcaagtgggtcggcgagatcggcgtcga 1107

                                                                        
Query: 422  gaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaa 481
            ||||||   |||| |||| || |||||  |||| |||||   ||| ||||| ||||| ||
Sbjct: 1108 gaacatctccaagcggctcgtcaactccagggaggggccgccgacgttcgaccagcccaa 1167

                                                                        
Query: 482  gatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgt 541
            ||||||  ||||||||||  | |||||||| |||||||| |||||||||||||| || ||
Sbjct: 1168 gatgaccatcgagaagctcatggagtacggccacatgctggtccaggagcaggagaacgt 1227

                           
Query: 542  caagcgtgtgcagct 556
             ||||| ||||||||
Sbjct: 1228 gaagcgcgtgcagct 1242

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  369 bits (186), Expect = 7e-99
 Identities = 351/406 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            |||||| || ||||| || |||||  |||||||||| || ||||||||||| || |||||
Sbjct: 838  caacgacctggacgccggcgcgggccggatgggcgggacgacgcagtacacggtgaacaa 897

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||||||||||||||| || || ||||||||||||||||||||
Sbjct: 898  ccagatggtgaacgccaccctgatgaacatcgcggacgcgcccaccaacgtgcagctccc 957

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||
Sbjct: 958  ggggatgtacaacaaggaggagaacccccgcgtgcccatcatcgtcaccggcaacgactt 1017

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||||||||| |||||||| ||||||||||| || || |||||||||||||||||||| ||
Sbjct: 1018 ctcgacgctgtacgctcccctgatccgtgacgggcgcatggagaagttctactgggcgcc 1077

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||||| || ||||| ||||| || |||||||| |||||||  |||||||| |||   ||
Sbjct: 1078 cacccgcgaggaccgcatcggcgtgtgcaagggcatcttccgcaccgacaacgtcccgga 1137

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            |||| | || || | | | || ||||||||||| || || ||||| ||||| ||||| ||
Sbjct: 1138 cgaggccgtggtgaggctggtggacaccttcccggggcagtccatcgacttcttcggcgc 1197

                                                          
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggtcggc 407
             ||||| || |||||||||||||| |||||||||||||||||||||
Sbjct: 1198 gctgcgggcacgggtgtacgacgacgaggtgcgcaagtgggtcggc 1243



 Score = 81.8 bits (41), Expect = 2e-12
 Identities = 77/89 (86%)
 Strand = Plus / Plus

                                                                        
Query: 468  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 527
            ||||| ||||| ||||||||  | ||||||||  | |||||||| |||||||| ||||||
Sbjct: 1304 ttcgaccagcccaagatgaccatagagaagctcatggagtacggccacatgctggtccag 1363

                                         
Query: 528  gagcaggacaatgtcaagcgtgtgcagct 556
            |||||||| || |||||||||||||||||
Sbjct: 1364 gagcaggagaacgtcaagcgtgtgcagct 1392

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  343 bits (173), Expect = 4e-91
 Identities = 302/345 (87%)
 Strand = Plus / Minus

                                                                          
Query: 2      caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
              ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 109032 caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 108973

                                                                          
Query: 62     ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
              ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 108972 ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 108913

                                                                          
Query: 122    tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
               || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 108912 cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 108853

                                                                          
Query: 182    ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
              ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 108852 ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 108793

                                                                          
Query: 242    cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
              |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 108792 cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 108733

                                                           
Query: 302    cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 346
              ||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 108732 cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 108688



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                          
Query: 32     gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 91
              |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 112679 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 112620

                                                         
Query: 92     cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 134
              ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 112619 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 112577



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Minus

                                                                          
Query: 420    gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
              |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 108522 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 108463

                                                                          
Query: 480    aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
              ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 108462 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 108403

                                                                          
Query: 540    gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
              ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 108402 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 108343



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                          
Query: 219    atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 278
              ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 112519 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 112460

                  
Query: 279    ttcc 282
              ||||
Sbjct: 112459 ttcc 112456



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                
Query: 354    ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
              ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 108588 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 108539



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                           
Query: 420    gagaacattggcaagaggctggtgaactc 448
              |||||||| |||| |||||||||||||||
Sbjct: 112352 gagaacatcggcaggaggctggtgaactc 112324

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  343 bits (173), Expect = 4e-91
 Identities = 302/345 (87%)
 Strand = Plus / Minus

                                                                         
Query: 2     caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
             ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 30909 caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 30850

                                                                         
Query: 62    ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
             ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 30849 ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 30790

                                                                         
Query: 122   tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
              || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 30789 cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 30730

                                                                         
Query: 182   ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
             ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 30729 ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 30670

                                                                         
Query: 242   cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
             |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 30669 cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 30610

                                                          
Query: 302   cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 346
             ||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 30609 cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 30565



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                         
Query: 32    gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 91
             |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 34556 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 34497

                                                        
Query: 92    cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 134
             ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 34496 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 34454



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Minus

                                                                         
Query: 420   gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
             |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 30399 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 30340

                                                                         
Query: 480   aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
             ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 30339 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 30280

                                                                         
Query: 540   gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
             ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 30279 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 30220



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                         
Query: 219   atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 278
             ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 34396 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 34337

                 
Query: 279   ttcc 282
             ||||
Sbjct: 34336 ttcc 34333



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                               
Query: 354   ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
             ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 30465 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 30416



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                          
Query: 420   gagaacattggcaagaggctggtgaactc 448
             |||||||| |||| |||||||||||||||
Sbjct: 34229 gagaacatcggcaggaggctggtgaactc 34201

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  343 bits (173), Expect = 4e-91
 Identities = 302/345 (87%)
 Strand = Plus / Minus

                                                                            
Query: 2        caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
                ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 28304171 caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 28304112

                                                                            
Query: 62       ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
                ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 28304111 ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 28304052

                                                                            
Query: 122      tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
                 || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 28304051 cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 28303992

                                                                            
Query: 182      ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
                ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 28303991 ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 28303932

                                                                            
Query: 242      cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
                |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 28303931 cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 28303872

                                                             
Query: 302      cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 346
                ||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 28303871 cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 28303827



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 32       gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 91
                |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 28307818 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28307759

                                                           
Query: 92       cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 134
                ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28307758 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28307716



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Minus

                                                                            
Query: 420      gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
                |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 28303661 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28303602

                                                                            
Query: 480      aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
                ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 28303601 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28303542

                                                                            
Query: 540      gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
                ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 28303541 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28303482



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 219      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 278
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28307658 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28307599

                    
Query: 279      ttcc 282
                ||||
Sbjct: 28307598 ttcc 28307595



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 354      ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
                ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 28303727 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28303678



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 420      gagaacattggcaagaggctggtgaactc 448
                |||||||| |||| |||||||||||||||
Sbjct: 28307491 gagaacatcggcaggaggctggtgaactc 28307463

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  343 bits (173), Expect = 4e-91
 Identities = 302/345 (87%)
 Strand = Plus / Minus

                                                                            
Query: 2        caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
                ||||||||| ||||| ||||| ||| | ||||| || ||||| |||||||| || |||||
Sbjct: 28286620 caacgatctggacgcgggtgcaggtcgcatgggaggcaccacccagtacacggtgaacaa 28286561

                                                                            
Query: 62       ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
                ||||||||||||||||||||||||||||||||||||   ||| |||||||||||||||||
Sbjct: 28286560 ccagatggtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccc 28286501

                                                                            
Query: 122      tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
                 || ||||||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||
Sbjct: 28286500 cgggatgtacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgactt 28286441

                                                                            
Query: 182      ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
                ||| ||||| ||||| || || |||||||| || ||||||||||||||||||||||||||
Sbjct: 28286440 ctccacgctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcc 28286381

                                                                            
Query: 242      cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
                |||||| ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||
Sbjct: 28286380 cacccgcgacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccga 28286321

                                                             
Query: 302      cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccat 346
                ||||    |||||||||||||||||| ||||||||| ||||||||
Sbjct: 28286320 cgaggacatcgtcaagatcgtcgacagcttcccaggccaatccat 28286276



 Score =  109 bits (55), Expect = 1e-20
 Identities = 91/103 (88%)
 Strand = Plus / Minus

                                                                            
Query: 32       gggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacat 91
                |||||| || ||||||||||| || |||||||||||||||||||| || |||||||||||
Sbjct: 28290267 gggcggcacgacgcagtacacggtgaacaaccagatggtgaacgcgacgctgatgaacat 28290208

                                                           
Query: 92       cgccgatgcccccaccaacgtgcagctccctggcatgtacaac 134
                ||| ||   ||||||||||||||||||||| || |||||||||
Sbjct: 28290207 cgcggacaaccccaccaacgtgcagctcccagggatgtacaac 28290165



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Minus

                                                                            
Query: 420      gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
                |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 28286110 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 28286051

                                                                            
Query: 480      aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
                ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 28286050 aagatgacgatcgaaaagctcatggagtacggatacatgcttgtgaaggagcaggagaac 28285991

                                                                            
Query: 540      gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
                ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 28285990 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 28285931



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 55/64 (85%)
 Strand = Plus / Minus

                                                                            
Query: 219      atggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatc 278
                ||||| ||||||||||||||||||||||| || ||||| || || || |||| ||| |||
Sbjct: 28290107 atggacaagttctactgggctcccacccgcgaggaccgcattggcgtgtgcaggggcatc 28290048

                    
Query: 279      ttcc 282
                ||||
Sbjct: 28290047 ttcc 28290044



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 44/50 (88%)
 Strand = Plus / Minus

                                                                  
Query: 354      ttcggtgctctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgggt 403
                ||||| ||||| ||||| || || |||||||| |||||||||||||||||
Sbjct: 28286176 ttcggcgctcttcgtgcccgtgtttacgacgacgaggtgcgcaagtgggt 28286127



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Minus

                                             
Query: 420      gagaacattggcaagaggctggtgaactc 448
                |||||||| |||| |||||||||||||||
Sbjct: 28289940 gagaacatcggcaggaggctggtgaactc 28289912

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  333 bits (168), Expect = 4e-88
 Identities = 342/400 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
           ||||||||| || || ||||| ||  |||||||||| ||||| |||||||||||||||||
Sbjct: 374 caacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaacaa 433

                                                                       
Query: 62  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
           ||||||||||||||||||||| ||||||||||||||   |||||||||||| ||||||||
Sbjct: 434 ccagatggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctccc 493

                                                                       
Query: 122 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            ||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||| ||
Sbjct: 494 cggcatgtacaacaagcaggagaacccccgcgtgcccatcatcgtcaccggcaacgactt 553

                                                                       
Query: 182 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
           ||| || |||||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 554 ctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggctcc 613

                                                                       
Query: 242 cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
           |||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||    |
Sbjct: 614 caccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtccccaa 673

                                                                       
Query: 302 cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            |||  |||| ||||| |||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 674 ggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggtgc 733

                                                   
Query: 362 tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 401
            ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 734 actgagggcgagggtctacgacgacgaggtgaggaagtgg 773



 Score =  105 bits (53), Expect = 2e-19
 Identities = 155/189 (82%)
 Strand = Plus / Plus

                                                                       
Query: 429 ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 488
           |||||||||||||||||||||| ||| |||||   ||| |||| |||||| |||||||| 
Sbjct: 801 ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 860

                                                                       
Query: 489 gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 548
            | || |||||||| ||||||||  ||||||| || ||||||||||| || || ||| | 
Sbjct: 861 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 920

                                                                       
Query: 549 gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 608
           |||||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| |||
Sbjct: 921 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 980

                    
Query: 609 atgaagact 617
           || ||||||
Sbjct: 981 atcaagact 989

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  333 bits (168), Expect = 4e-88
 Identities = 342/400 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
           ||||||||| || || ||||| ||  |||||||||| ||||| |||||||||||||||||
Sbjct: 568 caacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaacaa 627

                                                                       
Query: 62  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
           ||||||||||||||||||||| ||||||||||||||   |||||||||||| ||||||||
Sbjct: 628 ccagatggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctccc 687

                                                                       
Query: 122 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            ||||||||||||||| ||||||||||||| ||||||||| |||||||||| ||||| ||
Sbjct: 688 cggcatgtacaacaagcaggagaacccccgcgtgcccatcatcgtcaccggcaacgactt 747

                                                                       
Query: 182 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
           ||| || |||||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 748 ctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggctcc 807

                                                                       
Query: 242 cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
           |||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||    |
Sbjct: 808 caccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtccccaa 867

                                                                       
Query: 302 cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            |||  |||| ||||| |||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 868 ggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggtgc 927

                                                   
Query: 362 tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 401
            ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 928 actgagggcgagggtctacgacgacgaggtgaggaagtgg 967



 Score =  105 bits (53), Expect = 2e-19
 Identities = 155/189 (82%)
 Strand = Plus / Plus

                                                                        
Query: 429  ggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgaca 488
            |||||||||||||||||||||| ||| |||||   ||| |||| |||||| |||||||| 
Sbjct: 995  ggcaagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgacc 1054

                                                                        
Query: 489  gtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgt 548
             | || |||||||| ||||||||  ||||||| || ||||||||||| || || ||| | 
Sbjct: 1055 ctggacaagctgctggagtacggcaacatgctggtgcaggagcaggagaacgtgaagagg 1114

                                                                        
Query: 549  gtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcg 608
            |||||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| |||
Sbjct: 1115 gtgcagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcg 1174

                     
Query: 609  atgaagact 617
            || ||||||
Sbjct: 1175 atcaagact 1183

---

>gb|AF349638.1|AF349638 Oryza sativa ribulose-1,5-bisphosphate carboxylase activase mRNA,
           partial cds; nuclear gene for chloroplast product
          Length = 651

 Score =  331 bits (167), Expect = 2e-87
 Identities = 293/335 (87%)
 Strand = Plus / Plus

                                                                       
Query: 69  gtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatg 128
           |||||||||||||||||||||||||||||   ||| ||||||||||||||||| || |||
Sbjct: 1   gtgaacgccaccctgatgaacatcgccgacaacccaaccaacgtgcagctccccgggatg 60

                                                                       
Query: 129 tacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacg 188
           |||||||||||||| ||||||||||| |||||| |||||||||| ||||| ||||| |||
Sbjct: 61  tacaacaaggaggacaacccccgtgtccccatcatcgtcaccggcaacgacttctccacg 120

                                                                       
Query: 189 ctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgt 248
           || ||||| || || |||||||| || |||||||||||||||||||||||||||||||| 
Sbjct: 121 ctgtacgcgccgctcatccgtgacgggcgtatggagaagttctactgggctcccacccgc 180

                                                                       
Query: 249 gacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtct 308
           ||||||||| |||| |||||||||||||||||||  |||||||| |||   ||||||   
Sbjct: 181 gacgaccgtgtcggcgtctgcaagggtatcttccgcaccgacaacgtccccgacgaggac 240

                                                                       
Query: 309 gtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgt 368
            |||||||||||||||||| ||||||||| |||||||| || || ||||| ||||| |||
Sbjct: 241 atcgtcaagatcgtcgacagcttcccaggccaatccatcgatttcttcggcgctcttcgt 300

                                              
Query: 369 gctcgggtgtacgacgatgaggtgcgcaagtgggt 403
           || || || |||||||| |||||||||||||||||
Sbjct: 301 gcccgtgtttacgacgacgaggtgcgcaagtgggt 335



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 147/180 (81%)
 Strand = Plus / Plus

                                                                       
Query: 420 gagaacattggcaagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagcca 479
           |||||||||||||||||||||||||||||| |||| || ||   |   ||||||||||| 
Sbjct: 352 gagaacattggcaagaggctggtgaactcgagggagggcccaccggagttcgagcagccc 411

                                                                       
Query: 480 aagatgacagtcgagaagctgctagagtacgggcacatgctcgtccaggagcaggacaat 539
           ||||||||  |||| |||||  | ||||||||  ||||||| ||  |||||||||| || 
Sbjct: 412 aagatgacgatcgaaaagctcatcgagtacggatacatgcttgtgaaggagcaggagaac 471

                                                                       
Query: 540 gtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctgggtgatgctaac 599
           ||||||||||||||||| |||||    ||| ||||| |||| ||||| ||||| ||||||
Sbjct: 472 gtcaagcgtgtgcagctggctgagcagtacttgagcgaggctgctcttggtgacgctaac 531

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  325 bits (164), Expect = 1e-85
 Identities = 341/400 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| || || ||||| ||  |||||||||| ||||| |||||||||||||||||
Sbjct: 675  caacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaacaa 734

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||||||||||||||| ||||||||||||||   |||||||||||| ||||||||
Sbjct: 735  ccagatggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctccc 794

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             ||||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||| ||
Sbjct: 795  cggcatgtacaacaagcaagagaacccccgcgtgcccatcatcgtcaccggcaacgactt 854

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| || |||||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 855  ctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggctcc 914

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            |||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||    |
Sbjct: 915  caccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtccccaa 974

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
             |||  |||| ||||| |||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 975  ggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggtgc 1034

                                                    
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 401
             ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 1035 actgagggcgagggtctacgacgacgaggtgaggaagtgg 1074



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 150/186 (80%)
 Strand = Plus / Plus

                                                                        
Query: 432  aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 491
            ||||||||||||||||||| ||| |||||   ||| |||| |||||| ||||||||  | 
Sbjct: 1105 aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1164

                                                                        
Query: 492  gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 551
            || |||||||| ||||||||  | ||||| || ||||| ||||| || || ||| | |||
Sbjct: 1165 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1224

                                                                        
Query: 552  cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 611
            ||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| ||||| 
Sbjct: 1225 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1284

                  
Query: 612  aagact 617
            ||||||
Sbjct: 1285 aagact 1290

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  325 bits (164), Expect = 1e-85
 Identities = 341/400 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
           ||||||||| || || ||||| ||  |||||||||| ||||| |||||||||||||||||
Sbjct: 538 caacgatctcgatgccggtgccggccggatgggcggcaccacccagtacaccgtcaacaa 597

                                                                       
Query: 62  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
           ||||||||||||||||||||| ||||||||||||||   |||||||||||| ||||||||
Sbjct: 598 ccagatggtgaacgccaccctcatgaacatcgccgacaaccccaccaacgtccagctccc 657

                                                                       
Query: 122 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            ||||||||||||||| | ||||||||||| ||||||||| |||||||||| ||||| ||
Sbjct: 658 cggcatgtacaacaagcaagagaacccccgcgtgcccatcatcgtcaccggcaacgactt 717

                                                                       
Query: 182 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
           ||| || |||||||| || || |||||||| |||||||||||||||||||||||||||||
Sbjct: 718 ctccaccctctacgcccccctcatccgtgacggtcgtatggagaagttctactgggctcc 777

                                                                       
Query: 242 cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
           |||| | || |||||  |||| |||||||  |||||||||  | ||||||| |||    |
Sbjct: 778 caccagggatgaccgggtcggcgtctgcaccggtatcttcaggtccgacaacgtccccaa 837

                                                                       
Query: 302 cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            |||  |||| ||||| |||||||||||||||| || |||||||||||||| ||||||||
Sbjct: 838 ggaggatgtcatcaagctcgtcgacaccttccccggccaatccattgacttcttcggtgc 897

                                                   
Query: 362 tctgcgtgctcgggtgtacgacgatgaggtgcgcaagtgg 401
            ||| | ||  |||| |||||||| |||||| | ||||||
Sbjct: 898 actgagggcgagggtctacgacgacgaggtgaggaagtgg 937



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 150/186 (80%)
 Strand = Plus / Plus

                                                                        
Query: 432  aagaggctggtgaactcgcgggacgggcccgtgaccttcgagcagccaaagatgacagtc 491
            ||||||||||||||||||| ||| |||||   ||| |||| |||||| ||||||||  | 
Sbjct: 968  aagaggctggtgaactcgctggaggggccgccgacgttcgcgcagcccaagatgaccctg 1027

                                                                        
Query: 492  gagaagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtg 551
            || |||||||| ||||||||  | ||||| || ||||| ||||| || || ||| | |||
Sbjct: 1028 gacaagctgctggagtacggcaatatgctggtgcaggaacaggagaacgtgaagagggtg 1087

                                                                        
Query: 552  cagcttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgatg 611
            ||||| || ||||  ||| ||||| |||||||||| ||||| || || ||||| ||||| 
Sbjct: 1088 cagctggccgacaagtacctgagcgaggcagctcttggtgacgccaatcaggacgcgatc 1147

                  
Query: 612  aagact 617
            ||||||
Sbjct: 1148 aagact 1153

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  293 bits (148), Expect = 3e-76
 Identities = 322/380 (84%)
 Strand = Plus / Plus

                                                                       
Query: 12  gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 71
           ||||| || |||||| | |||||||| ||||| |||||||| || |||||||||||||| 
Sbjct: 304 gacgccggcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccagatggtc 363

                                                                       
Query: 72  aacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtac 131
           ||||||||||||||||||||||||||   ||||||||||||||||||||| || ||||||
Sbjct: 364 aacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtac 423

                                                                       
Query: 132 aacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctc 191
           ||||||||||| |||||||| ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 424 aacaaggaggacaacccccgcgtgcccatcatcgtcaccggcaacgacttctccacgctc 483

                                                                       
Query: 192 tacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgac 251
           ||||| || || ||||| || || || |||||||||||||||||||| |||||||| || 
Sbjct: 484 tacgcgccgctcatccgcgacggccgcatggagaagttctactgggcgcccacccgcgag 543

                                                                       
Query: 252 gaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtc 311
           ||||| ||||| ||||||||||| |||||||  ||||||   |||   || |||   |||
Sbjct: 544 gaccgcatcggcgtctgcaagggcatcttccgcaccgacggcgtcgacgaggagcacgtc 603

                                                                       
Query: 312 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 371
           ||| || | |||||||||||||| || || ||||| ||||| ||||| || |||||||| 
Sbjct: 604 gtccagctggtcgacaccttccctggccagtccatcgacttcttcggcgcgctgcgtgcc 663

                               
Query: 372 cgggtgtacgacgatgaggt 391
           ||||| |||||||| |||||
Sbjct: 664 cgggtctacgacgacgaggt 683



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 123/150 (82%)
 Strand = Plus / Plus

                                                                       
Query: 468 ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 527
           ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 760 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 819

                                                                       
Query: 528 gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 587
           |||||||| || |||||||||||||||||||||||||  ||| | | | |||| ||||| 
Sbjct: 820 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 879

                                         
Query: 588 ggtgatgctaaccaggatgcgatgaagact 617
           ||||| || ||| |||| || |||||||||
Sbjct: 880 ggtgaagccaacgaggacgccatgaagact 909

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  285 bits (144), Expect = 8e-74
 Identities = 321/380 (84%)
 Strand = Plus / Plus

                                                                        
Query: 12   gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 71
            ||||| || |||||| | |||||||| ||||| |||||||| || |||||||||||||| 
Sbjct: 699  gacgccggcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccagatggtc 758

                                                                        
Query: 72   aacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtac 131
            ||||||||||||||||||||||||||   ||||||||||||||||||||| || ||||||
Sbjct: 759  aacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtac 818

                                                                        
Query: 132  aacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctc 191
            ||||||||||| |||||||| ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 819  aacaaggaggacaacccccgcgtgcccatcatcgtcaccggcaacgacttctccacgctc 878

                                                                        
Query: 192  tacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgac 251
            ||||| || || ||||| || || || |||||||||||||||||||| |||||||| || 
Sbjct: 879  tacgcgccgctcatccgcgacggccgcatggagaagttctactgggcgcccacccgcgag 938

                                                                        
Query: 252  gaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtgacgagtctgtc 311
            ||||| ||||| ||||||||||| |||||||  ||||||   |||   || |||   |||
Sbjct: 939  gaccgcatcggcgtctgcaagggcatcttccgcaccgacggcgtcgacgaggagcacgtc 998

                                                                        
Query: 312  gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 371
            ||| || | |||||||||||||| || || ||||| || || ||||| || |||||||| 
Sbjct: 999  gtccagctggtcgacaccttccctggccagtccatcgatttcttcggcgcgctgcgtgcc 1058

                                
Query: 372  cgggtgtacgacgatgaggt 391
            ||||| |||||||| |||||
Sbjct: 1059 cgggtctacgacgacgaggt 1078



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 123/150 (82%)
 Strand = Plus / Plus

                                                                        
Query: 468  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 527
            ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214

                                                                        
Query: 528  gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 587
            |||||||| || |||||||||||||||||||||||||  ||| | | | |||| ||||| 
Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274

                                          
Query: 588  ggtgatgctaaccaggatgcgatgaagact 617
            ||||| || ||| |||| || |||||||||
Sbjct: 1275 ggtgaagccaacgaggacgccatgaagact 1304

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 855  caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 914

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 915  ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 974

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 975  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 1034

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 1035 ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 1094

                                                    
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
             |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1095 gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 855  caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 914

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 915  ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 974

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 975  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 1034

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 1035 ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 1094

                                                    
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
             |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1095 gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1134

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
            transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 884  caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 943

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 944  ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 1003

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 1004 aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 1063

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 1064 ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 1123

                                                    
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
             |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1124 gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
            (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 766  caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 825

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 826  ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 885

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 886  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 945

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 946  ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 1005

                                                    
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
             |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1006 gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                       
Query: 2   caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
           ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 681 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 740

                                                                       
Query: 62  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
           ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 741 ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 800

                                                                       
Query: 122 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 801 aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 860

                                                                       
Query: 182 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
           ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 861 ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 920

                                                   
Query: 242 cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
            |||||||| ||||||||||||||||||||||||||||||
Sbjct: 921 gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 960

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Minus

                                                                         
Query: 2     caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
             ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 14433 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 14374

                                                                         
Query: 62    ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
             ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 14373 ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 14314

                                                                         
Query: 122   tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
              || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 14313 aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 14254

                                                                         
Query: 182   ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
             ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 14253 ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 14194

                                                     
Query: 242   cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
              |||||||| ||||||||||||||||||||||||||||||
Sbjct: 14193 gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 14154

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 769  caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 828

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 829  ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 888

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 889  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 948

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 949  ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 1008

                                                    
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
             |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1009 gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 766  caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 825

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 826  ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 885

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 886  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 945

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 946  ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 1005

                                                    
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
             |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1006 gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1045

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete cds
          Length = 1674

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 769  caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 828

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 829  ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 888

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 889  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 948

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 949  ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 1008

                                                    
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
             |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1009 gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1048

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  270 bits (136), Expect = 5e-69
 Identities = 244/280 (87%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 2850 caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 2909

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 2910 ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 2969

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 2970 aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 3029

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 3030 ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 3089

                                                    
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
             |||||||| ||||||||||||||||||||||||||||||
Sbjct: 3090 gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 3129

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  264 bits (133), Expect = 3e-67
 Identities = 247/285 (86%)
 Strand = Plus / Plus

                                                                       
Query: 6   gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 65
           ||||| || |||||||| ||| | ||||| |||||||| || ||||||||||||||||||
Sbjct: 569 gatctcgatgctggtgccggtcgtatgggaggaaccacccaatacaccgtcaacaaccag 628

                                                                       
Query: 66  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 125
           ||||| ||||| ||||| |||||||||||||||  |||||||||||| |||||||| || 
Sbjct: 629 atggttaacgctaccctcatgaacatcgccgataaccccaccaacgtccagctccccggt 688

                                                                       
Query: 126 atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 185
           |||||||||||||| |||||||||||||| |||||| ||||||| |||||||||||||| 
Sbjct: 689 atgtacaacaaggaagagaacccccgtgtccccatcatcgtcactggtaacgatttctcc 748

                                                                       
Query: 186 acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 245
           || || || |||||||| |||||||| |||||||||||||| || |||||||| || || 
Sbjct: 749 acactgtatgctcctctcatccgtgacggtcgtatggagaaattttactgggcaccaact 808

                                                        
Query: 246 cgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgac 290
            | ||||||||||||||||| ||||| ||||| |||  |||||||
Sbjct: 809 agggacgaccgtatcggtgtttgcaaaggtattttcaggaccgac 853



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 319 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 378
           |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 882 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 941

               
Query: 379 acga 382
           ||||
Sbjct: 942 acga 945

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score =  262 bits (132), Expect = 1e-66
 Identities = 300/356 (84%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 263 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 322

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 323 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 382

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           ||||||||||||||||||||||| ||||| ||||| ||||| ||||| || || || || 
Sbjct: 383 cgtgtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcgccgctcattcgc 442

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 443 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 502

                                                                       
Query: 270 aagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacc 329
           ||||| |||||||  ||||||   |||   ||||||   |||||| || |||||||| ||
Sbjct: 503 aagggcatcttccgcaccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgcc 562

                                                                   
Query: 330 ttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacga 385
           ||||| || || ||||| ||||| ||||| || || || || ||||||||||||||
Sbjct: 563 ttcccgggccagtccatcgacttcttcggcgccctccgcgcccgggtgtacgacga 618

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score =  262 bits (132), Expect = 1e-66
 Identities = 300/356 (84%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 271 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 330

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 331 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 390

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           ||||||||||||||||||||||| ||||| ||||| ||||| ||||| || || ||||| 
Sbjct: 391 cgtgtgcccatcgtcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgc 450

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| || ||||| ||||| || |||
Sbjct: 451 gacgggcgcatggacaagttctactgggcgcccacccgggaggaccgcatcggcgtgtgc 510

                                                                       
Query: 270 aagggtatcttccagaccgacaatgtcagtgacgagtctgtcgtcaagatcgtcgacacc 329
           ||||| |||||||  ||||||   |||   ||||||   |||||| || |||||||| ||
Sbjct: 511 aagggcatcttccgcaccgacggcgtccccgacgagcacgtcgtccagctcgtcgacgcc 570

                                                                   
Query: 330 ttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgacga 385
           ||||| || || ||||| ||||| ||||| || || || || ||||||||||||||
Sbjct: 571 ttcccgggccagtccatcgacttcttcggcgccctccgcgcccgggtgtacgacga 626

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  262 bits (132), Expect = 1e-66
 Identities = 243/280 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 758  caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 817

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||| ||
Sbjct: 818  ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagcttcc 877

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 878  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 937

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 938  ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 997

                                                    
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
             |||||||| ||||||||||||||||||||||||||||||
Sbjct: 998  gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1037

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  262 bits (132), Expect = 1e-66
 Identities = 243/280 (86%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 884  caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 943

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
             |||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 944  tcagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 1003

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 1004 aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 1063

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| || || ||||||||||| ||||||||||| ||||||||||||||||||||||| ||
Sbjct: 1064 ctccaccctatacgctcctctcatccgtgatggacgtatggagaagttctactgggcccc 1123

                                                    
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttc 281
             |||||||| ||||||||||||||||||||||||||||||
Sbjct: 1124 gacccgtgaagaccgtatcggtgtctgcaagggtatcttc 1163

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score =  256 bits (129), Expect = 8e-65
 Identities = 222/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 277 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 336

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 337 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 396

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||||
Sbjct: 397 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgt 456

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 457 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 516

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 517 aagggcatcttcc 529

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score =  256 bits (129), Expect = 8e-65
 Identities = 222/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 279 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 338

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 339 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 398

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||||
Sbjct: 399 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgt 458

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 459 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 518

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 519 aagggcatcttcc 531

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score =  256 bits (129), Expect = 8e-65
 Identities = 222/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 283 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 342

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 343 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 402

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||||
Sbjct: 403 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgt 462

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 463 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 522

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 523 aagggcatcttcc 535

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score =  256 bits (129), Expect = 8e-65
 Identities = 222/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 279 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 338

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 339 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 398

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||||
Sbjct: 399 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgt 458

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 459 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 518

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 519 aagggcatcttcc 531

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score =  256 bits (129), Expect = 8e-65
 Identities = 222/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 279 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 338

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 339 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 398

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||||
Sbjct: 399 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgt 458

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 459 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 518

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 519 aagggcatcttcc 531

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score =  256 bits (129), Expect = 8e-65
 Identities = 222/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 279 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 338

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 339 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 398

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||||
Sbjct: 399 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgt 458

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 459 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 518

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 519 aagggcatcttcc 531

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score =  256 bits (129), Expect = 8e-65
 Identities = 222/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 279 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 338

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 339 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 398

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||||
Sbjct: 399 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgt 458

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 459 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 518

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 519 aagggcatcttcc 531

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score =  256 bits (129), Expect = 8e-65
 Identities = 222/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 281 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 340

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 341 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 400

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||||
Sbjct: 401 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgt 460

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 461 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 520

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 521 aagggcatcttcc 533

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score =  248 bits (125), Expect = 2e-62
 Identities = 221/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 281 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 340

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 341 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 400

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| 
Sbjct: 401 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgc 460

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 461 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 520

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 521 aagggcatcttcc 533

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score =  248 bits (125), Expect = 2e-62
 Identities = 221/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 279 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 338

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 339 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 398

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| 
Sbjct: 399 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgc 458

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 459 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 518

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 519 aagggcatcttcc 531

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score =  248 bits (125), Expect = 2e-62
 Identities = 221/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 277 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 336

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 337 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 396

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| 
Sbjct: 397 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgc 456

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 457 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 516

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 517 aagggcatcttcc 529

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score =  248 bits (125), Expect = 2e-62
 Identities = 221/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 277 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 336

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 337 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 396

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| 
Sbjct: 397 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgc 456

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 457 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 516

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 517 aagggcatcttcc 529

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score =  248 bits (125), Expect = 2e-62
 Identities = 221/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 279 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 338

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 339 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 398

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| 
Sbjct: 399 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgc 458

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 459 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 518

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 519 aagggcatcttcc 531

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score =  248 bits (125), Expect = 2e-62
 Identities = 221/253 (87%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           |||||||| ||||| |||||||| || |||||||||||||||||||||||||||||||||
Sbjct: 283 atgggcggcaccacccagtacacggtgaacaaccagatggtgaacgccaccctgatgaac 342

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           ||||||||   ||||||||||||||||||||| || ||||||| ||||| ||| ||||| 
Sbjct: 343 atcgccgacaaccccaccaacgtgcagctcccggggatgtacagcaaggtggacaacccg 402

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| |||||||||| ||||| ||||| ||||| ||||| || || ||||| 
Sbjct: 403 cgtgtgcccatcatcgtcaccggcaacgacttctccacgctgtacgcgccgctcatccgc 462

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           || || || ||||| |||||||||||||| |||||||| |||||||| ||||| || |||
Sbjct: 463 gacgggcgcatggacaagttctactgggcgcccacccgcgacgaccgcatcggcgtgtgc 522

                        
Query: 270 aagggtatcttcc 282
           ||||| |||||||
Sbjct: 523 aagggcatcttcc 535

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  246 bits (124), Expect = 7e-62
 Identities = 247/288 (85%)
 Strand = Plus / Plus

                                                                       
Query: 3   aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 62
           |||||||| || |||||||| ||| | ||||| |||||||| || |||||||||||||||
Sbjct: 565 aacgatctcgatgctggtgccggtcgtatgggaggaaccacccaatacaccgtcaacaac 624

                                                                       
Query: 63  cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 122
           |||||||| || || ||||| |||||||||||||||  |||||||||||| |||||||| 
Sbjct: 625 cagatggttaatgctaccctcatgaacatcgccgataaccccaccaacgtccagctcccc 684

                                                                       
Query: 123 ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 182
           || |||||||||||||| |||||||||||||| |||||  ||||||| ||||||||||||
Sbjct: 685 ggtatgtacaacaaggaagagaacccccgtgtccccattatcgtcactggtaacgatttc 744

                                                                       
Query: 183 tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctccc 242
           || || || || |||||||| |||||||| |||||||||||||| || |||||||| || 
Sbjct: 745 tccacactgtatgctcctctcatccgtgacggtcgtatggagaaattttactgggcacca 804

                                                           
Query: 243 acccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgac 290
           ||  | ||||||||| ||||||| ||||| ||||| |||  |||||||
Sbjct: 805 actagggacgaccgtgtcggtgtttgcaaaggtattttcaggaccgac 852



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 54/64 (84%)
 Strand = Plus / Plus

                                                                       
Query: 319 tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 378
           |||||||||||||||| || |||||||| || || ||||||||  || | |||||||| |
Sbjct: 881 tcgtcgacaccttccccggccaatccatcgatttcttcggtgccttgagggctcgggttt 940

               
Query: 379 acga 382
           ||||
Sbjct: 941 acga 944

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  246 bits (124), Expect = 7e-62
 Identities = 301/360 (83%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| ||||| ||||| ||  | ||||| || ||||| || |||||||| |||||
Sbjct: 805  caacgatctcgacgcgggtgctggacgtatgggaggcaccacacaatacaccgtgaacaa 864

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| ||||||||||| |||||||| || ||   ||||||||| || || |||||
Sbjct: 865  ccagatggttaacgccaccctcatgaacattgctgacaaccccaccaatgtccaactccc 924

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            ||| |||||||||||| | |||||| ||||||| |||||  ||||||| |||||||| ||
Sbjct: 925  tggtatgtacaacaagcaagagaacgcccgtgttcccattatcgtcactggtaacgactt 984

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||  | |||||||| || ||||||||||||||||||||||||||||||||||||||
Sbjct: 985  ctccaccttgtacgctccccttatccgtgatggtcgtatggagaagttctactgggctcc 1044

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            ||||||||| ||||||||||||||   ||  |||||||||  ||||||||||||   |||
Sbjct: 1045 cacccgtgaggaccgtatcggtgttgccaccggtatcttcaggaccgacaatgttcctga 1104

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
             ||    || |||||| |||||||||||||||| || ||||| ||||| || ||||||||
Sbjct: 1105 ggaccacgttgtcaagctcgtcgacaccttccctggccaatctattgatttcttcggtgc 1164

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  246 bits (124), Expect = 7e-62
 Identities = 233/271 (85%)
 Strand = Plus / Plus

                                                                       
Query: 12  gacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtg 71
           ||||| || |||||| | |||||||| ||||| |||||||| || |||||||||||||| 
Sbjct: 699 gacgccggcgcgggtcgcatgggcggcaccacccagtacacggtgaacaaccagatggtc 758

                                                                       
Query: 72  aacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtac 131
           ||||||||||||||||||||||||||   ||||||||||||||||||||| || ||||||
Sbjct: 759 aacgccaccctgatgaacatcgccgacaaccccaccaacgtgcagctcccggggatgtac 818

                                                                       
Query: 132 aacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctc 191
           ||||||||||| ||     | ||||||||| |||||||||| ||||| ||||| ||||||
Sbjct: 819 aacaaggaggacaannnnngcgtgcccatcatcgtcaccggcaacgacttctccacgctc 878

                                                                       
Query: 192 tacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccgtgac 251
           ||||| || || ||||| || || || |||||||||||||||||||| |||||||| || 
Sbjct: 879 tacgcgccgctcatccgcgacggccgcatggagaagttctactgggcgcccacccgcgag 938

                                          
Query: 252 gaccgtatcggtgtctgcaagggtatcttcc 282
           ||||| ||||| ||||||||||| |||||||
Sbjct: 939 gaccgcatcggcgtctgcaagggcatcttcc 969



 Score = 83.8 bits (42), Expect = 6e-13
 Identities = 123/150 (82%)
 Strand = Plus / Plus

                                                                        
Query: 468  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 527
            ||||||||||| ||||| ||  ||||||||||  | |||||||| |||||||| ||   |
Sbjct: 1155 ttcgagcagcccaagataacgatcgagaagctcttggagtacggacacatgctggtggcg 1214

                                                                        
Query: 528  gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 587
            |||||||| || |||||||||||||||||||||||||  ||| | | | |||| ||||| 
Sbjct: 1215 gagcaggagaacgtcaagcgtgtgcagcttgctgacaagtacctcaacgaggctgctctt 1274

                                          
Query: 588  ggtgatgctaaccaggatgcgatgaagact 617
            ||||| || ||| |||| || |||||||||
Sbjct: 1275 ggtgaagccaacgaggacgccatgaagact 1304

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
            activase 1 mRNA, complete cds
          Length = 1559

 Score =  234 bits (118), Expect = 3e-58
 Identities = 250/294 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| |||||||| || ||| | ||||| |||||||| || ||||| || |||||
Sbjct: 750  caacgatctcgacgctggagccggtcgtatgggaggaaccacacaatacacagtgaacaa 809

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||| |||||||||||||| || ||||||||||| |||  |||||||||||| ||||||||
Sbjct: 810  ccaaatggtgaacgccacactcatgaacatcgctgataaccccaccaacgttcagctccc 869

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||||| ||||| || ||| | |||||||||||||||||
Sbjct: 870  cggtatgtacaacaaggaagagaaccctcgtgttccgatcattgtcaccggtaacgattt 929

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||||||||| ||||| || || |||||||| ||||||||||||||||| |||||||| ||
Sbjct: 930  ctcgacgctgtacgcgccgctcatccgtgacggtcgtatggagaagttttactgggcacc 989

                                                                  
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 295
            |||| | || ||  | |||||||| ||||  ||||| |||  ||||||||||||
Sbjct: 990  caccagggaagataggatcggtgtttgcacaggtattttcaggaccgacaatgt 1043



 Score = 67.9 bits (34), Expect = 4e-08
 Identities = 40/42 (95%)
 Strand = Plus / Plus

                                                      
Query: 324  gacaccttcccaggacaatccattgactttttcggtgctctg 365
            ||||||||||| || |||||||||||||||||||||||||||
Sbjct: 1072 gacaccttcccgggccaatccattgactttttcggtgctctg 1113

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  226 bits (114), Expect = 7e-56
 Identities = 249/294 (84%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| |||||||| || ||| | ||||| ||||| || || ||||| || |||||
Sbjct: 750  caacgatctcgacgctggagctggtcgtatgggtggaacaactcaatacactgttaacaa 809

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            |||||||||||| |||||||| |||||||| || ||   ||| || || || ||||||||
Sbjct: 810  ccagatggtgaatgccaccctcatgaacattgctgacaacccaacaaatgtccagctccc 869

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            ||| |||||||||||||| |||||||| |||||||| ||| | ||||| |||||||| ||
Sbjct: 870  tggtatgtacaacaaggaagagaaccctcgtgtgcctatcattgtcactggtaacgactt 929

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||||||  | ||||||||||| |||||||||||||||||||| || ||||||||||||||
Sbjct: 930  ctcgacattgtacgctcctcttatccgtgatggtcgtatggaaaaattctactgggctcc 989

                                                                  
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgt 295
             ||| | || |||||||| ||||||||||||||||| |||  ||| ||||||||
Sbjct: 990  taccagggaagaccgtattggtgtctgcaagggtattttcaggactgacaatgt 1043



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                              
Query: 558  gctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgc 607
            |||||||  ||||||||  |||| || || ||||||||||||||||||||
Sbjct: 1306 gctgacaagtacatgagtgaggctgcccttggtgatgctaaccaggatgc 1355

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase activase
            mRNA
          Length = 1853

 Score =  224 bits (113), Expect = 3e-55
 Identities = 230/269 (85%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            |||||||||||| || || || ||| || | || |||||||| || ||||| ||||||||
Sbjct: 766  caacgatcttgatgcaggagctggtcggcttggtggaaccacccaatacactgtcaacaa 825

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||| |||||||| |||||||| |||||||| || |||  ||| || ||||| ||||| ||
Sbjct: 826  ccaaatggtgaatgccaccctcatgaacattgctgataacccgacaaacgtccagcttcc 885

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || ||||||||||||||||||||||||||||| || ||| | |||||||||||||||||
Sbjct: 886  aggtatgtacaacaaggaggagaacccccgtgtcccaatcattgtcaccggtaacgattt 945

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||  | ||||||||||| |||||||| |||||||||||||||||||||||||||||
Sbjct: 946  ctcaacattgtacgctcctctcatccgtgacggtcgtatggagaagttctactgggctcc 1005

                                         
Query: 242  cacccgtgacgaccgtatcggtgtctgca 270
            |||||| || || ||||| || |||||||
Sbjct: 1006 cacccgcgaagatcgtattggagtctgca 1034



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 106/132 (80%)
 Strand = Plus / Plus

                                                                        
Query: 468  ttcgagcagccaaagatgacagtcgagaagctgctagagtacgggcacatgctcgtccag 527
            ||||||||||| ||||||||  |||| ||||| || ||||||||  ||||||| ||||| 
Sbjct: 1232 ttcgagcagccgaagatgactatcgaaaagctcctcgagtacggaaacatgcttgtccaa 1291

                                                                        
Query: 528  gagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgagccaggcagctctg 587
            ||||| || ||||| ||| | || ||  | ||||| |  ||| ||||| |||| ||||| 
Sbjct: 1292 gagcaagagaatgtgaagagagttcaattggctgataagtacttgagcgaggctgctctt 1351

                        
Query: 588  ggtgatgctaac 599
            ||||||||||||
Sbjct: 1352 ggtgatgctaac 1363



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 64/78 (82%)
 Strand = Plus / Plus

                                                                        
Query: 324  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 383
            |||||||||||||| ||||| ||||| || || |||||  || | ||| |||| ||||||
Sbjct: 1088 gacaccttcccaggccaatctattgatttctttggtgccttgagggctagggtttacgac 1147

                              
Query: 384  gatgaggtgcgcaagtgg 401
            ||||| ||| | ||||||
Sbjct: 1148 gatgaagtgaggaagtgg 1165

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  202 bits (102), Expect = 1e-48
 Identities = 216/254 (85%)
 Strand = Plus / Plus

                                                                        
Query: 36   ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 95
            |||||||| || ||||| || ||||||||||||||||| ||||| || |||||||| || 
Sbjct: 789  ggaaccacccaatacactgtgaacaaccagatggtgaatgccactctcatgaacattgct 848

                                                                        
Query: 96   gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtg 155
            |||  |||||| || |||||||| ||||| |||||||||||||| || ||| ||||||||
Sbjct: 849  gataaccccacaaatgtgcagcttcctggtatgtacaacaaggaagataacgcccgtgtg 908

                                                                        
Query: 156  cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 215
            |||||| | ||||| |||||||||||||| || || || |||||||| ||||||||||||
Sbjct: 909  cccatcattgtcactggtaacgatttctcaacactttatgctcctctcatccgtgatggt 968

                                                                        
Query: 216  cgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggt 275
            ||||||||||||||||||||||| || ||  | || ||||| || ||||| |||||||| 
Sbjct: 969  cgtatggagaagttctactgggcaccaacaagggaagaccgcattggtgtttgcaaggga 1028

                          
Query: 276  atcttccagaccga 289
            || |||| ||||||
Sbjct: 1029 attttccggaccga 1042

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  196 bits (99), Expect = 6e-47
 Identities = 204/239 (85%)
 Strand = Plus / Plus

                                                                        
Query: 30   atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
            ||||| || ||||| || |||||||| |||||||||||||| |||||||| || ||||||
Sbjct: 2575 atgggaggcaccacccaatacaccgtaaacaaccagatggttaacgccacactcatgaac 2634

                                                                        
Query: 90   atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
            || || ||   ||| ||||| || || |||||||| |||||||||||| |||| ||  ||
Sbjct: 2635 attgctgacaacccaaccaatgtccaactccctggtatgtacaacaagcaggacaatgcc 2694

                                                                        
Query: 150  cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
            ||||| |||||| | || || |||||||||||||| ||  | |||||||| || ||||||
Sbjct: 2695 cgtgtccccatcattgttactggtaacgatttctccaccttgtacgctccccttatccgt 2754

                                                                       
Query: 210  gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctg 268
            ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 2755 gatggtcgtatggagaagttctactgggctcccacccgtgaggaccgtattggtgtctg 2813

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  192 bits (97), Expect = 9e-46
 Identities = 205/241 (85%)
 Strand = Plus / Plus

                                                                       
Query: 30  atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
           ||||| |||||||| || ||||| ||||||||||| |||||||| ||||| || ||||||
Sbjct: 216 atgggtggaaccacacaatacactgtcaacaaccaaatggtgaatgccacactcatgaac 275

                                                                       
Query: 90  atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
           || || |||  ||||||||| || || |||||||| |||||||||||||| || ||  | 
Sbjct: 276 attgctgataaccccaccaatgtccaactccctggtatgtacaacaaggaagacaatgct 335

                                                                       
Query: 150 cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
           |||||||||||| | ||||||||||| |||||||| || || || |||||||| ||||||
Sbjct: 336 cgtgtgcccatcattgtcaccggtaatgatttctcaacactttatgctcctctcatccgt 395

                                                                       
Query: 210 gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
           |||||||||||||||||||||||||||||||| ||  | || || ||||| |||||||||
Sbjct: 396 gatggtcgtatggagaagttctactgggctcctactagagaagatcgtattggtgtctgc 455

            
Query: 270 a 270
           |
Sbjct: 456 a 456



 Score = 48.1 bits (24), Expect = 0.034
 Identities = 75/92 (81%)
 Strand = Plus / Plus

                                                                       
Query: 312 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgct 371
           |||||||| || ||||||||||| || |||||||| || || ||||||||  || | |||
Sbjct: 498 gtcaagattgttgacaccttccctggccaatccatcgatttcttcggtgcattgagggct 557

                                           
Query: 372 cgggtgtacgacgatgaggtgcgcaagtgggt 403
            | |||||||| ||||| ||| | ||||||||
Sbjct: 558 agagtgtacgatgatgaagtgaggaagtgggt 589

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  190 bits (96), Expect = 4e-45
 Identities = 204/240 (85%)
 Strand = Plus / Plus

                                                                       
Query: 2   caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
           |||||||||||| |||||||| ||||| ||||| ||||| || || ||||| ||||||||
Sbjct: 180 caacgatcttgatgctggtgcaggtagaatgggaggaactacacaatacacagtcaacaa 239

                                                                       
Query: 62  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            |||||||| || || || || |||||||| || |||  ||| ||||| || || |||||
Sbjct: 240 tcagatggttaatgctacactcatgaacattgctgataacccaaccaatgtccaactccc 299

                                                                       
Query: 122 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
           ||| |||||| ||||||||||||||||||||||||||||| ||||||| || ||||||||
Sbjct: 300 tggaatgtacgacaaggaggagaacccccgtgtgcccatcatcgtcacaggaaacgattt 359

                                                                       
Query: 182 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
           |||  | || || ||||| || ||||| |||||||||||||| |||||||||||||||||
Sbjct: 360 ctcagcactatatgctccccttatccgcgatggtcgtatggaaaagttctactgggctcc 419

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  188 bits (95), Expect = 1e-44
 Identities = 176/203 (86%)
 Strand = Plus / Plus

                                                                       
Query: 36  ggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgcc 95
           |||||||| || ||||| || ||||||||||||||||| ||||| || |||||||| || 
Sbjct: 793 ggaaccacccaatacactgtgaacaaccagatggtgaatgccactctcatgaacattgct 852

                                                                       
Query: 96  gatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtg 155
           |||  ||| || || |||||||| ||||| |||||||||||||| |||||| ||||||||
Sbjct: 853 gataaccctacaaatgtgcagcttcctggtatgtacaacaaggaagagaacgcccgtgtg 912

                                                                       
Query: 156 cccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggt 215
           |||||| | ||||||||||| |||||||| ||||| || |||||||| || |||||||| 
Sbjct: 913 cccatcattgtcaccggtaatgatttctcaacgctgtatgctcctctcattcgtgatggg 972

                                  
Query: 216 cgtatggagaagttctactgggc 238
           |||||||||||||||||||||||
Sbjct: 973 cgtatggagaagttctactgggc 995

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  188 bits (95), Expect = 1e-44
 Identities = 203/239 (84%)
 Strand = Plus / Plus

                                                                        
Query: 30   atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
            ||||| || ||||| || |||||||| |||||||||||||| |||||||| ||  |||||
Sbjct: 947  atgggaggcaccacccaatacaccgtaaacaaccagatggttaacgccacactcctgaac 1006

                                                                        
Query: 90   atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
            || || ||   ||| ||||| || || |||||||| |||||||||||| |||| ||  ||
Sbjct: 1007 attgctgacaacccaaccaatgtccaactccctggtatgtacaacaagcaggacaatgcc 1066

                                                                        
Query: 150  cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
            ||||| |||||| | || || |||||||||||||| ||  | |||||||| || ||||||
Sbjct: 1067 cgtgtccccatcattgttactggtaacgatttctccaccttgtacgctccccttatccgt 1126

                                                                       
Query: 210  gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctg 268
            ||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||
Sbjct: 1127 gatggtcgtatggagaagttctactgggctcccacccgtgaggaccgtattggtgtctg 1185



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 58/70 (82%)
 Strand = Plus / Plus

                                                                        
Query: 319  tcgtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgt 378
            |||| ||| ||||||| |||||||| || ||||||||||| ||  || | ||||| || |
Sbjct: 1236 tcgttgacgccttccctggacaatctatcgactttttcggagcgttgagggctcgtgtat 1295

                      
Query: 379  acgacgatga 388
            ||||||||||
Sbjct: 1296 acgacgatga 1305

---

>gb|AF173678.1|AF173678 Beta vulgaris clone RAC109UNI ribulose bisphosphate carboxylase
           activase (Rca) gene, partial sequence
          Length = 648

 Score =  182 bits (92), Expect = 9e-43
 Identities = 209/248 (84%)
 Strand = Plus / Plus

                                                                       
Query: 49  acaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccacca 108
           |||| ||||||||||||||||| ||||||||||| |||||||| || ||   ||| ||||
Sbjct: 1   acactgtcaacaaccagatggttaacgccaccctcatgaacattgctgacaacccaacca 60

                                                                       
Query: 109 acgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtca 168
           | || ||||||||||| |||||||||||| |||| ||  | ||||| |||||| |||| |
Sbjct: 61  atgtccagctccctggtatgtacaacaagcaggacaatgctcgtgtacccatcatcgtta 120

                                                                       
Query: 169 ccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagt 228
           | |||||||| ||||| ||  | || |||||||| ||||||||||||||||||||||| |
Sbjct: 121 ctggtaacgacttctctaccttgtatgctcctctcatccgtgatggtcgtatggagaaat 180

                                                                       
Query: 229 tctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccg 288
           |||||||||| ||||| ||||| |||||||| ||||| ||||  |||||||||  ||| |
Sbjct: 181 tctactgggcacccactcgtgaggaccgtattggtgtttgcactggtatcttcaggactg 240

                   
Query: 289 acaatgtc 296
           ||||||||
Sbjct: 241 acaatgtc 248

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  180 bits (91), Expect = 4e-42
 Identities = 226/269 (84%), Gaps = 4/269 (1%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||||||||||||||||||| | ||||| || || || |||||||| ||||||||
Sbjct: 750  caacgatcttgacgctggtgcgggtcgtatgggtggtactactcagtacactgtcaacaa 809

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| ||||| || || |||||||| || |||  ||| |||||||| ||||||||
Sbjct: 810  ccagatggttaacgcaacactcatgaacattgctgataacccaaccaacgtccagctccc 869

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||||| |||||| | ||||| |||||| |   ||| |||||||||||
Sbjct: 870  aggaatgtacaacaaggaagagaacgcacgtgtccccatcatttgcactggtaacgattt 929

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttct--actgggct 239
            ||| ||  | |||| |||||| |||| |||||| ||||||||||||||||  |||||   
Sbjct: 930  ctccaccttatacggtcctctcatccttgatggacgtatggagaagttcttgactgg--c 987

                                         
Query: 240  cccacccgtgacgaccgtatcggtgtctg 268
            || |||||||| |||||||||||||||||
Sbjct: 988  ccgacccgtgaagaccgtatcggtgtctg 1016

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score =  172 bits (87), Expect = 9e-40
 Identities = 315/391 (80%)
 Strand = Plus / Plus

                                                                       
Query: 2   caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
           ||||||||| || || || || ||||| ||||| ||||| || || ||||| ||||||||
Sbjct: 72  caacgatctcgatgcaggagctggtagaatgggtggaactacccaatacactgtcaacaa 131

                                                                       
Query: 62  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
           |||||||||||| ||||| || ||||||||||| |||  ||| || || || ||||||||
Sbjct: 132 ccagatggtgaatgccactctcatgaacatcgctgataacccgacaaatgtccagctccc 191

                                                                       
Query: 122 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            || |||||||||||| | |||||| || | || |||||  | ||||| |||||||| ||
Sbjct: 192 cggtatgtacaacaagcaagagaacgccagggtccccattattgtcactggtaacgactt 251

                                                                       
Query: 182 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
           ||| ||  | || |||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 252 ctccacattgtatgctcctcttatccgtgatggtcgtatggagaagttctattgggcacc 311

                                                                       
Query: 242 cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
            ||  | || ||  | || ||||| ||||||||||| |||  ||||||||| ||   |||
Sbjct: 312 aactagggaagatagaattggtgtttgcaagggtattttcaggaccgacaacgtgcctga 371

                                                                       
Query: 302 cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
            ||  |||| || ||||| ||||| |||||||| |||||||| |||||||| || |||||
Sbjct: 372 ggaagctgttgtaaagattgtcgataccttccctggacaatctattgacttctttggtgc 431

                                          
Query: 362 tctgcgtgctcgggtgtacgacgatgaggtg 392
           |||| | || || || ||||| |||||||||
Sbjct: 432 tctgagggcacgagtatacgatgatgaggtg 462

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score =  165 bits (83), Expect = 2e-37
 Identities = 233/283 (82%)
 Strand = Plus / Plus

                                                                       
Query: 2   caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
           ||||||||| ||||| ||||| ||  | |||||||  ||||| ||||||||||| |||||
Sbjct: 650 caacgatctggacgccggtgccggccgcatgggcgacaccacccagtacaccgtgaacaa 709

                                                                       
Query: 62  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
           ||||||||||||||||||||||||||||||||||||   ||| |||||||| ||||| ||
Sbjct: 710 ccagatggtgaacgccaccctgatgaacatcgccgacaacccgaccaacgtccagctgcc 769

                                                                       
Query: 122 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            ||  ||||||| || ||||||| ||| || |||||||| ||   ||| || ||||| ||
Sbjct: 770 cggtgtgtacaagaacgaggagatccctcgcgtgcccattgtgtgcacgggcaacgactt 829

                                                                       
Query: 182 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
           ||| || || ||||| || |||||||| ||||| || |||||||||| |||||||   ||
Sbjct: 830 ctccaccctgtacgcgcccctgatccgcgatggccgcatggagaagtactactggaaccc 889

                                                      
Query: 242 cacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 284
           |||||| || ||||| ||||| || |||| ||| |||||||||
Sbjct: 890 cacccgcgaggaccgcatcggcgtgtgcatgggcatcttccag 932



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 324  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 383
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 972  gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 1031

              
Query: 384  ga 385
            ||
Sbjct: 1032 ga 1033

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1) mRNA,
            complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  163 bits (82), Expect = 8e-37
 Identities = 202/242 (83%)
 Strand = Plus / Plus

                                                                        
Query: 30   atgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctgatgaac 89
            ||||| ||||| || || ||||| || ||||| ||||||||||| |||||||| ||||||
Sbjct: 778  atgggtggaacaactcaatacactgttaacaatcagatggtgaatgccaccctcatgaac 837

                                                                        
Query: 90   atcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggagaacccc 149
            || || ||   ||| || || || ||||| |||||||||||||||||||| |||||||| 
Sbjct: 838  atagctgacaacccaacaaatgtccagcttcctggcatgtacaacaaggaagagaaccct 897

                                                                        
Query: 150  cgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctgatccgt 209
            ||||| |||||| | ||||| |||||||| ||||| ||  | || || ||||| ||||||
Sbjct: 898  cgtgttcccatcattgtcactggtaacgacttctcaacattgtatgcccctcttatccgt 957

                                                                        
Query: 210  gatggtcgtatggagaagttctactgggctcccacccgtgacgaccgtatcggtgtctgc 269
            ||||| ||||||||||| ||||||||||| |||||| | || |||||||| |||||||||
Sbjct: 958  gatggccgtatggagaaattctactgggcacccaccagggaggaccgtattggtgtctgc 1017

              
Query: 270  aa 271
            ||
Sbjct: 1018 aa 1019



 Score = 40.1 bits (20), Expect = 8.4
 Identities = 68/84 (80%)
 Strand = Plus / Plus

                                                                        
Query: 515  catgctcgtccaggagcaggacaatgtcaagcgtgtgcagcttgctgacacctacatgag 574
            |||||| |||||||||||||| || |||||| | || ||  | |||||||  ||||||  
Sbjct: 1263 catgcttgtccaggagcaggagaacgtcaagagagttcaattagctgacaaatacatgtc 1322

                                    
Query: 575  ccaggcagctctgggtgatgctaa 598
            | |||| ||||| |||||||||||
Sbjct: 1323 cgaggctgctcttggtgatgctaa 1346

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score =  159 bits (80), Expect = 1e-35
 Identities = 200/240 (83%)
 Strand = Plus / Plus

                                                                        
Query: 45   cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 104
            |||||||| ||||||||||||||||| ||||| ||||| ||||||||||| |||  ||| 
Sbjct: 1622 cagtacactgtcaacaaccagatggtcaacgctaccctcatgaacatcgctgataaccct 1681

                                                                        
Query: 105  accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 164
            |||||||||||||| || ||| |||||||  ||| | |||  |||||||| ||||| |||
Sbjct: 1682 accaacgtgcagctgcccggcgtgtacaaggaggtgcagattccccgtgttcccattgtc 1741

                                                                        
Query: 165  gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 224
              ||| |||||||||||||| || || ||||| || || |||||||| || || ||||||
Sbjct: 1742 tgcacgggtaacgatttctccaccctgtacgcccccctcatccgtgacggccgcatggag 1801

                                                                        
Query: 225  aagttctactgggctcccacccgtgacgaccgtatcggtgtctgcaagggtatcttccag 284
            |||| |||||||   ||||||||||| ||||| ||||| ||||||| ||| |||||||||
Sbjct: 1802 aagtactactggaaccccacccgtgaggaccgcatcggcgtctgcatgggaatcttccag 1861



 Score = 42.1 bits (21), Expect = 2.1
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                         
Query: 528  gagcaggacaatgtcaagcgtgtgcagct 556
            |||||||| ||||||||||| ||||||||
Sbjct: 2105 gagcaggagaatgtcaagcgcgtgcagct 2133

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
            (pJQ4)
          Length = 1655

 Score =  157 bits (79), Expect = 5e-35
 Identities = 313/391 (80%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| || || || || ||||| ||||| ||||| || || ||||| ||||||||
Sbjct: 716  caacgatctcgatgcaggagctggtagaatgggtggaactacccaatacactgtcaacaa 775

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            |||||||||||| ||||| || |||||||| || |||  ||| || ||||| ||||||||
Sbjct: 776  ccagatggtgaatgccactctcatgaacattgctgataacccgacaaacgtccagctccc 835

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             || |||||||||||| | |||||| || | || |||||  | ||||| |||||||| ||
Sbjct: 836  cggtatgtacaacaagcaagagaacgccagagtccccattattgtcactggtaacgactt 895

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||  | || |||||||| ||||||||||||||||||||||||||||| ||||| ||
Sbjct: 896  ctccacattgtatgctcctcttatccgtgatggtcgtatggagaagttctattgggcacc 955

                                                                        
Query: 242  cacccgtgacgaccgtatcggtgtctgcaagggtatcttccagaccgacaatgtcagtga 301
             ||  | || ||  | || ||||| ||||||||||| |||  ||||||||| ||   |||
Sbjct: 956  aactagggaagatagaattggtgtttgcaagggtattttcaggaccgacaacgtgcctga 1015

                                                                        
Query: 302  cgagtctgtcgtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
             ||  | ||  | ||||| ||||| |||||||| |||||||| |||||||| || |||||
Sbjct: 1016 ggaagccgttataaagattgtcgataccttccctggacaatctattgacttctttggtgc 1075

                                           
Query: 362  tctgcgtgctcgggtgtacgacgatgaggtg 392
            |||| | || || || ||||| |||||||||
Sbjct: 1076 tctgagggcacgagtatacgatgatgaggtg 1106

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  153 bits (77), Expect = 8e-34
 Identities = 197/237 (83%)
 Strand = Plus / Plus

                                                                       
Query: 2   caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
           ||||||||| || || || || ||||| ||||| ||||| || || ||||||||||||||
Sbjct: 727 caacgatctcgatgcaggagctggtagaatgggtggaactacccaatacaccgtcaacaa 786

                                                                       
Query: 62  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
           |||||||||||| |||||||| |||||||| || ||   ||| || || || ||||||||
Sbjct: 787 ccagatggtgaatgccaccctcatgaacattgctgacaacccaacaaatgtccagctccc 846

                                                                       
Query: 122 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            || |||||||||||| | |||||| || | || |||||  | ||||| |||||||| ||
Sbjct: 847 cggtatgtacaacaagcaagagaacgccagggtacccattattgtcactggtaacgactt 906

                                                                    
Query: 182 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggc 238
           ||| ||  | || |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 907 ctccacattgtatgctcctcttatccgtgatggtcgtatggagaagttctactgggc 963

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  151 bits (76), Expect = 3e-33
 Identities = 226/276 (81%)
 Strand = Plus / Plus

                                                                       
Query: 6   gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 65
           |||||||| || ||||| |||||| | || || || || || ||||| || |||||||| 
Sbjct: 597 gatcttgatgcaggtgccggtaggcttggtgggacaactcaatacactgtgaacaaccaa 656

                                                                       
Query: 66  atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 125
           |||||||| || ||||| |||||||| || ||    || ||||| || |||||||| || 
Sbjct: 657 atggtgaatgctaccctcatgaacattgctgacaatccaaccaatgttcagctcccgggt 716

                                                                       
Query: 126 atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 185
           |||||||||||||| ||||| || ||||| || ||| ||||||| ||||| || ||||||
Sbjct: 717 atgtacaacaaggaagagaatccacgtgtaccgatcatcgtcacaggtaatgacttctcg 776

                                                                       
Query: 186 acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 245
           ||  | ||||||||||| || |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 777 acattgtacgctcctctcattcgtgatggtcgtatggagaaattctactgggcgcccacc 836

                                               
Query: 246 cgtgacgaccgtatcggtgtctgcaagggtatcttc 281
            | || ||||| || ||||||||||  |||||||||
Sbjct: 837 agagaagaccgaattggtgtctgcactggtatcttc 872

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  151 bits (76), Expect = 3e-33
 Identities = 226/276 (81%)
 Strand = Plus / Plus

                                                                        
Query: 6    gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 65
            |||||||| || ||||| |||||| | || || || || || ||||| || |||||||| 
Sbjct: 770  gatcttgatgcaggtgccggtaggcttggtgggacaactcaatacactgtgaacaaccaa 829

                                                                        
Query: 66   atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 125
            |||||||| || ||||| |||||||| || ||    || ||||| || |||||||| || 
Sbjct: 830  atggtgaatgctaccctcatgaacattgctgacaatccaaccaatgttcagctcccgggt 889

                                                                        
Query: 126  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 185
            |||||||||||||| ||||| || ||||| || ||| ||||||| ||||| || ||||||
Sbjct: 890  atgtacaacaaggaagagaatccacgtgtaccgatcatcgtcacaggtaatgacttctcg 949

                                                                        
Query: 186  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 245
            ||  | ||||||||||| || |||||||||||||||||||| ||||||||||| ||||||
Sbjct: 950  acattgtacgctcctctcattcgtgatggtcgtatggagaaattctactgggcgcccacc 1009

                                                
Query: 246  cgtgacgaccgtatcggtgtctgcaagggtatcttc 281
             | || ||||| || ||||||||||  |||||||||
Sbjct: 1010 agagaagaccgaattggtgtctgcactggtatcttc 1045

---

>gb|DQ124098.1| Coffea arabica clone MN-SSH2-F02 mRNA sequence
          Length = 253

 Score =  133 bits (67), Expect = 8e-28
 Identities = 124/143 (86%)
 Strand = Plus / Plus

                                                                       
Query: 128 gtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgac 187
           ||||||||| || |||||||||||||||||| || | ||||||||||| |||||||| ||
Sbjct: 1   gtacaacaaagaagagaacccccgtgtgcccgtcattgtcaccggtaatgatttctccac 60

                                                                       
Query: 188 gctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacccg 247
             | || ||||| || ||||||||||||||||||||||| ||||||||||| || |||||
Sbjct: 61  cttgtatgctccccttatccgtgatggtcgtatggagaaattctactgggcaccaacccg 120

                                  
Query: 248 tgacgaccgtatcggtgtctgca 270
            ||||| ||||| ||||||||||
Sbjct: 121 cgacgatcgtattggtgtctgca 143

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score =  121 bits (61), Expect = 3e-24
 Identities = 193/237 (81%)
 Strand = Plus / Plus

                                                                       
Query: 2   caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
           ||||||||| || || || || ||||| ||||| ||||| || || ||||| ||||||||
Sbjct: 746 caacgatctcgatgcaggagctggtagaatgggtggaactacccaatacactgtcaacaa 805

                                                                       
Query: 62  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
           ||| |||||||| ||||| || |||||||| || ||   ||| || || || ||||||||
Sbjct: 806 ccaaatggtgaatgccactctcatgaacattgctgacaacccgacaaatgtccagctccc 865

                                                                       
Query: 122 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            || |||||||||||| | |||||  || | || || ||  ||||||| |||||||||||
Sbjct: 866 cggtatgtacaacaagcaagagaatgccagggtccctattatcgtcactggtaacgattt 925

                                                                    
Query: 182 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggc 238
           ||| ||  | || ||||| || |||||||||||||||||||||||||||||||||||
Sbjct: 926 ctccacattgtatgctccacttatccgtgatggtcgtatggagaagttctactgggc 982

---

>emb|Z14979.1|NTRCAJQ11 N.tabacum Rca gene for ribulose bisphosphate carboxyase activase
           (pJQ11)
          Length = 883

 Score =  117 bits (59), Expect = 4e-23
 Identities = 176/215 (81%)
 Strand = Plus / Plus

                                                                       
Query: 24  ggtaggatgggcggaaccacgcagtacaccgtcaacaaccagatggtgaacgccaccctg 83
           ||||| ||||| ||||| || || ||||| ||||||||||| |||||||| ||||| || 
Sbjct: 8   ggtagaatgggtggaactacccaatacactgtcaacaaccaaatggtgaatgccactctc 67

                                                                       
Query: 84  atgaacatcgccgatgcccccaccaacgtgcagctccctggcatgtacaacaaggaggag 143
           |||||||| || ||   ||| || || || |||||||| || |||||||||||| | |||
Sbjct: 68  atgaacattgctgacaacccgacaaatgtccagctccccggtatgtacaacaagcaagag 127

                                                                       
Query: 144 aacccccgtgtgcccatcgtcgtcaccggtaacgatttctcgacgctctacgctcctctg 203
           ||  || | || || ||  ||||||| |||||||||||||| ||  | || ||||| || 
Sbjct: 128 aatgccagggtccctattatcgtcactggtaacgatttctccacattgtatgctccactt 187

                                              
Query: 204 atccgtgatggtcgtatggagaagttctactgggc 238
           |||||||||||||||||||||||||||||||||||
Sbjct: 188 atccgtgatggtcgtatggagaagttctactgggc 222



 Score = 44.1 bits (22), Expect = 0.54
 Identities = 43/50 (86%)
 Strand = Plus / Plus

                                                             
Query: 312 gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgc 361
           |||||||| || || | |||||| |||||||| || ||||||||||||||
Sbjct: 296 gtcaagattgttgataacttccctggacaatctatcgactttttcggtgc 345

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score =  111 bits (56), Expect = 3e-21
 Identities = 86/96 (89%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            ||||||||| ||||| ||||| ||  | |||||||  ||||| ||||||||||| |||||
Sbjct: 1862 caacgatctggacgccggtgccggccgcatgggcgacaccacccagtacaccgtgaacaa 1921

                                                
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccga 97
            ||||||||||||||||||||||||||||||||||||
Sbjct: 1922 ccagatggtgaacgccaccctgatgaacatcgccga 1957



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 54/62 (87%)
 Strand = Plus / Plus

                                                                        
Query: 324  gacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtacgac 383
            ||||||||||| || || ||||||||||| ||||| || |||||||| || |||||||||
Sbjct: 2662 gacaccttccccggccagtccattgacttcttcggcgccctgcgtgcccgcgtgtacgac 2721

              
Query: 384  ga 385
            ||
Sbjct: 2722 ga 2723

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score =  105 bits (53), Expect = 2e-19
 Identities = 191/237 (80%)
 Strand = Plus / Plus

                                                                       
Query: 2   caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
           |||||||||||| || || || ||||| ||||| ||||| || || ||||| ||||||||
Sbjct: 763 caacgatcttgatgcaggagccggtagaatgggtggaactacacaatacactgtcaacaa 822

                                                                       
Query: 62  ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
           ||| |||||||| || || || |||||||| || |||  ||| || || || || |||||
Sbjct: 823 ccaaatggtgaatgctacactcatgaacattgctgataacccgacgaatgtccaactccc 882

                                                                       
Query: 122 tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
            || |||||||||||| | |||||  || | || || ||  | ||||| |||||||||||
Sbjct: 883 cggtatgtacaacaagcaagagaatgccagggtacctattattgtcactggtaacgattt 942

                                                                    
Query: 182 ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggc 238
           ||| ||  | || || ||||| ||||||||||||||||||||||| |||||||||||
Sbjct: 943 ctccacattgtatgcacctcttatccgtgatggtcgtatggagaaattctactgggc 999



 Score = 60.0 bits (30), Expect = 9e-06
 Identities = 48/54 (88%)
 Strand = Plus / Plus

                                                                  
Query: 312  gtcaagatcgtcgacaccttcccaggacaatccattgactttttcggtgctctg 365
            |||||||||||||| | |||||| |||||||| ||||| || ||||||||||||
Sbjct: 1073 gtcaagatcgtcgatagcttccctggacaatctattgatttcttcggtgctctg 1126

---

>gb|CP000239.1| Synechococcus sp. JA-3-3Ab, complete genome
          Length = 2932766

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 67/74 (90%)
 Strand = Plus / Minus

                                                                          
Query: 45     cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 104
              |||||||||||||||| |||  |||||| ||||||||||||||||||||||||   ||||
Sbjct: 445720 cagtacaccgtcaacacccaactggtgagcgccaccctgatgaacatcgccgacaacccc 445661

                            
Query: 105    accaacgtgcagct 118
              ||||||||||||||
Sbjct: 445660 accaacgtgcagct 445647

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score = 91.7 bits (46), Expect = 3e-15
 Identities = 205/258 (79%)
 Strand = Plus / Plus

                                                                        
Query: 2    caacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaa 61
            |||||||||||| ||||| || || ||| | || || || || |||||||| || || ||
Sbjct: 761  caacgatcttgatgctggagctggaaggcttggtgggactacccagtacacagtgaataa 820

                                                                        
Query: 62   ccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccc 121
            ||||||||| || || || || |||||||| || ||   ||| ||||| |||||||| ||
Sbjct: 821  ccagatggtaaatgctactcttatgaacattgctgacaacccaaccaatgtgcagctacc 880

                                                                        
Query: 122  tggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgattt 181
             |||||||| |||||||| || || ||| | || |||||| | || || |||||||| ||
Sbjct: 881  aggcatgtataacaaggaagaaaatcccagagttcccatcatagtaactggtaacgactt 940

                                                                        
Query: 182  ctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcc 241
            ||| ||| | || || ||||| || ||||||||||| ||||| || ||||||||||||||
Sbjct: 941  ctcaacgttatatgcacctctcattcgtgatggtcggatggataaattctactgggctcc 1000

                              
Query: 242  cacccgtgacgaccgtat 259
             || ||||| || |||||
Sbjct: 1001 aactcgtgaagatcgtat 1018



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 68/82 (82%)
 Strand = Plus / Plus

                                                                        
Query: 321  gtcgacaccttcccaggacaatccattgactttttcggtgctctgcgtgctcgggtgtac 380
            |||||||||||||||||||| || || ||||| || |||||| || | ||||| || || 
Sbjct: 1080 gtcgacaccttcccaggacagtcaatagacttctttggtgctttgagagctcgagtttat 1139

                                  
Query: 381  gacgatgaggtgcgcaagtggg 402
            |||||||| ||| | |||||||
Sbjct: 1140 gacgatgaagtgagaaagtggg 1161

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 155/192 (80%)
 Strand = Plus / Plus

                                                                       
Query: 45  cagtacaccgtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgccccc 104
           |||||||| || |||||||||||||| || |||||||| |||||||| || |||  ||| 
Sbjct: 487 cagtacactgtgaacaaccagatggtcaatgccaccctcatgaacattgctgataaccca 546

                                                                       
Query: 105 accaacgtgcagctccctggcatgtacaacaaggaggagaacccccgtgtgcccatcgtc 164
           || || || ||| | ||||| |||||||||||||| || || || ||||| || || || 
Sbjct: 547 acgaatgttcagttgcctggaatgtacaacaaggaagaaaatcctcgtgttccaattgtt 606

                                                                       
Query: 165 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 224
           || || || || |||||||| ||  | || |||||  |||| |||||||| |||||||||
Sbjct: 607 gtgacaggaaatgatttctcaactttgtatgctccattgattcgtgatgggcgtatggag 666

                       
Query: 225 aagttctactgg 236
           ||||||||||||
Sbjct: 667 aagttctactgg 678

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 196/248 (79%)
 Strand = Plus / Minus

                                                                        
Query: 6    gatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaaccag 65
            |||||||| || || || ||||| ||||| || || || || ||||| ||||||||||||
Sbjct: 7139 gatcttgatgcaggagctggtagaatgggtggcactactcaatacacagtcaacaaccag 7080

                                                                        
Query: 66   atggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccctggc 125
            ||||| || || ||||| |||||||| || ||   ||| ||||| || || || || || 
Sbjct: 7079 atggtaaatgcaaccctcatgaacattgctgacaaccctaccaatgttcaacttcccggt 7020

                                                                        
Query: 126  atgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttctcg 185
            ||||||||||| || |||||  |||| || || ||| ||||||| || || || ||||| 
Sbjct: 7019 atgtacaacaaagaagagaatgcccgcgtccctatcatcgtcactggcaatgacttctct 6960

                                                                        
Query: 186  acgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggctcccacc 245
            ||| | || |||||| | || |||||||| |||||||| || ||||||||||| || || 
Sbjct: 6959 acgttgtatgctcctttaattcgtgatggacgtatggaaaaattctactgggcacctact 6900

                    
Query: 246  cgtgacga 253
            ||||||||
Sbjct: 6899 cgtgacga 6892

---

>emb|X60093.1|BPNIR1 B.pendula mRNA for nitrite reductase
          Length = 2472

 Score = 79.8 bits (40), Expect = 1e-11
 Identities = 97/116 (83%)
 Strand = Plus / Plus

                                                                       
Query: 495 aagctgctagagtacgggcacatgctcgtccaggagcaggacaatgtcaagcgtgtgcag 554
           |||||||||||||| ||  ||||||| |||||||||||||||||||| ||| | || || 
Sbjct: 3   aagctgctagagtatggaaacatgcttgtccaggagcaggacaatgtgaagagagttcaa 62

                                                                   
Query: 555 cttgctgacacctacatgagccaggcagctctgggtgatgctaaccaggatgcgat 610
           || || ||||| ||| ||||||| |||||||| || ||||| ||| ||||| ||||
Sbjct: 63  ctggcagacacgtacttgagccaagcagctcttggagatgcaaacgaggattcgat 118

---

>ref|NM_105969.1| Arabidopsis thaliana ATP binding / ATPase AT1G73110 mRNA, complete
           cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 165 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 224
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 225 aagttctactgg 236
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 184/236 (77%)
 Strand = Plus / Minus

                                                                          
Query: 3      aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 62
              ||||||||||| || || || ||| | ||||| ||||| || |||||||| || ||||| 
Sbjct: 104060 aacgatcttgatgcaggagccggtcgtatgggtggaacaacacagtacacagtgaacaat 104001

                                                                          
Query: 63     cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 122
              || ||||| || || || || |||||||| || |||  ||| || || || || || |||
Sbjct: 104000 caaatggtaaatgcaacacttatgaacattgctgataacccaacaaatgttcaacttcct 103941

                                                                          
Query: 123    ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 182
              || ||||| ||||| || |||||  | |||||||| ||| | || || ||||| ||||| 
Sbjct: 103940 ggtatgtataacaaagaagagaatgcacgtgtgcctatcattgttactggtaatgatttt 103881

                                                                      
Query: 183    tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggc 238
              || ||  | || |||||||| || ||||| |||||||||||||| ||||| |||||
Sbjct: 103880 tcaacattgtatgctcctcttattcgtgacggtcgtatggagaaattctattgggc 103825

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 184/236 (77%)
 Strand = Plus / Minus

                                                                         
Query: 3     aacgatcttgacgctggtgcgggtaggatgggcggaaccacgcagtacaccgtcaacaac 62
             ||||||||||| || || || ||| | ||||| ||||| || |||||||| || ||||| 
Sbjct: 83085 aacgatcttgatgcaggagccggtcgtatgggtggaacaacacagtacacagtgaacaat 83026

                                                                         
Query: 63    cagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtgcagctccct 122
             || ||||| || || || || |||||||| || |||  ||| || || || || || |||
Sbjct: 83025 caaatggtaaatgcaacacttatgaacattgctgataacccaacaaatgttcaacttcct 82966

                                                                         
Query: 123   ggcatgtacaacaaggaggagaacccccgtgtgcccatcgtcgtcaccggtaacgatttc 182
             || ||||| ||||| || |||||  | |||||||| ||| | || || ||||| ||||| 
Sbjct: 82965 ggtatgtataacaaagaagagaatgcacgtgtgcctatcattgttactggtaatgatttt 82906

                                                                     
Query: 183   tcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctactgggc 238
             || ||  | || |||||||| || ||||| |||||||||||||| ||||| |||||
Sbjct: 82905 tcaacattgtatgctcctcttattcgtgacggtcgtatggagaaattctattgggc 82850

---

>gb|AY078044.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1299

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 165 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 224
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 865 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 924

                       
Query: 225 aagttctactgg 236
           ||||||||||||
Sbjct: 925 aagttctactgg 936

---

>gb|AF361834.1| Arabidopsis thaliana At1g73110/F3N23_39 mRNA, complete cds
          Length = 1437

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 165 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 224
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 899 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 958

                       
Query: 225 aagttctactgg 236
           ||||||||||||
Sbjct: 959 aagttctactgg 970

---

>emb|BX815704.1|CNS0AARM Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS85ZG11 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1496

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 165 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 224
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 873 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 932

                       
Query: 225 aagttctactgg 236
           ||||||||||||
Sbjct: 933 aagttctactgg 944

---

>gb|AY845069.1| Olea europaea clone SRAP-12 SRAP marker genomic sequence
          Length = 262

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 76/92 (82%)
 Strand = Plus / Plus

                                                                       
Query: 54  gtcaacaaccagatggtgaacgccaccctgatgaacatcgccgatgcccccaccaacgtg 113
           ||||| |||||||||||||| || ||||| |||||||| || |||   || || || || 
Sbjct: 97  gtcaataaccagatggtgaatgcaacccttatgaacattgctgataatccaactaatgtt 156

                                           
Query: 114 cagctccctggcatgtacaacaaggaggagaa 145
           ||||||||||| |||||||||||  |||||||
Sbjct: 157 cagctccctggtatgtacaacaaacaggagaa 188

---

>dbj|AK118942.1| Arabidopsis thaliana At1g73110 mRNA for unknown protein, complete
           cds, clone: RAFL21-28-D21
          Length = 1447

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Plus

                                                                       
Query: 165 gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 224
           ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 886 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 945

                       
Query: 225 aagttctactgg 236
           ||||||||||||
Sbjct: 946 aagttctactgg 957

---

>gb|AC008017.2|AC008017 Arabidopsis thaliana chromosome I BAC F3N23 genomic sequence, complete
             sequence
          Length = 116944

 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 61/72 (84%)
 Strand = Plus / Minus

                                                                         
Query: 165   gtcaccggtaacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggag 224
             ||||| || ||||||||||| || || || ||||| ||||||||||| ||  | ||||||
Sbjct: 97686 gtcacagggaacgatttctctacactgtatgctccactgatccgtgaaggaagaatggag 97627

                         
Query: 225   aagttctactgg 236
             ||||||||||||
Sbjct: 97626 aagttctactgg 97615

---

>emb|BX813694.1|CNS0ADV2 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB33ZF10 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1426

 Score = 54.0 bits (27), Expect = 6e-04
 Identities = 54/63 (85%)
 Strand = Plus / Plus

                                                                       
Query: 174 aacgatttctcgacgctctacgctcctctgatccgtgatggtcgtatggagaagttctac 233
           ||||||||||| || || || ||||| ||||||||||| ||  | |||||||||||||||
Sbjct: 936 aacgatttctctacactgtatgctccactgatccgtgaaggaagaatggagaagttctac 995

              
Query: 234 tgg 236
           |||
Sbjct: 996 tgg 998

---

>gb|AC114810.4| Homo sapiens BAC clone RP11-1293J14 from 2, complete sequence
          Length = 119249

 Score = 44.1 bits (22), Expect = 0.54
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                   
Query: 573   agccaggcagctctgggtgatg 594
             ||||||||||||||||||||||
Sbjct: 51254 agccaggcagctctgggtgatg 51275

---

>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 314  caagatcgtcgacaccttccc 334
            |||||||||||||||||||||
Sbjct: 3673 caagatcgtcgacaccttccc 3653

---

>emb|BX818441.1|CNS0ACQX Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTSIL79ZC02 of Silique of strain col-0 of Arabidopsis
           thaliana (thale cress)
          Length = 593

 Score = 42.1 bits (21), Expect = 2.1
 Identities = 61/73 (83%), Gaps = 1/73 (1%)
 Strand = Plus / Plus

                                                                       
Query: 165 gtcaccggtaacgatttctcgacgctctacgctc-ctctgatccgtgatggtcgtatgga 223
           ||||| || ||||||||||| || || || |||| | ||||||||||| ||  | |||||
Sbjct: 136 gtcacagggaacgatttctctacactgtatgctctcactgatccgtgaaggaagaatgga 195

                        
Query: 224 gaagttctactgg 236
           |||||||||||||
Sbjct: 196 gaagttctactgg 208

---

>gb|AC002511.1| Homo sapiens chromosome 19 clone PC28130, complete sequence
          Length = 98713

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 261   ggtgtctgcaagggtatcttccag 284
             |||||||||||||||||| |||||
Sbjct: 67265 ggtgtctgcaagggtatcatccag 67288

---

>gb|U60105.1| Bos taurus large conductance calcium-activated potassium channel
            alpha subunit mRNA, partial cds
          Length = 3448

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  tgagccaggcagctctgggtgatg 594
            ||||||||||||||||||| ||||
Sbjct: 1565 tgagccaggcagctctgggcgatg 1542

---

>ref|XM_751239.1| Ustilago maydis 521 hypothetical protein (UM00185.1) partial mRNA
          Length = 531

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 544 agcgtgtgcagcttgctgac 563
           ||||||||||||||||||||
Sbjct: 223 agcgtgtgcagcttgctgac 242

---

>emb|Z73941.1|LJRAB7B L.japonicus mRNA for small GTP-binding protein, RAB7B
          Length = 1010

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 297 agtgacgagtctgtcgtcaa 316
           ||||||||||||||||||||
Sbjct: 308 agtgacgagtctgtcgtcaa 289

---

>gb|AF026000.2| Sus scrofa calcium-activated potassium channel alpha subunit mRNA,
            complete cds
          Length = 3459

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  tgagccaggcagctctgggtgatg 594
            ||||||||||||||||||| ||||
Sbjct: 1619 tgagccaggcagctctgggcgatg 1596

---

>gb|AC161351.3| Mus musculus chromosome 15, clone RP24-142I15, complete sequence
          Length = 161308

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 525    caggagcaggacaatgtcaa 544
              ||||||||||||||||||||
Sbjct: 126419 caggagcaggacaatgtcaa 126438

---

>ref|NM_174680.2| Bos taurus potassium large conductance calcium-activated channel,
            subfamily M, alpha member 1 (KCNMA1), mRNA
          Length = 6183

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  tgagccaggcagctctgggtgatg 594
            ||||||||||||||||||| ||||
Sbjct: 1935 tgagccaggcagctctgggcgatg 1912

---

>gb|AY033474.1| Bos taurus BK potassium ion channel isoform C mRNA, partial cds,
            alternatively spliced
          Length = 3430

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  tgagccaggcagctctgggtgatg 594
            ||||||||||||||||||| ||||
Sbjct: 1659 tgagccaggcagctctgggcgatg 1636

---

>gb|AY033473.1| Bos taurus BK potassium ion channel isoform B mRNA, complete cds,
            alternatively spliced
          Length = 4490

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  tgagccaggcagctctgggtgatg 594
            ||||||||||||||||||| ||||
Sbjct: 2026 tgagccaggcagctctgggcgatg 2003

---

>gb|AY033472.1| Bos taurus BK potassium ion channel isoform A mRNA, complete cds,
            alternatively spliced
          Length = 6183

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  tgagccaggcagctctgggtgatg 594
            ||||||||||||||||||| ||||
Sbjct: 1935 tgagccaggcagctctgggcgatg 1912

---

>gb|CP000250.1| Rhodopseudomonas palustris HaA2, complete genome
          Length = 5331656

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 246     cgtgacgaccgtatcggtgt 265
               ||||||||||||||||||||
Sbjct: 3056327 cgtgacgaccgtatcggtgt 3056308

---

>ref|NM_076469.4| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2739

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   tgatgaacatcgccgatgcc 101
            ||||||||||||||||||||
Sbjct: 1896 tgatgaacatcgccgatgcc 1877

---

>ref|NM_076470.2| Caenorhabditis elegans Amyloid Precursor-Like family member (apl-1)
            (apl-1) mRNA, complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   tgatgaacatcgccgatgcc 101
            ||||||||||||||||||||
Sbjct: 1897 tgatgaacatcgccgatgcc 1878

---

>gb|AC102845.9| Mus musculus chromosome 15, clone RP24-389O7, complete sequence
          Length = 125424

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 525    caggagcaggacaatgtcaa 544
              ||||||||||||||||||||
Sbjct: 106979 caggagcaggacaatgtcaa 106960

---

>gb|U56966.2| Caenorhabditis elegans cosmid C42D8, complete sequence
          Length = 42802

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 82    tgatgaacatcgccgatgcc 101
             ||||||||||||||||||||
Sbjct: 34318 tgatgaacatcgccgatgcc 34337

---

>ref|NM_214219.1| Sus scrofa calcium-activated potassium channel alpha subunit
            (KCNMA1), mRNA
          Length = 3459

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 571  tgagccaggcagctctgggtgatg 594
            ||||||||||||||||||| ||||
Sbjct: 1619 tgagccaggcagctctgggcgatg 1596

---

>gb|U00240.1|U00240 Caenorhabditis elegans beta-amyloid protein precursor (APL-1) mRNA
            complete cds
          Length = 2742

 Score = 40.1 bits (20), Expect = 8.4
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 82   tgatgaacatcgccgatgcc 101
            ||||||||||||||||||||
Sbjct: 1882 tgatgaacatcgccgatgcc 1863


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,370,353
Number of Sequences: 3902068
Number of extensions: 3370353
Number of successful extensions: 65508
Number of sequences better than 10.0: 121
Number of HSP's better than 10.0 without gapping: 121
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 65153
Number of HSP's gapped (non-prelim): 322
length of query: 617
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 594
effective length of database: 17,143,297,704
effective search space: 10183118836176
effective search space used: 10183118836176
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---