ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal32c01 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_476702.1| Oryza sativa (japonica cultivar-group), mRNA Length = 2391 Score = 579 bits (292), Expect = e-162 Identities = 480/543 (88%) Strand = Plus / Plus Query: 6 ttttnagcaatgaataaactaaagaagatggcccttagagtaattgccgagaatctgtct 65 |||| ||||||||| || |||||||||||||||||||| || ||||| || ||| | || Sbjct: 1346 ttttcagcaatgaacaagctaaagaagatggcccttagggtcattgctgaaaatttatcg 1405 Query: 66 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 125 |||||||||||||| || |||||||| |||||||||||| |||||||||| |||||||| Sbjct: 1406 gaagatgaaattgcgggattgagagaaatgttcaaaatgttggacactgataatagtggt 1465 Query: 126 caaatcacattggaggaactaaaaactggcttgcagagagttggtgccaacttaaaagag 185 || ||||||||||||||||||||||||||||||| |||||||||||| || || || || Sbjct: 1466 cagatcacattggaggaactaaaaactggcttgcggagagttggtgctaatttgaaggat 1525 Query: 186 tcagaaattgcaactctaatggaagcggcggatattgataacagtgggtcaattgattat 245 || |||||| |||| |||||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 1526 tcggaaattacaaccctaatggaagcggctgatattgataatagtggttcaatagattat 1585 Query: 246 ggggagttccttgcggcaacattgcatctgaacaaggttgagagagaagataatctgttt 305 ||||||||| |||| ||||| ||||||||||||| |||||||||||||||||||| ||| Sbjct: 1586 ggggagttcattgctgcaactatgcatctgaacaaagttgagagagaagataatcttttt 1645 Query: 306 gcagcattctcatacttcgataaagatggcagtggttacattactcaagatgaactgcaa 365 ||||| || |||||||| |||||||| ||||||||||||||||||||||||| || ||| Sbjct: 1646 gcagcgttttcatactttgataaagacagcagtggttacattactcaagatgagctacaa 1705 Query: 366 aaagcatgtgaagagtttggtataggagatgcacatcttgacgatattatccgagacatt 425 ||||| ||||| || ||||| ||||||||||||||||| || ||||| ||| ||| ||| Sbjct: 1706 aaagcctgtgaggaatttggcataggagatgcacatctggaggatatcatcaaagatatt 1765 Query: 426 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 485 ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || Sbjct: 1766 gatcaggacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaaggg 1825 Query: 486 aataatccactagggaaaaagggacaagggcagacgagctttggtcttagggaagcattg 545 ||||||||||||||||||||||| ||||| ||| || |||||||| |||||||||||| Sbjct: 1826 aataatccactagggaaaaaggggcaaggccagctaagttttggtctaagggaagcattg 1885 Query: 546 aag 548 ||| Sbjct: 1886 aag 1888
>dbj|AK068414.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013153A17, full insert sequence Length = 2391 Score = 563 bits (284), Expect = e-157 Identities = 478/543 (88%) Strand = Plus / Plus Query: 6 ttttnagcaatgaataaactaaagaagatggcccttagagtaattgccgagaatctgtct 65 |||| ||||||||| || |||||||||||||||||||| || ||||| || ||| | || Sbjct: 1346 ttttcagcaatgaacaagctaaagaagatggcccttagggtcattgctgaaaatttatcg 1405 Query: 66 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 125 |||||||||||||| | |||||||| |||||||||||| |||||||||| |||||||| Sbjct: 1406 gaagatgaaattgcgagattgagagaaatgttcaaaatgttggacactgataatagtggt 1465 Query: 126 caaatcacattggaggaactaaaaactggcttgcagagagttggtgccaacttaaaagag 185 || ||||||||||||||||||||||||||||||| |||||||||||| || || || || Sbjct: 1466 cagatcacattggaggaactaaaaactggcttgcggagagttggtgctaatttgaaggat 1525 Query: 186 tcagaaattgcaactctaatggaagcggcggatattgataacagtgggtcaattgattat 245 || |||||| |||| |||||||||||||| ||||||||||| ||||| ||||| |||||| Sbjct: 1526 tcggaaattacaaccctaatggaagcggctgatattgataatagtggttcaatagattat 1585 Query: 246 ggggagttccttgcggcaacattgcatctgaacaaggttgagagagaagataatctgttt 305 ||||||||| |||| ||||| ||||||||||||| |||||||||||||||||||| ||| Sbjct: 1586 ggggagttcattgctgcaactatgcatctgaacaaagttgagagagaagataatcttttt 1645 Query: 306 gcagcattctcatacttcgataaagatggcagtggttacattactcaagatgaactgcaa 365 ||||| || |||||||| |||||||| ||||||||||||||||||||||||| || ||| Sbjct: 1646 gcagcgttttcatactttgataaagacagcagtggttacattactcaagatgagctacaa 1705 Query: 366 aaagcatgtgaagagtttggtataggagatgcacatcttgacgatattatccgagacatt 425 ||||| ||||| || ||||| ||||||||||||||||| || ||||| ||| ||| ||| Sbjct: 1706 aaagcctgtgaggaatttggcataggagatgcacatctggaggatatcatcaaagatatt 1765 Query: 426 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 485 ||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| || Sbjct: 1766 gatcaggacaatgatggccggatcgactacaatgaatttgtaacaatgatgcggaaaggg 1825 Query: 486 aataatccactagggaaaaagggacaagggcagacgagctttggtcttagggaagcattg 545 ||||||||||||||||||||||| ||||| ||| || |||||||| |||||||||||| Sbjct: 1826 aataatccactagggaaaaaggggcaaggccagctaagttttggtctaagggaagcattg 1885 Query: 546 aag 548 ||| Sbjct: 1886 aag 1888
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 216 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 275 ||||||||||| ||||| ||||| ||||||||||||||| |||| ||||| |||||||| Sbjct: 3322566 gatattgataatagtggttcaatagattatggggagttcattgctgcaactatgcatctg 3322507 Query: 276 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 335 ||||| |||||||||||||||||||| |||||||| || |||||||| |||||||| || Sbjct: 3322506 aacaaagttgagagagaagataatctttttgcagcgttttcatactttgataaagacagc 3322447 Query: 336 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 395 ||||||||||||||||||||||| || |||||||| ||||| || ||||| ||||||||| Sbjct: 3322446 agtggttacattactcaagatgagctacaaaaagcctgtgaggaatttggcataggagat 3322387 Query: 396 gcacatcttgacgatattatccgagacattgatcaagacaatg 438 |||||||| || ||||| ||| ||| |||||||| ||||||| Sbjct: 3322386 gcacatctggaggatatcatcaaagatattgatcaggacaatg 3322344 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 66 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 125 |||||||||||||| || |||||||| |||||||||||| |||||||||| |||||||| Sbjct: 3323099 gaagatgaaattgcgggattgagagaaatgttcaaaatgttggacactgataatagtggt 3323040 Query: 126 caaatcacattggaggaactaaaaactggcttgcagagagttggtgccaacttaaaagag 185 || ||||||||||||||||||||||||||||||| |||||||||||| || || || || Sbjct: 3323039 cagatcacattggaggaactaaaaactggcttgcggagagttggtgctaatttgaaggat 3322980 Query: 186 tcagaaattgcaactctaatggaagcgg 213 || |||||| |||| ||||||||||||| Sbjct: 3322979 tcggaaattacaaccctaatggaagcgg 3322952 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 438 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataatccacta 497 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 3322251 gatggccggatcgactacaatgaatttgtaacaatgatgcagaaagggaataatccacta 3322192 Query: 498 gggaaaaagggacaagggcagacgagctttggtcttagggaagcattgaag 548 ||||||||||| ||||| ||| || |||||||| ||||||||||||||| Sbjct: 3322191 gggaaaaaggggcaaggccagctaagttttggtctaagggaagcattgaag 3322141 Score = 54.0 bits (27), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 6 ttttnagcaatgaataaactaaagaagatggcccttag 43 |||| ||||||||| || |||||||||||||||||||| Sbjct: 3323245 ttttcagcaatgaacaagctaaagaagatggcccttag 3323208 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 tggacactgacaatagtggcca 127 |||||||||||||||||||||| Sbjct: 19651444 tggacactgacaatagtggcca 19651465 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 tggacactgacaatagtggcca 127 |||||||||||||||||||||| Sbjct: 19592263 tggacactgacaatagtggcca 19592242 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 tggacactgacaatagtggcc 126 ||||||||||||||||||||| Sbjct: 19705836 tggacactgacaatagtggcc 19705856
>dbj|AP003847.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1714_H10 Length = 191580 Score = 228 bits (115), Expect = 2e-56 Identities = 196/223 (87%) Strand = Plus / Minus Query: 216 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 275 ||||||||||| ||||| ||||| ||||||||||||||| |||| ||||| |||||||| Sbjct: 132259 gatattgataatagtggttcaatagattatggggagttcattgctgcaactatgcatctg 132200 Query: 276 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 335 ||||| |||||||||||||||||||| |||||||| || |||||||| |||||||| || Sbjct: 132199 aacaaagttgagagagaagataatctttttgcagcgttttcatactttgataaagacagc 132140 Query: 336 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 395 ||||||||||||||||||||||| || |||||||| ||||| || ||||| ||||||||| Sbjct: 132139 agtggttacattactcaagatgagctacaaaaagcctgtgaggaatttggcataggagat 132080 Query: 396 gcacatcttgacgatattatccgagacattgatcaagacaatg 438 |||||||| || ||||| ||| ||| |||||||| ||||||| Sbjct: 132079 gcacatctggaggatatcatcaaagatattgatcaggacaatg 132037 Score = 167 bits (84), Expect = 5e-38 Identities = 132/148 (89%) Strand = Plus / Minus Query: 66 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 125 |||||||||||||| || |||||||| |||||||||||| |||||||||| |||||||| Sbjct: 132792 gaagatgaaattgcgggattgagagaaatgttcaaaatgttggacactgataatagtggt 132733 Query: 126 caaatcacattggaggaactaaaaactggcttgcagagagttggtgccaacttaaaagag 185 || ||||||||||||||||||||||||||||||| |||||||||||| || || || || Sbjct: 132732 cagatcacattggaggaactaaaaactggcttgcggagagttggtgctaatttgaaggat 132673 Query: 186 tcagaaattgcaactctaatggaagcgg 213 || |||||| |||| ||||||||||||| Sbjct: 132672 tcggaaattacaaccctaatggaagcgg 132645 Score = 149 bits (75), Expect = 1e-32 Identities = 102/111 (91%) Strand = Plus / Minus Query: 438 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataatccacta 497 |||||||||||||||||||||||||||||||||||||||||||| || |||||||||||| Sbjct: 131944 gatggccggatcgactacaatgaatttgtaacaatgatgcagaaagggaataatccacta 131885 Query: 498 gggaaaaagggacaagggcagacgagctttggtcttagggaagcattgaag 548 ||||||||||| ||||| ||| || |||||||| ||||||||||||||| Sbjct: 131884 gggaaaaaggggcaaggccagctaagttttggtctaagggaagcattgaag 131834 Score = 54.0 bits (27), Expect = 6e-04 Identities = 35/38 (92%) Strand = Plus / Minus Query: 6 ttttnagcaatgaataaactaaagaagatggcccttag 43 |||| ||||||||| || |||||||||||||||||||| Sbjct: 132938 ttttcagcaatgaacaagctaaagaagatggcccttag 132901
>gb|AC084296.12| Oryza sativa chromosome 3 BAC OSJNBb0024J04 genomic sequence, complete sequence Length = 145507 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Minus Query: 216 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 275 |||||||| ||||| || ||||||||||||| || ||| |||| ||||| |||||| | Sbjct: 140270 gatattgacaacagcggaacaattgattatggagaattcattgctgcaactttgcatata 140211 Query: 276 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 335 ||||| || |||| || ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 140210 aacaaagtagagaaggaggataagctgtttgcagctttctcatactttgataaagatggc 140151 Query: 336 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 395 || |||||||||||||||||||| || ||||| |||||||| || || |||||||| ||| Sbjct: 140150 agcggttacattactcaagatgagcttcaaaaggcatgtgaggaattcggtataggtgat 140091 Query: 396 gcacatcttgacgatattatccgagacattgatcaagacaatg 438 | | | |||| |||||||| ||||||||||||| ||||||| Sbjct: 140090 acccgtattgaggatattattggagacattgatcaggacaatg 140048 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 66 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 125 ||||| ||||||||||| || | |||||||||||||||||| ||||||||||| || || Sbjct: 140845 gaagaagaaattgcaggattaaaagagatgttcaaaatgctagacactgacaacagcggt 140786 Query: 126 caaatcacattggaggaactaaaaactggcttgcagagagttggtgc 172 || || ||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 140785 catattacactggaagaactaaaaacaggcttgcagagagttggtgc 140739 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 438 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataat 491 ||||| ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 139971 gatggacggatcgactacaatgagtttgtcgaaatgatgcagaagggaaataat 139918 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 12 gcaatgaataaactaaagaagatggcccttag 43 |||||||| ||||||||||| ||||| ||||| Sbjct: 140981 gcaatgaacaaactaaagaaaatggcgcttag 140950
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Minus Query: 216 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 275 |||||||| ||||| || ||||||||||||| || ||| |||| ||||| |||||| | Sbjct: 32488142 gatattgacaacagcggaacaattgattatggagaattcattgctgcaactttgcatata 32488083 Query: 276 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 335 ||||| || |||| || ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 32488082 aacaaagtagagaaggaggataagctgtttgcagctttctcatactttgataaagatggc 32488023 Query: 336 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 395 || |||||||||||||||||||| || ||||| |||||||| || || |||||||| ||| Sbjct: 32488022 agcggttacattactcaagatgagcttcaaaaggcatgtgaggaattcggtataggtgat 32487963 Query: 396 gcacatcttgacgatattatccgagacattgatcaagacaatg 438 | | | |||| |||||||| ||||||||||||| ||||||| Sbjct: 32487962 acccgtattgaggatattattggagacattgatcaggacaatg 32487920 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 66 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 125 ||||| ||||||||||| || | |||||||||||||||||| ||||||||||| || || Sbjct: 32488717 gaagaagaaattgcaggattaaaagagatgttcaaaatgctagacactgacaacagcggt 32488658 Query: 126 caaatcacattggaggaactaaaaactggcttgcagagagttggtgc 172 || || ||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 32488657 catattacactggaagaactaaaaacaggcttgcagagagttggtgc 32488611 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 438 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataat 491 ||||| ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 32487843 gatggacggatcgactacaatgagtttgtcgaaatgatgcagaagggaaataat 32487790 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 12 gcaatgaataaactaaagaagatggcccttag 43 |||||||| ||||||||||| ||||| ||||| Sbjct: 32488853 gcaatgaacaaactaaagaaaatggcgcttag 32488822
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Minus Query: 216 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 275 |||||||| ||||| || ||||||||||||| || ||| |||| ||||| |||||| | Sbjct: 32578652 gatattgacaacagcggaacaattgattatggagaattcattgctgcaactttgcatata 32578593 Query: 276 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 335 ||||| || |||| || ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 32578592 aacaaagtagagaaggaggataagctgtttgcagctttctcatactttgataaagatggc 32578533 Query: 336 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 395 || |||||||||||||||||||| || ||||| |||||||| || || |||||||| ||| Sbjct: 32578532 agcggttacattactcaagatgagcttcaaaaggcatgtgaggaattcggtataggtgat 32578473 Query: 396 gcacatcttgacgatattatccgagacattgatcaagacaatg 438 | | | |||| |||||||| ||||||||||||| ||||||| Sbjct: 32578472 acccgtattgaggatattattggagacattgatcaggacaatg 32578430 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 66 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 125 ||||| ||||||||||| || | |||||||||||||||||| ||||||||||| || || Sbjct: 32579227 gaagaagaaattgcaggattaaaagagatgttcaaaatgctagacactgacaacagcggt 32579168 Query: 126 caaatcacattggaggaactaaaaactggcttgcagagagttggtgc 172 || || ||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 32579167 catattacactggaagaactaaaaacaggcttgcagagagttggtgc 32579121 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 438 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataat 491 ||||| ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 32578353 gatggacggatcgactacaatgagtttgtcgaaatgatgcagaagggaaataat 32578300 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 12 gcaatgaataaactaaagaagatggcccttag 43 |||||||| ||||||||||| ||||| ||||| Sbjct: 32579363 gcaatgaacaaactaaagaaaatggcgcttag 32579332
>gb|AC087096.11| Oryza sativa chromosome 3 BAC OSJNBa0087O09 genomic sequence, complete sequence Length = 119134 Score = 165 bits (83), Expect = 2e-37 Identities = 188/223 (84%) Strand = Plus / Minus Query: 216 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 275 |||||||| ||||| || ||||||||||||| || ||| |||| ||||| |||||| | Sbjct: 21591 gatattgacaacagcggaacaattgattatggagaattcattgctgcaactttgcatata 21532 Query: 276 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 335 ||||| || |||| || ||||| ||||||||||| ||||||||||| |||||||||||| Sbjct: 21531 aacaaagtagagaaggaggataagctgtttgcagctttctcatactttgataaagatggc 21472 Query: 336 agtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagat 395 || |||||||||||||||||||| || ||||| |||||||| || || |||||||| ||| Sbjct: 21471 agcggttacattactcaagatgagcttcaaaaggcatgtgaggaattcggtataggtgat 21412 Query: 396 gcacatcttgacgatattatccgagacattgatcaagacaatg 438 | | | |||| |||||||| ||||||||||||| ||||||| Sbjct: 21411 acccgtattgaggatattattggagacattgatcaggacaatg 21369 Score = 109 bits (55), Expect = 1e-20 Identities = 94/107 (87%) Strand = Plus / Minus Query: 66 gaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagtggc 125 ||||| ||||||||||| || | |||||||||||||||||| ||||||||||| || || Sbjct: 22166 gaagaagaaattgcaggattaaaagagatgttcaaaatgctagacactgacaacagcggt 22107 Query: 126 caaatcacattggaggaactaaaaactggcttgcagagagttggtgc 172 || || ||| |||| ||||||||||| |||||||||||||||||||| Sbjct: 22106 catattacactggaagaactaaaaacaggcttgcagagagttggtgc 22060 Score = 67.9 bits (34), Expect = 4e-08 Identities = 49/54 (90%) Strand = Plus / Minus Query: 438 gatggccggatcgactacaatgaatttgtaacaatgatgcagaagggaaataat 491 ||||| ||||||||||||||||| ||||| |||||||||||||||||||||| Sbjct: 21292 gatggacggatcgactacaatgagtttgtcgaaatgatgcagaagggaaataat 21239 Score = 40.1 bits (20), Expect = 8.5 Identities = 29/32 (90%) Strand = Plus / Minus Query: 12 gcaatgaataaactaaagaagatggcccttag 43 |||||||| ||||||||||| ||||| ||||| Sbjct: 22302 gcaatgaacaaactaaagaaaatggcgcttag 22271
>emb|AJ344154.1|NTA344154 Nicotiana tabacum mRNA for calcium-dependent protein kinase 2 (cdpk2 gene) Length = 2019 Score = 111 bits (56), Expect = 3e-21 Identities = 215/268 (80%) Strand = Plus / Plus Query: 220 ttgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctgaaca 279 |||||||||| || |||||||||||||||| || | || |||||||| ||| | |||| Sbjct: 1492 ttgataacagcggcacaattgattatggggaatttatagctgcaacattacattttaaca 1551 Query: 280 aggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggcagtg 339 | |||| ||||||||| |||| ||||| || ||||| ||||| |||||||||||||||| Sbjct: 1552 aaattgaaagagaagatcatctatttgctgctttctcttactttgataaagatggcagtg 1611 Query: 340 gttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtataggagatgcac 399 | |||||||| ||| || || ||| |||| ||||| || |||||||| || |||| | Sbjct: 1612 gctacattaccgcagacgagcttcaacaagcttgtgaggaatttggtattggggatgtcc 1671 Query: 400 atcttgacgatattatccgagacattgatcaagacaatgatggccggatcgactacaatg 459 |||| || ||||| || ||||| |||||| ||||||||||| || || || ||||||| Sbjct: 1672 atctagaagatatgataagagacgctgatcaggacaatgatggacgaattgattacaatg 1731 Query: 460 aatttgtaacaatgatgcagaagggaaa 487 | || || | |||||||| |||||||| Sbjct: 1732 agttcgttgctatgatgcaaaagggaaa 1759
>emb|AJ344156.1|NBE344156 Nicotiana benthamiana mRNA for calcium-dependent protein kinase 2 (cdpk2 gene) Length = 1746 Score = 85.7 bits (43), Expect = 2e-13 Identities = 109/131 (83%) Strand = Plus / Plus Query: 220 ttgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctgaaca 279 |||||||||| || |||||||||||||||| || | || |||||||| ||| | |||| Sbjct: 1403 ttgataacagcggcacaattgattatggggaatttatagctgcaacattacattttaaca 1462 Query: 280 aggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggcagtg 339 | |||| ||||||||| |||| ||||| || ||||| ||||| ||||||||| |||||| Sbjct: 1463 aaattgaaagagaagatcatctatttgctgctttctcttactttgataaagattgcagtg 1522 Query: 340 gttacattact 350 | ||||||||| Sbjct: 1523 gctacattact 1533 Score = 40.1 bits (20), Expect = 8.5 Identities = 56/68 (82%) Strand = Plus / Plus Query: 63 tctgaagatgaaattgcagggttgagagagatgttcaaaatgctggacactgacaatagt 122 |||||||| |||||||| || ||| ||| ||||||| ||| | || |||||||||||| Sbjct: 1246 tctgaagaagaaattgctggtctgaaagaaatgttcaggatgatagatactgacaatagt 1305 Query: 123 ggccaaat 130 || ||||| Sbjct: 1306 ggtcaaat 1313
>emb|AJ344155.1|NTA344155 Nicotiana tabacum mRNA for calcium-dependent protein kinase 3 (cdpk3 gene) Length = 2437 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 220 ttgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctgaaca 279 ||||||||||||| ||||||||||||| || || | || |||||||| ||| |||||| Sbjct: 1767 ttgataacagtggaacaattgattatggtgaatttatagctgcaacattacatatgaaca 1826 Query: 280 aggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggcagtg 339 | |||| ||| ||||| |||| ||||| || |||| ||||||||||||||||| |||| Sbjct: 1827 aaattgaaagacaagatcatctttttgctgctttctgttacttcgataaagatggaagtg 1886 Query: 340 gttacattactcaagatgaactgcaaaaagcatgtgaagagtttgg 385 | ||||| ||| ||||| || ||| |||| |||||||| ||||| Sbjct: 1887 gctacatcactgcggatgagcttcaacaagcttgtgaagaatttgg 1932
>dbj|AB051808.1| Solanum tuberosum RiCDPK1 mRNA for calcium dependent protein kinase, complete cds Length = 2393 Score = 83.8 bits (42), Expect = 6e-13 Identities = 135/166 (81%) Strand = Plus / Plus Query: 220 ttgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctgaaca 279 ||||||||||||| ||||||||||||| || || | || |||||||| ||| |||||| Sbjct: 1878 ttgataacagtggaacaattgattatggtgaatttatagctgcaacattacatatgaaca 1937 Query: 280 aggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggcagtg 339 | |||| ||| ||||| |||| ||||| || |||| ||||||||||||||||| |||| Sbjct: 1938 aaattgaaagacaagatcatctttttgctgctttctgttacttcgataaagatggaagtg 1997 Query: 340 gttacattactcaagatgaactgcaaaaagcatgtgaagagtttgg 385 | ||||| ||| ||||| || ||| |||| |||||||| ||||| Sbjct: 1998 gctacatcactgcggatgagcttcaacaagcttgtgaagaatttgg 2043
>gb|AY753553.1| Vicia faba calcium-dependent protein kinase 2 (CPK2) mRNA, partial cds Length = 1299 Score = 65.9 bits (33), Expect = 1e-07 Identities = 111/137 (81%) Strand = Plus / Plus Query: 222 gataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctgaacaag 281 ||||| ||||| ||||||||||| | || ||| | || |||||||||||| ||||||| Sbjct: 808 gataatagtggcacaattgattatagagaattcatagctgcaacattgcatttgaacaaa 867 Query: 282 gttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggcagtggt 341 |||| || ||||||||| | || |||| || ||||| || |||||||| || ||||| Sbjct: 868 gttggtagggaagataatttagttacagctttttcatattttgataaagacggaagtggc 927 Query: 342 tacattactcaagatga 358 ||||| ||||||||||| Sbjct: 928 tacatcactcaagatga 944
>dbj|AK059003.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-020-H02, full insert sequence Length = 572 Score = 63.9 bits (32), Expect = 6e-07 Identities = 53/60 (88%) Strand = Plus / Plus Query: 489 aatccactagggaaaaagggacaagggcagacgagctttggtcttagggaagcattgaag 548 |||||||||||||||||||| ||||| ||| || |||||||| ||||||||||||||| Sbjct: 8 aatccactagggaaaaaggggcaaggccagctaagttttggtctaagggaagcattgaag 67
>gb|DQ071551.1| Brassica napus putative calcium dependent kinase 6 mRNA, partial cds Length = 1608 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 424 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 483 ||||||||||||||||||| ||||| ||||| |||||||| |||||||||| |||| Sbjct: 1503 ttgatcaagacaatgatggacggattgactatggagaatttgttgcaatgatgcaaaagg 1562 Query: 484 gaaat 488 ||||| Sbjct: 1563 gaaat 1567 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||| ||||||||||||| Sbjct: 1091 gcaatgaataaattaaagaagatggc 1116
>gb|DQ071550.1| Brassica rapa subsp. pekinensis putative calcium dependent kinase 6 mRNA, partial cds Length = 1614 Score = 58.0 bits (29), Expect = 4e-05 Identities = 56/65 (86%) Strand = Plus / Plus Query: 424 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 483 ||||||||||||||||||| ||||| ||||| |||||||| |||||||||| |||| Sbjct: 1509 ttgatcaagacaatgatggacggattgactatggagaatttgttgcaatgatgcaaaagg 1568 Query: 484 gaaat 488 ||||| Sbjct: 1569 gaaat 1573 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||| ||||||||||||| Sbjct: 1097 gcaatgaataaattaaagaagatggc 1122 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 318 tacttcgataaagatggcagtggttacat 346 ||||| ||||||||||| ||||||||||| Sbjct: 1403 tactttgataaagatggaagtggttacat 1431
>gb|AY247754.1| Glycine max seed calcium dependent protein kinase a mRNA, complete cds Length = 1524 Score = 58.0 bits (29), Expect = 4e-05 Identities = 49/56 (87%) Strand = Plus / Plus Query: 204 atggaagcggcggatattgataacagtgggtcaattgattatggggagttccttgc 259 ||||| || |||||||||||||| |||||| ||||||||||||| || ||| |||| Sbjct: 1135 atggatgctgcggatattgataaaagtgggacaattgattatggngaattcattgc 1190
>gb|AY030280.1| Psophocarpus tetragonolobus calcium-dependent protein kinase mRNA, partial cds Length = 1041 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 204 atggaagcggcggatattgataacagtgggtcaattgattatgg 247 ||||| || |||||||||||||| |||||| ||||||||||||| Sbjct: 790 atggatgctgcggatattgataaaagtgggacaattgattatgg 833
>gb|M64987.1|SOYCADPK Glycine max calcium dependent protein kinase mRNA Length = 1768 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 204 atggaagcggcggatattgataacagtgggtcaattgattatgg 247 ||||| || |||||||||||||| |||||| ||||||||||||| Sbjct: 1269 atggatgctgcggatattgataaaagtgggacaattgattatgg 1312
>ref|NM_119697.2| Arabidopsis thaliana CPK5 (CALMODULIN-DOMAIN PROTEIN KINASE 5); ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase> AT4G35310 (CPK5) mRNA, complete cds Length = 2176 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||||||||||||||||| Sbjct: 1273 gcaatgaataaactaaagaagatggc 1298
>ref|NM_129449.1| Arabidopsis thaliana CPK20; ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein se> AT2G38910 (CPK20) mRNA, complete cds Length = 1752 Score = 52.0 bits (26), Expect = 0.002 Identities = 113/142 (79%) Strand = Plus / Plus Query: 202 taatggaagcggcggatattgataacagtgggtcaattgattatggggagttccttgcgg 261 ||||| |||| |||||||| |||||||||||| |||| || ||||| ||||| | || | Sbjct: 1436 taatgcaagcagcggatatagataacagtgggacaatagactatggagagtttatagcag 1495 Query: 262 caacattgcatctgaacaaggttgagagagaagataatctgtttgcagcattctcatact 321 ||| ||||| ||||||| | |||| |||||| || |||| |||||||||| |||| Sbjct: 1496 caatggtgcatttgaacaaaatagagaaagaagaccatttgttcacagcattctcttact 1555 Query: 322 tcgataaagatggcagtggtta 343 | || ||||||| |||||||| Sbjct: 1556 ttgaccaagatggaagtggtta 1577
>ref|NM_111902.1| Arabidopsis thaliana CPK2 (CALMODULIN-DOMAIN PROTEIN KINASE CDPK ISOFORM 2); calcium- and calmodulin-dependent protein kinase/ kinase AT3G10660 (CPK2) mRNA, complete cds Length = 2142 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 424 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaa 481 ||||||||||||| ||||| || || |||||||| || ||||| ||||||||||||| Sbjct: 1814 ttgatcaagacaaggatggacgaatagactacaacgagtttgtggcaatgatgcagaa 1871
>emb|AJ007366.1|ZMA7366 Zea mays mRNA for calcium-dependent protein kinase Length = 2566 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 15 atgaataaactaaagaagatggcccttagagtaattgccgagaatctgtctgaagatgaa 74 |||||||| || ||||||||||| ||||| || || |||||||| ||||| || || || Sbjct: 1618 atgaataagctgaagaagatggctcttagggtgatcgccgagaacctgtcggaggacgag 1677 Query: 75 attgcagggttgagagagatgttcaa 100 || || ||| |||| ||||||||||| Sbjct: 1678 atcgccgggctgagggagatgttcaa 1703
>gb|DQ071549.1| Brassica oleracea var. alboglabra calcium dependent kinase 5 mRNA, partial cds Length = 1608 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||||||||||||||||| Sbjct: 1091 gcaatgaataaactaaagaagatggc 1116
>emb|AL161587.2|ATCHRIV83 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 83 Length = 197859 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||||||||||||||||| Sbjct: 68430 gcaatgaataaactaaagaagatggc 68455
>emb|AL022604.1|ATF23E12 Arabidopsis thaliana DNA chromosome 4, BAC clone F23E12 (ESSA project) Length = 86710 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Minus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||||||||||||||||| Sbjct: 34921 gcaatgaataaactaaagaagatggc 34896
>gb|AY072802.1| Cucurbita maxima calmodulin-like-domain protein kinase CPK2 mRNA, complete cds Length = 2214 Score = 52.0 bits (26), Expect = 0.002 Identities = 44/50 (88%) Strand = Plus / Plus Query: 204 atggaagcggcggatattgataacagtgggtcaattgattatggggagtt 253 ||||||||||| |||||||| || |||||| | || |||||||||||||| Sbjct: 1470 atggaagcggctgatattgacaatagtgggactatagattatggggagtt 1519
>gb|U31834.1|ATU31834 Arabidopsis thaliana calmodulin-domain protein kinase CDPK isoform 5 (CPK5) mRNA, complete cds Length = 1967 Score = 52.0 bits (26), Expect = 0.002 Identities = 26/26 (100%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||||||||||||||||| Sbjct: 1235 gcaatgaataaactaaagaagatggc 1260
>gb|U31833.1|ATU31833 Arabidopsis thaliana calmodulin-domain protein kinase CDPK isoform 2 (CPK2) mRNA, complete cds Length = 2142 Score = 52.0 bits (26), Expect = 0.002 Identities = 50/58 (86%) Strand = Plus / Plus Query: 424 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaa 481 ||||||||||||| ||||| || || |||||||| || ||||| ||||||||||||| Sbjct: 1814 ttgatcaagacaaggatggacgaatagactacaacgagtttgtggcaatgatgcagaa 1871
>gb|AY109374.1| Zea mays CL146_1 mRNA sequence Length = 2566 Score = 52.0 bits (26), Expect = 0.002 Identities = 71/86 (82%) Strand = Plus / Plus Query: 15 atgaataaactaaagaagatggcccttagagtaattgccgagaatctgtctgaagatgaa 74 |||||||| || ||||||||||| ||||| || || |||||||| ||||| || || || Sbjct: 1618 atgaataagctgaagaagatggctcttagggtgatcgccgagaacctgtcggaggacgag 1677 Query: 75 attgcagggttgagagagatgttcaa 100 || || ||| |||| ||||||||||| Sbjct: 1678 atcgccgggctgagggagatgttcaa 1703
>ref|NM_117025.4| Arabidopsis thaliana CPK4; ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein ser> AT4G09570 (CPK4) mRNA, complete cds Length = 1696 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 199 ctctaatggaagcggcggatattgataacagtgggtcaattgattatggggagttccttg 258 |||| ||||| ||||||||||| || ||||||||| |||| || || || || ||||| | Sbjct: 1145 ctcttatggatgcggcggatatagacaacagtgggacaatagactacggtgaattcctag 1204 Query: 259 cggcaacattgcatctgaacaaggttgagagagaaga 295 | || ||||| ||| | |||||| | ||||||||||| Sbjct: 1205 cagcgacattacatataaacaagatggagagagaaga 1241
>gb|U31752.1|ATU31752 Arabidopsis thaliana calmodulin-domain protein kinase CDPK isoform 4 (CPK4) mRNA, partial cds Length = 1657 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 199 ctctaatggaagcggcggatattgataacagtgggtcaattgattatggggagttccttg 258 |||| ||||| ||||||||||| || ||||||||| |||| || || || || ||||| | Sbjct: 1106 ctcttatggatgcggcggatatagacaacagtgggacaatagactacggtgaattcctag 1165 Query: 259 cggcaacattgcatctgaacaaggttgagagagaaga 295 | || ||||| ||| | |||||| | ||||||||||| Sbjct: 1166 cagcgacattacatataaacaagatggagagagaaga 1202
>emb|BX827366.1|CNS0A2CH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS45ZB10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1676 Score = 50.1 bits (25), Expect = 0.009 Identities = 79/97 (81%) Strand = Plus / Plus Query: 199 ctctaatggaagcggcggatattgataacagtgggtcaattgattatggggagttccttg 258 |||| ||||| ||||||||||| || ||||||||| |||| || || || || ||||| | Sbjct: 1149 ctcttatggatgcggcggatatagacaacagtgggacaatagactacggtgaattcctag 1208 Query: 259 cggcaacattgcatctgaacaaggttgagagagaaga 295 | || ||||| ||| | |||||| | ||||||||||| Sbjct: 1209 cagcgacattacatataaacaagatggagagagaaga 1245
>gb|AC005770.3| Arabidopsis thaliana chromosome 2 clone T7F6 map CIC10A06, complete sequence Length = 96827 Score = 48.1 bits (24), Expect = 0.035 Identities = 105/132 (79%) Strand = Plus / Minus Query: 212 ggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgca 271 ||||||||| |||||||||||| |||| || ||||| ||||| | || |||| |||| Sbjct: 17723 ggcggatatagataacagtgggacaatagactatggagagtttatagcagcaatggtgca 17664 Query: 272 tctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaaga 331 | ||||||| | |||| |||||| || |||| |||||||||| ||||| || |||| Sbjct: 17663 tttgaacaaaatagagaaagaagaccatttgttcacagcattctcttactttgaccaaga 17604 Query: 332 tggcagtggtta 343 ||| |||||||| Sbjct: 17603 tggaagtggtta 17592
>ref|NM_127284.2| Arabidopsis thaliana CPK6 (CALCIUM-DEPENDENT PROTEIN KINASE 6); ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase> AT2G17290 (CPK6) mRNA, complete cds Length = 2332 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 426 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 485 ||||||||||| ||||| ||||| || ||| | |||||||| | |||||||| |||||| Sbjct: 1816 gatcaagacaacgatggacggattgattacgaagaatttgttgcgatgatgcaaaaggga 1875 Query: 486 aat 488 ||| Sbjct: 1876 aat 1878 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||| ||||||||||||| Sbjct: 1402 gcaatgaataaattaaagaagatggc 1427
>ref|NM_120569.2| Arabidopsis thaliana CPK1; calcium- and calmodulin-dependent protein kinase/ kinase AT5G04870 (CPK1) mRNA, complete cds Length = 2526 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 424 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 483 |||||||||||||||| || || || |||||||| || ||||| | ||||||||||| | Sbjct: 2167 ttgatcaagacaatgacgggcgaatagactacaacgagtttgtggcgatgatgcagaaag 2226 Query: 484 gaa 486 ||| Sbjct: 2227 gaa 2229
>gb|AY753552.1| Vicia faba calcium-dependent protein kinase 1 (CPK1) mRNA, complete cds Length = 1783 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 276 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 335 |||||| | |||||||| || ||||| || | |||||||| ||||| || |||||||| Sbjct: 1316 aacaagctggagagagaggaaaatctcttgtctgcattctcctactttgacaaagatgga 1375 Query: 336 agtggttacat 346 ||||||||||| Sbjct: 1376 agtggttacat 1386
>gb|AY140007.1| Arabidopsis thaliana putative calmodulin-domain protein kinase CPK6 (At2g17290) mRNA, complete cds Length = 2197 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 426 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 485 ||||||||||| ||||| ||||| || ||| | |||||||| | |||||||| |||||| Sbjct: 1776 gatcaagacaacgatggacggattgattacgaagaatttgttgcgatgatgcaaaaggga 1835 Query: 486 aat 488 ||| Sbjct: 1836 aat 1838 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||| ||||||||||||| Sbjct: 1362 gcaatgaataaattaaagaagatggc 1387
>gb|U31835.1|ATU31835 Arabidopsis thaliana calmodulin-domain protein kinase CDPK isoform 6 (CPK6) mRNA, complete cds Length = 2036 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 426 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 485 ||||||||||| ||||| ||||| || ||| | |||||||| | |||||||| |||||| Sbjct: 1575 gatcaagacaacgatggacggattgattacgaagaatttgttgcgatgatgcaaaaggga 1634 Query: 486 aat 488 ||| Sbjct: 1635 aat 1637 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||| ||||||||||||| Sbjct: 1161 gcaatgaataaattaaagaagatggc 1186
>gb|AY247755.1| Glycine max seed calcium dependent protein kinase b mRNA, complete cds Length = 1473 Score = 46.1 bits (23), Expect = 0.14 Identities = 113/143 (79%) Strand = Plus / Plus Query: 204 atggaagcggcggatattgataacagtgggtcaattgattatggggagttccttgcggca 263 ||||||||||| ||||| || |||| ||| ||||| || ||||| || || ||||| || Sbjct: 1105 atggaagcggctgatatagacaacaatggatcaatagactatggtgaatttcttgctgct 1164 Query: 264 acattgcatctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttc 323 ||| |||| |||| ||| | || ||||| || ||| || |||| || ||| | || || Sbjct: 1165 acactgcacttgaataagatggaaagagaggagaatttggttgctgctttcgcctatttt 1224 Query: 324 gataaagatggcagtggttacat 346 ||||||||||| ||||||||||| Sbjct: 1225 gataaagatggtagtggttacat 1247 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 11 agcaatgaataaactaaagaagatggc 37 ||||||||||||||| ||||||||||| Sbjct: 912 agcaatgaataaacttaagaagatggc 938
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 276 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 335 ||||| ||||| || |||||| |||| | ||| || ||| ||||||||| ||||||||| Sbjct: 18142173 aacaaagttgaaagggaagatcatctatatgccgccttccaatacttcgacaaagatggc 18142232 Query: 336 agtggttacat 346 ||||| ||||| Sbjct: 18142233 agtggatacat 18142243
>gb|BT005932.1| Arabidopsis thaliana At5g04870 gene, complete cds Length = 1833 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 424 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 483 |||||||||||||||| || || || |||||||| || ||||| | ||||||||||| | Sbjct: 1706 ttgatcaagacaatgacgggcgaatagactacaacgagtttgtggcgatgatgcagaaag 1765 Query: 484 gaa 486 ||| Sbjct: 1766 gaa 1768
>gb|BT002600.1| Arabidopsis thaliana putative calmodulin-domain protein kinase CPK6 (At2g17290) mRNA, complete cds Length = 1735 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 426 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 485 ||||||||||| ||||| ||||| || ||| | |||||||| | |||||||| |||||| Sbjct: 1513 gatcaagacaacgatggacggattgattacgaagaatttgttgcgatgatgcaaaaggga 1572 Query: 486 aat 488 ||| Sbjct: 1573 aat 1575 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||| ||||||||||||| Sbjct: 1099 gcaatgaataaattaaagaagatggc 1124
>dbj|D28582.1|ATHATCDPK Arabidopsis thaliana mRNA for calcium-dependent protein kinase, complete cds Length = 1858 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 426 gatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaaggga 485 ||||||||||| ||||| ||||| || ||| | |||||||| | |||||||| |||||| Sbjct: 1437 gatcaagacaacgatggacggattgattacgaagaatttgttgcgatgatgcaaaaggga 1496 Query: 486 aat 488 ||| Sbjct: 1497 aat 1499 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||| ||||||||||||| Sbjct: 1023 gcaatgaataaattaaagaagatggc 1048
>dbj|AK118706.1| Arabidopsis thaliana At5g04870 mRNA for putative calcium-dependent protein kinase, complete cds, clone: RAFL21-01-N11 Length = 2521 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 424 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 483 |||||||||||||||| || || || |||||||| || ||||| | ||||||||||| | Sbjct: 2167 ttgatcaagacaatgacgggcgaatagactacaacgagtttgtggcgatgatgcagaaag 2226 Query: 484 gaa 486 ||| Sbjct: 2227 gaa 2229
>gb|AF051211.1|AF051211 Picea mariana probable calcium dependent protein kinase (Sb15) mRNA, partial cds Length = 1179 Score = 46.1 bits (23), Expect = 0.14 Identities = 71/87 (81%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggcccttagagtaattgccgagaatctgtctgaagat 71 |||||||||||| | ||||||||||| |||| ||||| || || | |||| || || Sbjct: 262 gcaatgaataaattgaagaagatggcacttatggtaatagctgaaagcttgtcagaggaa 321 Query: 72 gaaattgcagggttgagagagatgttc 98 || |||||||| ||||||||||||||| Sbjct: 322 gagattgcaggtttgagagagatgttc 348
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 276 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 335 ||||| ||||| || |||||| |||| | ||| || ||| ||||||||| ||||||||| Sbjct: 18068494 aacaaagttgaaagggaagatcatctatatgccgccttccaatacttcgacaaagatggc 18068553 Query: 336 agtggttacat 346 ||||| ||||| Sbjct: 18068554 agtggatacat 18068564
>emb|AL845343.5|CNS08CB5 Oryza sativa chromosome 12, . BAC OSJNBa0028O09 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 155927 Score = 46.1 bits (23), Expect = 0.14 Identities = 59/71 (83%) Strand = Plus / Plus Query: 276 aacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaagatggc 335 ||||| ||||| || |||||| |||| | ||| || ||| ||||||||| ||||||||| Sbjct: 95851 aacaaagttgaaagggaagatcatctatatgccgccttccaatacttcgacaaagatggc 95910 Query: 336 agtggttacat 346 ||||| ||||| Sbjct: 95911 agtggatacat 95921
>gb|AY301062.2| Zea mays calcium-dependent protein kinase ZmCPK11 mRNA, complete cds Length = 1738 Score = 46.1 bits (23), Expect = 0.14 Identities = 29/31 (93%) Strand = Plus / Plus Query: 199 ctctaatggaagcggcggatattgataacag 229 ||||||||||||| || |||||||||||||| Sbjct: 1166 ctctaatggaagcagctgatattgataacag 1196
>gb|U69173.1|GMU69173 Glycine max calmodulin-like domain protein kinase isoenzyme beta mRNA, complete cds Length = 1754 Score = 46.1 bits (23), Expect = 0.14 Identities = 113/143 (79%) Strand = Plus / Plus Query: 204 atggaagcggcggatattgataacagtgggtcaattgattatggggagttccttgcggca 263 ||||||||||| ||||| || |||| ||| ||||| || ||||| || || ||||| || Sbjct: 1161 atggaagcggctgatatagacaacaatggatcaatagactatggtgaatttcttgctgct 1220 Query: 264 acattgcatctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttc 323 ||| |||| |||| ||| | || ||||| || ||| || |||| || ||| | || || Sbjct: 1221 acactgcacttgaataagatggaaagagaggagaatttggttgctgctttcgcctatttt 1280 Query: 324 gataaagatggcagtggttacat 346 ||||||||||| ||||||||||| Sbjct: 1281 gataaagatggtagtggttacat 1303 Score = 46.1 bits (23), Expect = 0.14 Identities = 26/27 (96%) Strand = Plus / Plus Query: 11 agcaatgaataaactaaagaagatggc 37 ||||||||||||||| ||||||||||| Sbjct: 968 agcaatgaataaacttaagaagatggc 994
>gb|L15390.1|MZECDPK Zea mays calcium dependent protein kinase (CDPK) mRNA, partial cds Length = 1353 Score = 46.1 bits (23), Expect = 0.14 Identities = 41/47 (87%) Strand = Plus / Plus Query: 304 ttgcagcattctcatacttcgataaagatggcagtggttacattact 350 |||||||||| || || || || |||||| ||||||||||||||||| Sbjct: 1184 ttgcagcattttcctattttgacaaagatagcagtggttacattact 1230
>gb|L14771.1|ATHCALLIPR Arabidopsis thaliana calcium dependent protein kinase (AK1 isoform) mRNA, complete cds Length = 2214 Score = 46.1 bits (23), Expect = 0.14 Identities = 53/63 (84%) Strand = Plus / Plus Query: 424 ttgatcaagacaatgatggccggatcgactacaatgaatttgtaacaatgatgcagaagg 483 |||||||||||||||| || || || |||||||| || ||||| | ||||||||||| | Sbjct: 1855 ttgatcaagacaatgacgggcgaatagactacaacgagtttgtggcgatgatgcagaaag 1914 Query: 484 gaa 486 ||| Sbjct: 1915 gaa 1917
>gb|AC115295.4| Mus musculus BAC clone RP23-188O19 from 3, complete sequence Length = 202201 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 181 aagagtcagaaattgcaactct 202 |||||||||||||||||||||| Sbjct: 73096 aagagtcagaaattgcaactct 73117
>emb|CR931808.2| Medicago truncatula chromosome 5 clone mth2-144o15, COMPLETE SEQUENCE Length = 124859 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Minus Query: 12 gcaatgaataaactaaagaagatggc 37 ||||||||||| |||||||||||||| Sbjct: 30203 gcaatgaataagctaaagaagatggc 30178
>dbj|AP008215.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, complete sequence Length = 22696651 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 451 actacaatgaatttgtaacaat 472 |||||||||||||||||||||| Sbjct: 293794 actacaatgaatttgtaacaat 293815
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 44.1 bits (22), Expect = 0.54 Identities = 30/33 (90%) Strand = Plus / Plus Query: 5 gttttnagcaatgaataaactaaagaagatggc 37 ||||| |||||||||||| ||||||||||||| Sbjct: 28107494 gttttcagcaatgaataagttaaagaagatggc 28107526 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 321 ttcgataaagatggcagtggttacattac 349 ||||| ||||||||||||||||| ||||| Sbjct: 28108900 ttcgacaaagatggcagtggttatattac 28108928
>dbj|AP006061.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, PAC clone:P0414D03 Length = 169823 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 451 actacaatgaatttgtaacaat 472 |||||||||||||||||||||| Sbjct: 42393 actacaatgaatttgtaacaat 42414
>dbj|AP006058.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 9, BAC clone:OSJNBa0066B16 Length = 190143 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 451 actacaatgaatttgtaacaat 472 |||||||||||||||||||||| Sbjct: 189292 actacaatgaatttgtaacaat 189313
>gb|AC002329.2|AC002329 Arabidopsis thaliana chromosome II section 100 of 255 of the complete sequence. Sequence from clones T23A1, F5J6, MJB20 Length = 76170 Score = 44.1 bits (22), Expect = 0.54 Identities = 25/26 (96%) Strand = Plus / Plus Query: 12 gcaatgaataaactaaagaagatggc 37 |||||||||||| ||||||||||||| Sbjct: 19260 gcaatgaataaattaaagaagatggc 19285
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 tggacactgacaatagtggcca 127 |||||||||||||||||||||| Sbjct: 135607 tggacactgacaatagtggcca 135586
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06 Length = 138157 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 106 tggacactgacaatagtggcca 127 |||||||||||||||||||||| Sbjct: 90094 tggacactgacaatagtggcca 90115 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 106 tggacactgacaatagtggcca 127 |||||||||||||||||||||| Sbjct: 30913 tggacactgacaatagtggcca 30892
>dbj|AP004071.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OJ1717_A09 Length = 203132 Score = 44.1 bits (22), Expect = 0.54 Identities = 30/33 (90%) Strand = Plus / Plus Query: 5 gttttnagcaatgaataaactaaagaagatggc 37 ||||| |||||||||||| ||||||||||||| Sbjct: 97141 gttttcagcaatgaataagttaaagaagatggc 97173 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 321 ttcgataaagatggcagtggttacattac 349 ||||| ||||||||||||||||| ||||| Sbjct: 98547 ttcgacaaagatggcagtggttatattac 98575
>gb|U90262.1|CPU90262 Cucurbita pepo calcium-dependent calmodulin-independent protein kinase CDPK (cpCPK1) mRNA, complete cds Length = 2550 Score = 44.1 bits (22), Expect = 0.54 Identities = 52/62 (83%) Strand = Plus / Plus Query: 93 atgttcaaaatgctggacactgacaatagtggccaaatcacattggaggaactaaaaact 152 |||||||| ||| | || |||||||| || |||||||||||||| || ||||| ||| || Sbjct: 1845 atgttcaagatgatagatactgacaacagcggccaaatcacatttgaagaactcaaagct 1904 Query: 153 gg 154 || Sbjct: 1905 gg 1906 Score = 42.1 bits (21), Expect = 2.1 Identities = 108/137 (78%) Strand = Plus / Plus Query: 246 ggggagttccttgcggcaacattgcatctgaacaaggttgagagagaagataatctgttt 305 ||||||||| | || || ||||||||||| ||||| | |||| |||||| |||| | Sbjct: 1998 ggggagttcgtagctgccacattgcatctaaacaaaatcgagaaggaagatcatcttcta 2057 Query: 306 gcagcattctcatacttcgataaagatggcagtggttacattactcaagatgaactgcaa 365 ||||| || ||||| ||||| |||||||| || || | |||||| || || || || ||| Sbjct: 2058 gcagcgttttcatatttcgacaaagatggaagcgggttcattacccacgacgagcttcaa 2117 Query: 366 aaagcatgtgaagagtt 382 |||||||| ||||||| Sbjct: 2118 caagcatgtaaagagtt 2134
>gb|AC139243.4| Mus musculus BAC clone RP23-440G4 from 3, complete sequence Length = 198621 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 181 aagagtcagaaattgcaactct 202 |||||||||||||||||||||| Sbjct: 164787 aagagtcagaaattgcaactct 164766
>gb|DQ250026.1| Hordeum brevisubulatum calcium-dependent protein kinase (CDPK) mRNA, complete cds Length = 2094 Score = 44.1 bits (22), Expect = 0.54 Identities = 28/30 (93%) Strand = Plus / Plus Query: 11 agcaatgaataaactaaagaagatggccct 40 ||||||||||||||| || ||||||||||| Sbjct: 1399 agcaatgaataaactgaaaaagatggccct 1428
>ref|NM_122264.3| Arabidopsis thaliana CDPK9 (CALCIUM-DEPENDENT PROTEIN KINASE 9); ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinas> AT5G23580 (CDPK9) mRNA, complete cds Length = 1974 Score = 42.1 bits (21), Expect = 2.1 Identities = 180/233 (77%) Strand = Plus / Plus Query: 210 gcggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattg 269 ||||| ||| ||||| | ||||| ||||||| ||||| |||||| | || |||||| | Sbjct: 1207 gcggctgatgttgatgagagtggaacaattgactatggagagttcttagctgcaacaatc 1266 Query: 270 catctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaa 329 || |||||||| | |||||||| || ||||| | || |||||||| | ||| ||||| Sbjct: 1267 cacttgaacaagctggagagagaggagaatctagtagctgcattctctttctttgataag 1326 Query: 330 gatggcagtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtata 389 |||| ||||||||||| ||| || || || ||| | ||||| | |||||||||||| Sbjct: 1327 gatgcaagtggttacatcactatcgaagagcttcaacaggcatggaaggagtttggtata 1386 Query: 390 ggagatgcacatcttgacgatattatccgagacattgatcaagacaatgatgg 442 ||| | ||||||| || || ||| ||||||||||||||| |||||||| Sbjct: 1387 aacgattctaatcttgatgaaatgatcaaagacattgatcaagataatgatgg 1439
>ref|NM_119985.2| Arabidopsis thaliana CPK26; ATP binding / calcium ion binding / calcium- and calmodulin-dependent protein kinase/ kinase/ protein kinase/ protein se> AT4G38230 (CPK26) mRNA, complete cds Length = 1800 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 216 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 275 |||||||| || |||||| | || |||||||| || ||| |||| |||||| | |||||| Sbjct: 1234 gatattgacaagagtgggaccatagattatggtgaattcattgctgcaacaatccatctg 1293 Query: 276 aacaa 280 ||||| Sbjct: 1294 aacaa 1298
>gb|AY394009.1| Vitis labrusca x Vitis vinifera calcium-dependent protein kinase (VCPK1) mRNA, complete cds Length = 1714 Score = 42.1 bits (21), Expect = 2.1 Identities = 36/41 (87%) Strand = Plus / Plus Query: 219 attgataacagtgggtcaattgattatggggagttccttgc 259 ||||| |||||||| |||| ||||||||||| |||||||| Sbjct: 1221 attgacaacagtggaacaatagattatggggaattccttgc 1261
>gb|AC183677.2| Pan troglodytes BAC clone CH251-520E8 from chromosome 9, complete sequence Length = 174731 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 126978 caatgaatttgtcacaatgatggagaaaggaaa 127010
>emb|CR719968.2|CNS0GIH2 Tetraodon nigroviridis full-length cDNA Length = 1174 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 449 cgactacaatgaatttgtaac 469 ||||||||||||||||||||| Sbjct: 389 cgactacaatgaatttgtaac 409
>emb|BX255923.13| Human DNA sequence from clone RP11-115J7 on chromosome 9 Contains the 5' end of a pseudogene similar to part of phosphoglucomutase 5 (PGRM) (PGM5), a novel gene, the gene for a novel forkhead box D4 (FOXD4) protein, the gene for a novel protein similar to COBW domain containing 1 (CBWD1) and four CpG islands, complete sequence Length = 179342 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 127138 caatgaatttgtcacaatgatggagaaaggaaa 127106
>emb|AL591385.7| Human DNA sequence from clone RP11-391M20 on chromosome 9 Contains a novel gene similar to phosphoglucomutase 5 (PGM5), a pseudogene similar to part of FSHD region gene 1 (FRG1) and two CpG island, complete sequence Length = 174765 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 149125 caatgaatttgtcacaatgatggagaaaggaaa 149157
>emb|AL449043.16| Human DNA sequence from clone RP11-143M1 on chromosome 9 Contains four novel genes, the FOXD4 gene for forkhead box D4 (FKHL9, FREAC5), a novel pseudogene similar to phosphoglucomutase 5 (PGM5), the 3' end of the COBW-like protein (LOC55871) and three CpG islands, complete sequence Length = 97906 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 44935 caatgaatttgtcacaatgatggagaaaggaaa 44967
>emb|AL353608.20| Human DNA sequence from clone RP11-561O23 on chromosome 9 Contains four novel genes, the CBWD3 gene for COBW domain containing 3, the FOXD4L3 gene for forkhead box D4 like 3, the 5' end of the PGM5 gene for phosphoglucomutase 5, and four CpG islands, complete sequence Length = 172991 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 133014 caatgaatttgtcacaatgatggagaaaggaaa 132982
>gb|AC183111.3| Pan troglodytes BAC clone CH251-294L3 from chromosome 9, complete sequence Length = 150130 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 102378 caatgaatttgtcacaatgatggagaaaggaaa 102410
>emb|AL662986.3|OSJN00187 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0087H01, complete sequence Length = 166906 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 cagtggttacattactcaaga 355 ||||||||||||||||||||| Sbjct: 48116 cagtggttacattactcaaga 48136
>emb|AL161593.2|ATCHRIV89 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 89 Length = 199789 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 216 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 275 |||||||| || |||||| | || |||||||| || ||| |||| |||||| | |||||| Sbjct: 38352 gatattgacaagagtgggaccatagattatggtgaattcattgctgcaacaatccatctg 38293 Query: 276 aacaa 280 ||||| Sbjct: 38292 aacaa 38288
>emb|AL035538.1|ATF20D10 Arabidopsis thaliana DNA chromosome 4, BAC clone F20D10 (ESSA project) Length = 147215 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Minus Query: 216 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 275 |||||||| || |||||| | || |||||||| || ||| |||| |||||| | |||||| Sbjct: 117430 gatattgacaagagtgggaccatagattatggtgaattcattgctgcaacaatccatctg 117371 Query: 276 aacaa 280 ||||| Sbjct: 117370 aacaa 117366
>emb|AL445925.19| Human DNA sequence from clone RP11-403A15 on chromosome 9 Contains a pseudogene similar to part of FSHD region gene 1 (FSG1) (FRG1), a pseudogene similar to part of phosphoglucomutase 5 (PGRM) (PGM5) and four CpG islands, complete sequence Length = 196461 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 150142 caatgaatttgtcacaatgatggagaaaggaaa 150174
>gb|AC008479.6| Homo sapiens chromosome 5 clone CTC-392L24, complete sequence Length = 176691 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 aatctgtctgaagatgaaatt 77 ||||||||||||||||||||| Sbjct: 102600 aatctgtctgaagatgaaatt 102580
>gb|AC112165.2| Homo sapiens chromosome 5 clone CTB-128F12, complete sequence Length = 113127 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 57 aatctgtctgaagatgaaatt 77 ||||||||||||||||||||| Sbjct: 17211 aatctgtctgaagatgaaatt 17191
>gb|AC182393.2| Pan troglodytes BAC clone CH251-503C15 from chromosome 9, complete sequence Length = 230693 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 53040 caatgaatttgtcacaatgatggagaaaggaaa 53008
>gb|AF418563.3| Solanum tuberosum calcium-dependent protein kinase 2 mRNA, complete cds Length = 1702 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 321 ttcgataaagatggcagtggttacattac 349 |||||||||||||||||||| | |||||| Sbjct: 1372 ttcgataaagatggcagtgggttcattac 1400
>emb|CR387925.5| Human DNA sequence from clone RP11-58A12 on chromosome 9, complete sequence Length = 172519 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 120933 caatgaatttgtcacaatgatggagaaaggaaa 120965
>gb|U20388.1|ATACDPK9 Arabidopsis thaliana calcium dependent protein kinase mRNA, complete cds Length = 1693 Score = 42.1 bits (21), Expect = 2.1 Identities = 180/233 (77%) Strand = Plus / Plus Query: 210 gcggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattg 269 ||||| ||| ||||| | ||||| ||||||| ||||| |||||| | || |||||| | Sbjct: 1145 gcggctgatgttgatgagagtggaacaattgactatggagagttcttagctgcaacaatc 1204 Query: 270 catctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaa 329 || |||||||| | |||||||| || ||||| | || |||||||| | ||| ||||| Sbjct: 1205 cacttgaacaagctggagagagaggagaatctagtagctgcattctctttctttgataag 1264 Query: 330 gatggcagtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtata 389 |||| ||||||||||| ||| || || || ||| | ||||| | |||||||||||| Sbjct: 1265 gatgcaagtggttacatcactatcgaagagcttcaacaggcatggaaggagtttggtata 1324 Query: 390 ggagatgcacatcttgacgatattatccgagacattgatcaagacaatgatgg 442 ||| | ||||||| || || ||| ||||||||||||||| |||||||| Sbjct: 1325 aacgattctaatcttgatgaaatgatcaaagacattgatcaagataatgatgg 1377
>ref|NM_059962.2| Caenorhabditis elegans C36B1.5 (C36B1.5) mRNA, complete cds Length = 1589 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 61 tgtctgaagatgaaattgcag 81 ||||||||||||||||||||| Sbjct: 349 tgtctgaagatgaaattgcag 369
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 335 cagtggttacattactcaaga 355 ||||||||||||||||||||| Sbjct: 14315196 cagtggttacattactcaaga 14315216
>emb|BX827943.1|CNS0A3UI Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH37ZE02 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1800 Score = 42.1 bits (21), Expect = 2.1 Identities = 54/65 (83%) Strand = Plus / Plus Query: 216 gatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgcatctg 275 |||||||| || |||||| | || |||||||| || ||| |||| |||||| | |||||| Sbjct: 1234 gatattgacaagagtgggaccatagattatggtgaattcattgctgcaacaatccatctg 1293 Query: 276 aacaa 280 ||||| Sbjct: 1294 aacaa 1298
>emb|BX832558.1|CNS0A1KZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH80ZA09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1640 Score = 42.1 bits (21), Expect = 2.1 Identities = 180/233 (77%) Strand = Plus / Plus Query: 210 gcggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattg 269 ||||| ||| ||||| | ||||| ||||||| ||||| |||||| | || |||||| | Sbjct: 1208 gcggctgatgttgatgagagtggaacaattgactatggagagttcttagctgcaacaatc 1267 Query: 270 catctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaa 329 || |||||||| | |||||||| || ||||| | || |||||||| | ||| ||||| Sbjct: 1268 cacttgaacaagctggagagagaggagaatctagtagctgcattctctttctttgataag 1327 Query: 330 gatggcagtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtata 389 |||| ||||||||||| ||| || || || ||| | ||||| | |||||||||||| Sbjct: 1328 gatgcaagtggttacatcactatcgaagagcttcaacaggcatggaaggagtttggtata 1387 Query: 390 ggagatgcacatcttgacgatattatccgagacattgatcaagacaatgatgg 442 ||| | ||||||| || || ||| ||||||||||||||| |||||||| Sbjct: 1388 aacgattctaatcttgatgaaatgatcaaagacattgatcaagataatgatgg 1440
>emb|BX830884.1|CNS0A0OT Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS36ZC01 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1720 Score = 42.1 bits (21), Expect = 2.1 Identities = 180/233 (77%) Strand = Plus / Plus Query: 210 gcggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattg 269 ||||| ||| ||||| | ||||| ||||||| ||||| |||||| | || |||||| | Sbjct: 1184 gcggctgatgttgatgagagtggaacaattgactatggagagttcttagctgcaacaatc 1243 Query: 270 catctgaacaaggttgagagagaagataatctgtttgcagcattctcatacttcgataaa 329 || |||||||| | |||||||| || ||||| | || |||||||| | ||| ||||| Sbjct: 1244 cacttgaacaagctggagagagaggagaatctagtagctgcattctctttctttgataag 1303 Query: 330 gatggcagtggttacattactcaagatgaactgcaaaaagcatgtgaagagtttggtata 389 |||| ||||||||||| ||| || || || ||| | ||||| | |||||||||||| Sbjct: 1304 gatgcaagtggttacatcactatcgaagagcttcaacaggcatggaaggagtttggtata 1363 Query: 390 ggagatgcacatcttgacgatattatccgagacattgatcaagacaatgatgg 442 ||| | ||||||| || || ||| ||||||||||||||| |||||||| Sbjct: 1364 aacgattctaatcttgatgaaatgatcaaagacattgatcaagataatgatgg 1416
>gb|AC150905.2| Pan troglodytes BAC clone RP43-100G12 from chromosome unknown, complete sequence Length = 46540 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Plus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 42547 caatgaatttgtcacaatgatggagaaaggaaa 42579
>gb|AY176041.1| Paralichthys olivaceus calmodulin mRNA, partial cds Length = 437 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Plus Query: 320 cttcgataaagatggcagtggttacatta 348 ||||||||| ||||||| ||||||||||| Sbjct: 25 cttcgataaggatggcaatggttacatta 53
>dbj|AP004269.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0048D08 Length = 145772 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 tggacactgacaatagtggcc 126 ||||||||||||||||||||| Sbjct: 37842 tggacactgacaatagtggcc 37862
>dbj|BS000143.1| Pan troglodytes chromosome 22 clone:PTF22-005L11, map 22, complete sequences Length = 35971 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 29538 caatgaatttgtcacaatgatggagaaaggaaa 29506
>emb|AL731809.17| Human DNA sequence from clone RP13-354N4 on chromosome 9, complete sequence Length = 202611 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 157432 caatgaatttgtcacaatgatggagaaaggaaa 157400
>emb|Z80215.1|CEC36B1 Caenorhabditis elegans Cosmid C36B1, complete sequence Length = 44996 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 61 tgtctgaagatgaaattgcag 81 ||||||||||||||||||||| Sbjct: 21803 tgtctgaagatgaaattgcag 21783
>emb|AL078621.19|HSA395L14 Human DNA sequence from clone RP11-395L14. Contains (part of) up to six novel genes or pseudogenes, the gene for a novel forkhead protein similar to FOXD4 (forkhead box D4, FREAC5), the gene for a novel phosphoglucomutase like protein, a pseudogene similar to part of DEAD/H (Asp-Glu-Ala-Asp/His) box (S.cerevisiae CHL1-like helicase), an RPL23A (60S ribosomal protein L23A) pseudogene, the RABL2A gene for RAB-like 2A, the gene for a novel protein similar to small nuclear ribonucleoprotein polypeptide A' (SNRPA1) and the 3' part of the gene for a novel protein similar to acrosin (ACR). Contains ESTs, STSs, GSSs and nine putative CpG islands, complete sequence Length = 176734 Score = 42.1 bits (21), Expect = 2.1 Identities = 30/33 (90%) Strand = Plus / Minus Query: 455 caatgaatttgtaacaatgatgcagaagggaaa 487 |||||||||||| ||||||||| |||| ||||| Sbjct: 44053 caatgaatttgtcacaatgatggagaaaggaaa 44021
>gb|AC107704.8| Mus musculus chromosome 7, clone RP24-121L4, complete sequence Length = 194458 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 339 ggttacattactcaagatga 358 |||||||||||||||||||| Sbjct: 47868 ggttacattactcaagatga 47849
>gb|AC128643.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0007B15 map S10318, complete sequence Length = 125243 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 307 cagcattctcatacttcgataaagatggcagtggtt 342 |||||||||||| ||||| |||||||| ||||||| Sbjct: 70300 cagcattctcatttttcgacaaagatggaagtggtt 70265
>gb|AY341376.1| Pinctada fucata calmodulin mRNA, complete cds Length = 739 Score = 40.1 bits (20), Expect = 8.5 Identities = 26/28 (92%) Strand = Plus / Plus Query: 321 ttcgataaagatggcagtggttacatta 348 |||||||||||||||| ||||| ||||| Sbjct: 346 ttcgataaagatggcaatggtttcatta 373
>gb|AY144497.1| Oryza sativa (japonica cultivar-group) OsCDPK protein mRNA, complete cds Length = 1907 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 307 cagcattctcatacttcgataaagatggcagtggtt 342 |||||||||||| ||||| |||||||| ||||||| Sbjct: 1312 cagcattctcatttttcgacaaagatggaagtggtt 1347
>emb|CR936462.9| Zebrafish DNA sequence from clone DKEY-259H22 in linkage group 5, complete sequence Length = 40246 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 584 agtcatttgctatgctaatg 603 |||||||||||||||||||| Sbjct: 14414 agtcatttgctatgctaatg 14395
>emb|AL136363.4| Human DNA sequence from clone RP6-43L17 on chromosome Xq21.1-21.33, complete sequence Length = 93296 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 13 caatgaataaactaaagaagatgg 36 ||||||||||||||||||| |||| Sbjct: 47076 caatgaataaactaaagaaaatgg 47053
>emb|CR543861.1| Acinetobacter sp. ADP1 complete genome Length = 3598621 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 56 gaatctgtctgaagatgaaattgc 79 |||||||||||| ||||||||||| Sbjct: 2441070 gaatctgtctgatgatgaaattgc 2441047
>emb|AL161515.2|ATCHRIV27 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 27 Length = 197394 Score = 40.1 bits (20), Expect = 8.5 Identities = 68/84 (80%) Strand = Plus / Plus Query: 212 ggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgca 271 ||||||||| || ||||||||| |||| || || || || ||||| || || ||||| || Sbjct: 69326 ggcggatatagacaacagtgggacaatagactacggtgaattcctagcagcgacattaca 69385 Query: 272 tctgaacaaggttgagagagaaga 295 | | |||||| | ||||||||||| Sbjct: 69386 tataaacaagatggagagagaaga 69409
>emb|AL161831.1|ATT25P22 Arabidopsis thaliana DNA chromosome 4, BAC clone T25P22 (ESSA project) Length = 97876 Score = 40.1 bits (20), Expect = 8.5 Identities = 68/84 (80%) Strand = Plus / Plus Query: 212 ggcggatattgataacagtgggtcaattgattatggggagttccttgcggcaacattgca 271 ||||||||| || ||||||||| |||| || || || || ||||| || || ||||| || Sbjct: 22168 ggcggatatagacaacagtgggacaatagactacggtgaattcctagcagcgacattaca 22227 Query: 272 tctgaacaaggttgagagagaaga 295 | | |||||| | ||||||||||| Sbjct: 22228 tataaacaagatggagagagaaga 22251
>emb|CR854914.10| Zebrafish DNA sequence from clone DKEY-256M11 in linkage group 5, complete sequence Length = 103750 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 145 taaaaactggcttgcagaga 164 |||||||||||||||||||| Sbjct: 75989 taaaaactggcttgcagaga 75970
>gb|AC110012.5| Homo sapiens chromosome 8, clone CTD-2024L13, complete sequence Length = 163126 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 581 cccagtcatttgctatgctaatga 604 |||||||||||||| ||||||||| Sbjct: 107523 cccagtcatttgctttgctaatga 107546
>gb|AC090137.4| Homo sapiens chromosome 8, clone RP11-56A10, complete sequence Length = 169989 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 576 tgtgccccagtcatttgctatgct 599 ||||||||||||| |||||||||| Sbjct: 112983 tgtgccccagtcacttgctatgct 113006
>gb|AC025460.7| Homo sapiens chromosome 5 clone CTD-2235E24, complete sequence Length = 214636 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 aaagaagatggcccttagag 45 |||||||||||||||||||| Sbjct: 100387 aaagaagatggcccttagag 100368
>gb|AC022880.10| Homo sapiens chromosome , clone RP11-436P7, complete sequence Length = 166306 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 286 agagagaagataatctgtttgcag 309 |||||||| ||||||||||||||| Sbjct: 12795 agagagaaaataatctgtttgcag 12772
>gb|AC022832.13| Homo sapiens chromosome 8, clone RP11-145O15, complete sequence Length = 166236 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Plus Query: 286 agagagaagataatctgtttgcag 309 |||||||| ||||||||||||||| Sbjct: 1712 agagagaaaataatctgtttgcag 1735
>gb|AC090568.5| Homo sapiens chromosome 8, clone RP11-69I13, complete sequence Length = 166398 Score = 40.1 bits (20), Expect = 8.5 Identities = 23/24 (95%) Strand = Plus / Minus Query: 581 cccagtcatttgctatgctaatga 604 |||||||||||||| ||||||||| Sbjct: 164021 cccagtcatttgctttgctaatga 163998
>gb|AC091832.3| Homo sapiens chromosome 5 clone CTD-2029E14, complete sequence Length = 187969 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 26 aaagaagatggcccttagag 45 |||||||||||||||||||| Sbjct: 137431 aaagaagatggcccttagag 137412
>gb|CP000254.1| Methanospirillum hungatei JF-1, complete genome Length = 3544738 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 352 aagatgaactgcaaaaagca 371 |||||||||||||||||||| Sbjct: 2134457 aagatgaactgcaaaaagca 2134438
>gb|U20626.1|ATU20626 Arabidopsis thaliana calcium-dependent protein kinase (CDPK9) gene, complete cds Length = 4420 Score = 40.1 bits (20), Expect = 8.5 Identities = 89/112 (79%) Strand = Plus / Plus Query: 235 caattgattatggggagttccttgcggcaacattgcatctgaacaaggttgagagagaag 294 ||||||| ||||| |||||| | || |||||| | || |||||||| | |||||||| | Sbjct: 2777 caattgactatggagagttcttagctgcaacaatccacttgaacaagctggagagagagg 2836 Query: 295 ataatctgtttgcagcattctcatacttcgataaagatggcagtggttacat 346 | ||||| | || |||||||| | ||| ||||| |||| ||||||||||| Sbjct: 2837 agaatctagtagctgcattctctttctttgataaggatgcaagtggttacat 2888
>gb|AC148965.3| Medicago truncatula chromosome 7 BAC clone mth2-10f21, complete sequence Length = 97477 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 275 gaacaaggttgagagagaag 294 |||||||||||||||||||| Sbjct: 50621 gaacaaggttgagagagaag 50602
>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete sequence Length = 28386948 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 307 cagcattctcatacttcgataaagatggcagtggtt 342 |||||||||||| ||||| |||||||| ||||||| Sbjct: 3476345 cagcattctcatttttcgacaaagatggaagtggtt 3476310
>gb|AC096725.3| Homo sapiens BAC clone RP11-25L5 from 4, complete sequence Length = 182627 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 387 ataggagatgcacatcttga 406 |||||||||||||||||||| Sbjct: 14369 ataggagatgcacatcttga 14350
>gb|AC113346.2| Homo sapiens chromosome 5 clone CTD-2532K18, complete sequence Length = 175075 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 498 gggaaaaagggacaagggca 517 |||||||||||||||||||| Sbjct: 81670 gggaaaaagggacaagggca 81651
>dbj|AB025633.2| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MQM1 Length = 81365 Score = 40.1 bits (20), Expect = 8.5 Identities = 89/112 (79%) Strand = Plus / Minus Query: 235 caattgattatggggagttccttgcggcaacattgcatctgaacaaggttgagagagaag 294 ||||||| ||||| |||||| | || |||||| | || |||||||| | |||||||| | Sbjct: 29863 caattgactatggagagttcttagctgcaacaatccacttgaacaagctggagagagagg 29804 Query: 295 ataatctgtttgcagcattctcatacttcgataaagatggcagtggttacat 346 | ||||| | || |||||||| | ||| ||||| |||| ||||||||||| Sbjct: 29803 agaatctagtagctgcattctctttctttgataaggatgcaagtggttacat 29752
>dbj|AK102308.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033090B04, full insert sequence Length = 2524 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Plus Query: 307 cagcattctcatacttcgataaagatggcagtggtt 342 |||||||||||| ||||| |||||||| ||||||| Sbjct: 1941 cagcattctcatttttcgacaaagatggaagtggtt 1976
>emb|BX470116.5| Zebrafish DNA sequence from clone DKEY-244B23 in linkage group 4, complete sequence Length = 195795 Score = 40.1 bits (20), Expect = 8.5 Identities = 20/20 (100%) Strand = Plus / Minus Query: 301 tgtttgcagcattctcatac 320 |||||||||||||||||||| Sbjct: 109004 tgtttgcagcattctcatac 108985
>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence Length = 28369397 Score = 40.1 bits (20), Expect = 8.5 Identities = 32/36 (88%) Strand = Plus / Minus Query: 307 cagcattctcatacttcgataaagatggcagtggtt 342 |||||||||||| ||||| |||||||| ||||||| Sbjct: 3485049 cagcattctcatttttcgacaaagatggaagtggtt 3485014 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,705,838 Number of Sequences: 3902068 Number of extensions: 5705838 Number of successful extensions: 104995 Number of sequences better than 10.0: 124 Number of HSP's better than 10.0 without gapping: 125 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 104388 Number of HSP's gapped (non-prelim): 605 length of query: 623 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 600 effective length of database: 17,143,297,704 effective search space: 10285978622400 effective search space used: 10285978622400 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
