>ref|XM_658082.1| Aspergillus nidulans FGSC A4 hypothetical protein (AN5570.2), mRNA
          Length = 2613

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                
Query: 160 ttgacgcagcttctcgtcggg 180
           |||||||||||||||||||||
Sbjct: 688 ttgacgcagcttctcgtcggg 668

>gb|AC114770.4| Homo sapiens BAC clone RP11-422D16 from 4, complete sequence
          Length = 127953

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                      
Query: 23    cctcccatcccctcccgtaccctcc 47
             |||||||||||||||| ||||||||
Sbjct: 30106 cctcccatcccctcccataccctcc 30130

>gb|AC098685.7| Mus musculus clone ct7-393l21, complete sequence
          Length = 73632

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 456   ttcagtgacgaacactaatag 476
             |||||||||||||||||||||
Sbjct: 26093 ttcagtgacgaacactaatag 26113

>gb|AF288647.1|AF288647 Hantavirus AH211 nucleocapsid protein mRNA, complete cds
          Length = 1724

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 291  catggctcctaaccccacccacaac 315
            |||||||||||| ||||||||||||
Sbjct: 1532 catggctcctaaacccacccacaac 1508

>gb|AF285264.1|AF285264 Hantavirus AH09 segment S nucleocapsid protein gene, complete cds
          Length = 1724

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 291  catggctcctaaccccacccacaac 315
            |||||||||||| ||||||||||||
Sbjct: 1532 catggctcctaaacccacccacaac 1508

>dbj|AB027523.1| Hantaan virus RNA for nucleocapsid protein, complete cds
          Length = 1654

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                     
Query: 291  catggctcctaaccccacccacaac 315
            |||||||||||| ||||||||||||
Sbjct: 1497 catggctcctaaacccacccacaac 1473

>gb|AC133169.3| Mus musculus BAC clone RP24-259I15 from 9, complete sequence
          Length = 163930

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 30/33 (90%)
 Strand = Plus / Plus

                                              
Query: 23    cctcccatcccctcccgtaccctcctccaacct 55
             |||||| ||||||||| | ||||||||||||||
Sbjct: 89848 cctcccctcccctcccctcccctcctccaacct 89880

>emb|AL844180.6| Mouse DNA sequence from clone RP23-403A4 on chromosome 4, complete
              sequence
          Length = 213870

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 456    ttcagtgacgaacactaatag 476
              |||||||||||||||||||||
Sbjct: 138938 ttcagtgacgaacactaatag 138958

>ref|XM_517799.1| PREDICTED: Pan troglodytes similar to Oral-facial-digital syndrome 1
            protein (Protein 71-7A) (LOC461914), mRNA
          Length = 3018

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 217  atctcgccattgtgaagcac 236
            ||||||||||||||||||||
Sbjct: 1754 atctcgccattgtgaagcac 1735

>gb|AC142167.4| Mus musculus BAC clone RP24-117F4 from chromosome 3, complete sequence
          Length = 190937

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 23     cctcccatcccctcccgtaccctcctcc 50
              |||||| ||||||||||| |||||||||
Sbjct: 138893 cctcccctcccctcccgtcccctcctcc 138920

>gb|AC154910.3| Mus musculus BAC clone RP23-70L9 from chromosome 12, complete sequence
          Length = 243671

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     cccttcctcccacctcgcagcccc 97
              ||||||||||| ||||||||||||
Sbjct: 239531 cccttcctcccccctcgcagcccc 239554

>gb|AC183833.2| Pan troglodytes BAC clone CH251-141C5 from chromosome 7, complete
              sequence
          Length = 155911

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 23     cctcccatcccctcccgtaccctc 46
              |||||||||||||||||| |||||
Sbjct: 115830 cctcccatcccctcccgtcccctc 115853

>ref|XM_988998.1| PREDICTED: Mus musculus cDNA sequence BC057079 (BC057079), mRNA
          Length = 5802

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 3415 tcatctgttgtccagacatg 3396

>ref|XM_922915.2| PREDICTED: Mus musculus cDNA sequence BC057079, transcript variant 12
            (BC057079), mRNA
          Length = 3718

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 1331 tcatctgttgtccagacatg 1312

>ref|XM_989294.1| PREDICTED: Mus musculus cDNA sequence BC057079, transcript variant 13
            (BC057079), mRNA
          Length = 5555

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 3168 tcatctgttgtccagacatg 3149

>ref|XM_989413.1| PREDICTED: Mus musculus cDNA sequence BC057079, transcript variant 14
            (BC057079), mRNA
          Length = 5538

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 3151 tcatctgttgtccagacatg 3132

>ref|XM_913780.2| PREDICTED: Mus musculus cDNA sequence BC057079, transcript variant 8
            (BC057079), mRNA
          Length = 5796

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 3409 tcatctgttgtccagacatg 3390

>ref|XM_899419.2| PREDICTED: Mus musculus cDNA sequence BC057079, transcript variant 4
            (BC057079), mRNA
          Length = 5990

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 3460 tcatctgttgtccagacatg 3441

>ref|XM_899424.2| PREDICTED: Mus musculus cDNA sequence BC057079, transcript variant 6
            (BC057079), mRNA
          Length = 3718

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 1331 tcatctgttgtccagacatg 1312

>ref|XM_001001702.1| PREDICTED: Mus musculus cDNA sequence BC057079, transcript variant 7
            (BC057079), mRNA
          Length = 5555

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 3168 tcatctgttgtccagacatg 3149

>ref|XM_283973.6| PREDICTED: Mus musculus cDNA sequence BC057079, transcript variant 1
            (BC057079), mRNA
          Length = 5796

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 3409 tcatctgttgtccagacatg 3390

>gb|BC057079.1| Mus musculus cDNA sequence BC057079, mRNA (cDNA clone IMAGE:5698561),
            partial cds
          Length = 4290

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 1887 tcatctgttgtccagacatg 1868

>gb|AC125176.4| Mus musculus BAC clone RP24-574O24 from chromosome 3, complete sequence
          Length = 162693

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                          
Query: 23     cctcccatcccctcccgtaccctcctcc 50
              |||||| ||||||||||| |||||||||
Sbjct: 116548 cctcccctcccctcccgtcccctcctcc 116575

>gb|AC122407.4| Mus musculus BAC clone RP24-129G24 from chromosome 12, complete sequence
          Length = 137860

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 74     cccttcctcccacctcgcagcccc 97
              ||||||||||| ||||||||||||
Sbjct: 128773 cccttcctcccccctcgcagcccc 128750

>emb|AL731714.9| Mouse DNA sequence from clone RP23-117H24 on chromosome 11 Contains the
              gene for a novel protein (4933427E13Rik), complete sequence
          Length = 208133

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 66     cctccgctcccttcctcccacctc 89
              ||||| ||||||||||||||||||
Sbjct: 195232 cctcccctcccttcctcccacctc 195255

>emb|CR853303.6| Pig DNA sequence from clone PigE-173F2, complete sequence
          Length = 151259

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 29/32 (90%)
 Strand = Plus / Minus

                                             
Query: 22    acctcccatcccctcccgtaccctcctccaac 53
             |||| ||||| ||||||||| |||||||||||
Sbjct: 86083 acctaccatcacctcccgtaacctcctccaac 86052

>emb|BX572638.13| Mouse DNA sequence from clone RP23-240N23 on chromosome 4, complete
            sequence
          Length = 47459

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 6434 tcatctgttgtccagacatg 6415

>gb|BC089005.1| Mus musculus cDNA sequence BC057079, mRNA (cDNA clone IMAGE:6842091),
            containing frame-shift errors
          Length = 5479

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 3075 tcatctgttgtccagacatg 3056

>gb|AF332860.1|AF332860S1 Mus musculus diadenosine triphosphate hydrolase (Fhit) gene, exons 3 and
              4
          Length = 147968

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 431    caaatgtgttttgtcccttgtgca 454
              |||| |||||||||||||||||||
Sbjct: 143765 caaaggtgttttgtcccttgtgca 143788

>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 303      ccccacccacaaccttcgcc 322
                ||||||||||||||||||||
Sbjct: 13180820 ccccacccacaaccttcgcc 13180839



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 303      ccccacccacaaccttcgcc 322
                ||||||||||||||||||||
Sbjct: 13179519 ccccacccacaaccttcgcc 13179538



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 303      ccccacccacaaccttcgcc 322
                ||||||||||||||||||||
Sbjct: 13176573 ccccacccacaaccttcgcc 13176592

>emb|AL731622.1|OSJN00265 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0093P23,
              complete sequence
          Length = 165683

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    ccccacccacaaccttcgcc 322
              ||||||||||||||||||||
Sbjct: 113030 ccccacccacaaccttcgcc 113049



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    ccccacccacaaccttcgcc 322
              ||||||||||||||||||||
Sbjct: 111729 ccccacccacaaccttcgcc 111748



 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 303    ccccacccacaaccttcgcc 322
              ||||||||||||||||||||
Sbjct: 108783 ccccacccacaaccttcgcc 108802

>gb|AC074030.17|AC074030 Homo sapiens 12 BAC RP11-425I22 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 163700

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 409    ttctactacagctcatccct 428
              ||||||||||||||||||||
Sbjct: 159311 ttctactacagctcatccct 159330

>gb|AC154197.1| Mus musculus BAC clone RP24-78I22 from chromosome 14, complete sequence
          Length = 201042

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 431   caaatgtgttttgtcccttgtgca 454
             |||| |||||||||||||||||||
Sbjct: 59768 caaaggtgttttgtcccttgtgca 59745

>emb|CR933839.10| Zebrafish DNA sequence from clone DKEY-244A7 in linkage group 18,
            complete sequence
          Length = 88900

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 213  gtaaatctcgccattgtgaa 232
            ||||||||||||||||||||
Sbjct: 4203 gtaaatctcgccattgtgaa 4222

>dbj|AK122556.1| Mus musculus mRNA for mKIAA1797 protein
          Length = 5988

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 380  tcatctgttgtccagacatg 399
            ||||||||||||||||||||
Sbjct: 3460 tcatctgttgtccagacatg 3441

>gb|AC140464.3| Mus musculus BAC clone RP24-383H6 from 12, complete sequence
          Length = 113482

 Score = 40.1 bits (20), Expect = 7.3
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 74     cccttcctcccacctcgcagcccc 97
              ||||||||||| ||||||||||||
Sbjct: 111680 cccttcctcccccctcgcagcccc 111703


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,883,246
Number of Sequences: 3902068
Number of extensions: 3883246
Number of successful extensions: 74601
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 37
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 74485
Number of HSP's gapped (non-prelim): 116
length of query: 540
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 517
effective length of database: 17,143,297,704
effective search space: 8863084912968
effective search space used: 8863084912968
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)