| Clone Name | baal32b19 |
|---|---|
| Clone Library Name | barley_pub |
>emb|AL355482.13| Human DNA sequence from clone RP11-538D16 on chromosome 1q25.1-31.3 Contains the gene for a protein similar to zinc finger protein 135 (clone pHZ-17) zinc finger protein 61 (LOC127665) and two novel genes (LOC149157), complete sequence Length = 74515 Score = 52.0 bits (26), Expect = 7e-04 Identities = 26/26 (100%) Strand = Plus / Plus Query: 78 aggagtccttcgtgacattgaggcct 103 |||||||||||||||||||||||||| Sbjct: 35850 aggagtccttcgtgacattgaggcct 35875
>gb|BT017400.1| Zea mays clone EL01N0328H09.c mRNA sequence Length = 1152 Score = 44.1 bits (22), Expect = 0.17 Identities = 28/30 (93%) Strand = Plus / Plus Query: 150 cggaggtggagaagaaggtgtgcctggtga 179 |||||||||||||||||||| | ||||||| Sbjct: 784 cggaggtggagaagaaggtgaggctggtga 813
>emb|AL390209.1| Human DNA sequence from clone CTA-437G10 on chromosome 22q11.2-12.3, complete sequence Length = 71200 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 ggaggtggagaagaaggtgtg 171 ||||||||||||||||||||| Sbjct: 21585 ggaggtggagaagaaggtgtg 21605
>dbj|AP007255.1| Magnetospirillum magneticum AMB-1 DNA, complete genome Length = 4967148 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Minus Query: 87 tcgtgacattgaggcctccgc 107 ||||||||||||||||||||| Sbjct: 266529 tcgtgacattgaggcctccgc 266509
>gb|AC004032.7| Homo sapiens Chromosome 22q11.2 BAC Clone b437g10 In BCRL2-GGT Region, complete sequence Length = 200685 Score = 42.1 bits (21), Expect = 0.66 Identities = 21/21 (100%) Strand = Plus / Plus Query: 151 ggaggtggagaagaaggtgtg 171 ||||||||||||||||||||| Sbjct: 21579 ggaggtggagaagaaggtgtg 21599
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cggaggtggagaagaaggtg 169 |||||||||||||||||||| Sbjct: 5855642 cggaggtggagaagaaggtg 5855623
>gb|AC146619.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNAa0021B21, from chromosome 3, complete sequence Length = 139208 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cggaggtggagaagaaggtg 169 |||||||||||||||||||| Sbjct: 84472 cggaggtggagaagaaggtg 84453
>ref|XM_500189.1| Yarrowia lipolytica CLIB122, YALI0A18139g.1 predicted mRNA Length = 2349 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 151 ggaggtggagaagaaggtgt 170 |||||||||||||||||||| Sbjct: 1815 ggaggtggagaagaaggtgt 1834
>gb|AC134517.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OJA1325D05, complete sequence Length = 136214 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gacggaggtggagaagaagg 167 |||||||||||||||||||| Sbjct: 108220 gacggaggtggagaagaagg 108239
>emb|AL137798.8| Human DNA sequence from clone RP5-1182A14 on chromosome 1 Contains the 5' end of a novel gene, a novel gene, a macrophage stimulating 1 (hepatocyte growth factor-like)(MST1) pseudogene and three CpG islands, complete sequence Length = 146141 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 120 gcggcgcccccgcgctgtcc 139 |||||||||||||||||||| Sbjct: 18757 gcggcgcccccgcgctgtcc 18776
>emb|AL021920.1|HS163M9 Human DNA sequence from clone RP1-163M9 on chromosome 1p35.1-36.21 Contains a novel pseudogene, a eukaryotic translation initiation factor 1A pseudogene 1 (EIF1AP1), part of a novel gene (LOC284729), a macrophage stimulating 1 (hepatocyte growth factor-like)(MST1) pseudogene and five CpG islands, complete sequence Length = 118067 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 120 gcggcgcccccgcgctgtcc 139 |||||||||||||||||||| Sbjct: 12410 gcggcgcccccgcgctgtcc 12391
>gb|AC005908.1| Homo sapiens 12p13.3 BAC RPCI11-476M19 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 196501 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cgcccctttcagcagcaacg 200 |||||||||||||||||||| Sbjct: 62617 cgcccctttcagcagcaacg 62598
>dbj|AK125333.1| Homo sapiens cDNA FLJ43343 fis, clone NT2RI3008055 Length = 5978 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 181 cgcccctttcagcagcaacg 200 |||||||||||||||||||| Sbjct: 2406 cgcccctttcagcagcaacg 2387
>gb|AC090482.3| Genomic sequence for Oryza sativa, Nipponbare strain, clone OSJNBa0015I18, from chromosome 10, complete sequence Length = 161479 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 148 gacggaggtggagaagaagg 167 |||||||||||||||||||| Sbjct: 129474 gacggaggtggagaagaagg 129455
>gb|AC134241.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0085F02, complete sequence Length = 128535 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cggaggtggagaagaaggtg 169 |||||||||||||||||||| Sbjct: 5264 cggaggtggagaagaaggtg 5245
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gacggaggtggagaagaagg 167 |||||||||||||||||||| Sbjct: 9236943 gacggaggtggagaagaagg 9236962
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 150 cggaggtggagaagaaggtg 169 |||||||||||||||||||| Sbjct: 5854855 cggaggtggagaagaaggtg 5854836
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 148 gacggaggtggagaagaagg 167 |||||||||||||||||||| Sbjct: 9242082 gacggaggtggagaagaagg 9242101
>emb|CR382127.1| Yarrowia lipolytica chromosome A of strain CLIB122 of Yarrowia lipolytica Length = 2303261 Score = 40.1 bits (20), Expect = 2.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 151 ggaggtggagaagaaggtgt 170 |||||||||||||||||||| Sbjct: 1885159 ggaggtggagaagaaggtgt 1885140 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 1,539,405 Number of Sequences: 3902068 Number of extensions: 1539405 Number of successful extensions: 109102 Number of sequences better than 10.0: 19 Number of HSP's better than 10.0 without gapping: 19 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 108737 Number of HSP's gapped (non-prelim): 365 length of query: 206 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 184 effective length of database: 17,147,199,772 effective search space: 3155084758048 effective search space used: 3155084758048 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)