ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal32b18
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_476545.1| Oryza sativa (japonica cultivar-group), mRNA 88 4e-14
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
3dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic D... 88 4e-14
4gb|AY113455.1| Drosophila melanogaster RE36155 full insert cDNA 48 0.037
5ref|NM_164830.3| Drosophila melanogaster Sema-1a CG18405-RA (Sem... 48 0.037
6gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, r... 48 0.037
7gb|AC008330.3|AC008330 Drosophila melanogaster, chromosome 2L, r... 48 0.037
8gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30... 48 0.037
9gb|AC069333.8| Homo sapiens BAC clone RP11-634D21 from 2, comple... 46 0.15
10gb|AY794670.1| Adenocline pauciflora tRNA-Leu (trnL) gene and tr... 44 0.58
11ref|XM_720487.1| Plasmodium yoelii yoelii str. 17XNL hypothetica... 44 0.58
12gb|AC156645.2| Mus musculus BAC clone RP23-59I22 from chromosome... 44 0.58
13gb|AC109782.7| Homo sapiens 3 BAC RP11-346M10 (Roswell Park Canc... 44 0.58
14gb|AC108714.3| Homo sapiens 3p BAC RP11-146G16 (Roswell Park Can... 44 0.58
15gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome 44 0.58
16emb|CR388067.9| Zebrafish DNA sequence from clone CH211-169K21 i... 42 2.3
17emb|AL353590.14| Human DNA sequence from clone RP11-420P23 on ch... 42 2.3
18gb|AC092952.4| Homo sapiens 3 BAC RP11-332P22 (Roswell Park Canc... 42 2.3
19gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 42 2.3
20gb|AC013751.6|AC013751 Homo sapiens chromosome , clone RP11-298P... 42 2.3
21emb|Z78415.1|CEC17G1 Caenorhabditis elegans Cosmid C17G1, comple... 42 2.3
22ref|XM_518324.1| PREDICTED: Pan troglodytes similar to t-complex... 40 9.0
23gb|AF222890.1| Trichophyton rubrum strain 97-12332 ribosomal DNA... 40 9.0
24gb|AF222887.1| Trichophyton rubrum strain NCPF 295 putative 25S ... 40 9.0
25gb|AC004646.1| Homo sapiens chromosome 16, cosmid clone 441H9 (L... 40 9.0
26gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome... 40 9.0
27gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, comp... 40 9.0
28gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, c... 40 9.0
29gb|AC120397.7| Mus musculus chromosome 18, clone RP24-332E21, co... 40 9.0
30gb|AC125379.4| Mus musculus BAC clone RP23-53B19 from chromosome... 40 9.0
31gb|AC132235.3| Mus musculus BAC clone RP24-497H15 from chromosom... 40 9.0
32ref|NM_152457.1| Homo sapiens zinc finger protein 597 (ZNF597), ... 40 9.0
33gb|AC115733.14| Mus musculus chromosome 16, clone RP23-466L17, c... 40 9.0
34gb|BC034573.1| Homo sapiens chromosome 6 open reading frame 12, ... 40 9.0
35gb|AF032109.2| Homo sapiens clone HTEX4 mRNA, complete sequence 40 9.0
36gb|AC108838.20| Mus musculus chromosome 18, clone RP23-326N14, c... 40 9.0
37ref|XM_673261.1| Plasmodium berghei strain ANKA hypothetical pro... 40 9.0
38emb|BX546468.1| Human DNA sequence from clone RP5-1111N9 on chro... 40 9.0
39emb|AL845439.5| Human DNA sequence from clone DAQB-215D11 on chr... 40 9.0
40emb|BX088647.3| Human DNA sequence from clone DASS-90B3 on chrom... 40 9.0
41emb|AL607077.4| Human DNA sequence from clone RP11-374I15 on chr... 40 9.0
42emb|AL671859.3| Human DNA sequence from clone XXbac-218N7 on chr... 40 9.0
43emb|AL669914.2| Human DNA sequence from clone XXbac-250I8 on chr... 40 9.0
44emb|AL354810.8| Human DNA sequence from clone RP11-527N12 on chr... 40 9.0
45gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence 40 9.0
46gb|AC063948.44| Homo sapiens 12 BAC RP11-321F8 (Roswell Park Can... 40 9.0
47gb|BC029899.1| Homo sapiens zinc finger protein 597, mRNA (cDNA ... 40 9.0
48emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segmen... 40 9.0
49emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, c... 40 9.0
50emb|AL080237.1|ATF3I3 Arabidopsis thaliana DNA chromosome 4, BAC... 40 9.0
51emb|AL031907.1|SPCC18 S.pombe chromosome III cosmid c18 40 9.0
52gb|AC025283.6| Homo sapiens chromosome 16 clone RP11-433P17, com... 40 9.0
53emb|BX927229.6| Human DNA sequence from clone DAMA-377D17 on chr... 40 9.0
54emb|CR352324.11| Zebrafish DNA sequence from clone CH211-218L14 ... 40 9.0
55emb|CR759960.3| Human DNA sequence from clone DAAP-65D20 on chro... 40 9.0
56emb|CR759763.2| Human DNA sequence from clone DAMC-182C13 on chr... 40 9.0
57dbj|AB210196.1| Pan troglodytes ZNRD1, PPP1R11, RNF genes for zi... 40 9.0
58dbj|AB202082.1| Homo sapiens ZNRD1, PPP1R11, RNF39 genes for zin... 40 9.0
59gb|AF512431.1| Saccharothrix mutabilis subsp. capreolus nonribos... 40 9.0
60dbj|AK057633.1| Homo sapiens cDNA FLJ33071 fis, clone TRACH20002... 40 9.0
61ref|XM_945157.1| PREDICTED: Homo sapiens chromosome 6 open readi... 40 9.0
62ref|XM_379403.3| PREDICTED: Homo sapiens chromosome 6 open readi... 40 9.0
63emb|CR388205.7| Human DNA sequence from clone DADB-60O11 on chro... 40 9.0
64gb|AC007434.8| Homo sapiens, clone RP11-17A8, complete sequence 40 9.0
65emb|BX649593.5| Zebrafish DNA sequence from clone CH211-12G4 in ... 40 9.0
66gb|AC148667.1| Macaca mulatta Major Histocompatibility Complex B... 40 9.0
67emb|BX901941.5| Mouse DNA sequence from clone RP23-344H22 on chr... 40 9.0
68dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
69dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
70emb|BX572076.4| Zebrafish DNA sequence from clone DKEY-69N5 in l... 40 9.0
71dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partia... 40 9.0
72gb|AF222889.1|AF222889 Trichophyton rubrum strain T2/2248 riboso... 40 9.0
73gb|BC112395.1| Homo sapiens chromosome 6 open reading frame 12, ... 40 9.0
74gb|AC090358.16| Homo sapiens chromosome 18, clone RP11-775G23, c... 40 9.0
75dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 40 9.0
76dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility co... 40 9.0
77dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
78dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
79dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic D... 40 9.0
80emb|AL808134.17| Mouse DNA sequence from clone RP23-135E1 on chr... 40 9.0
81gb|AC006441.13|AC006441 Homo sapiens chromosome 17, clone hRPC.5... 40 9.0
82emb|AL138976.5|CNS01DWY Human chromosome 14 DNA sequence BAC R-4... 40 9.0
83dbj|AP001485.5| Homo sapiens genomic DNA, chromosome 11 clone:RP... 40 9.0
84dbj|AP001930.4| Homo sapiens genomic DNA, chromosome 11q clone:R... 40 9.0
85dbj|AB088087.1| Homo sapiens HCGVII, HTEX4,HTEX6A, HCGV, HZFW1, ... 40 9.0
86gb|U53588.1|HSU53588 Homo sapiens MHC class 1 region 40 9.0
87gb|AC110160.10| Mus musculus chromosome 1, clone RP23-66A20, com... 40 9.0
88gb|AC004201.1|AC004201 Homo sapiens clone UWGC:y2c163 from 6p21,... 40 9.0
89gb|AC004199.1|AC004199 Homo sapiens clone UWGC:y2c201 from 6p21,... 40 9.0
90emb|CT010503.10| Mouse DNA sequence from clone RP23-461N23 on ch... 40 9.0
91emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9... 40 9.0
92dbj|AB023056.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA... 40 9.0 
>ref|XM_476545.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2319

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                       
Query: 209 cccgctccccggcgaggtgcctgcgtggttcatccgcggtctcctgccgccactcgccgt 268
           ||||||||| || ||| |||| |||||||||   ||||| |||| |||||| ||||||||
Sbjct: 345 cccgctcccgggggagatgccggcgtggttcgggcgcggcctcccgccgccgctcgccgt 404

                                                               
Query: 269 ggtcgagctccgctaggtcgcagtcaatggcacgctcccgcccaatctcggc 320
           | |||| |||||||  | ||| ||||||||||||||||||||| ||||||||
Sbjct: 405 gctcgacctccgctccgccgcggtcaatggcacgctcccgcccgatctcggc 456
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
               sequence
          Length = 29644043

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                           
Query: 209     cccgctccccggcgaggtgcctgcgtggttcatccgcggtctcctgccgccactcgccgt 268
               ||||||||| || ||| |||| |||||||||   ||||| |||| |||||| ||||||||
Sbjct: 1884053 cccgctcccgggggagatgccggcgtggttcgggcgcggcctcccgccgccgctcgccgt 1884112

                                                                   
Query: 269     ggtcgagctccgctaggtcgcagtcaatggcacgctcccgcccaatctcggc 320
               | |||| |||||||  | ||| ||||||||||||||||||||| ||||||||
Sbjct: 1884113 gctcgacctccgctccgccgcggtcaatggcacgctcccgcccgatctcggc 1884164
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>dbj|AP004338.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC
             clone:P0507H12
          Length = 143030

 Score = 87.7 bits (44), Expect = 4e-14
 Identities = 95/112 (84%)
 Strand = Plus / Plus

                                                                         
Query: 209   cccgctccccggcgaggtgcctgcgtggttcatccgcggtctcctgccgccactcgccgt 268
             ||||||||| || ||| |||| |||||||||   ||||| |||| |||||| ||||||||
Sbjct: 88632 cccgctcccgggggagatgccggcgtggttcgggcgcggcctcccgccgccgctcgccgt 88691

                                                                 
Query: 269   ggtcgagctccgctaggtcgcagtcaatggcacgctcccgcccaatctcggc 320
             | |||| |||||||  | ||| ||||||||||||||||||||| ||||||||
Sbjct: 88692 gctcgacctccgctccgccgcggtcaatggcacgctcccgcccgatctcggc 88743
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>gb|AY113455.1| Drosophila melanogaster RE36155 full insert cDNA
          Length = 4215

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 417 aaatttgttatatttactttatac 440
           ||||||||||||||||||||||||
Sbjct: 778 aaatttgttatatttactttatac 755
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>ref|NM_164830.3| Drosophila melanogaster Sema-1a CG18405-RA (Sema-1a), mRNA
          Length = 5310

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                   
Query: 417 aaatttgttatatttactttatac 440
           ||||||||||||||||||||||||
Sbjct: 778 aaatttgttatatttactttatac 755
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>gb|AC092234.1|AC092234 Drosophila melanogaster, chromosome 2L, region 29C-29D, BAC clone
              BACR02I15, complete sequence
          Length = 186490

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 417    aaatttgttatatttactttatac 440
              ||||||||||||||||||||||||
Sbjct: 167109 aaatttgttatatttactttatac 167086
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>gb|AC008330.3|AC008330 Drosophila melanogaster, chromosome 2L, region 29D-29E, BAC clone
             BACR23B08, complete sequence
          Length = 161927

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                     
Query: 417   aaatttgttatatttactttatac 440
             ||||||||||||||||||||||||
Sbjct: 79857 aaatttgttatatttactttatac 79834
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>gb|AE003621.3| Drosophila melanogaster chromosome 2L, section 30 of 83 of the complete
              sequence
          Length = 308031

 Score = 48.1 bits (24), Expect = 0.037
 Identities = 24/24 (100%)
 Strand = Plus / Minus

                                      
Query: 417    aaatttgttatatttactttatac 440
              ||||||||||||||||||||||||
Sbjct: 183271 aaatttgttatatttactttatac 183248
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>gb|AC069333.8| Homo sapiens BAC clone RP11-634D21 from 2, complete sequence
          Length = 87829

 Score = 46.1 bits (23), Expect = 0.15
 Identities = 26/27 (96%)
 Strand = Plus / Plus

                                        
Query: 17    gccacctccacacctcaaaccactggc 43
             |||||||||||||| ||||||||||||
Sbjct: 80872 gccacctccacaccccaaaccactggc 80898
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>gb|AY794670.1| Adenocline pauciflora tRNA-Leu (trnL) gene and trnL-trnF intergenic
           spacer, partial sequence; chloroplast
          Length = 752

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                 
Query: 429 tttactttatactttctggggt 450
           ||||||||||||||||||||||
Sbjct: 269 tttactttatactttctggggt 248
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>ref|XM_720487.1| Plasmodium yoelii yoelii str. 17XNL hypothetical protein (PY05161)
            partial mRNA
          Length = 3492

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 415  ataaatttgttatatttacttt 436
            ||||||||||||||||||||||
Sbjct: 3136 ataaatttgttatatttacttt 3115
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>gb|AC156645.2| Mus musculus BAC clone RP23-59I22 from chromosome 12, complete sequence
          Length = 247201

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 424    ttatatttactttatactttct 445
              ||||||||||||||||||||||
Sbjct: 119018 ttatatttactttatactttct 118997
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>gb|AC109782.7| Homo sapiens 3 BAC RP11-346M10 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 163591

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                   
Query: 425   tatatttactttatactttctg 446
             ||||||||||||||||||||||
Sbjct: 18124 tatatttactttatactttctg 18103
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>gb|AC108714.3| Homo sapiens 3p BAC RP11-146G16 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 151143

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 425    tatatttactttatactttctg 446
              ||||||||||||||||||||||
Sbjct: 121162 tatatttactttatactttctg 121141
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>gb|CP000230.1| Rhodospirillum rubrum ATCC 11170, complete genome
          Length = 4352825

 Score = 44.1 bits (22), Expect = 0.58
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 56      gcccgctggccgccgtcgccgc 77
               ||||||||||||||||||||||
Sbjct: 3245943 gcccgctggccgccgtcgccgc 3245964



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 58      ccgctggccgccgtcgccgc 77
               ||||||||||||||||||||
Sbjct: 3505912 ccgctggccgccgtcgccgc 3505931
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>emb|CR388067.9| Zebrafish DNA sequence from clone CH211-169K21 in linkage group 25,
              complete sequence
          Length = 163519

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 534    ataaaaattatatatgtgaaa 554
              |||||||||||||||||||||
Sbjct: 101948 ataaaaattatatatgtgaaa 101928
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>emb|AL353590.14| Human DNA sequence from clone RP11-420P23 on chromosome 9, complete
             sequence
          Length = 159927

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 419   atttgttatatttactttatacttt 443
             |||||||||||||| ||||||||||
Sbjct: 75218 atttgttatatttattttatacttt 75194
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>gb|AC092952.4| Homo sapiens 3 BAC RP11-332P22 (Roswell Park Cancer Institute Human BAC
             Library) complete sequence
          Length = 168234

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 530   agacataaaaattatatatgt 550
             |||||||||||||||||||||
Sbjct: 18220 agacataaaaattatatatgt 18240
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>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 208   gcccgctccccggcgaggtgc 228
             |||||||||||||||||||||
Sbjct: 72744 gcccgctccccggcgaggtgc 72724



 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 207    ggcccgctccccggcgaggt 226
              ||||||||||||||||||||
Sbjct: 768365 ggcccgctccccggcgaggt 768384
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>gb|AC013751.6|AC013751 Homo sapiens chromosome , clone RP11-298P6, complete sequence
          Length = 205816

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 527    aagagacataaaaattatata 547
              |||||||||||||||||||||
Sbjct: 157636 aagagacataaaaattatata 157616
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>emb|Z78415.1|CEC17G1 Caenorhabditis elegans Cosmid C17G1, complete sequence
          Length = 37990

 Score = 42.1 bits (21), Expect = 2.3
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 333   ctgactaggcttctcctcttc 353
             |||||||||||||||||||||
Sbjct: 25309 ctgactaggcttctcctcttc 25289
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>ref|XM_518324.1| PREDICTED: Pan troglodytes similar to t-complex testis-expressed 4,
           rat homologue (LOC462533), mRNA
          Length = 584

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 580 tcagaacaaaagattagagg 599
           ||||||||||||||||||||
Sbjct: 92  tcagaacaaaagattagagg 111
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>gb|AF222890.1| Trichophyton rubrum strain 97-12332 ribosomal DNA non-transcribed
           spacer region
          Length = 1538

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 66  cgccgtcgccgcatctctgc 85
           ||||||||||||||||||||
Sbjct: 588 cgccgtcgccgcatctctgc 607
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>gb|AF222887.1| Trichophyton rubrum strain NCPF 295 putative 25S ribosomal RNA and
            putative 18S ribosomal RNA genes, partial sequence
          Length = 2948

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 66   cgccgtcgccgcatctctgc 85
            ||||||||||||||||||||
Sbjct: 1517 cgccgtcgccgcatctctgc 1536
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>gb|AC004646.1| Homo sapiens chromosome 16, cosmid clone 441H9 (LANL), complete
             sequence
          Length = 36767

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   aatttgttatatttacttta 437
             ||||||||||||||||||||
Sbjct: 26862 aatttgttatatttacttta 26881
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>gb|AC165080.4| Mus musculus BAC clone RP24-93F20 from chromosome 9, complete sequence
          Length = 194427

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 532    acataaaaattatatatgtg 551
              ||||||||||||||||||||
Sbjct: 135447 acataaaaattatatatgtg 135466
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>gb|AC103376.7| Mus musculus chromosome 8, clone RP24-226P5, complete sequence
          Length = 165714

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 415    ataaatttgttatatttactttat 438
              ||||||||||| ||||||||||||
Sbjct: 132618 ataaatttgttttatttactttat 132595
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>gb|AC119822.38| Mus musculus chromosome 13, clone RP23-202P22, complete sequence
          Length = 213736

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 527   aagagacataaaaattatat 546
             ||||||||||||||||||||
Sbjct: 27826 aagagacataaaaattatat 27845
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>gb|AC120397.7| Mus musculus chromosome 18, clone RP24-332E21, complete sequence
          Length = 178502

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                             
Query: 407   tctatcgtataaatttgttatatttactttat 438
             ||||| ||||||||||| ||||||| ||||||
Sbjct: 19031 tctattgtataaatttgctatattttctttat 19062
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>gb|AC125379.4| Mus musculus BAC clone RP23-53B19 from chromosome 12, complete sequence
          Length = 225930

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 423    gttatatttactttatactt 442
              ||||||||||||||||||||
Sbjct: 211931 gttatatttactttatactt 211950
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>gb|AC132235.3| Mus musculus BAC clone RP24-497H15 from chromosome 17, complete
             sequence
          Length = 180462

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 5     ggattccccaaggccacctccaca 28
             ||||||||||||||||| ||||||
Sbjct: 47493 ggattccccaaggccacttccaca 47516
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>ref|NM_152457.1| Homo sapiens zinc finger protein 597 (ZNF597), mRNA
          Length = 1838

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 418  aatttgttatatttacttta 437
            ||||||||||||||||||||
Sbjct: 1476 aatttgttatatttacttta 1457
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>gb|AC115733.14| Mus musculus chromosome 16, clone RP23-466L17, complete sequence
          Length = 203973

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 10    ccccaaggccacctccacac 29
             ||||||||||||||||||||
Sbjct: 95053 ccccaaggccacctccacac 95034
to top
>gb|BC034573.1| Homo sapiens chromosome 6 open reading frame 12, mRNA (cDNA clone
           IMAGE:5167697), with apparent retained intron
          Length = 1243

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 580 tcagaacaaaagattagagg 599
           ||||||||||||||||||||
Sbjct: 95  tcagaacaaaagattagagg 114
to top
>gb|AF032109.2| Homo sapiens clone HTEX4 mRNA, complete sequence
          Length = 3653

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 580  tcagaacaaaagattagagg 599
            ||||||||||||||||||||
Sbjct: 2342 tcagaacaaaagattagagg 2361
to top
>gb|AC108838.20| Mus musculus chromosome 18, clone RP23-326N14, complete sequence
          Length = 173862

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 29/32 (90%)
 Strand = Plus / Plus

                                              
Query: 407    tctatcgtataaatttgttatatttactttat 438
              ||||| ||||||||||| ||||||| ||||||
Sbjct: 145318 tctattgtataaatttgctatattttctttat 145349
to top
>ref|XM_673261.1| Plasmodium berghei strain ANKA hypothetical protein (PB000162.02.0)
           partial mRNA
          Length = 3261

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                               
Query: 419 atttgttatatttactttat 438
           ||||||||||||||||||||
Sbjct: 687 atttgttatatttactttat 668
to top
>emb|BX546468.1| Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3,
             complete sequence
          Length = 61422

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 415   ataaatttgttatatttactttat 438
             |||||||||||||||||| |||||
Sbjct: 44615 ataaatttgttatatttattttat 44592
to top
>emb|AL845439.5| Human DNA sequence from clone DAQB-215D11 on chromosome 6 Contains 3'
             end of C6orf12 for chromosome 6 open reading frame 12,
             ETF1P1 for eukaryotic translation termination factor 1
             pseudogene 1, ZNRD1 for zinc ribbon domain containing, 1,
             PPP1R11 for protein phosphatase 1, regulatory (inhibitor)
             subunit 11, RNF39 for ring finger protein 39 and 3 CpG
             islands, complete sequence
          Length = 74764

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 33439 tcagaacaaaagattagagg 33420
to top
>emb|BX088647.3| Human DNA sequence from clone DASS-90B3 on chromosome 6, complete
             sequence
          Length = 100183

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 52261 tcagaacaaaagattagagg 52242
to top
>emb|AL607077.4| Human DNA sequence from clone RP11-374I15 on chromosome 6 Contains a
             pseudogene similar to part of acalsia, adrenocortical
             insufficiency, alacrimia (Allgrove, triple-A) (AAAS),
             complete sequence
          Length = 175466

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 528   agagacataaaaattatata 547
             ||||||||||||||||||||
Sbjct: 20403 agagacataaaaattatata 20384
to top
>emb|AL671859.3| Human DNA sequence from clone XXbac-218N7 on chromosome 6 contains the
             5' end of the gene for HTEX4, 4.3 and 6, a eukaryotic
             translation termination factor 1 (ETF1) pseudogene, the
             ZNRD1 gene for zinc ribbon domain containing 1, the
             PPP1R11 gene for protein phosphatase 1, regulatory
             (inhibitor) subunit 11, the HZFW1 gene for HZFW1 protein,
             the TRIM31, TRIM40 and TRIM10 genes for tripartite
             motif-containing 31,40 and 10 and four CpG islands,
             complete sequence
          Length = 144169

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 38241 tcagaacaaaagattagagg 38222
to top
>emb|AL669914.2| Human DNA sequence from clone XXbac-250I8 on chromosome 6 contains a
             major histocompatibility complex, class I, J pseudogene,
             the gene for HCGVIII protein, the genes for HTEX4, 4.3 and
             6, a eukaryotic translation termination factor 1 (ETF1)
             pseudogene, the ZNRD1 gene for zinc ribbon domain
             containing, 1 , the PPP1R11 gene for protein phosphatase
             1, regulatory (inhibitor) subunit 11, the HZFW1 gene for
             HZFW1 protein, the TRIM31 gene for tripartite motif
             containing 31, the TRIM40 gene for tripartite
             morif-containing 40, the TRIM10 gene for  tripartite motif
             containing 10, the 5' end of the TRIM15 gene for
             tripartite motif-containing 15 and five CpG islands,
             complete sequence
          Length = 159178

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 53271 tcagaacaaaagattagagg 53252
to top
>emb|AL354810.8| Human DNA sequence from clone RP11-527N12 on chromosome 13 Contains a
              novel gene, complete sequence
          Length = 178323

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 540    attatatatgtgaaactttt 559
              ||||||||||||||||||||
Sbjct: 103566 attatatatgtgaaactttt 103547
to top
>gb|AC091293.2| Takifugu rubripes clone 283N9, complete sequence
          Length = 147908

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 457   agtggcgattgtgcttttga 476
             ||||||||||||||||||||
Sbjct: 12044 agtggcgattgtgcttttga 12025
to top
>gb|AC063948.44| Homo sapiens 12 BAC RP11-321F8 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 146502

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 424    ttatatttactttatacttt 443
              ||||||||||||||||||||
Sbjct: 142989 ttatatttactttatacttt 142970
to top
>gb|BC029899.1| Homo sapiens zinc finger protein 597, mRNA (cDNA clone MGC:35280
            IMAGE:5175734), complete cds
          Length = 1838

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 418  aatttgttatatttacttta 437
            ||||||||||||||||||||
Sbjct: 1476 aatttgttatatttacttta 1457
to top
>emb|BX569694.1| Synechococcus sp. WH8102 complete genome; segment 6/7
          Length = 349122

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 488    acagcaatgacattcatatt 507
              ||||||||||||||||||||
Sbjct: 244174 acagcaatgacattcatatt 244193
to top
>emb|AL161491.2|ATCHRIV3 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 3
          Length = 196149

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 415   ataaatttgttatatttact 434
             ||||||||||||||||||||
Sbjct: 47868 ataaatttgttatatttact 47887
to top
>emb|AL080237.1|ATF3I3 Arabidopsis thaliana DNA chromosome 4, BAC clone F3I3, partial
            sequence (ESSA project)
          Length = 22145

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 415  ataaatttgttatatttact 434
            ||||||||||||||||||||
Sbjct: 6408 ataaatttgttatatttact 6427
to top
>emb|AL031907.1|SPCC18 S.pombe chromosome III cosmid c18
          Length = 40305

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   aaatttgttatatttacttt 436
             ||||||||||||||||||||
Sbjct: 19566 aaatttgttatatttacttt 19585
to top
>gb|AC025283.6| Homo sapiens chromosome 16 clone RP11-433P17, complete sequence
          Length = 179511

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 418    aatttgttatatttacttta 437
              ||||||||||||||||||||
Sbjct: 133976 aatttgttatatttacttta 133995
to top
>emb|BX927229.6| Human DNA sequence from clone DAMA-377D17 on chromosome 6, complete
             sequence
          Length = 112627

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 89923 tcagaacaaaagattagagg 89904
to top
>emb|CR352324.11| Zebrafish DNA sequence from clone CH211-218L14 in linkage group 12,
              complete sequence
          Length = 206894

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 537    aaaattatatatgtgaaact 556
              ||||||||||||||||||||
Sbjct: 144932 aaaattatatatgtgaaact 144913
to top
>emb|CR759960.3| Human DNA sequence from clone DAAP-65D20 on chromosome 6, complete
             sequence
          Length = 97107

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 55808 tcagaacaaaagattagagg 55789
to top
>emb|CR759763.2| Human DNA sequence from clone DAMC-182C13 on chromosome 6, complete
             sequence
          Length = 110503

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 78024 tcagaacaaaagattagagg 78005
to top
>dbj|AB210196.1| Pan troglodytes ZNRD1, PPP1R11, RNF genes for zinc ribbon domain
             containing, 1, protein phosphatase 1, regulatory
             (inhibitor) subunit 11 isoform 1, HZFw1 protein isoform 1,
             complete cds, HTEX4 gene, exon 1, 2, 3, 4, cell_line:
             Ericka
          Length = 46836

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 27217 tcagaacaaaagattagagg 27198
to top
>dbj|AB202082.1| Homo sapiens ZNRD1, PPP1R11, RNF39 genes for zinc ribbon domain
             containing, 1, protein phosphatase 1, regulatory
             (inhibitor) subunit 11, ring finger protein 39, complete
             cds
          Length = 45907

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 27267 tcagaacaaaagattagagg 27248
to top
>gb|AF512431.1| Saccharothrix mutabilis subsp. capreolus nonribosomal peptide
             synthetase gene cluster, partial sequence
          Length = 28890

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 249   ctcctgccgccactcgccgt 268
             ||||||||||||||||||||
Sbjct: 18760 ctcctgccgccactcgccgt 18741
to top
>dbj|AK057633.1| Homo sapiens cDNA FLJ33071 fis, clone TRACH2000237, weakly similar to
            ZINC FINGER PROTEIN 184
          Length = 1789

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 418  aatttgttatatttacttta 437
            ||||||||||||||||||||
Sbjct: 1488 aatttgttatatttacttta 1469
to top
>ref|XM_945157.1| PREDICTED: Homo sapiens chromosome 6 open reading frame 12,
           transcript variant 2 (C6orf12), mRNA
          Length = 11666

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 580 tcagaacaaaagattagagg 599
           ||||||||||||||||||||
Sbjct: 104 tcagaacaaaagattagagg 123
to top
>ref|XM_379403.3| PREDICTED: Homo sapiens chromosome 6 open reading frame 12,
            transcript variant 1 (C6orf12), mRNA
          Length = 8483

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 580  tcagaacaaaagattagagg 599
            ||||||||||||||||||||
Sbjct: 2336 tcagaacaaaagattagagg 2355
to top
>emb|CR388205.7| Human DNA sequence from clone DADB-60O11 on chromosome 6, complete
             sequence
          Length = 101470

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 85596 tcagaacaaaagattagagg 85577
to top
>gb|AC007434.8| Homo sapiens, clone RP11-17A8, complete sequence
          Length = 148359

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 540    attatatatgtgaaactttt 559
              ||||||||||||||||||||
Sbjct: 124399 attatatatgtgaaactttt 124380
to top
>emb|BX649593.5| Zebrafish DNA sequence from clone CH211-12G4 in linkage group 18,
             complete sequence
          Length = 71293

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 422   tgttatatttactttatact 441
             ||||||||||||||||||||
Sbjct: 58562 tgttatatttactttatact 58581
to top
>gb|AC148667.1| Macaca mulatta Major Histocompatibility Complex BAC MMU025A04, complete
             sequence
          Length = 218267

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 84800 tcagaacaaaagattagagg 84781
to top
>emb|BX901941.5| Mouse DNA sequence from clone RP23-344H22 on chromosome X, complete
             sequence
          Length = 138091

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 532   acataaaaattatatatgtg 551
             ||||||||||||||||||||
Sbjct: 58470 acataaaaattatatatgtg 58451
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
                sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                    
Query: 65       ccgccgtcgccgcatctctg 84
                ||||||||||||||||||||
Sbjct: 26599304 ccgccgtcgccgcatctctg 26599323
to top
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 420     tttgttatatttactttata 439
               ||||||||||||||||||||
Sbjct: 4217595 tttgttatatttactttata 4217614
to top
>emb|BX572076.4| Zebrafish DNA sequence from clone DKEY-69N5 in linkage group 12, complete
              sequence
          Length = 183510

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 537    aaaattatatatgtgaaact 556
              ||||||||||||||||||||
Sbjct: 156534 aaaattatatatgtgaaact 156515
to top
>dbj|AB128049.1| Macaca mulatta genes, MHC class I region, partial and complete cds
          Length = 3284914

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 580     tcagaacaaaagattagagg 599
               ||||||||||||||||||||
Sbjct: 2349111 tcagaacaaaagattagagg 2349130
to top
>gb|AF222889.1|AF222889 Trichophyton rubrum strain T2/2248 ribosomal DNA non-transcribed
           spacer region
          Length = 612

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 66  cgccgtcgccgcatctctgc 85
           ||||||||||||||||||||
Sbjct: 502 cgccgtcgccgcatctctgc 521
to top
>gb|BC112395.1| Homo sapiens chromosome 6 open reading frame 12, mRNA (cDNA clone
            MGC:133333 IMAGE:40054092), complete cds
          Length = 4334

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 580  tcagaacaaaagattagagg 599
            ||||||||||||||||||||
Sbjct: 1654 tcagaacaaaagattagagg 1673
to top
>gb|AC090358.16| Homo sapiens chromosome 18, clone RP11-775G23, complete sequence
          Length = 176680

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    aaatttgttatatttacttt 436
              ||||||||||||||||||||
Sbjct: 107981 aaatttgttatatttacttt 107962
to top
>dbj|BA000025.2| Homo sapiens genomic DNA, chromosome 6p21.3, HLA Class I region
          Length = 2229817

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 580     tcagaacaaaagattagagg 599
               ||||||||||||||||||||
Sbjct: 1883524 tcagaacaaaagattagagg 1883543
to top
>dbj|BA000041.2| Pan troglodytes DNA, major histocompatibility complex class I region
          Length = 1750601

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 580     tcagaacaaaagattagagg 599
               ||||||||||||||||||||
Sbjct: 1426676 tcagaacaaaagattagagg 1426695
to top
>dbj|AP003118.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
             clone:OJ1174_D05
          Length = 128525

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 420   tttgttatatttactttata 439
             ||||||||||||||||||||
Sbjct: 55562 tttgttatatttactttata 55581
to top
>dbj|AP003712.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
              clone:P0460H04
          Length = 166490

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 65     ccgccgtcgccgcatctctg 84
              ||||||||||||||||||||
Sbjct: 132957 ccgccgtcgccgcatctctg 132976
to top
>dbj|AP004803.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, PAC
             clone:P0677B10
          Length = 134423

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 65    ccgccgtcgccgcatctctg 84
             ||||||||||||||||||||
Sbjct: 15734 ccgccgtcgccgcatctctg 15753
to top
>emb|AL808134.17| Mouse DNA sequence from clone RP23-135E1 on chromosome X, complete
              sequence
          Length = 195763

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 532    acataaaaattatatatgtg 551
              ||||||||||||||||||||
Sbjct: 116142 acataaaaattatatatgtg 116123
to top
>gb|AC006441.13|AC006441 Homo sapiens chromosome 17, clone hRPC.56_K_13, complete sequence
          Length = 162996

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 572    ttcccacctcagaacaaaag 591
              ||||||||||||||||||||
Sbjct: 116981 ttcccacctcagaacaaaag 116962
to top
>emb|AL138976.5|CNS01DWY Human chromosome 14 DNA sequence BAC R-45P15 of library RPCI-11 from
             chromosome 14 of Homo sapiens (Human), complete sequence
          Length = 167357

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 527   aagagacataaaaattatat 546
             ||||||||||||||||||||
Sbjct: 82072 aagagacataaaaattatat 82091
to top
>dbj|AP001485.5| Homo sapiens genomic DNA, chromosome 11 clone:RP11-681H10, complete
              sequence
          Length = 158577

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 601    atatgatttgtctatgtata 620
              ||||||||||||||||||||
Sbjct: 129399 atatgatttgtctatgtata 129418
to top
>dbj|AP001930.4| Homo sapiens genomic DNA, chromosome 11q clone:RP11-669L23,
           complete sequences
          Length = 167117

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 601 atatgatttgtctatgtata 620
           ||||||||||||||||||||
Sbjct: 435 atatgatttgtctatgtata 454
to top
>dbj|AB088087.1| Homo sapiens HCGVII, HTEX4,HTEX6A, HCGV, HZFW1, HZFC2 genes
          Length = 45882

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 27243 tcagaacaaaagattagagg 27224
to top
>gb|U53588.1|HSU53588 Homo sapiens MHC class 1 region
          Length = 37160

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 20467 tcagaacaaaagattagagg 20486
to top
>gb|AC110160.10| Mus musculus chromosome 1, clone RP23-66A20, complete sequence
          Length = 179096

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    aaatttgttatatttacttt 436
              ||||||||||||||||||||
Sbjct: 141083 aaatttgttatatttacttt 141064
to top
>gb|AC004201.1|AC004201 Homo sapiens clone UWGC:y2c163 from 6p21, complete sequence
          Length = 43284

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 43220 tcagaacaaaagattagagg 43239
to top
>gb|AC004199.1|AC004199 Homo sapiens clone UWGC:y2c201 from 6p21, complete sequence
          Length = 40622

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 580 tcagaacaaaagattagagg 599
           ||||||||||||||||||||
Sbjct: 828 tcagaacaaaagattagagg 847
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>emb|CT010503.10| Mouse DNA sequence from clone RP23-461N23 on chromosome 13, complete
             sequence
          Length = 195702

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 527   aagagacataaaaattatat 546
             ||||||||||||||||||||
Sbjct: 55119 aagagacataaaaattatat 55100
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>emb|AL022574.7|HS1111N9 Human DNA sequence from clone RP5-1111N9 on chromosome Xq21.1-21.3,
             complete sequence
          Length = 148521

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 415   ataaatttgttatatttactttat 438
             |||||||||||||||||| |||||
Sbjct: 44615 ataaatttgttatatttattttat 44592
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>dbj|AB023056.1| Homo sapiens genomic DNA, chromosome 6p21.3, HLA class I region,
             clone:544A6, complete sequence
          Length = 162227

 Score = 40.1 bits (20), Expect = 9.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 580   tcagaacaaaagattagagg 599
             ||||||||||||||||||||
Sbjct: 11937 tcagaacaaaagattagagg 11956


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6,144,091
Number of Sequences: 3902068
Number of extensions: 6144091
Number of successful extensions: 143342
Number of sequences better than 10.0: 92
Number of HSP's better than 10.0 without gapping: 92
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 142730
Number of HSP's gapped (non-prelim): 612
length of query: 660
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 637
effective length of database: 17,143,297,704
effective search space: 10920280637448
effective search space used: 10920280637448
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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