ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal31l01
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_186999.2| Oryza sativa (japonica cultivar-group), mRNA 196 5e-47
2dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic D... 196 5e-47
3dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic D... 196 5e-47
4dbj|AK071269.1| Oryza sativa (japonica cultivar-group) cDNA clon... 196 5e-47
5gb|AY596584.1| Saccharum officinarum clone SCCCRZ1003F10, comple... 115 1e-22
6gb|AY107407.1| Zea mays PCO113924 mRNA sequence 115 1e-22
7ref|NM_189780.1| Oryza sativa (japonica cultivar-group), predic... 98 3e-17
8dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
9dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic D... 98 3e-17
10dbj|AK058479.1| Oryza sativa (japonica cultivar-group) cDNA clon... 98 3e-17
11gb|AY104945.1| Zea mays PCO113923 mRNA sequence 92 2e-15
12gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence 68 3e-08
13ref|XM_470575.1| Oryza sativa (japonica cultivar-group), predic... 62 2e-06
14gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 62 2e-06
15gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome... 62 2e-06
16dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 62 2e-06
17dbj|AK073045.1| Oryza sativa (japonica cultivar-group) cDNA clon... 62 2e-06
18gb|BT020521.1| Arabidopsis thaliana At5g55530 gene, complete cds 60 7e-06
19ref|NM_203207.1| Arabidopsis thaliana unknown protein AT5G55530 ... 60 7e-06
20ref|NM_124935.2| Arabidopsis thaliana unknown protein AT5G55530 ... 60 7e-06
21ref|NM_203206.1| Arabidopsis thaliana unknown protein AT5G55530 ... 60 7e-06
22emb|BX831223.1|CNS09ZIP Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
23emb|BX831182.1|CNS09ZEC Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
24emb|BX829589.1|CNS09YOH Arabidopsis thaliana Full-length cDNA Co... 60 7e-06
25gb|BT004310.1| Arabidopsis thaliana clone RAFL15-32-E21 (R50090)... 60 7e-06
26dbj|AB015479.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 60 7e-06
27gb|BT021091.1| Arabidopsis thaliana At5g55530 gene, complete cds 60 7e-06
28emb|BX832642.1|CNS09ZM1 Arabidopsis thaliana Full-length cDNA Co... 52 0.002
29gb|AE009055.1| Agrobacterium tumefaciens str. C58 circular chrom... 42 1.6
30ref|XM_824295.1| Trypanosoma brucei TREU927 hypothetical protein... 42 1.6
31gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 42 1.6
32emb|AL611950.17| Mouse DNA sequence from clone RP23-45A18 on chr... 42 1.6
33gb|AC152106.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A4, compl... 40 6.3
34gb|CP000148.1| Geobacter metallireducens GS-15, complete genome 40 6.3
35gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, com... 40 6.3
36gb|AC146111.3| Pan troglodytes BAC clone RP43-38O16 from 7, comp... 40 6.3
37gb|AC004990.1| Homo sapiens PAC clone RP5-1185I7 from 7, complet... 40 6.3
38gb|AC146561.22| Medicago truncatula clone mth2-12j18, complete s... 40 6.3
39emb|Y10293.1|SPSTTABCD Streptomyces spp. sttA, sttB, sttC, sttD ... 40 6.3
40emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromos... 40 6.3
41emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete ... 40 6.3
42gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare str... 40 6.3
43dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete ... 40 6.3
44dbj|AK105735.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
45dbj|AK102524.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 6.3
46gb|AF038563.1|AF038563 Homo sapiens membrane associated guanylat... 40 6.3
47ref|NM_012301.3| Homo sapiens membrane associated guanylate kina... 40 6.3
48dbj|AB014605.2| Homo sapiens mRNA for KIAA0705 protein, partial cds 40 6.3
49emb|CT573053.1| Medicago truncatula chromosome 5 clone mte1-8e5,... 40 6.3 
>ref|NM_186999.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 1689

 Score =  196 bits (99), Expect = 5e-47
 Identities = 126/135 (93%)
 Strand = Plus / Plus

                                                                        
Query: 327  tcaacttcgagcaggaggtgcaagtgaaccagaaggagatcatggacatgtacatgaaga 386
            ||||| |||||||||||||  | ||  |||||||||||||||||||||||||||||||||
Sbjct: 1204 tcaacctcgagcaggaggtcaaggtcgaccagaaggagatcatggacatgtacatgaaga 1263

                                                                        
Query: 387  gcatgcagcagttcacggagtcgctggccaagatgaagctcccgctggacctggacaatg 446
            |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct: 1264 gcatgcagcagttcacggagtccctcgccaagatgaagctcccgctggacctggacaacg 1323

                           
Query: 447  gcagcgacaagagcg 461
            |||||||||||||||
Sbjct: 1324 gcagcgacaagagcg 1338



 Score =  157 bits (79), Expect = 4e-35
 Identities = 134/151 (88%), Gaps = 6/151 (3%)
 Strand = Plus / Plus

                                                                        
Query: 4    cgccggcgtgcgagttgtgcagagcttctcgacggactacagcaccgccgactcctcggc 63
            |||||||||||| || ||||||||||||||||||||| ||||||||||||||||   |||
Sbjct: 887  cgccggcgtgcgcgtcgtgcagagcttctcgacggacaacagcaccgccgactc---ggc 943

                                                                        
Query: 64   cggcgccttccggagcgagacggcagtcagcagcgtgtccaccacggagtccccggccgc 123
            |||| ||||||||||||| ||  | ||||||||||||||||||||||||||||| |||||
Sbjct: 944  cggcaccttccggagcgacaccccggtcagcagcgtgtccaccacggagtcccccgccgc 1003

                                           
Query: 124  ggcc---gtcccggctaccccgcagtccaac 151
             |||   |||||||| |||||||||||||||
Sbjct: 1004 cgccgcggtcccggccaccccgcagtccaac 1034
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>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete
                sequence
          Length = 29644043

 Score =  196 bits (99), Expect = 5e-47
 Identities = 126/135 (93%)
 Strand = Plus / Plus

                                                                            
Query: 327      tcaacttcgagcaggaggtgcaagtgaaccagaaggagatcatggacatgtacatgaaga 386
                ||||| |||||||||||||  | ||  |||||||||||||||||||||||||||||||||
Sbjct: 23694600 tcaacctcgagcaggaggtcaaggtcgaccagaaggagatcatggacatgtacatgaaga 23694659

                                                                            
Query: 387      gcatgcagcagttcacggagtcgctggccaagatgaagctcccgctggacctggacaatg 446
                |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct: 23694660 gcatgcagcagttcacggagtccctcgccaagatgaagctcccgctggacctggacaacg 23694719

                               
Query: 447      gcagcgacaagagcg 461
                |||||||||||||||
Sbjct: 23694720 gcagcgacaagagcg 23694734



 Score =  157 bits (79), Expect = 4e-35
 Identities = 134/151 (88%), Gaps = 6/151 (3%)
 Strand = Plus / Plus

                                                                            
Query: 4        cgccggcgtgcgagttgtgcagagcttctcgacggactacagcaccgccgactcctcggc 63
                |||||||||||| || ||||||||||||||||||||| ||||||||||||||||   |||
Sbjct: 23694283 cgccggcgtgcgcgtcgtgcagagcttctcgacggacaacagcaccgccgactc---ggc 23694339

                                                                            
Query: 64       cggcgccttccggagcgagacggcagtcagcagcgtgtccaccacggagtccccggccgc 123
                |||| ||||||||||||| ||  | ||||||||||||||||||||||||||||| |||||
Sbjct: 23694340 cggcaccttccggagcgacaccccggtcagcagcgtgtccaccacggagtcccccgccgc 23694399

                                               
Query: 124      ggcc---gtcccggctaccccgcagtccaac 151
                 |||   |||||||| |||||||||||||||
Sbjct: 23694400 cgccgcggtcccggccaccccgcagtccaac 23694430
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>dbj|AP003803.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC
             clone:OJ1060_D03
          Length = 102178

 Score =  196 bits (99), Expect = 5e-47
 Identities = 126/135 (93%)
 Strand = Plus / Plus

                                                                         
Query: 327   tcaacttcgagcaggaggtgcaagtgaaccagaaggagatcatggacatgtacatgaaga 386
             ||||| |||||||||||||  | ||  |||||||||||||||||||||||||||||||||
Sbjct: 39214 tcaacctcgagcaggaggtcaaggtcgaccagaaggagatcatggacatgtacatgaaga 39273

                                                                         
Query: 387   gcatgcagcagttcacggagtcgctggccaagatgaagctcccgctggacctggacaatg 446
             |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct: 39274 gcatgcagcagttcacggagtccctcgccaagatgaagctcccgctggacctggacaacg 39333

                            
Query: 447   gcagcgacaagagcg 461
             |||||||||||||||
Sbjct: 39334 gcagcgacaagagcg 39348



 Score =  157 bits (79), Expect = 4e-35
 Identities = 134/151 (88%), Gaps = 6/151 (3%)
 Strand = Plus / Plus

                                                                         
Query: 4     cgccggcgtgcgagttgtgcagagcttctcgacggactacagcaccgccgactcctcggc 63
             |||||||||||| || ||||||||||||||||||||| ||||||||||||||||   |||
Sbjct: 38897 cgccggcgtgcgcgtcgtgcagagcttctcgacggacaacagcaccgccgactc---ggc 38953

                                                                         
Query: 64    cggcgccttccggagcgagacggcagtcagcagcgtgtccaccacggagtccccggccgc 123
             |||| ||||||||||||| ||  | ||||||||||||||||||||||||||||| |||||
Sbjct: 38954 cggcaccttccggagcgacaccccggtcagcagcgtgtccaccacggagtcccccgccgc 39013

                                            
Query: 124   ggcc---gtcccggctaccccgcagtccaac 151
              |||   |||||||| |||||||||||||||
Sbjct: 39014 cgccgcggtcccggccaccccgcagtccaac 39044
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>dbj|AK071269.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023088L08, full
            insert sequence
          Length = 1690

 Score =  196 bits (99), Expect = 5e-47
 Identities = 126/135 (93%)
 Strand = Plus / Plus

                                                                        
Query: 327  tcaacttcgagcaggaggtgcaagtgaaccagaaggagatcatggacatgtacatgaaga 386
            ||||| |||||||||||||  | ||  |||||||||||||||||||||||||||||||||
Sbjct: 1205 tcaacctcgagcaggaggtcaaggtcgaccagaaggagatcatggacatgtacatgaaga 1264

                                                                        
Query: 387  gcatgcagcagttcacggagtcgctggccaagatgaagctcccgctggacctggacaatg 446
            |||||||||||||||||||||| || |||||||||||||||||||||||||||||||| |
Sbjct: 1265 gcatgcagcagttcacggagtccctcgccaagatgaagctcccgctggacctggacaacg 1324

                           
Query: 447  gcagcgacaagagcg 461
            |||||||||||||||
Sbjct: 1325 gcagcgacaagagcg 1339



 Score =  157 bits (79), Expect = 4e-35
 Identities = 134/151 (88%), Gaps = 6/151 (3%)
 Strand = Plus / Plus

                                                                        
Query: 4    cgccggcgtgcgagttgtgcagagcttctcgacggactacagcaccgccgactcctcggc 63
            |||||||||||| || ||||||||||||||||||||| ||||||||||||||||   |||
Sbjct: 888  cgccggcgtgcgcgtcgtgcagagcttctcgacggacaacagcaccgccgactc---ggc 944

                                                                        
Query: 64   cggcgccttccggagcgagacggcagtcagcagcgtgtccaccacggagtccccggccgc 123
            |||| ||||||||||||| ||  | ||||||||||||||||||||||||||||| |||||
Sbjct: 945  cggcaccttccggagcgacaccccggtcagcagcgtgtccaccacggagtcccccgccgc 1004

                                           
Query: 124  ggcc---gtcccggctaccccgcagtccaac 151
             |||   |||||||| |||||||||||||||
Sbjct: 1005 cgccgcggtcccggccaccccgcagtccaac 1035
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>gb|AY596584.1| Saccharum officinarum clone SCCCRZ1003F10, complete sequence
          Length = 2010

 Score =  115 bits (58), Expect = 1e-22
 Identities = 131/154 (85%), Gaps = 6/154 (3%)
 Strand = Plus / Minus

                                                                       
Query: 1   cgacgccggcgtgcgagttgtgcagagcttctcgacggactacagcaccgccgactcctc 60
           |||||||||||||||  | ||| ||| |||||| |||||| ||||||||||||||||   
Sbjct: 905 cgacgccggcgtgcgcctcgtggagaccttctccacggacaacagcaccgccgactc--- 849

                                                                       
Query: 61  ggccggcgccttccggagcgagacggcagtcagcagcgtgtccaccacggagtccc---c 117
           ||  ||||||||||||||||| ||| | ||||||||||||||||||||||||||||   |
Sbjct: 848 ggtgggcgccttccggagcgacacgccggtcagcagcgtgtccaccacggagtcccccgc 789

                                             
Query: 118 ggccgcggccgtcccggctaccccgcagtccaac 151
            ||||||||  ||||||| ||||| |||||||||
Sbjct: 788 cgccgcggcgttcccggccacccctcagtccaac 755



 Score =  111 bits (56), Expect = 2e-21
 Identities = 166/203 (81%), Gaps = 6/203 (2%)
 Strand = Plus / Minus

                                                                       
Query: 224 gcggaggtcgattcgtctcacaccgttcaggagagcccggcggtgaactcacccagcact 283
           ||||||||||| ||||| | |||||| ||||||  |||||||| |||||| ||| || | 
Sbjct: 679 gcggaggtcgactcgtcccgcaccgtccaggaggtcccggcggcgaactcgcccggcgcc 620

                                                                       
Query: 284 gtgtctgagaacgcggtggacaaacctccgccggcgatgagcttcaacttcgagcaggag 343
           | ||| |||  ||| ||||||||      ||||| ||| ||| ||||| |||||||||||
Sbjct: 619 gcgtcggaggccgccgtggacaa------gccggtgatcagcgtcaacatcgagcaggag 566

                                                                       
Query: 344 gtgcaagtgaaccagaaggagatcatggacatgtacatgaagagcatgcagcagttcacg 403
           ||| | ||| ||  |||  |||||||||||||||||||||||||||||||||| ||||||
Sbjct: 565 gtgaaggtggacgggaaccagatcatggacatgtacatgaagagcatgcagcaattcacg 506

                                  
Query: 404 gagtcgctggccaagatgaagct 426
           || || |||||||| ||||||||
Sbjct: 505 gattccctggccaaaatgaagct 483
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>gb|AY107407.1| Zea mays PCO113924 mRNA sequence
          Length = 773

 Score =  115 bits (58), Expect = 1e-22
 Identities = 131/154 (85%), Gaps = 6/154 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   cgacgccggcgtgcgagttgtgcagagcttctcgacggactacagcaccgccgactcctc 60
           |||||||||||||||  | ||| ||||||||||||||||| ||||||||||||||||   
Sbjct: 471 cgacgccggcgtgcgcctcgtggagagcttctcgacggacaacagcaccgccgactc--- 527

                                                                       
Query: 61  ggccggcgccttccggagcgagacggcagtcagcagcgtgtccaccacggagtccc---c 117
           ||   || ||||||||||||| ||| | ||||||||||||||||||||||||||||   |
Sbjct: 528 ggtgagcaccttccggagcgacacgccggtcagcagcgtgtccaccacggagtcccccgc 587

                                             
Query: 118 ggccgcggccgtcccggctaccccgcagtccaac 151
            ||||||||  ||||||| ||||| |||||||||
Sbjct: 588 tgccgcggcgttcccggccacccctcagtccaac 621
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>ref|NM_189780.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1191

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                        
Query: 363  agatcatggacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatga 422
            |||||||||| ||||||||||||||||||||||||||||| || |||||| |||||||||
Sbjct: 1001 agatcatggagatgtacatgaagagcatgcagcagttcaccgaatcgctgtccaagatga 1060

                         
Query: 423  agctcccgctgga 435
            |||| ||| ||||
Sbjct: 1061 agctgccgatgga 1073
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
                sequence
          Length = 43261740

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                            
Query: 363      agatcatggacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatga 422
                |||||||||| ||||||||||||||||||||||||||||| || |||||| |||||||||
Sbjct: 41993849 agatcatggagatgtacatgaagagcatgcagcagttcaccgaatcgctgtccaagatga 41993790

                             
Query: 423      agctcccgctgga 435
                |||| ||| ||||
Sbjct: 41993789 agctgccgatgga 41993777
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>dbj|AP003683.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
             clone:P0431G06
          Length = 140466

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Minus

                                                                         
Query: 363   agatcatggacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatga 422
             |||||||||| ||||||||||||||||||||||||||||| || |||||| |||||||||
Sbjct: 95926 agatcatggagatgtacatgaagagcatgcagcagttcaccgaatcgctgtccaagatga 95867

                          
Query: 423   agctcccgctgga 435
             |||| ||| ||||
Sbjct: 95866 agctgccgatgga 95854
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>dbj|AK058479.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-016-C08, full
            insert sequence
          Length = 1686

 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 67/73 (91%)
 Strand = Plus / Plus

                                                                        
Query: 363  agatcatggacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatga 422
            |||||||||| ||||||||||||||||||||||||||||| || |||||| |||||||||
Sbjct: 1097 agatcatggagatgtacatgaagagcatgcagcagttcaccgaatcgctgtccaagatga 1156

                         
Query: 423  agctcccgctgga 435
            |||| ||| ||||
Sbjct: 1157 agctgccgatgga 1169
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>gb|AY104945.1| Zea mays PCO113923 mRNA sequence
          Length = 1032

 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 97/114 (85%)
 Strand = Plus / Plus

                                                                       
Query: 313 gccggcgatgagcttcaacttcgagcaggaggtgcaagtgaaccagaaggagatcatgga 372
           ||||| ||| ||| ||||| |||||||||||||| | ||| ||  |||  | ||||||||
Sbjct: 445 gccggtgatcagcgtcaacatcgagcaggaggtgaaggtggacgggaaccaaatcatgga 504

                                                                 
Query: 373 catgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagct 426
           ||||||||||||||| |||||||| |||||||| || |||||||| ||||||||
Sbjct: 505 catgtacatgaagagtatgcagcaattcacggattccctggccaaaatgaagct 558



 Score = 91.7 bits (46), Expect = 2e-15
 Identities = 84/96 (87%), Gaps = 3/96 (3%)
 Strand = Plus / Plus

                                                                       
Query: 26  agcttctcgacggactacagcaccgccgactcctcggccggcgccttccggagcgagacg 85
           ||||||||||||||| ||||||||||||||||   ||  |||||||||| |||||| |||
Sbjct: 179 agcttctcgacggacaacagcaccgccgactc---ggtgggcgccttccagagcgacacg 235

                                               
Query: 86  gcagtcagcagcgtgtccaccacggagtccccggcc 121
            | |||||||||||||| |||||||||| |||||||
Sbjct: 236 ccggtcagcagcgtgtctaccacggagttcccggcc 271
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>gb|AC157319.2| Zea mays clone ZMMBBb-136E2, complete sequence
          Length = 138186

 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 46/50 (92%)
 Strand = Plus / Plus

                                                               
Query: 374   atgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaa 423
             |||| |||||||||||||| ||||||||  ||||||||||||||||||||
Sbjct: 27559 atgtgcatgaagagcatgcggcagttcaacgagtcgctggccaagatgaa 27608
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>ref|XM_470575.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1209

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                   
Query: 372  acatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagct 426
            |||||||||||||||||||||||||||| || || || || || |||||||||||
Sbjct: 1034 acatgtacatgaagagcatgcagcagtttactgaatcccttgcaaagatgaagct 1088
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                      
Query: 372     acatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagct 426
               |||||||||||||||||||||||||||| || || || || || |||||||||||
Sbjct: 4863180 acatgtacatgaagagcatgcagcagtttactgaatcccttgcaaagatgaagct 4863126



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 210     acgcggcggacgcggcggag 229
               ||||||||||||||||||||
Sbjct: 1386863 acgcggcggacgcggcggag 1386882
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>gb|AC105731.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBa0064E16,
              complete sequence
          Length = 159092

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                     
Query: 372    acatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagct 426
              |||||||||||||||||||||||||||| || || || || || |||||||||||
Sbjct: 132367 acatgtacatgaagagcatgcagcagtttactgaatcccttgcaaagatgaagct 132421
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
               sequence
          Length = 36192742

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Minus

                                                                      
Query: 372     acatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagct 426
               |||||||||||||||||||||||||||| || || || || || |||||||||||
Sbjct: 4862395 acatgtacatgaagagcatgcagcagtttactgaatcccttgcaaagatgaagct 4862341



 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 210     acgcggcggacgcggcggag 229
               ||||||||||||||||||||
Sbjct: 1386861 acgcggcggacgcggcggag 1386880
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>dbj|AK073045.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033007C02, full
            insert sequence
          Length = 1557

 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 49/55 (89%)
 Strand = Plus / Plus

                                                                   
Query: 372  acatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagct 426
            |||||||||||||||||||||||||||| || || || || || |||||||||||
Sbjct: 1197 acatgtacatgaagagcatgcagcagtttactgaatcccttgcaaagatgaagct 1251
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>gb|BT020521.1| Arabidopsis thaliana At5g55530 gene, complete cds
          Length = 1218

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 371  gacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagctcccg 430
            |||||||||||||| |||||||| ||||| || || || ||||| ||||||||||| || 
Sbjct: 1042 gacatgtacatgaaaagcatgcaacagtttacagattcactggctaagatgaagcttcct 1101

                  
Query: 431  ctggac 436
            ||||||
Sbjct: 1102 ctggac 1107
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>ref|NM_203207.1| Arabidopsis thaliana unknown protein AT5G55530 transcript variant
            AT5G55530.3 mRNA, complete cds
          Length = 1634

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 371  gacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagctcccg 430
            |||||||||||||| |||||||| ||||| || || || ||||| ||||||||||| || 
Sbjct: 1158 gacatgtacatgaaaagcatgcaacagtttacagattcactggctaagatgaagcttcct 1217

                  
Query: 431  ctggac 436
            ||||||
Sbjct: 1218 ctggac 1223
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>ref|NM_124935.2| Arabidopsis thaliana unknown protein AT5G55530 transcript variant
            AT5G55530.1 mRNA, complete cds
          Length = 1740

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 371  gacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagctcccg 430
            |||||||||||||| |||||||| ||||| || || || ||||| ||||||||||| || 
Sbjct: 1264 gacatgtacatgaaaagcatgcaacagtttacagattcactggctaagatgaagcttcct 1323

                  
Query: 431  ctggac 436
            ||||||
Sbjct: 1324 ctggac 1329
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>ref|NM_203206.1| Arabidopsis thaliana unknown protein AT5G55530 transcript variant
            AT5G55530.2 mRNA, complete cds
          Length = 1662

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 371  gacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagctcccg 430
            |||||||||||||| |||||||| ||||| || || || ||||| ||||||||||| || 
Sbjct: 1186 gacatgtacatgaaaagcatgcaacagtttacagattcactggctaagatgaagcttcct 1245

                  
Query: 431  ctggac 436
            ||||||
Sbjct: 1246 ctggac 1251
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>emb|BX831223.1|CNS09ZIP Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS69ZG07 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1460

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 371  gacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagctcccg 430
            |||||||||||||| |||||||| ||||| || || || ||||| ||||||||||| || 
Sbjct: 1180 gacatgtacatgaaaagcatgcaacagtttacagattcactggctaagatgaagcttcct 1239

                  
Query: 431  ctggac 436
            ||||||
Sbjct: 1240 ctggac 1245
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>emb|BX831182.1|CNS09ZEC Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTLS66ZE10 of Adult vegetative tissue of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1467

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 371  gacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagctcccg 430
            |||||||||||||| |||||||| ||||| || || || ||||| ||||||||||| || 
Sbjct: 1158 gacatgtacatgaaaagcatgcaacagtttacagattcactggctaagatgaagcttcct 1217

                  
Query: 431  ctggac 436
            ||||||
Sbjct: 1218 ctggac 1223
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>emb|BX829589.1|CNS09YOH Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTFB23ZA09 of Flowers and buds of strain col-0 of
            Arabidopsis thaliana (thale cress)
          Length = 1525

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 371  gacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagctcccg 430
            |||||||||||||| |||||||| ||||| || || || ||||| ||||||||||| || 
Sbjct: 1186 gacatgtacatgaaaagcatgcaacagtttacagattcactggctaagatgaagcttcct 1245

                  
Query: 431  ctggac 436
            ||||||
Sbjct: 1246 ctggac 1251
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>gb|BT004310.1| Arabidopsis thaliana clone RAFL15-32-E21 (R50090) unknown protein
            (At5g55530) mRNA, complete cds
          Length = 1610

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 371  gacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagctcccg 430
            |||||||||||||| |||||||| ||||| || || || ||||| ||||||||||| || 
Sbjct: 1249 gacatgtacatgaaaagcatgcaacagtttacagattcactggctaagatgaagcttcct 1308

                  
Query: 431  ctggac 436
            ||||||
Sbjct: 1309 ctggac 1314
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>dbj|AB015479.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MTE17
          Length = 80675

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                         
Query: 371   gacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagctcccg 430
             |||||||||||||| |||||||| ||||| || || || ||||| ||||||||||| || 
Sbjct: 71279 gacatgtacatgaaaagcatgcaacagtttacagattcactggctaagatgaagcttcct 71338

                   
Query: 431   ctggac 436
             ||||||
Sbjct: 71339 ctggac 71344
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>gb|BT021091.1| Arabidopsis thaliana At5g55530 gene, complete cds
          Length = 1270

 Score = 60.0 bits (30), Expect = 7e-06
 Identities = 57/66 (86%)
 Strand = Plus / Plus

                                                                        
Query: 371  gacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagctcccg 430
            |||||||||||||| |||||||| ||||| || || || ||||| ||||||||||| || 
Sbjct: 1051 gacatgtacatgaaaagcatgcaacagtttacagattcactggctaagatgaagcttcct 1110

                  
Query: 431  ctggac 436
            ||||||
Sbjct: 1111 ctggac 1116
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>emb|BX832642.1|CNS09ZM1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
            GSLTPGH86ZD08 of Hormone Treated Callus of strain col-0
            of Arabidopsis thaliana (thale cress)
          Length = 1470

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 56/66 (84%)
 Strand = Plus / Plus

                                                                        
Query: 371  gacatgtacatgaagagcatgcagcagttcacggagtcgctggccaagatgaagctcccg 430
            |||||||||||||| |||||||| ||||| || || |  ||||| ||||||||||| || 
Sbjct: 1172 gacatgtacatgaaaagcatgcaacagtttacagattaactggctaagatgaagcttcct 1231

                  
Query: 431  ctggac 436
            ||||||
Sbjct: 1232 ctggac 1237
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>gb|AE009055.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 81 of
            256 of the complete sequence
          Length = 9936

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 217  ggacgcggcggaggtcgattc 237
            |||||||||||||||||||||
Sbjct: 4588 ggacgcggcggaggtcgattc 4608
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>ref|XM_824295.1| Trypanosoma brucei TREU927 hypothetical protein (Tb11.01.4890)
           partial mRNA
          Length = 909

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                
Query: 446 ggcagcgacaagagcgggagc 466
           |||||||||||||||||||||
Sbjct: 754 ggcagcgacaagagcgggagc 774
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>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 217    ggacgcggcggaggtcgattc 237
              |||||||||||||||||||||
Sbjct: 890098 ggacgcggcggaggtcgattc 890118
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>emb|AL611950.17| Mouse DNA sequence from clone RP23-45A18 on chromosome 4, complete
             sequence
          Length = 161331

 Score = 42.1 bits (21), Expect = 1.6
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 179   tcctcagcaggccagaaggag 199
             |||||||||||||||||||||
Sbjct: 46300 tcctcagcaggccagaaggag 46320
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>gb|AC152106.2| Ostreococcus sp. CCE9901 clone JGIACFB-9A4, complete sequence
          Length = 34754

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 209   gacgcggcggacgcggcgga 228
             ||||||||||||||||||||
Sbjct: 25105 gacgcggcggacgcggcgga 25086
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>gb|CP000148.1| Geobacter metallireducens GS-15, complete genome
          Length = 3997420

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 52      cgactcctcggccggcgcct 71
               ||||||||||||||||||||
Sbjct: 3522955 cgactcctcggccggcgcct 3522974
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>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence
          Length = 4126292

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 209     gacgcggcggacgcggcgga 228
               ||||||||||||||||||||
Sbjct: 3117742 gacgcggcggacgcggcgga 3117723
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>gb|AC146111.3| Pan troglodytes BAC clone RP43-38O16 from 7, complete sequence
          Length = 158242

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 207   cagacgcggcggacgcggcg 226
             ||||||||||||||||||||
Sbjct: 19952 cagacgcggcggacgcggcg 19971
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>gb|AC004990.1| Homo sapiens PAC clone RP5-1185I7 from 7, complete sequence
          Length = 154405

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 207    cagacgcggcggacgcggcg 226
              ||||||||||||||||||||
Sbjct: 123115 cagacgcggcggacgcggcg 123096
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>gb|AC146561.22| Medicago truncatula clone mth2-12j18, complete sequence
          Length = 135940

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 357   agaaggagatcatggacatg 376
             ||||||||||||||||||||
Sbjct: 23715 agaaggagatcatggacatg 23734
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>emb|Y10293.1|SPSTTABCD Streptomyces spp. sttA, sttB, sttC, sttD and sttR genes
          Length = 5213

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 209  gacgcggcggacgcggcgga 228
            ||||||||||||||||||||
Sbjct: 2694 gacgcggcggacgcggcgga 2713
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>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence
          Length = 4074542

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 209     gacgcggcggacgcggcgga 228
               ||||||||||||||||||||
Sbjct: 2847823 gacgcggcggacgcggcgga 2847804
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>emb|AL939112.1|SCO939112 Streptomyces coelicolor A3(2) complete genome; segment 9/29
          Length = 300800

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 213    cggcggacgcggcggaggtc 232
              ||||||||||||||||||||
Sbjct: 208319 cggcggacgcggcggaggtc 208338
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>gb|AC119747.1| Genomic sequence for Oryza sativa, Nipponbare strain, clone OJ1293G11,
             from chromosome 3, complete sequence
          Length = 147806

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 210   acgcggcggacgcggcggag 229
             ||||||||||||||||||||
Sbjct: 48366 acgcggcggacgcggcggag 48385
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>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome
          Length = 9105828

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 212    gcggcggacgcggcggaggt 231
              ||||||||||||||||||||
Sbjct: 560774 gcggcggacgcggcggaggt 560755
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>dbj|AK105735.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-201-H11, full
           insert sequence
          Length = 2291

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 210 acgcggcggacgcggcggag 229
           ||||||||||||||||||||
Sbjct: 666 acgcggcggacgcggcggag 685
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>dbj|AK102524.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033096A14, full
            insert sequence
          Length = 2725

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 210  acgcggcggacgcggcggag 229
            ||||||||||||||||||||
Sbjct: 1115 acgcggcggacgcggcggag 1134
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>gb|AF038563.1|AF038563 Homo sapiens membrane associated guanylate kinase 2 (MAGI-2) mRNA,
            complete cds
          Length = 4929

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  cagacgcggcggacgcggcg 226
            ||||||||||||||||||||
Sbjct: 4318 cagacgcggcggacgcggcg 4337
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>ref|NM_012301.3| Homo sapiens membrane associated guanylate kinase, WW and PDZ domain
            containing 2 (MAGI2), mRNA
          Length = 6880

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  cagacgcggcggacgcggcg 226
            ||||||||||||||||||||
Sbjct: 4318 cagacgcggcggacgcggcg 4337
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>dbj|AB014605.2| Homo sapiens mRNA for KIAA0705 protein, partial cds
          Length = 6795

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 207  cagacgcggcggacgcggcg 226
            ||||||||||||||||||||
Sbjct: 4257 cagacgcggcggacgcggcg 4276
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>emb|CT573053.1| Medicago truncatula chromosome 5 clone mte1-8e5, COMPLETE SEQUENCE
          Length = 106640

 Score = 40.1 bits (20), Expect = 6.3
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 357   agaaggagatcatggacatg 376
             ||||||||||||||||||||
Sbjct: 43913 agaaggagatcatggacatg 43894


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,120,035
Number of Sequences: 3902068
Number of extensions: 3120035
Number of successful extensions: 62894
Number of sequences better than 10.0: 49
Number of HSP's better than 10.0 without gapping: 49
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 62379
Number of HSP's gapped (non-prelim): 499
length of query: 469
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 447
effective length of database: 17,147,199,772
effective search space: 7664798298084
effective search space used: 7664798298084
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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