ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal31j19
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|NM_188271.1| Oryza sativa (japonica cultivar-group), predic... 345 9e-92
2dbj|AK070748.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 9e-92
3dbj|AK068509.1| Oryza sativa (japonica cultivar-group) cDNA clon... 345 9e-92
4dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic D... 283 3e-73
5dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic D... 283 3e-73
6dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
7dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic D... 74 5e-10
8ref|NM_121203.2| Arabidopsis thaliana catalytic/ hydrolase AT5G1... 48 0.031
9emb|BX831480.1|CNS09ZGU Arabidopsis thaliana Full-length cDNA Co... 48 0.031
10emb|BX831759.1|CNS09YN1 Arabidopsis thaliana Full-length cDNA Co... 48 0.031
11emb|BX830277.1|CNS09YO7 Arabidopsis thaliana Full-length cDNA Co... 48 0.031
12gb|AY085467.1| Arabidopsis thaliana clone 15284 mRNA, complete s... 48 0.031
13gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete se... 46 0.12
14emb|AL163814.1|ATT22P22 Arabidopsis thaliana DNA chromosome 5, B... 46 0.12
15gb|AE009080.1| Agrobacterium tumefaciens str. C58 circular chrom... 44 0.48
16emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete ... 44 0.48
17emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genom... 44 0.48
18gb|AE012028.1| Xanthomonas axonopodis pv. citri str. 306, secti... 44 0.48
19gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome 44 0.48
20dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
21dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome 44 0.48
22dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic D... 44 0.48
23dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome 44 0.48
24gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete ... 42 1.9
25emb|BX119979.9| Zebrafish DNA sequence from clone CH211-201G8 in... 42 1.9
26dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, co... 42 1.9
27dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome 42 1.9
28emb|BX511083.17| Zebrafish DNA sequence from clone CH211-195F22 ... 42 1.9
29gb|U60417.1|SPU60417 Streptomyces pristinaespiralis 4-dimethylam... 42 1.9
30gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome 40 7.5
31ref|XM_493741.2| Oryza sativa (japonica cultivar-group), mRNA 40 7.5
32gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome 40 7.5
33gb|AY658256.1| Synthetic construct Peudomonas aeruginosa clone F... 40 7.5
34gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 7.5
35gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 7.5
36gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome 40 7.5
37gb|AC144563.15| Medicago truncatula clone mth2-5c24, complete se... 40 7.5
38gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome 40 7.5
39emb|AL645607.9| Mouse DNA sequence from clone RP23-298N21 on chr... 40 7.5
40gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome 40 7.5
41dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009 40 7.5
42gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, comple... 40 7.5
43dbj|AK044942.1| Mus musculus 9.5 days embryo parthenogenote cDNA... 40 7.5
44dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
45emb|BX832067.1|CNS0A1XI Arabidopsis thaliana Full-length cDNA Co... 40 7.5
46gb|AE004785.1| Pseudomonas aeruginosa PAO1, section 346 of 529 o... 40 7.5
47dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete g... 40 7.5
48dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.5
49dbj|AK071423.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.5
50emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,comp... 40 7.5
51dbj|AB010087.1| Pseudomonas aeruginosa rpsB, tsf, pyrH, frr gene... 40 7.5 
>ref|NM_188271.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1188

 Score =  345 bits (174), Expect = 9e-92
 Identities = 375/442 (84%)
 Strand = Plus / Plus

                                                                        
Query: 99   actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatccgatagt 158
            ||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| || ||
Sbjct: 708  actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcccattgt 767

                                                                        
Query: 159  cggggcagtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaa 218
             ||||| ||||| || |||||||||||| | ||||| ||||| || ||||||||||| ||
Sbjct: 768  aggggctgtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaa 827

                                                                        
Query: 219  caagcggggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgaccc 278
            |||| | ||||||||||||||||||||||| || || |||||||| |||||||| || ||
Sbjct: 828  caagagaggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatcc 887

                                                                        
Query: 279  gctggtctacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctc 338
            |||||| ||||| ||||||||||| || || || ||||| || ||||| |||||||||||
Sbjct: 888  gctggtttacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctc 947

                                                                        
Query: 339  ctacctgctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggc 398
            |||||||||||||||| |||||||||| || ||||| ||  ||||||| || || || ||
Sbjct: 948  ctacctgctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgc 1007

                                                                        
Query: 399  ggaccgggtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggca 458
             ||||||||||| ||||| ||||| || ||||| |||||||  |||||  | ||||||||
Sbjct: 1008 agaccgggtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggca 1067

                                                                        
Query: 459  caaggacctgcggctgtacgaggggttcctgcacgacctgctcttcgaacccgagcgcga 518
            |||||| ||| |||||||||| |||||| ||||||| |||||||| || || ||||| ||
Sbjct: 1068 caaggatctgaggctgtacgatgggttcttgcacgatctgctctttgagcctgagcgtga 1127

                                  
Query: 519  cgagatcgccgccgacatcatc 540
             ||||||||| | |||||||||
Sbjct: 1128 tgagatcgccacagacatcatc 1149
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>dbj|AK070748.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023068O10, full
            insert sequence
          Length = 2538

 Score =  345 bits (174), Expect = 9e-92
 Identities = 375/442 (84%)
 Strand = Plus / Plus

                                                                        
Query: 99   actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatccgatagt 158
            ||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| || ||
Sbjct: 1828 actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcccattgt 1887

                                                                        
Query: 159  cggggcagtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaa 218
             ||||| ||||| || |||||||||||| | ||||| ||||| || ||||||||||| ||
Sbjct: 1888 aggggctgtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaa 1947

                                                                        
Query: 219  caagcggggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgaccc 278
            |||| | ||||||||||||||||||||||| || || |||||||| |||||||| || ||
Sbjct: 1948 caagagaggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatcc 2007

                                                                        
Query: 279  gctggtctacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctc 338
            |||||| ||||| ||||||||||| || || || ||||| || ||||| |||||||||||
Sbjct: 2008 gctggtttacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctc 2067

                                                                        
Query: 339  ctacctgctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggc 398
            |||||||||||||||| |||||||||| || ||||| ||  ||||||| || || || ||
Sbjct: 2068 ctacctgctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgc 2127

                                                                        
Query: 399  ggaccgggtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggca 458
             ||||||||||| ||||| ||||| || ||||| |||||||  |||||  | ||||||||
Sbjct: 2128 agaccgggtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggca 2187

                                                                        
Query: 459  caaggacctgcggctgtacgaggggttcctgcacgacctgctcttcgaacccgagcgcga 518
            |||||| ||| |||||||||| |||||| ||||||| |||||||| || || ||||| ||
Sbjct: 2188 caaggatctgaggctgtacgatgggttcttgcacgatctgctctttgagcctgagcgtga 2247

                                  
Query: 519  cgagatcgccgccgacatcatc 540
             ||||||||| | |||||||||
Sbjct: 2248 tgagatcgccacagacatcatc 2269
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>dbj|AK068509.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013154B19, full
            insert sequence
          Length = 1485

 Score =  345 bits (174), Expect = 9e-92
 Identities = 375/442 (84%)
 Strand = Plus / Plus

                                                                        
Query: 99   actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatccgatagt 158
            ||||||||| |||||||| |||||||||||| ||||||||||||| || ||||| || ||
Sbjct: 771  actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcccattgt 830

                                                                        
Query: 159  cggggcagtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaa 218
             ||||| ||||| || |||||||||||| | ||||| ||||| || ||||||||||| ||
Sbjct: 831  aggggctgtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaa 890

                                                                        
Query: 219  caagcggggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgaccc 278
            |||| | ||||||||||||||||||||||| || || |||||||| |||||||| || ||
Sbjct: 891  caagagaggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatcc 950

                                                                        
Query: 279  gctggtctacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctc 338
            |||||| ||||| ||||||||||| || || || ||||| || ||||| |||||||||||
Sbjct: 951  gctggtttacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctc 1010

                                                                        
Query: 339  ctacctgctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggc 398
            |||||||||||||||| |||||||||| || ||||| ||  ||||||| || || || ||
Sbjct: 1011 ctacctgctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgc 1070

                                                                        
Query: 399  ggaccgggtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggca 458
             ||||||||||| ||||| ||||| || ||||| |||||||  |||||  | ||||||||
Sbjct: 1071 agaccgggtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggca 1130

                                                                        
Query: 459  caaggacctgcggctgtacgaggggttcctgcacgacctgctcttcgaacccgagcgcga 518
            |||||| ||| |||||||||| |||||| ||||||| |||||||| || || ||||| ||
Sbjct: 1131 caaggatctgaggctgtacgatgggttcttgcacgatctgctctttgagcctgagcgtga 1190

                                  
Query: 519  cgagatcgccgccgacatcatc 540
             ||||||||| | |||||||||
Sbjct: 1191 tgagatcgccacagacatcatc 1212
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>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete
               sequence
          Length = 43261740

 Score =  283 bits (143), Expect = 3e-73
 Identities = 317/375 (84%)
 Strand = Plus / Minus

                                                                           
Query: 166     gtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaacaagcgg 225
               ||||| || |||||||||||| | ||||| ||||| || ||||||||||| |||||| | 
Sbjct: 5389484 gtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaacaagaga 5389425

                                                                           
Query: 226     ggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgacccgctggtc 285
               ||||||||||||||||||||||| || || |||||||| |||||||| || |||||||| 
Sbjct: 5389424 ggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatccgctggtt 5389365

                                                                           
Query: 286     tacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctcctacctg 345
               ||||| ||||||||||| || || || ||||| || ||||| ||||||||||||||||||
Sbjct: 5389364 tacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctcctacctg 5389305

                                                                           
Query: 346     ctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggcggaccgg 405
               ||||||||| |||||||||| || ||||| ||  ||||||| || || || || ||||||
Sbjct: 5389304 ctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgcagaccgg 5389245

                                                                           
Query: 406     gtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggcacaaggac 465
               ||||| ||||| ||||| || ||||| |||||||  |||||  | |||||||||||||| 
Sbjct: 5389244 gtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggcacaaggat 5389185

                                                                           
Query: 466     ctgcggctgtacgaggggttcctgcacgacctgctcttcgaacccgagcgcgacgagatc 525
               ||| |||||||||| |||||| ||||||| |||||||| || || ||||| || ||||||
Sbjct: 5389184 ctgaggctgtacgatgggttcttgcacgatctgctctttgagcctgagcgtgatgagatc 5389125

                              
Query: 526     gccgccgacatcatc 540
               ||| | |||||||||
Sbjct: 5389124 gccacagacatcatc 5389110



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                     
Query: 31       aatggtgcaaagcattaacaaaatagcctggttgaaa 67
                |||||||||||||||||||||||||||||||||||||
Sbjct: 41555276 aatggtgcaaagcattaacaaaatagcctggttgaaa 41555312



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                    
Query: 31      aatggtgcaaagcattaacaaaatagcctggttgaaa 67
               |||||||||||||||||||||||||||||||||||||
Sbjct: 5390191 aatggtgcaaagcattaacaaaatagcctggttgaaa 5390155



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                     
Query: 99      actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatcc 152
               ||||||||| |||||||| |||||||||||| ||||||||||||| || |||||
Sbjct: 5390036 actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcc 5389983



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                            
Query: 85       catatcagaaccagactggaagggatcatcctgacttcaccagc 128
                ||||||||| | | ||||||||| |||||||| |||||||||||
Sbjct: 41555417 catatcagagcaaaactggaaggcatcatcctaacttcaccagc 41555460
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>dbj|AP003200.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, BAC
              clone:B1046G12
          Length = 163533

 Score =  283 bits (143), Expect = 3e-73
 Identities = 317/375 (84%)
 Strand = Plus / Minus

                                                                          
Query: 166    gtggcaccgatattctctctgattgcacccaagttccaattcaagggagccaacaagcgg 225
              ||||| || |||||||||||| | ||||| ||||| || ||||||||||| |||||| | 
Sbjct: 140828 gtggcgccaatattctctctgttagcaccaaagtttcagttcaagggagctaacaagaga 140769

                                                                          
Query: 226    ggcatcccggtgtcccgcgaccctgcggcgctgctagcaaagtactctgacccgctggtc 285
              ||||||||||||||||||||||| || || |||||||| |||||||| || |||||||| 
Sbjct: 140768 ggcatcccggtgtcccgcgacccggctgccctgctagcgaagtactccgatccgctggtt 140709

                                                                          
Query: 286    tacacggggccgatcagggtccgtacgggccacgagatcctgcgcatctcctcctacctg 345
              ||||| ||||||||||| || || || ||||| || ||||| ||||||||||||||||||
Sbjct: 140708 tacaccgggccgatcagagttcggaccggccatgaaatcctacgcatctcctcctacctg 140649

                                                                          
Query: 346    ctgcacaacctgaagaaggtgactgtcccgtttgtggtcctgcacggcacggcggaccgg 405
              ||||||||| |||||||||| || ||||| ||  ||||||| || || || || ||||||
Sbjct: 140648 ctgcacaacttgaagaaggtcaccgtcccattcatggtcctccatggaaccgcagaccgg 140589

                                                                          
Query: 406    gtgacggacccgctggcctcgcaggagctctacagggaggcggcgtcgaggcacaaggac 465
              ||||| ||||| ||||| || ||||| |||||||  |||||  | |||||||||||||| 
Sbjct: 140588 gtgaccgaccccctggcttcacaggacctctacaacgaggcctcatcgaggcacaaggat 140529

                                                                          
Query: 466    ctgcggctgtacgaggggttcctgcacgacctgctcttcgaacccgagcgcgacgagatc 525
              ||| |||||||||| |||||| ||||||| |||||||| || || ||||| || ||||||
Sbjct: 140528 ctgaggctgtacgatgggttcttgcacgatctgctctttgagcctgagcgtgatgagatc 140469

                             
Query: 526    gccgccgacatcatc 540
              ||| | |||||||||
Sbjct: 140468 gccacagacatcatc 140454



 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 37/37 (100%)
 Strand = Plus / Minus

                                                   
Query: 31     aatggtgcaaagcattaacaaaatagcctggttgaaa 67
              |||||||||||||||||||||||||||||||||||||
Sbjct: 141535 aatggtgcaaagcattaacaaaatagcctggttgaaa 141499



 Score = 67.9 bits (34), Expect = 3e-08
 Identities = 49/54 (90%)
 Strand = Plus / Minus

                                                                    
Query: 99     actggaagggatcatcctgacttcaccagctgtgcgtgtaaaaccagcgcatcc 152
              ||||||||| |||||||| |||||||||||| ||||||||||||| || |||||
Sbjct: 141380 actggaaggcatcatcctaacttcaccagctctgcgtgtaaaacctgctcatcc 141327
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>dbj|AP004073.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0614D08
          Length = 147548

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                   
Query: 31     aatggtgcaaagcattaacaaaatagcctggttgaaa 67
              |||||||||||||||||||||||||||||||||||||
Sbjct: 111569 aatggtgcaaagcattaacaaaatagcctggttgaaa 111605



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 85     catatcagaaccagactggaagggatcatcctgacttcaccagc 128
              ||||||||| | | ||||||||| |||||||| |||||||||||
Sbjct: 111710 catatcagagcaaaactggaaggcatcatcctaacttcaccagc 111753
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>dbj|AP003687.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC
              clone:P0660F12
          Length = 147203

 Score = 73.8 bits (37), Expect = 5e-10
 Identities = 37/37 (100%)
 Strand = Plus / Plus

                                                   
Query: 31     aatggtgcaaagcattaacaaaatagcctggttgaaa 67
              |||||||||||||||||||||||||||||||||||||
Sbjct: 123475 aatggtgcaaagcattaacaaaatagcctggttgaaa 123511



 Score = 48.1 bits (24), Expect = 0.031
 Identities = 39/44 (88%)
 Strand = Plus / Plus

                                                          
Query: 85     catatcagaaccagactggaagggatcatcctgacttcaccagc 128
              ||||||||| | | ||||||||| |||||||| |||||||||||
Sbjct: 123616 catatcagagcaaaactggaaggcatcatcctaacttcaccagc 123659
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>ref|NM_121203.2| Arabidopsis thaliana catalytic/ hydrolase AT5G11650 mRNA, complete
           cds
          Length = 1571

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 138/176 (78%)
 Strand = Plus / Plus

                                                                       
Query: 133 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 192
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 798 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 857

                                                                       
Query: 193 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 252
           || | |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  
Sbjct: 858 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 917

                                                                   
Query: 253 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 308
           || ||  |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 918 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 973
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>emb|BX831480.1|CNS09ZGU Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTLS9ZB05 of Adult vegetative tissue of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1363

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 138/176 (78%)
 Strand = Plus / Plus

                                                                       
Query: 133 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 192
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 789 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 848

                                                                       
Query: 193 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 252
           || | |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  
Sbjct: 849 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 908

                                                                   
Query: 253 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 308
           || ||  |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 909 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 964
to top
>emb|BX831759.1|CNS09YN1 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH28ZC11 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1317

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 138/176 (78%)
 Strand = Plus / Plus

                                                                       
Query: 133 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 192
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 779 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 838

                                                                       
Query: 193 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 252
           || | |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  
Sbjct: 839 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 898

                                                                   
Query: 253 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 308
           || ||  |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 899 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 954
to top
>emb|BX830277.1|CNS09YO7 Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTFB6ZH11 of Flowers and buds of strain col-0 of
           Arabidopsis thaliana (thale cress)
          Length = 1296

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 138/176 (78%)
 Strand = Plus / Plus

                                                                       
Query: 133 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 192
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 734 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 793

                                                                       
Query: 193 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 252
           || | |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  
Sbjct: 794 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 853

                                                                   
Query: 253 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 308
           || ||  |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 854 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 909
to top
>gb|AY085467.1| Arabidopsis thaliana clone 15284 mRNA, complete sequence
          Length = 1406

 Score = 48.1 bits (24), Expect = 0.031
 Identities = 138/176 (78%)
 Strand = Plus / Plus

                                                                       
Query: 133 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 192
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 798 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 857

                                                                       
Query: 193 cccaagttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcg 252
           || | |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  
Sbjct: 858 ccaaggttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaa 917

                                                                   
Query: 253 gcgctgctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 308
           || ||  |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 918 gctctcttagccaagtactctgatccgttagtctacactggtccgattagagtccg 973
to top
>gb|AC147428.6| Medicago truncatula clone mth2-34i10, complete sequence
          Length = 112873

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 32/35 (91%)
 Strand = Plus / Plus

                                                
Query: 262   gcaaagtactctgacccgctggtctacacggggcc 296
             |||||||||||||| || ||||||||||| |||||
Sbjct: 82206 gcaaagtactctgatcctctggtctacacagggcc 82240
to top
>emb|AL163814.1|ATT22P22 Arabidopsis thaliana DNA chromosome 5, BAC clone T22P22 (ESSA project)
          Length = 93205

 Score = 46.1 bits (23), Expect = 0.12
 Identities = 89/111 (80%)
 Strand = Plus / Plus

                                                                         
Query: 198   gttccaattcaagggagccaacaagcggggcatcccggtgtcccgcgaccctgcggcgct 257
             |||||||||||| ||||| |||||| | ||||| ||||| ||  | |||||||  || ||
Sbjct: 25399 gttccaattcaaaggagcaaacaagagaggcattccggtctcaagagaccctgaagctct 25458

                                                                
Query: 258   gctagcaaagtactctgacccgctggtctacacggggccgatcagggtccg 308
               |||| ||||||||||| ||| | |||||||| || ||||| || |||||
Sbjct: 25459 cttagccaagtactctgatccgttagtctacactggtccgattagagtccg 25509
to top
>gb|AE009080.1| Agrobacterium tumefaciens str. C58 circular chromosome, section 106
            of 256 of the complete sequence
          Length = 10277

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 516  cgacgagatcgccgccgacatc 537
            ||||||||||||||||||||||
Sbjct: 7949 cgacgagatcgccgccgacatc 7928
to top
>emb|AM039952.1| Xanthomonas campestris pv. vesicatoria complete genome
          Length = 5178466

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 516     cgacgagatcgccgccgacatc 537
               ||||||||||||||||||||||
Sbjct: 4499473 cgacgagatcgccgccgacatc 4499452
to top
>emb|BX572599.1| Rhodopseudomonas palustris CGA009 complete genome; segment 7/16
          Length = 349142

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 516    cgacgagatcgccgccgacatc 537
              ||||||||||||||||||||||
Sbjct: 192686 cgacgagatcgccgccgacatc 192665
to top
>gb|AE012028.1| Xanthomonas axonopodis pv. citri str. 306,  section 406 of 469 of the
            complete genome
          Length = 10029

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                  
Query: 516  cgacgagatcgccgccgacatc 537
            ||||||||||||||||||||||
Sbjct: 2885 cgacgagatcgccgccgacatc 2864
to top
>gb|AE007869.1| Agrobacterium tumefaciens str. C58, complete genome
          Length = 2841581

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 516     cgacgagatcgccgccgacatc 537
               ||||||||||||||||||||||
Sbjct: 1167646 cgacgagatcgccgccgacatc 1167625
to top
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete
                sequence
          Length = 35954743

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                              
Query: 99       actggaagggatcatcctgacttcaccagc 128
                ||||||||| |||||||| |||||||||||
Sbjct: 22269025 actggaaggcatcatcctaacttcaccagc 22269054
to top
>dbj|BA000002.2| Aeropyrum pernix K1 DNA, complete genome
          Length = 1669695

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                    
Query: 492    cgacctgctcttcgaacccgag 513
              ||||||||||||||||||||||
Sbjct: 474373 cgacctgctcttcgaacccgag 474352
to top
>dbj|AP006161.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC
             clone:B1267B06
          Length = 156989

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 28/30 (93%)
 Strand = Plus / Plus

                                           
Query: 99    actggaagggatcatcctgacttcaccagc 128
             ||||||||| |||||||| |||||||||||
Sbjct: 27669 actggaaggcatcatcctaacttcaccagc 27698
to top
>dbj|AP006618.1| Nocardia farcinica IFM 10152 DNA, complete genome
          Length = 6021225

 Score = 44.1 bits (22), Expect = 0.48
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                     
Query: 516     cgacgagatcgccgccgacatc 537
               ||||||||||||||||||||||
Sbjct: 4017643 cgacgagatcgccgccgacatc 4017664



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 513     gcgcgacgagatcgccgccg 532
               ||||||||||||||||||||
Sbjct: 5245098 gcgcgacgagatcgccgccg 5245079



 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 510     cgagcgcgacgagatcgccg 529
               ||||||||||||||||||||
Sbjct: 1653041 cgagcgcgacgagatcgccg 1653022
to top
>gb|CP000091.1| Ralstonia eutropha JMP134 chromosome 2, complete sequence
          Length = 2726152

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 518    acgagatcgccgccgacatca 538
              |||||||||||||||||||||
Sbjct: 238284 acgagatcgccgccgacatca 238264
to top
>emb|BX119979.9| Zebrafish DNA sequence from clone CH211-201G8 in linkage group 1,
             complete sequence
          Length = 194023

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 116   tgacttcaccagctgtgcgtgtaaa 140
             ||||||| |||||||||||||||||
Sbjct: 54625 tgacttctccagctgtgcgtgtaaa 54601
to top
>dbj|BA000030.2| Streptomyces avermitilis MA-4680 genomic DNA, complete genome
          Length = 9025608

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                        
Query: 510     cgagcgcgacgagatcgccgccgac 534
               |||||||| ||||||||||||||||
Sbjct: 2091194 cgagcgcggcgagatcgccgccgac 2091170
to top
>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 512    agcgcgacgagatcgccgccg 532
              |||||||||||||||||||||
Sbjct: 480516 agcgcgacgagatcgccgccg 480536
to top
>emb|BX511083.17| Zebrafish DNA sequence from clone CH211-195F22 in linkage group 1,
             complete sequence
          Length = 211668

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 24/25 (96%)
 Strand = Plus / Minus

                                      
Query: 116   tgacttcaccagctgtgcgtgtaaa 140
             ||||||| |||||||||||||||||
Sbjct: 69397 tgacttctccagctgtgcgtgtaaa 69373
to top
>gb|U60417.1|SPU60417 Streptomyces pristinaespiralis 4-dimethylamino-L-phenylalanine
            precursor biosynthesis (papA, papC, papB, papM) genes,
            complete cds
          Length = 4740

 Score = 42.1 bits (21), Expect = 1.9
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                 
Query: 397  gcggaccgggtgacggacccg 417
            |||||||||||||||||||||
Sbjct: 2327 gcggaccgggtgacggacccg 2347
to top
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome
          Length = 4109442

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 213     agccaacaagcggggcatcccggt 236
               ||||||||||| ||||||||||||
Sbjct: 2106197 agccaacaagctgggcatcccggt 2106174
to top
>ref|XM_493741.2| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 887

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 510 cgagcgcgacgagatcgccgccga 533
           ||||||||| ||||||||||||||
Sbjct: 241 cgagcgcgaggagatcgccgccga 264
to top
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome
          Length = 6438405

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 213     agccaacaagcggggcatcccggt 236
               ||||||||||| ||||||||||||
Sbjct: 1275583 agccaacaagctgggcatcccggt 1275606
to top
>gb|AY658256.1| Synthetic construct Peudomonas aeruginosa clone FLH052696.01F
           PA3656 gene, partial cds
          Length = 741

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 agccaacaagcggggcatcccggt 236
           ||||||||||| ||||||||||||
Sbjct: 525 agccaacaagctgggcatcccggt 548
to top
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 213     agccaacaagcggggcatcccggt 236
               ||||||||||| ||||||||||||
Sbjct: 1694081 agccaacaagctgggcatcccggt 1694104
to top
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 213     agccaacaagcggggcatcccggt 236
               ||||||||||| ||||||||||||
Sbjct: 1523741 agccaacaagctgggcatcccggt 1523764
to top
>gb|CP000115.1| Nitrobacter winogradskyi Nb-255, complete genome
          Length = 3402093

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 503     tcgaacccgagcgcgacgag 522
               ||||||||||||||||||||
Sbjct: 3090759 tcgaacccgagcgcgacgag 3090778
to top
>gb|AC144563.15| Medicago truncatula clone mth2-5c24, complete sequence
          Length = 111376

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 101   tggaagggatcatcctgacttcac 124
             |||||||||| |||||||||||||
Sbjct: 94564 tggaagggatgatcctgacttcac 94541
to top
>gb|CP000283.1| Rhodopseudomonas palustris BisB5, complete genome
          Length = 4892717

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                           
Query: 510     cgagcgcgacgagatcgccgccgacatc 537
               |||||||| |||||||||||||| ||||
Sbjct: 1754854 cgagcgcggcgagatcgccgccggcatc 1754881
to top
>emb|AL645607.9| Mouse DNA sequence from clone RP23-298N21 on chromosome 11, complete
             sequence
          Length = 124112

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 98    gactggaagggatcatcctgactt 121
             ||||||| ||||||||||||||||
Sbjct: 83926 gactggatgggatcatcctgactt 83949
to top
>gb|CP000076.1| Pseudomonas fluorescens Pf-5, complete genome
          Length = 7074893

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                       
Query: 213     agccaacaagcggggcatcccggt 236
               ||||||||||| ||||||||||||
Sbjct: 1348428 agccaacaagctgggcatcccggt 1348451
to top
>dbj|AP007150.1| Aspergillus oryzae RIB40 genomic DNA, SC009
          Length = 1913118

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 376     tttgtggtcctgcacggcac 395
               ||||||||||||||||||||
Sbjct: 1175660 tttgtggtcctgcacggcac 1175641
to top
>gb|CP000248.1| Novosphingobium aromaticivorans DSM 12444, complete genome
          Length = 3561584

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 510     cgagcgcgacgagatcgccgccga 533
               |||||||||| |||||||||||||
Sbjct: 3049944 cgagcgcgacaagatcgccgccga 3049921
to top
>dbj|AK044942.1| Mus musculus 9.5 days embryo parthenogenote cDNA, RIKEN full-length
            enriched library, clone:B130014M11
            product:unclassifiable, full insert sequence
          Length = 1930

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 98   gactggaagggatcatcctgactt 121
            ||||||| ||||||||||||||||
Sbjct: 1324 gactggatgggatcatcctgactt 1347
to top
>dbj|AP008212.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6, complete
               sequence
          Length = 30731886

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 510     cgagcgcgacgagatcgccgccga 533
               ||||||||| ||||||||||||||
Sbjct: 2245347 cgagcgcgaggagatcgccgccga 2245324
to top
>emb|BX832067.1|CNS0A1XI Arabidopsis thaliana Full-length cDNA Complete sequence from clone
           GSLTPGH49ZF02 of Hormone Treated Callus of strain col-0
           of Arabidopsis thaliana (thale cress)
          Length = 1272

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 83/104 (79%)
 Strand = Plus / Plus

                                                                       
Query: 133 cgtgtaaaaccagcgcatccgatagtcggggcagtggcaccgatattctctctgattgca 192
           ||||| ||||| || ||||| || ||||||||| | || || || |||||  || | |||
Sbjct: 780 cgtgtcaaacccgctcatcccattgtcggggcaatagctccaatcttctcattgctcgca 839

                                                       
Query: 193 cccaagttccaattcaagggagccaacaagcggggcatcccggt 236
           || | |||||||||||| ||||| |||||| | ||||| |||||
Sbjct: 840 ccaaggttccaattcaaaggagcaaacaagagaggcattccggt 883
to top
>gb|AE004785.1| Pseudomonas aeruginosa PAO1, section 346 of 529 of the complete
            genome
          Length = 14537

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 213  agccaacaagcggggcatcccggt 236
            ||||||||||| ||||||||||||
Sbjct: 6923 agccaacaagctgggcatcccggt 6900
to top
>dbj|BA000035.2| Corynebacterium efficiens YS-314 DNA, complete genome
          Length = 3147090

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 214     gccaacaagcggggcatccc 233
               ||||||||||||||||||||
Sbjct: 2974843 gccaacaagcggggcatccc 2974824
to top
>dbj|AP000399.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 6,
              clone:P0535G04
          Length = 154180

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 510    cgagcgcgacgagatcgccgccga 533
              ||||||||| ||||||||||||||
Sbjct: 104804 cgagcgcgaggagatcgccgccga 104781
to top
>dbj|AK071423.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023098B10, full
           insert sequence
          Length = 887

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 510 cgagcgcgacgagatcgccgccga 533
           ||||||||| ||||||||||||||
Sbjct: 241 cgagcgcgaggagatcgccgccga 264
to top
>emb|CT573326.1| Pseudomonas entomophila str. L48 chromosome,complete sequence
          Length = 5888780

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                       
Query: 213     agccaacaagcggggcatcccggt 236
               ||||||||||| ||||||||||||
Sbjct: 4502966 agccaacaagctgggcatcccggt 4502943
to top
>dbj|AB010087.1| Pseudomonas aeruginosa rpsB, tsf, pyrH, frr genes for ribosomal
           protein S2, elongation factor Ts, UMP kinase, ribosome
           recycling factor, complete cds
          Length = 4003

 Score = 40.1 bits (20), Expect = 7.5
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 213 agccaacaagcggggcatcccggt 236
           ||||||||||| ||||||||||||
Sbjct: 787 agccaacaagctgggcatcccggt 810


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3,329,115
Number of Sequences: 3902068
Number of extensions: 3329115
Number of successful extensions: 59170
Number of sequences better than 10.0: 51
Number of HSP's better than 10.0 without gapping: 46
Number of HSP's successfully gapped in prelim test: 7
Number of HSP's that attempted gapping in prelim test: 57692
Number of HSP's gapped (non-prelim): 1479
length of query: 555
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 532
effective length of database: 17,143,297,704
effective search space: 9120234378528
effective search space used: 9120234378528
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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