ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal31j11
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1ref|XM_469004.1| Oryza sativa (japonica cultivar-group), mRNA 208 1e-50
2ref|XM_469003.1| Oryza sativa (japonica cultivar-group), mRNA 208 1e-50
3dbj|AK119211.1| Oryza sativa (japonica cultivar-group) cDNA clon... 208 1e-50
4gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 147 4e-32
5gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genom... 147 4e-32
6dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic D... 147 4e-32
7dbj|AK069267.1| Oryza sativa (japonica cultivar-group) cDNA clon... 88 3e-14
8gb|AC150310.1| Latimeria menadoensis clone VMRC4-40C18, complete... 44 0.45
9gb|AY543841.1| Salmo salar clone Alu311 microsatellite sequence 42 1.8
10gb|AC117837.4| Mus musculus BAC clone RP24-196P11 from 10, compl... 42 1.8
11gb|AC003044.1| Homo sapiens PAC clone RP5-1055C4 from 7, complet... 42 1.8
12gb|AC117671.8| Mus musculus chromosome 10, clone RP23-389G8, com... 42 1.8
13emb|AL606912.4| Human DNA sequence from clone RP11-39P6 on chrom... 42 1.8
14emb|AL136529.14| Human DNA sequence from clone RP4-797K12 on chr... 42 1.8
15dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete g... 42 1.8
16dbj|AP001712.1| Homo sapiens genomic DNA, chromosome 21q, sectio... 42 1.8
17gb|AE017221.1| Thermus thermophilus HB27, complete genome 42 1.8
18dbj|AP000466.1| Homo sapiens genomic DNA, chromosome 21q22.1, cl... 42 1.8
19dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone... 42 1.8
20ref|XM_473837.1| Oryza sativa (japonica cultivar-group), predic... 40 7.0
21gb|AE000661.1|HUAE000661 Homo sapiens T-cell receptor alpha delt... 40 7.0
22gb|AC003955.1| Homo sapiens chromosome 5, Pac clone 236L2 (LBNL ... 40 7.0
23gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosom... 40 7.0
24emb|BX901914.13| Zebrafish DNA sequence from clone DKEY-27F18 in... 40 7.0
25gb|AC074121.16| Homo sapiens BAC clone RP11-725M1 from 7, comple... 40 7.0
26emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4,... 40 7.0
27emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in ... 40 7.0
28gb|AC161424.3| Mus musculus BAC clone RP23-252J6 from chromosome... 40 7.0
29gb|AC109351.3| Homo sapiens BAC clone RP11-417M17 from 4, comple... 40 7.0
30gb|AC104582.3| Homo sapiens chromosome 8, clone RP11-1101K5, com... 40 7.0
31gb|AC013543.16| Homo sapiens chromosome 8, clone RP11-317H6, com... 40 7.0
32gb|AC025133.6| Homo sapiens chromosome 8, clone RP11-227F6, comp... 40 7.0
33gb|AC182809.1| Gasterosteus aculeatus clone VMRC28-105K14, compl... 40 7.0
34gb|M94081.1|HUMTCRADCV Human Tcr-C-delta gene, exons 1-4; Tcr-V-... 40 7.0
35gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76... 40 7.0
36dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic D... 40 7.0
37gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, r... 40 7.0
38dbj|AK103652.1| Oryza sativa (japonica cultivar-group) cDNA clon... 40 7.0
39gb|AC148972.4| Mus musculus BAC clone RP24-82J4 from chromosome ... 40 7.0
40emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clon... 40 7.0
41dbj|AP005363.2| Homo sapiens genomic DNA, chromosome 8q23, clone... 40 7.0
42gb|AC156444.2| Volvox carteri clone JGIAOBO-25G3, complete sequence 40 7.0
43ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus ... 40 7.0
44emb|AL954194.8| Mouse DNA sequence from clone RP24-558L14 on chr... 40 7.0 
>ref|XM_469004.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2702

 Score =  208 bits (105), Expect = 1e-50
 Identities = 246/293 (83%)
 Strand = Plus / Plus

                                                                       
Query: 11  aggaatggaaaatctctgcccaagatgagagcctactatcaagtgtagtgtttttgggca 70
           |||||||||| || |||||  || ||||||| || || |||||||||||||||   || |
Sbjct: 542 aggaatggaacatttctgctgaaaatgagagtctgctctcaagtgtagtgtttgctggta 601

                                                                       
Query: 71  tgttaataggagcatgtggttggggatatgtgtctgacaaatatgggcgaaggactggtt 130
           || |||||||||| | ||||||||| | ||||||||||||||||||  |||||| | | |
Sbjct: 602 tgctaataggagcttctggttggggttttgtgtctgacaaatatggaagaaggatttgct 661

                                                                       
Query: 131 tactgttttcaactctgtttactactggaatgggtttcctaagtgctttgtctccaaact 190
           |||| |||||||| |||||| | | |||||||||||| ||||||||||| ||||| || |
Sbjct: 662 tactattttcaaccctgtttgccagtggaatgggttttctaagtgctttctctcctaatt 721

                                                                       
Query: 191 atttaagtttgatggctcttcgctttctcgttggcgtaggactgggtggcagccatgtgt 250
           ||| | | ||| ||||||| || |||||||||||| ||||| |||||||    |||||||
Sbjct: 722 attcatgcttgctggctctacgttttctcgttggcataggagtgggtggtgcacatgtgt 781

                                                                
Query: 251 attcatcttggtttttggagtttgttcctgcacaaaatcgtggcttttggatg 303
            | |||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 782 ttacatcttggtttttggagtttgttcctgcacaaaatcgtggcacttggatg 834



 Score =  153 bits (77), Expect = 7e-34
 Identities = 164/193 (84%)
 Strand = Plus / Plus

                                                                        
Query: 323  ggactactggcacagtcttggaggcttcacttgcatggattgtcgtatcaacattgactt 382
            |||||| ||||||  ||||||||||||||||||||||| ||||  |||||  ||||| ||
Sbjct: 854  ggactattggcaccatcttggaggcttcacttgcatgggttgttatatcagtattgagtt 913

                                                                        
Query: 383  ggaggtggttgctagcattgactgccatcccttgctttctcttgctccctttctttggaa 442
            |||||||||||||||||||||||||  | || |||| ||||||| | || ||||||||||
Sbjct: 914  ggaggtggttgctagcattgactgcacttccatgctctctcttgattccattctttggaa 973

                                                                        
Query: 443  ttacacctgaatcgccacgctatctgtgtgcgcaaaatagaatgtctgatgcaacacttg 502
             ||||||||| || || |||||| | |||| |||||||||||  ||||||||||  ||||
Sbjct: 974  ctacacctgagtcaccgcgctatttatgtgggcaaaatagaacatctgatgcaatgcttg 1033

                         
Query: 503  tcttggagagaat 515
            || ||||||||||
Sbjct: 1034 tcctggagagaat 1046
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>ref|XM_469003.1| Oryza sativa (japonica cultivar-group),  mRNA
          Length = 2164

 Score =  208 bits (105), Expect = 1e-50
 Identities = 246/293 (83%)
 Strand = Plus / Plus

                                                                       
Query: 11  aggaatggaaaatctctgcccaagatgagagcctactatcaagtgtagtgtttttgggca 70
           |||||||||| || |||||  || ||||||| || || |||||||||||||||   || |
Sbjct: 542 aggaatggaacatttctgctgaaaatgagagtctgctctcaagtgtagtgtttgctggta 601

                                                                       
Query: 71  tgttaataggagcatgtggttggggatatgtgtctgacaaatatgggcgaaggactggtt 130
           || |||||||||| | ||||||||| | ||||||||||||||||||  |||||| | | |
Sbjct: 602 tgctaataggagcttctggttggggttttgtgtctgacaaatatggaagaaggatttgct 661

                                                                       
Query: 131 tactgttttcaactctgtttactactggaatgggtttcctaagtgctttgtctccaaact 190
           |||| |||||||| |||||| | | |||||||||||| ||||||||||| ||||| || |
Sbjct: 662 tactattttcaaccctgtttgccagtggaatgggttttctaagtgctttctctcctaatt 721

                                                                       
Query: 191 atttaagtttgatggctcttcgctttctcgttggcgtaggactgggtggcagccatgtgt 250
           ||| | | ||| ||||||| || |||||||||||| ||||| |||||||    |||||||
Sbjct: 722 attcatgcttgctggctctacgttttctcgttggcataggagtgggtggtgcacatgtgt 781

                                                                
Query: 251 attcatcttggtttttggagtttgttcctgcacaaaatcgtggcttttggatg 303
            | |||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 782 ttacatcttggtttttggagtttgttcctgcacaaaatcgtggcacttggatg 834



 Score =  153 bits (77), Expect = 7e-34
 Identities = 164/193 (84%)
 Strand = Plus / Plus

                                                                        
Query: 323  ggactactggcacagtcttggaggcttcacttgcatggattgtcgtatcaacattgactt 382
            |||||| ||||||  ||||||||||||||||||||||| ||||  |||||  ||||| ||
Sbjct: 854  ggactattggcaccatcttggaggcttcacttgcatgggttgttatatcagtattgagtt 913

                                                                        
Query: 383  ggaggtggttgctagcattgactgccatcccttgctttctcttgctccctttctttggaa 442
            |||||||||||||||||||||||||  | || |||| ||||||| | || ||||||||||
Sbjct: 914  ggaggtggttgctagcattgactgcacttccatgctctctcttgattccattctttggaa 973

                                                                        
Query: 443  ttacacctgaatcgccacgctatctgtgtgcgcaaaatagaatgtctgatgcaacacttg 502
             ||||||||| || || |||||| | |||| |||||||||||  ||||||||||  ||||
Sbjct: 974  ctacacctgagtcaccgcgctatttatgtgggcaaaatagaacatctgatgcaatgcttg 1033

                         
Query: 503  tcttggagagaat 515
            || ||||||||||
Sbjct: 1034 tcctggagagaat 1046
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>dbj|AK119211.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-041-E05, full
           insert sequence
          Length = 2108

 Score =  208 bits (105), Expect = 1e-50
 Identities = 246/293 (83%)
 Strand = Plus / Plus

                                                                       
Query: 11  aggaatggaaaatctctgcccaagatgagagcctactatcaagtgtagtgtttttgggca 70
           |||||||||| || |||||  || ||||||| || || |||||||||||||||   || |
Sbjct: 530 aggaatggaacatttctgctgaaaatgagagtctgctctcaagtgtagtgtttgctggta 589

                                                                       
Query: 71  tgttaataggagcatgtggttggggatatgtgtctgacaaatatgggcgaaggactggtt 130
           || |||||||||| | ||||||||| | ||||||||||||||||||  |||||| | | |
Sbjct: 590 tgctaataggagcttctggttggggttttgtgtctgacaaatatggaagaaggatttgct 649

                                                                       
Query: 131 tactgttttcaactctgtttactactggaatgggtttcctaagtgctttgtctccaaact 190
           |||| |||||||| |||||| | | |||||||||||| ||||||||||| ||||| || |
Sbjct: 650 tactattttcaaccctgtttgccagtggaatgggttttctaagtgctttctctcctaatt 709

                                                                       
Query: 191 atttaagtttgatggctcttcgctttctcgttggcgtaggactgggtggcagccatgtgt 250
           ||| | | ||| ||||||| || |||||||||||| ||||| |||||||    |||||||
Sbjct: 710 attcatgcttgctggctctacgttttctcgttggcataggagtgggtggtgcacatgtgt 769

                                                                
Query: 251 attcatcttggtttttggagtttgttcctgcacaaaatcgtggcttttggatg 303
            | |||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 770 ttacatcttggtttttggagtttgttcctgcacaaaatcgtggcacttggatg 822



 Score =  153 bits (77), Expect = 7e-34
 Identities = 164/193 (84%)
 Strand = Plus / Plus

                                                                        
Query: 323  ggactactggcacagtcttggaggcttcacttgcatggattgtcgtatcaacattgactt 382
            |||||| ||||||  ||||||||||||||||||||||| ||||  |||||  ||||| ||
Sbjct: 842  ggactattggcaccatcttggaggcttcacttgcatgggttgttatatcagtattgagtt 901

                                                                        
Query: 383  ggaggtggttgctagcattgactgccatcccttgctttctcttgctccctttctttggaa 442
            |||||||||||||||||||||||||  | || |||| ||||||| | || ||||||||||
Sbjct: 902  ggaggtggttgctagcattgactgcacttccatgctctctcttgattccattctttggaa 961

                                                                        
Query: 443  ttacacctgaatcgccacgctatctgtgtgcgcaaaatagaatgtctgatgcaacacttg 502
             ||||||||| || || |||||| | |||| |||||||||||  ||||||||||  ||||
Sbjct: 962  ctacacctgagtcaccgcgctatttatgtgggcaaaatagaacatctgatgcaatgcttg 1021

                         
Query: 503  tcttggagagaat 515
            || ||||||||||
Sbjct: 1022 tcctggagagaat 1034
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>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3
          Length = 36102668

 Score =  147 bits (74), Expect = 4e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                            
Query: 130      ttactgttttcaactctgtttactactggaatgggtttcctaagtgctttgtctccaaac 189
                ||||| |||||||| |||||| | | |||||||||||| ||||||||||| ||||| || 
Sbjct: 24338684 ttactattttcaaccctgtttgccagtggaatgggttttctaagtgctttctctcctaat 24338743

                                                                            
Query: 190      tatttaagtttgatggctcttcgctttctcgttggcgtaggactgggtggcagccatgtg 249
                |||| | | ||| ||||||| || |||||||||||| ||||| |||||||    ||||||
Sbjct: 24338744 tattcatgcttgctggctctacgttttctcgttggcataggagtgggtggtgcacatgtg 24338803

                                                                      
Query: 250      tattcatcttggtttttggagtttgttcctgcacaaaatcgtggcttttggatg 303
                | | |||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 24338804 tttacatcttggtttttggagtttgttcctgcacaaaatcgtggcacttggatg 24338857



 Score =  113 bits (57), Expect = 6e-22
 Identities = 120/141 (85%)
 Strand = Plus / Plus

                                                                            
Query: 375      attgacttggaggtggttgctagcattgactgccatcccttgctttctcttgctcccttt 434
                ||||| |||||||||||||||||||||||||||  | || |||| ||||||| | || ||
Sbjct: 24339452 attgagttggaggtggttgctagcattgactgcacttccatgctctctcttgattccatt 24339511

                                                                            
Query: 435      ctttggaattacacctgaatcgccacgctatctgtgtgcgcaaaatagaatgtctgatgc 494
                |||||||| ||||||||| || || |||||| | |||| |||||||||||  ||||||||
Sbjct: 24339512 ctttggaactacacctgagtcaccgcgctatttatgtgggcaaaatagaacatctgatgc 24339571

                                     
Query: 495      aacacttgtcttggagagaat 515
                ||  |||||| ||||||||||
Sbjct: 24339572 aatgcttgtcctggagagaat 24339592



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 89/106 (83%)
 Strand = Plus / Plus

                                                                            
Query: 11       aggaatggaaaatctctgcccaagatgagagcctactatcaagtgtagtgtttttgggca 70
                |||||||||| || |||||  || ||||||| || || |||||||||||||||   || |
Sbjct: 24338168 aggaatggaacatttctgctgaaaatgagagtctgctctcaagtgtagtgtttgctggta 24338227

                                                              
Query: 71       tgttaataggagcatgtggttggggatatgtgtctgacaaatatgg 116
                || |||||||||| | ||||||||| | ||||||||||||||||||
Sbjct: 24338228 tgctaataggagcttctggttggggttttgtgtctgacaaatatgg 24338273



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 323      ggactactggcacagtcttggaggcttcacttgcatgg 360
                |||||| ||||||  |||||||||||||||||||||||
Sbjct: 24338877 ggactattggcaccatcttggaggcttcacttgcatgg 24338914
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>gb|AC120505.7| Oryza sativa chromosome 3 BAC OSJNBa0066H15 genomic sequence, complete
             sequence
          Length = 171664

 Score =  147 bits (74), Expect = 4e-32
 Identities = 149/174 (85%)
 Strand = Plus / Minus

                                                                         
Query: 130   ttactgttttcaactctgtttactactggaatgggtttcctaagtgctttgtctccaaac 189
             ||||| |||||||| |||||| | | |||||||||||| ||||||||||| ||||| || 
Sbjct: 41940 ttactattttcaaccctgtttgccagtggaatgggttttctaagtgctttctctcctaat 41881

                                                                         
Query: 190   tatttaagtttgatggctcttcgctttctcgttggcgtaggactgggtggcagccatgtg 249
             |||| | | ||| ||||||| || |||||||||||| ||||| |||||||    ||||||
Sbjct: 41880 tattcatgcttgctggctctacgttttctcgttggcataggagtgggtggtgcacatgtg 41821

                                                                   
Query: 250   tattcatcttggtttttggagtttgttcctgcacaaaatcgtggcttttggatg 303
             | | |||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 41820 tttacatcttggtttttggagtttgttcctgcacaaaatcgtggcacttggatg 41767



 Score =  113 bits (57), Expect = 6e-22
 Identities = 120/141 (85%)
 Strand = Plus / Minus

                                                                         
Query: 375   attgacttggaggtggttgctagcattgactgccatcccttgctttctcttgctcccttt 434
             ||||| |||||||||||||||||||||||||||  | || |||| ||||||| | || ||
Sbjct: 41172 attgagttggaggtggttgctagcattgactgcacttccatgctctctcttgattccatt 41113

                                                                         
Query: 435   ctttggaattacacctgaatcgccacgctatctgtgtgcgcaaaatagaatgtctgatgc 494
             |||||||| ||||||||| || || |||||| | |||| |||||||||||  ||||||||
Sbjct: 41112 ctttggaactacacctgagtcaccgcgctatttatgtgggcaaaatagaacatctgatgc 41053

                                  
Query: 495   aacacttgtcttggagagaat 515
             ||  |||||| ||||||||||
Sbjct: 41052 aatgcttgtcctggagagaat 41032



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 89/106 (83%)
 Strand = Plus / Minus

                                                                         
Query: 11    aggaatggaaaatctctgcccaagatgagagcctactatcaagtgtagtgtttttgggca 70
             |||||||||| || |||||  || ||||||| || || |||||||||||||||   || |
Sbjct: 42456 aggaatggaacatttctgctgaaaatgagagtctgctctcaagtgtagtgtttgctggta 42397

                                                           
Query: 71    tgttaataggagcatgtggttggggatatgtgtctgacaaatatgg 116
             || |||||||||| | ||||||||| | ||||||||||||||||||
Sbjct: 42396 tgctaataggagcttctggttggggttttgtgtctgacaaatatgg 42351



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Minus

                                                   
Query: 323   ggactactggcacagtcttggaggcttcacttgcatgg 360
             |||||| ||||||  |||||||||||||||||||||||
Sbjct: 41747 ggactattggcaccatcttggaggcttcacttgcatgg 41710
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>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete
                sequence
          Length = 36192742

 Score =  147 bits (74), Expect = 4e-32
 Identities = 149/174 (85%)
 Strand = Plus / Plus

                                                                            
Query: 130      ttactgttttcaactctgtttactactggaatgggtttcctaagtgctttgtctccaaac 189
                ||||| |||||||| |||||| | | |||||||||||| ||||||||||| ||||| || 
Sbjct: 24256153 ttactattttcaaccctgtttgccagtggaatgggttttctaagtgctttctctcctaat 24256212

                                                                            
Query: 190      tatttaagtttgatggctcttcgctttctcgttggcgtaggactgggtggcagccatgtg 249
                |||| | | ||| ||||||| || |||||||||||| ||||| |||||||    ||||||
Sbjct: 24256213 tattcatgcttgctggctctacgttttctcgttggcataggagtgggtggtgcacatgtg 24256272

                                                                      
Query: 250      tattcatcttggtttttggagtttgttcctgcacaaaatcgtggcttttggatg 303
                | | |||||||||||||||||||||||||||||||||||||||||  |||||||
Sbjct: 24256273 tttacatcttggtttttggagtttgttcctgcacaaaatcgtggcacttggatg 24256326



 Score =  113 bits (57), Expect = 6e-22
 Identities = 120/141 (85%)
 Strand = Plus / Plus

                                                                            
Query: 375      attgacttggaggtggttgctagcattgactgccatcccttgctttctcttgctcccttt 434
                ||||| |||||||||||||||||||||||||||  | || |||| ||||||| | || ||
Sbjct: 24256921 attgagttggaggtggttgctagcattgactgcacttccatgctctctcttgattccatt 24256980

                                                                            
Query: 435      ctttggaattacacctgaatcgccacgctatctgtgtgcgcaaaatagaatgtctgatgc 494
                |||||||| ||||||||| || || |||||| | |||| |||||||||||  ||||||||
Sbjct: 24256981 ctttggaactacacctgagtcaccgcgctatttatgtgggcaaaatagaacatctgatgc 24257040

                                     
Query: 495      aacacttgtcttggagagaat 515
                ||  |||||| ||||||||||
Sbjct: 24257041 aatgcttgtcctggagagaat 24257061



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 89/106 (83%)
 Strand = Plus / Plus

                                                                            
Query: 11       aggaatggaaaatctctgcccaagatgagagcctactatcaagtgtagtgtttttgggca 70
                |||||||||| || |||||  || ||||||| || || |||||||||||||||   || |
Sbjct: 24255637 aggaatggaacatttctgctgaaaatgagagtctgctctcaagtgtagtgtttgctggta 24255696

                                                              
Query: 71       tgttaataggagcatgtggttggggatatgtgtctgacaaatatgg 116
                || |||||||||| | ||||||||| | ||||||||||||||||||
Sbjct: 24255697 tgctaataggagcttctggttggggttttgtgtctgacaaatatgg 24255742



 Score = 52.0 bits (26), Expect = 0.002
 Identities = 35/38 (92%)
 Strand = Plus / Plus

                                                      
Query: 323      ggactactggcacagtcttggaggcttcacttgcatgg 360
                |||||| ||||||  |||||||||||||||||||||||
Sbjct: 24256346 ggactattggcaccatcttggaggcttcacttgcatgg 24256383
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>dbj|AK069267.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023013A09, full
           insert sequence
          Length = 923

 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 116/140 (82%)
 Strand = Plus / Plus

                                                                       
Query: 11  aggaatggaaaatctctgcccaagatgagagcctactatcaagtgtagtgtttttgggca 70
           |||||||||| || |||||  || ||||||| || || |||||||||||||||   || |
Sbjct: 776 aggaatggaacatttctgctgaaaatgagagtctgctctcaagtgtagtgtttgctggta 835

                                                                       
Query: 71  tgttaataggagcatgtggttggggatatgtgtctgacaaatatgggcgaaggactggtt 130
           || |||||||||| | ||||||||| | ||||||||||||||||||  |||||| | | |
Sbjct: 836 tgctaataggagcttctggttggggttttgtgtctgacaaatatggaagaaggatttgct 895

                               
Query: 131 tactgttttcaactctgttt 150
           |||| |||||||| ||||||
Sbjct: 896 tactattttcaaccctgttt 915
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>gb|AC150310.1| Latimeria menadoensis clone VMRC4-40C18, complete sequence
          Length = 170774

 Score = 44.1 bits (22), Expect = 0.45
 Identities = 28/30 (93%)
 Strand = Plus / Minus

                                            
Query: 162    gggtttcctaagtgctttgtctccaaacta 191
              ||||| ||||||| ||||||||||||||||
Sbjct: 137338 gggttacctaagttctttgtctccaaacta 137309
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>gb|AY543841.1| Salmo salar clone Alu311 microsatellite sequence
          Length = 557

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                    
Query: 79  ggagcatgtggttggggatatgtgt 103
           ||||||||||| |||||||||||||
Sbjct: 20  ggagcatgtggatggggatatgtgt 44
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>gb|AC117837.4| Mus musculus BAC clone RP24-196P11 from 10, complete sequence
          Length = 145990

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 411   cccttgctttctcttgctccc 431
             |||||||||||||||||||||
Sbjct: 12048 cccttgctttctcttgctccc 12028
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>gb|AC003044.1| Homo sapiens PAC clone RP5-1055C4 from 7, complete sequence
          Length = 81231

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 111   atatgggcgaaggactggttt 131
             |||||||||||||||||||||
Sbjct: 12419 atatgggcgaaggactggttt 12439
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>gb|AC117671.8| Mus musculus chromosome 10, clone RP23-389G8, complete sequence
          Length = 189341

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 411   cccttgctttctcttgctccc 431
             |||||||||||||||||||||
Sbjct: 94205 cccttgctttctcttgctccc 94225
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>emb|AL606912.4| Human DNA sequence from clone RP11-39P6 on chromosome 6, complete
             sequence
          Length = 63444

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                  
Query: 410   tcccttgctttctcttgctcc 430
             |||||||||||||||||||||
Sbjct: 18407 tcccttgctttctcttgctcc 18387
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>emb|AL136529.14| Human DNA sequence from clone RP4-797K12 on chromosome 1p35-36.2 Contains
              the 3' end of a novel gene and the gene for a novel actin
              like protein (LOC81569), complete sequence
          Length = 154028

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 24/25 (96%)
 Strand = Plus / Plus

                                       
Query: 413    cttgctttctcttgctccctttctt 437
              |||||| ||||||||||||||||||
Sbjct: 142987 cttgctctctcttgctccctttctt 143011
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>dbj|AP008226.1| Thermus thermophilus HB8 genomic DNA, complete genome
          Length = 1849742

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 220     gttggcgtaggactgggtggc 240
               |||||||||||||||||||||
Sbjct: 1766495 gttggcgtaggactgggtggc 1766515
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>dbj|AP001712.1| Homo sapiens genomic DNA, chromosome 21q, section 56/105
          Length = 340000

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                           
Query: 410    tcccttgctttctcttgctccctttcttt 438
              |||||| |||||||| |||||||||||||
Sbjct: 147531 tccctttctttctctcgctccctttcttt 147559
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>gb|AE017221.1| Thermus thermophilus HB27, complete genome
          Length = 1894877

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                    
Query: 220     gttggcgtaggactgggtggc 240
               |||||||||||||||||||||
Sbjct: 1443200 gttggcgtaggactgggtggc 1443220
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>dbj|AP000466.1| Homo sapiens genomic DNA, chromosome 21q22.1, clone:B140B9, complete
             sequence
          Length = 119580

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 27/29 (93%)
 Strand = Plus / Plus

                                          
Query: 410   tcccttgctttctcttgctccctttcttt 438
             |||||| |||||||| |||||||||||||
Sbjct: 90818 tccctttctttctctcgctccctttcttt 90846
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>dbj|AP003789.1| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1433G4, complete
             sequence
          Length = 175784

 Score = 42.1 bits (21), Expect = 1.8
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                  
Query: 417   ctttctcttgctccctttctt 437
             |||||||||||||||||||||
Sbjct: 94022 ctttctcttgctccctttctt 94042
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>ref|XM_473837.1| Oryza sativa (japonica cultivar-group),  predicted mRNA
          Length = 1767

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 tggaggtggttgctagcatt 401
           ||||||||||||||||||||
Sbjct: 829 tggaggtggttgctagcatt 848



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 254 catcttggtttttggagtttgttcctgc 281
           |||||||||| ||||| |||||||||||
Sbjct: 701 catcttggttcttggaatttgttcctgc 728
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>gb|AE000661.1|HUAE000661 Homo sapiens T-cell receptor alpha delta locus from bases 752679 to
              1000555 (section 4 of 5) of the Complete Nucleotide
              Sequence
          Length = 247877

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 89     gttggggatatgtgtctgacaaat 112
              ||||| ||||||||||||||||||
Sbjct: 233755 gttggagatatgtgtctgacaaat 233778
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>gb|AC003955.1| Homo sapiens chromosome 5, Pac clone 236L2 (LBNL H93), complete
             sequence
          Length = 31466

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 176   ctttgtctccaaactattta 195
             ||||||||||||||||||||
Sbjct: 24773 ctttgtctccaaactattta 24792
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>gb|AC164880.3| Mus musculus BAC clone RP23-321G17 from chromosome 7, complete sequence
          Length = 210387

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 231   actgggtggcagccatgtgt 250
             ||||||||||||||||||||
Sbjct: 87615 actgggtggcagccatgtgt 87634
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>emb|BX901914.13| Zebrafish DNA sequence from clone DKEY-27F18 in linkage group 4,
             complete sequence
          Length = 149383

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 416   gctttctcttgctccctttctttg 439
             ||||||| ||||||||||||||||
Sbjct: 37305 gctttcttttgctccctttctttg 37282
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>gb|AC074121.16| Homo sapiens BAC clone RP11-725M1 from 7, complete sequence
          Length = 166379

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 415   tgctttctcttgctccctttcttt 438
             ||||||||||| ||||||||||||
Sbjct: 94364 tgctttctctttctccctttcttt 94387
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>emb|AL606691.4|OSJN00081 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBa0060N03,
              complete sequence
          Length = 179798

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                          
Query: 254    catcttggtttttggagtttgttcctgc 281
              |||||||||| ||||| |||||||||||
Sbjct: 155378 catcttggttcttggaatttgttcctgc 155351



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 382    tggaggtggttgctagcatt 401
              ||||||||||||||||||||
Sbjct: 155055 tggaggtggttgctagcatt 155036
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>emb|BX004862.9| Zebrafish DNA sequence from clone DKEY-200M9 in linkage group 4
             Contains the gene for a novel protein similar to
             vertebrate TAFA protein 5 (TAFA5) and a CpG island,
             complete sequence
          Length = 174359

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 416   gctttctcttgctccctttctttg 439
             ||||||| ||||||||||||||||
Sbjct: 70699 gctttcttttgctccctttctttg 70722
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>gb|AC161424.3| Mus musculus BAC clone RP23-252J6 from chromosome 9, complete sequence
          Length = 244497

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 169    ctaagtgctttgtctccaaa 188
              ||||||||||||||||||||
Sbjct: 172680 ctaagtgctttgtctccaaa 172699
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>gb|AC109351.3| Homo sapiens BAC clone RP11-417M17 from 4, complete sequence
          Length = 133157

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 418   tttctcttgctccctttctt 437
             ||||||||||||||||||||
Sbjct: 64268 tttctcttgctccctttctt 64287
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>gb|AC104582.3| Homo sapiens chromosome 8, clone RP11-1101K5, complete sequence
          Length = 186127

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 417    ctttctcttgctccctttct 436
              ||||||||||||||||||||
Sbjct: 144510 ctttctcttgctccctttct 144491
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>gb|AC013543.16| Homo sapiens chromosome 8, clone RP11-317H6, complete sequence
          Length = 177777

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 431   ctttctttggaattacacct 450
             ||||||||||||||||||||
Sbjct: 74270 ctttctttggaattacacct 74289
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>gb|AC025133.6| Homo sapiens chromosome 8, clone RP11-227F6, complete sequence
          Length = 161644

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 431  ctttctttggaattacacct 450
            ||||||||||||||||||||
Sbjct: 8882 ctttctttggaattacacct 8863
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>gb|AC182809.1| Gasterosteus aculeatus clone VMRC28-105K14, complete sequence
          Length = 134684

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 407   ccatcccttgctttctcttgctcc 430
             ||||| ||||||||||||||||||
Sbjct: 28567 ccatctcttgctttctcttgctcc 28544
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>gb|M94081.1|HUMTCRADCV Human Tcr-C-delta gene, exons 1-4; Tcr-V-delta gene, exons 1-2; T-cell
             receptor alpha (Tcr-alpha) gene, J1-J61 segments; and
             Tcr-C-alpha gene, exons 1-4
          Length = 97630

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 89    gttggggatatgtgtctgacaaat 112
             ||||| ||||||||||||||||||
Sbjct: 20047 gttggagatatgtgtctgacaaat 20070
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>gb|AE003738.3| Drosophila melanogaster chromosome 3R, section 76 of 118 of the complete
              sequence
          Length = 287397

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 464    atctgtgtgcgcaaaataga 483
              ||||||||||||||||||||
Sbjct: 220643 atctgtgtgcgcaaaataga 220662
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>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete
                sequence
          Length = 35498469

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                            
Query: 254      catcttggtttttggagtttgttcctgc 281
                |||||||||| ||||| |||||||||||
Sbjct: 30887857 catcttggttcttggaatttgttcctgc 30887830



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                    
Query: 382      tggaggtggttgctagcatt 401
                ||||||||||||||||||||
Sbjct: 30887534 tggaggtggttgctagcatt 30887515
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>gb|AC009915.5|AC009915 Drosophila melanogaster, chromosome 3R, region 94A-94A, BAC clone
              BACR09L14, complete sequence
          Length = 167368

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 464    atctgtgtgcgcaaaataga 483
              ||||||||||||||||||||
Sbjct: 130463 atctgtgtgcgcaaaataga 130482
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>dbj|AK103652.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033135D24, full
           insert sequence
          Length = 1952

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 382 tggaggtggttgctagcatt 401
           ||||||||||||||||||||
Sbjct: 907 tggaggtggttgctagcatt 926



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Plus

                                       
Query: 254 catcttggtttttggagtttgttcctgc 281
           |||||||||| ||||| |||||||||||
Sbjct: 779 catcttggttcttggaatttgttcctgc 806
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>gb|AC148972.4| Mus musculus BAC clone RP24-82J4 from chromosome 7, complete sequence
          Length = 221912

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 231    actgggtggcagccatgtgt 250
              ||||||||||||||||||||
Sbjct: 144891 actgggtggcagccatgtgt 144910
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>emb|AL442105.2| Oryza sativa genomic DNA, chromosome 4, BAC clone: H0702G05, complete
             sequence
          Length = 134586

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 26/28 (92%)
 Strand = Plus / Minus

                                         
Query: 254   catcttggtttttggagtttgttcctgc 281
             |||||||||| ||||| |||||||||||
Sbjct: 64432 catcttggttcttggaatttgttcctgc 64405



 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 382   tggaggtggttgctagcatt 401
             ||||||||||||||||||||
Sbjct: 64109 tggaggtggttgctagcatt 64090
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>dbj|AP005363.2| Homo sapiens genomic DNA, chromosome 8q23, clone: KB1653C10, complete
             sequence
          Length = 158682

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 417   ctttctcttgctccctttct 436
             ||||||||||||||||||||
Sbjct: 51603 ctttctcttgctccctttct 51622
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>gb|AC156444.2| Volvox carteri clone JGIAOBO-25G3, complete sequence
          Length = 37040

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 404   ctgccatcccttgctttctc 423
             ||||||||||||||||||||
Sbjct: 22242 ctgccatcccttgctttctc 22223
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>ref|NG_001332.1| Homo sapiens T cell receptor alpha delta locus (TCRA/TCRD) on chromosome
              14
          Length = 1071646

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 89     gttggggatatgtgtctgacaaat 112
              ||||| ||||||||||||||||||
Sbjct: 986433 gttggagatatgtgtctgacaaat 986456
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>emb|AL954194.8| Mouse DNA sequence from clone RP24-558L14 on chromosome 4, complete
            sequence
          Length = 34431

 Score = 40.1 bits (20), Expect = 7.0
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 174  tgctttgtctccaaactatt 193
            ||||||||||||||||||||
Sbjct: 2143 tgctttgtctccaaactatt 2162


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,460,048
Number of Sequences: 3902068
Number of extensions: 4460048
Number of successful extensions: 84180
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 44
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 84014
Number of HSP's gapped (non-prelim): 160
length of query: 516
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 493
effective length of database: 17,143,297,704
effective search space: 8451645768072
effective search space used: 8451645768072
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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