| Clone Name | baal31i07 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK103864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149F01, full insert sequence Length = 2875 Score = 305 bits (154), Expect = 6e-80 Identities = 357/424 (84%), Gaps = 1/424 (0%) Strand = Plus / Plus Query: 3 cagggtcaattgaaagacgataactatattttacacatcaaaaccatatacaattcttag 62 |||| |||||| ||||| || ||||||||| | ||||||||||||||||| ||||| || Sbjct: 1081 caggatcaattaaaagatgagaactatattgtt-acatcaaaaccatatacgattctcag 1139 Query: 63 cgatcagttacatcatctgaatgctgagatagaacgatacaagggtttggttgaagtatt 122 || |||||||| |||||||||||||||||||| ||||||| ||| || |||||||| | Sbjct: 1140 tgaccagttacaccatctgaatgctgagatagagcgatacagggggttagttgaagtgct 1199 Query: 123 acagaatgataagaaccagttcttgcaaagggagaaagaaatgtgtgcaaaaggagaatc 182 ||||||||| ||| ||||| || |||||| ||| |||||||| |||||| | |||||| Sbjct: 1200 acagaatgaaaaggaccagctcatgcaaaaggaagaagaaatgcttgcaaaggcagaatc 1259 Query: 183 tgtcgacaatattaaacaatccattaccgcttatgaggccaaaatcgaagaactggaaca 242 || ||| | || |||||||||||||| |||| |||||||||| || || |||||||| Sbjct: 1260 agtggacgctgttcaacaatccattaccacttacaaggccaaaattgaggacctggaaca 1319 Query: 243 tcagattctaaaatccatgtctgagaagaatgatcttgagatcaaagttgaggaatcatt 302 | | || | ||| ||| |||| |||||||||||||||||||| | ||||||| | || Sbjct: 1320 tgaaatccagaaacttatggctgaaaagaatgatcttgagatcaaggctgaggaagcctt 1379 Query: 303 gcaagattcaggtaaaaaagacttcaaggatgagattcatgtcatggctgcagcgctttc 362 |||||||||||| ||||||||||||||||| ||||||||||| ||||||||| | || || Sbjct: 1380 gcaagattcagggaaaaaagacttcaaggacgagattcatgttatggctgcatcactctc 1439 Query: 363 caaagagatggaaatgatgganaatcaattgaatagatcaaaggatgcggnttctgaagc 422 ||||||||||||| || |||| |||||| |||||||||| |||||||||| ||||||||| Sbjct: 1440 caaagagatggaattgttggacaatcaaatgaatagatccaaggatgcggcttctgaagc 1499 Query: 423 actt 426 |||| Sbjct: 1500 actt 1503
>ref|NM_197787.1| Oryza sativa (japonica cultivar-group) unknown protein (OSJNBa0057L21.5), mRNA Length = 2787 Score = 194 bits (98), Expect = 2e-46 Identities = 147/164 (89%) Strand = Plus / Plus Query: 263 ctgagaagaatgatcttgagatcaaagttgaggaatcattgcaagattcaggtaaaaaag 322 |||| |||||||||||||||||||| | ||||||| | |||||||||||||| ||||||| Sbjct: 1210 ctgaaaagaatgatcttgagatcaaggctgaggaagccttgcaagattcagggaaaaaag 1269 Query: 323 acttcaaggatgagattcatgtcatggctgcagcgctttccaaagagatggaaatgatgg 382 |||||||||| ||||||||||| ||||||||| | || ||||||||||||||| || ||| Sbjct: 1270 acttcaaggacgagattcatgttatggctgcatcactctccaaagagatggaattgttgg 1329 Query: 383 anaatcaattgaatagatcaaaggatgcggnttctgaagcactt 426 | |||||| |||||||||| |||||||||| ||||||||||||| Sbjct: 1330 acaatcaaatgaatagatccaaggatgcggcttctgaagcactt 1373 Score = 97.6 bits (49), Expect = 3e-17 Identities = 101/117 (86%), Gaps = 1/117 (0%) Strand = Plus / Plus Query: 3 cagggtcaattgaaagacgataactatattttacacatcaaaaccatatacaattcttag 62 |||| |||||| ||||| || ||||||||| | ||||||||||||||||| ||||| || Sbjct: 1044 caggatcaattaaaagatgagaactatattgtt-acatcaaaaccatatacgattctcag 1102 Query: 63 cgatcagttacatcatctgaatgctgagatagaacgatacaagggtttggttgaagt 119 || |||||||| |||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 1103 tgaccagttacaccatctgaatgctgagatagagcgatacagggggttagttgaagt 1159
>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete sequence Length = 183046 Score = 137 bits (69), Expect = 3e-29 Identities = 100/111 (90%) Strand = Plus / Minus Query: 316 aaaaaagacttcaaggatgagattcatgtcatggctgcagcgctttccaaagagatggaa 375 ||||||||||||||||| ||||||||||| ||||||||| | || ||||||||||||||| Sbjct: 136506 aaaaaagacttcaaggacgagattcatgttatggctgcatcactctccaaagagatggaa 136447 Query: 376 atgatgganaatcaattgaatagatcaaaggatgcggnttctgaagcactt 426 || |||| |||||| |||||||||| |||||||||| ||||||||||||| Sbjct: 136446 ttgttggacaatcaaatgaatagatccaaggatgcggcttctgaagcactt 136396 Score = 101 bits (51), Expect = 2e-18 Identities = 103/119 (86%), Gaps = 1/119 (0%) Strand = Plus / Minus Query: 1 tgcagggtcaattgaaagacgataactatattttacacatcaaaaccatatacaattctt 60 |||||| |||||| ||||| || ||||||||| | ||||||||||||||||| ||||| Sbjct: 137011 tgcaggatcaattaaaagatgagaactatattgtt-acatcaaaaccatatacgattctc 136953 Query: 61 agcgatcagttacatcatctgaatgctgagatagaacgatacaagggtttggttgaagt 119 || || |||||||| |||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 136952 agtgaccagttacaccatctgaatgctgagatagagcgatacagggggttagttgaagt 136894 Score = 87.7 bits (44), Expect = 3e-14 Identities = 155/192 (80%) Strand = Plus / Minus Query: 125 agaatgataagaaccagttcttgcaaagggagaaagaaatgtgtgcaaaaggagaatctg 184 ||||||| ||| ||||| || |||||| ||| |||||||| |||||| | |||||| | Sbjct: 136795 agaatgaaaaggaccagctcatgcaaaaggaagaagaaatgcttgcaaaggcagaatcag 136736 Query: 185 tcgacaatattaaacaatccattaccgcttatgaggccaaaatcgaagaactggaacatc 244 | ||| | || |||||||||||||| |||| |||||||||| || || ||||||||| Sbjct: 136735 tggacgctgttcaacaatccattaccacttacaaggccaaaattgaggacctggaacatg 136676 Query: 245 agattctaaaatccatgtctgagaagaatgatcttgagatcaaagttgaggaatcattgc 304 | || | ||| ||| |||| |||||||||||||||||||| | ||||||| | |||| Sbjct: 136675 aaatccagaaacttatggctgaaaagaatgatcttgagatcaaggctgaggaagccttgc 136616 Query: 305 aagattcaggta 316 |||||||||||| Sbjct: 136615 aagattcaggta 136604
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 137 bits (69), Expect = 3e-29 Identities = 100/111 (90%) Strand = Plus / Plus Query: 316 aaaaaagacttcaaggatgagattcatgtcatggctgcagcgctttccaaagagatggaa 375 ||||||||||||||||| ||||||||||| ||||||||| | || ||||||||||||||| Sbjct: 21871815 aaaaaagacttcaaggacgagattcatgttatggctgcatcactctccaaagagatggaa 21871874 Query: 376 atgatgganaatcaattgaatagatcaaaggatgcggnttctgaagcactt 426 || |||| |||||| |||||||||| |||||||||| ||||||||||||| Sbjct: 21871875 ttgttggacaatcaaatgaatagatccaaggatgcggcttctgaagcactt 21871925 Score = 101 bits (51), Expect = 2e-18 Identities = 103/119 (86%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 1 tgcagggtcaattgaaagacgataactatattttacacatcaaaaccatatacaattctt 60 |||||| |||||| ||||| || ||||||||| | ||||||||||||||||| ||||| Sbjct: 21871310 tgcaggatcaattaaaagatgagaactatattgtt-acatcaaaaccatatacgattctc 21871368 Query: 61 agcgatcagttacatcatctgaatgctgagatagaacgatacaagggtttggttgaagt 119 || || |||||||| |||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 21871369 agtgaccagttacaccatctgaatgctgagatagagcgatacagggggttagttgaagt 21871427 Score = 87.7 bits (44), Expect = 3e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 125 agaatgataagaaccagttcttgcaaagggagaaagaaatgtgtgcaaaaggagaatctg 184 ||||||| ||| ||||| || |||||| ||| |||||||| |||||| | |||||| | Sbjct: 21871526 agaatgaaaaggaccagctcatgcaaaaggaagaagaaatgcttgcaaaggcagaatcag 21871585 Query: 185 tcgacaatattaaacaatccattaccgcttatgaggccaaaatcgaagaactggaacatc 244 | ||| | || |||||||||||||| |||| |||||||||| || || ||||||||| Sbjct: 21871586 tggacgctgttcaacaatccattaccacttacaaggccaaaattgaggacctggaacatg 21871645 Query: 245 agattctaaaatccatgtctgagaagaatgatcttgagatcaaagttgaggaatcattgc 304 | || | ||| ||| |||| |||||||||||||||||||| | ||||||| | |||| Sbjct: 21871646 aaatccagaaacttatggctgaaaagaatgatcttgagatcaaggctgaggaagccttgc 21871705 Query: 305 aagattcaggta 316 |||||||||||| Sbjct: 21871706 aagattcaggta 21871717
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 137 bits (69), Expect = 3e-29 Identities = 100/111 (90%) Strand = Plus / Plus Query: 316 aaaaaagacttcaaggatgagattcatgtcatggctgcagcgctttccaaagagatggaa 375 ||||||||||||||||| ||||||||||| ||||||||| | || ||||||||||||||| Sbjct: 21883478 aaaaaagacttcaaggacgagattcatgttatggctgcatcactctccaaagagatggaa 21883537 Query: 376 atgatgganaatcaattgaatagatcaaaggatgcggnttctgaagcactt 426 || |||| |||||| |||||||||| |||||||||| ||||||||||||| Sbjct: 21883538 ttgttggacaatcaaatgaatagatccaaggatgcggcttctgaagcactt 21883588 Score = 101 bits (51), Expect = 2e-18 Identities = 103/119 (86%), Gaps = 1/119 (0%) Strand = Plus / Plus Query: 1 tgcagggtcaattgaaagacgataactatattttacacatcaaaaccatatacaattctt 60 |||||| |||||| ||||| || ||||||||| | ||||||||||||||||| ||||| Sbjct: 21882973 tgcaggatcaattaaaagatgagaactatattgtt-acatcaaaaccatatacgattctc 21883031 Query: 61 agcgatcagttacatcatctgaatgctgagatagaacgatacaagggtttggttgaagt 119 || || |||||||| |||||||||||||||||||| ||||||| ||| || |||||||| Sbjct: 21883032 agtgaccagttacaccatctgaatgctgagatagagcgatacagggggttagttgaagt 21883090 Score = 87.7 bits (44), Expect = 3e-14 Identities = 155/192 (80%) Strand = Plus / Plus Query: 125 agaatgataagaaccagttcttgcaaagggagaaagaaatgtgtgcaaaaggagaatctg 184 ||||||| ||| ||||| || |||||| ||| |||||||| |||||| | |||||| | Sbjct: 21883189 agaatgaaaaggaccagctcatgcaaaaggaagaagaaatgcttgcaaaggcagaatcag 21883248 Query: 185 tcgacaatattaaacaatccattaccgcttatgaggccaaaatcgaagaactggaacatc 244 | ||| | || |||||||||||||| |||| |||||||||| || || ||||||||| Sbjct: 21883249 tggacgctgttcaacaatccattaccacttacaaggccaaaattgaggacctggaacatg 21883308 Query: 245 agattctaaaatccatgtctgagaagaatgatcttgagatcaaagttgaggaatcattgc 304 | || | ||| ||| |||| |||||||||||||||||||| | ||||||| | |||| Sbjct: 21883309 aaatccagaaacttatggctgaaaagaatgatcttgagatcaaggctgaggaagccttgc 21883368 Query: 305 aagattcaggta 316 |||||||||||| Sbjct: 21883369 aagattcaggta 21883380
>gb|AC114490.2| Homo sapiens chromosome 1 clone RP11-244H3, complete sequence Length = 152428 Score = 44.1 bits (22), Expect = 0.37 Identities = 22/22 (100%) Strand = Plus / Plus Query: 310 tcaggtaaaaaagacttcaagg 331 |||||||||||||||||||||| Sbjct: 8229 tcaggtaaaaaagacttcaagg 8250
>ref|XM_419158.1| PREDICTED: Gallus gallus similar to retinoblastoma binding protein 8 isoform a; CTBP-interacting protein; retinoblastoma-interacting myosin-like; retinoblastoma-binding protein 8 (LOC421071), mRNA Length = 3989 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 100 tacaagggtttggttgaagta 120 ||||||||||||||||||||| Sbjct: 2102 tacaagggtttggttgaagta 2082
>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence Length = 152927 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Minus Query: 235 ctggaacatcagattctaaaa 255 ||||||||||||||||||||| Sbjct: 141590 ctggaacatcagattctaaaa 141570
>gb|AC026124.35| Homo sapiens 12 BAC RP11-305O6 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 181835 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 159 agaaatgtgtgcaaaaggaga 179 ||||||||||||||||||||| Sbjct: 109532 agaaatgtgtgcaaaaggaga 109552
>gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.58_E_17, complete sequence Length = 286758 Score = 42.1 bits (21), Expect = 1.4 Identities = 21/21 (100%) Strand = Plus / Plus Query: 358 ctttccaaagagatggaaatg 378 ||||||||||||||||||||| Sbjct: 139566 ctttccaaagagatggaaatg 139586
>gb|AC122560.8| Mus musculus chromosome 15, clone RP24-93E14, complete sequence Length = 174003 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 283 atcaaagttgaggaatcatt 302 |||||||||||||||||||| Sbjct: 156748 atcaaagttgaggaatcatt 156767
>ref|NM_104398.1| Arabidopsis thaliana unknown protein AT1G55250 mRNA, complete cds Length = 1569 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 364 aaagagatggaaatgatgga 383 |||||||||||||||||||| Sbjct: 1453 aaagagatggaaatgatgga 1472
>gb|AY521552.1| Cancer magister clone Cma2 microsatellite sequence Length = 302 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 145 ttgcaaagggagaaagaaatgtgt 168 ||||||||||||||| |||||||| Sbjct: 97 ttgcaaagggagaaataaatgtgt 120
>gb|AC068605.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-284I15, complete sequence Length = 198551 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 119 tattacagaatgataagaac 138 |||||||||||||||||||| Sbjct: 26918 tattacagaatgataagaac 26899
>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome Length = 6397126 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 aggccaaaatcgaagaactg 237 |||||||||||||||||||| Sbjct: 1712080 aggccaaaatcgaagaactg 1712099
>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome Length = 6093698 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 218 aggccaaaatcgaagaactg 237 |||||||||||||||||||| Sbjct: 1541716 aggccaaaatcgaagaactg 1541735
>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome Length = 5928787 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 218 aggccaaaatcgaagaactg 237 |||||||||||||||||||| Sbjct: 4377187 aggccaaaatcgaagaactg 4377168
>gb|AC121497.15| Mus musculus chromosome 6, clone RP23-2M23, complete sequence Length = 231059 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 119 tattacagaatgataagaac 138 |||||||||||||||||||| Sbjct: 128913 tattacagaatgataagaac 128932
>emb|BX323464.18| Zebrafish DNA sequence from clone CH211-93E11 in linkage group 12, complete sequence Length = 167058 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 ggtcaattgaaagacgataactat 29 ||||||||||||||| |||||||| Sbjct: 94805 ggtcaattgaaagaccataactat 94782
>gb|U13645.1| Caenorhabditis elegans cosmid C05D10, complete sequence Length = 42313 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 385 aatcaattgaatagatcaaa 404 |||||||||||||||||||| Sbjct: 11037 aatcaattgaatagatcaaa 11018
>emb|AL136375.6| Human DNA sequence from clone RP11-95B22 on chromosome 1q31.1-31.3 Contains STSs and GSSs, complete sequence Length = 57629 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 27 tatattttacacatcaaaac 46 |||||||||||||||||||| Sbjct: 55148 tatattttacacatcaaaac 55167
>gb|AC093311.2| Homo sapiens chromosome 5 clone RP11-461G12, complete sequence Length = 178887 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 263 ctgagaagaatgatcttgag 282 |||||||||||||||||||| Sbjct: 53206 ctgagaagaatgatcttgag 53187
>emb|BX001032.12| Zebrafish DNA sequence from clone CH211-14K18 in linkage group 12, complete sequence Length = 162109 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Minus Query: 6 ggtcaattgaaagacgataactat 29 ||||||||||||||| |||||||| Sbjct: 97011 ggtcaattgaaagaccataactat 96988
>gb|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 BAC F7A10 genomic sequence, complete sequence Length = 101954 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 364 aaagagatggaaatgatgga 383 |||||||||||||||||||| Sbjct: 68834 aaagagatggaaatgatgga 68815
>dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSH12 Length = 79259 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Minus Query: 300 attgcaagattcaggtaaaa 319 |||||||||||||||||||| Sbjct: 68717 attgcaagattcaggtaaaa 68698
>ref|XM_308319.2| Anopheles gambiae str. PEST ENSANGP00000010764 (ENSANGG00000008275), partial mRNA Length = 1662 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 270 gaatgatcttgagatcaaag 289 |||||||||||||||||||| Sbjct: 1437 gaatgatcttgagatcaaag 1456
>emb|AL354046.5|HS121M24 Homo sapiens chromosome 17 from PAC RPCI-1 121M24 map 17p11. region D17S842-D17S953, complete sequence Length = 185415 Score = 40.1 bits (20), Expect = 5.7 Identities = 25/27 (92%) Strand = Plus / Plus Query: 364 aaagagatggaaatgatgganaatcaa 390 |||||||||||||||||| | |||||| Sbjct: 42496 aaagagatggaaatgatgaagaatcaa 42522
>gb|AC006251.3|AC006251 Homo sapiens chromosome 17, clone hRPK.692_E_18, complete sequence Length = 125099 Score = 40.1 bits (20), Expect = 5.7 Identities = 25/27 (92%) Strand = Plus / Minus Query: 364 aaagagatggaaatgatgganaatcaa 390 |||||||||||||||||| | |||||| Sbjct: 48247 aaagagatggaaatgatgaagaatcaa 48221
>gb|DQ221253.1| Danio rerio voltage-gated sodium channel Nav1.4a (Nav1.4a) gene, complete cds Length = 26428 Score = 40.1 bits (20), Expect = 5.7 Identities = 23/24 (95%) Strand = Plus / Plus Query: 6 ggtcaattgaaagacgataactat 29 ||||||||||||||| |||||||| Sbjct: 21502 ggtcaattgaaagaccataactat 21525
>gb|DQ302199.1| Brachycoluma sp. TN-2005 cytochrome oxidase subunit I (CoI) gene, partial cds; mitochondrial Length = 810 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 caagattcaggtaaaaaaga 323 |||||||||||||||||||| Sbjct: 496 caagattcaggtaaaaaaga 515
>gb|DQ302198.1| Brachycoluma viduata cytochrome oxidase subunit I (CoI) gene, partial cds; mitochondrial Length = 810 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 caagattcaggtaaaaaaga 323 |||||||||||||||||||| Sbjct: 496 caagattcaggtaaaaaaga 515
>gb|DQ302194.1| Pachynematus kirbyi cytochrome oxidase subunit I (CoI) gene, partial cds; mitochondrial Length = 810 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 304 caagattcaggtaaaaaaga 323 |||||||||||||||||||| Sbjct: 496 caagattcaggtaaaaaaga 515
>dbj|AP006405.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08E06, TM0296a, complete sequence Length = 66228 Score = 40.1 bits (20), Expect = 5.7 Identities = 20/20 (100%) Strand = Plus / Plus Query: 250 ctaaaatccatgtctgagaa 269 |||||||||||||||||||| Sbjct: 10423 ctaaaatccatgtctgagaa 10442 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,532,477 Number of Sequences: 3902068 Number of extensions: 4532477 Number of successful extensions: 92518 Number of sequences better than 10.0: 33 Number of HSP's better than 10.0 without gapping: 33 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 92392 Number of HSP's gapped (non-prelim): 126 length of query: 426 length of database: 17,233,045,268 effective HSP length: 22 effective length of query: 404 effective length of database: 17,147,199,772 effective search space: 6927468707888 effective search space used: 6927468707888 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)