ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal31i07
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1dbj|AK103864.1| Oryza sativa (japonica cultivar-group) cDNA clon... 305 6e-80
2ref|NM_197787.1| Oryza sativa (japonica cultivar-group) unknown ... 194 2e-46
3gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 gen... 137 3e-29
4dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic D... 137 3e-29
5gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome... 137 3e-29
6gb|AC114490.2| Homo sapiens chromosome 1 clone RP11-244H3, compl... 44 0.37
7ref|XM_419158.1| PREDICTED: Gallus gallus similar to retinoblast... 42 1.4
8gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete... 42 1.4
9gb|AC026124.35| Homo sapiens 12 BAC RP11-305O6 (Roswell Park Can... 42 1.4
10gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.5... 42 1.4
11gb|AC122560.8| Mus musculus chromosome 15, clone RP24-93E14, com... 40 5.7
12ref|NM_104398.1| Arabidopsis thaliana unknown protein AT1G55250 ... 40 5.7
13gb|AY521552.1| Cancer magister clone Cma2 microsatellite sequence 40 5.7
14gb|AC068605.4| Mus musculus strain C57BL6/J chromosome 6 clone R... 40 5.7
15gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 compl... 40 5.7
16gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete... 40 5.7
17gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, comp... 40 5.7
18gb|AC121497.15| Mus musculus chromosome 6, clone RP23-2M23, comp... 40 5.7
19emb|BX323464.18| Zebrafish DNA sequence from clone CH211-93E11 i... 40 5.7
20gb|U13645.1| Caenorhabditis elegans cosmid C05D10, complete sequ... 40 5.7
21emb|AL136375.6| Human DNA sequence from clone RP11-95B22 on chro... 40 5.7
22gb|AC093311.2| Homo sapiens chromosome 5 clone RP11-461G12, comp... 40 5.7
23emb|BX001032.12| Zebrafish DNA sequence from clone CH211-14K18 i... 40 5.7
24gb|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 BAC F7... 40 5.7
25dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, ... 40 5.7
26ref|XM_308319.2| Anopheles gambiae str. PEST ENSANGP00000010764 ... 40 5.7
27emb|AL354046.5|HS121M24 Homo sapiens chromosome 17 from PAC RPC... 40 5.7
28gb|AC006251.3|AC006251 Homo sapiens chromosome 17, clone hRPK.69... 40 5.7
29gb|DQ221253.1| Danio rerio voltage-gated sodium channel Nav1.4a ... 40 5.7
30gb|DQ302199.1| Brachycoluma sp. TN-2005 cytochrome oxidase subun... 40 5.7
31gb|DQ302198.1| Brachycoluma viduata cytochrome oxidase subunit I... 40 5.7
32gb|DQ302194.1| Pachynematus kirbyi cytochrome oxidase subunit I ... 40 5.7
33dbj|AP006405.1| Lotus japonicus genomic DNA, chromosome 4, clone... 40 5.7

>dbj|AK103864.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033149F01, full
            insert sequence
          Length = 2875

 Score =  305 bits (154), Expect = 6e-80
 Identities = 357/424 (84%), Gaps = 1/424 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagggtcaattgaaagacgataactatattttacacatcaaaaccatatacaattcttag 62
            |||| |||||| ||||| || ||||||||| |  ||||||||||||||||| ||||| ||
Sbjct: 1081 caggatcaattaaaagatgagaactatattgtt-acatcaaaaccatatacgattctcag 1139

                                                                        
Query: 63   cgatcagttacatcatctgaatgctgagatagaacgatacaagggtttggttgaagtatt 122
             || |||||||| |||||||||||||||||||| ||||||| ||| || ||||||||  |
Sbjct: 1140 tgaccagttacaccatctgaatgctgagatagagcgatacagggggttagttgaagtgct 1199

                                                                        
Query: 123  acagaatgataagaaccagttcttgcaaagggagaaagaaatgtgtgcaaaaggagaatc 182
            ||||||||| ||| ||||| || |||||| |||  ||||||||  |||||| | ||||||
Sbjct: 1200 acagaatgaaaaggaccagctcatgcaaaaggaagaagaaatgcttgcaaaggcagaatc 1259

                                                                        
Query: 183  tgtcgacaatattaaacaatccattaccgcttatgaggccaaaatcgaagaactggaaca 242
             || |||  | || |||||||||||||| ||||  |||||||||| || || ||||||||
Sbjct: 1260 agtggacgctgttcaacaatccattaccacttacaaggccaaaattgaggacctggaaca 1319

                                                                        
Query: 243  tcagattctaaaatccatgtctgagaagaatgatcttgagatcaaagttgaggaatcatt 302
            | | || |  |||   ||| |||| |||||||||||||||||||| | ||||||| | ||
Sbjct: 1320 tgaaatccagaaacttatggctgaaaagaatgatcttgagatcaaggctgaggaagcctt 1379

                                                                        
Query: 303  gcaagattcaggtaaaaaagacttcaaggatgagattcatgtcatggctgcagcgctttc 362
            |||||||||||| ||||||||||||||||| ||||||||||| ||||||||| | || ||
Sbjct: 1380 gcaagattcagggaaaaaagacttcaaggacgagattcatgttatggctgcatcactctc 1439

                                                                        
Query: 363  caaagagatggaaatgatgganaatcaattgaatagatcaaaggatgcggnttctgaagc 422
            ||||||||||||| || |||| |||||| |||||||||| |||||||||| |||||||||
Sbjct: 1440 caaagagatggaattgttggacaatcaaatgaatagatccaaggatgcggcttctgaagc 1499

                
Query: 423  actt 426
            ||||
Sbjct: 1500 actt 1503



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>ref|NM_197787.1| Oryza sativa (japonica cultivar-group) unknown protein
            (OSJNBa0057L21.5), mRNA
          Length = 2787

 Score =  194 bits (98), Expect = 2e-46
 Identities = 147/164 (89%)
 Strand = Plus / Plus

                                                                        
Query: 263  ctgagaagaatgatcttgagatcaaagttgaggaatcattgcaagattcaggtaaaaaag 322
            |||| |||||||||||||||||||| | ||||||| | |||||||||||||| |||||||
Sbjct: 1210 ctgaaaagaatgatcttgagatcaaggctgaggaagccttgcaagattcagggaaaaaag 1269

                                                                        
Query: 323  acttcaaggatgagattcatgtcatggctgcagcgctttccaaagagatggaaatgatgg 382
            |||||||||| ||||||||||| ||||||||| | || ||||||||||||||| || |||
Sbjct: 1270 acttcaaggacgagattcatgttatggctgcatcactctccaaagagatggaattgttgg 1329

                                                        
Query: 383  anaatcaattgaatagatcaaaggatgcggnttctgaagcactt 426
            | |||||| |||||||||| |||||||||| |||||||||||||
Sbjct: 1330 acaatcaaatgaatagatccaaggatgcggcttctgaagcactt 1373



 Score = 97.6 bits (49), Expect = 3e-17
 Identities = 101/117 (86%), Gaps = 1/117 (0%)
 Strand = Plus / Plus

                                                                        
Query: 3    cagggtcaattgaaagacgataactatattttacacatcaaaaccatatacaattcttag 62
            |||| |||||| ||||| || ||||||||| |  ||||||||||||||||| ||||| ||
Sbjct: 1044 caggatcaattaaaagatgagaactatattgtt-acatcaaaaccatatacgattctcag 1102

                                                                     
Query: 63   cgatcagttacatcatctgaatgctgagatagaacgatacaagggtttggttgaagt 119
             || |||||||| |||||||||||||||||||| ||||||| ||| || ||||||||
Sbjct: 1103 tgaccagttacaccatctgaatgctgagatagagcgatacagggggttagttgaagt 1159



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>gb|AC087599.14| Oryza sativa chromosome 10 BAC OSJNBa0057L21 genomic sequence, complete
              sequence
          Length = 183046

 Score =  137 bits (69), Expect = 3e-29
 Identities = 100/111 (90%)
 Strand = Plus / Minus

                                                                          
Query: 316    aaaaaagacttcaaggatgagattcatgtcatggctgcagcgctttccaaagagatggaa 375
              ||||||||||||||||| ||||||||||| ||||||||| | || |||||||||||||||
Sbjct: 136506 aaaaaagacttcaaggacgagattcatgttatggctgcatcactctccaaagagatggaa 136447

                                                                 
Query: 376    atgatgganaatcaattgaatagatcaaaggatgcggnttctgaagcactt 426
               || |||| |||||| |||||||||| |||||||||| |||||||||||||
Sbjct: 136446 ttgttggacaatcaaatgaatagatccaaggatgcggcttctgaagcactt 136396



 Score =  101 bits (51), Expect = 2e-18
 Identities = 103/119 (86%), Gaps = 1/119 (0%)
 Strand = Plus / Minus

                                                                          
Query: 1      tgcagggtcaattgaaagacgataactatattttacacatcaaaaccatatacaattctt 60
              |||||| |||||| ||||| || ||||||||| |  ||||||||||||||||| ||||| 
Sbjct: 137011 tgcaggatcaattaaaagatgagaactatattgtt-acatcaaaaccatatacgattctc 136953

                                                                         
Query: 61     agcgatcagttacatcatctgaatgctgagatagaacgatacaagggtttggttgaagt 119
              || || |||||||| |||||||||||||||||||| ||||||| ||| || ||||||||
Sbjct: 136952 agtgaccagttacaccatctgaatgctgagatagagcgatacagggggttagttgaagt 136894



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 155/192 (80%)
 Strand = Plus / Minus

                                                                          
Query: 125    agaatgataagaaccagttcttgcaaagggagaaagaaatgtgtgcaaaaggagaatctg 184
              ||||||| ||| ||||| || |||||| |||  ||||||||  |||||| | |||||| |
Sbjct: 136795 agaatgaaaaggaccagctcatgcaaaaggaagaagaaatgcttgcaaaggcagaatcag 136736

                                                                          
Query: 185    tcgacaatattaaacaatccattaccgcttatgaggccaaaatcgaagaactggaacatc 244
              | |||  | || |||||||||||||| ||||  |||||||||| || || ||||||||| 
Sbjct: 136735 tggacgctgttcaacaatccattaccacttacaaggccaaaattgaggacctggaacatg 136676

                                                                          
Query: 245    agattctaaaatccatgtctgagaagaatgatcttgagatcaaagttgaggaatcattgc 304
              | || |  |||   ||| |||| |||||||||||||||||||| | ||||||| | ||||
Sbjct: 136675 aaatccagaaacttatggctgaaaagaatgatcttgagatcaaggctgaggaagccttgc 136616

                          
Query: 305    aagattcaggta 316
              ||||||||||||
Sbjct: 136615 aagattcaggta 136604



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>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete
                sequence
          Length = 22685906

 Score =  137 bits (69), Expect = 3e-29
 Identities = 100/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 316      aaaaaagacttcaaggatgagattcatgtcatggctgcagcgctttccaaagagatggaa 375
                ||||||||||||||||| ||||||||||| ||||||||| | || |||||||||||||||
Sbjct: 21871815 aaaaaagacttcaaggacgagattcatgttatggctgcatcactctccaaagagatggaa 21871874

                                                                   
Query: 376      atgatgganaatcaattgaatagatcaaaggatgcggnttctgaagcactt 426
                 || |||| |||||| |||||||||| |||||||||| |||||||||||||
Sbjct: 21871875 ttgttggacaatcaaatgaatagatccaaggatgcggcttctgaagcactt 21871925



 Score =  101 bits (51), Expect = 2e-18
 Identities = 103/119 (86%), Gaps = 1/119 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        tgcagggtcaattgaaagacgataactatattttacacatcaaaaccatatacaattctt 60
                |||||| |||||| ||||| || ||||||||| |  ||||||||||||||||| ||||| 
Sbjct: 21871310 tgcaggatcaattaaaagatgagaactatattgtt-acatcaaaaccatatacgattctc 21871368

                                                                           
Query: 61       agcgatcagttacatcatctgaatgctgagatagaacgatacaagggtttggttgaagt 119
                || || |||||||| |||||||||||||||||||| ||||||| ||| || ||||||||
Sbjct: 21871369 agtgaccagttacaccatctgaatgctgagatagagcgatacagggggttagttgaagt 21871427



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 155/192 (80%)
 Strand = Plus / Plus

                                                                            
Query: 125      agaatgataagaaccagttcttgcaaagggagaaagaaatgtgtgcaaaaggagaatctg 184
                ||||||| ||| ||||| || |||||| |||  ||||||||  |||||| | |||||| |
Sbjct: 21871526 agaatgaaaaggaccagctcatgcaaaaggaagaagaaatgcttgcaaaggcagaatcag 21871585

                                                                            
Query: 185      tcgacaatattaaacaatccattaccgcttatgaggccaaaatcgaagaactggaacatc 244
                | |||  | || |||||||||||||| ||||  |||||||||| || || ||||||||| 
Sbjct: 21871586 tggacgctgttcaacaatccattaccacttacaaggccaaaattgaggacctggaacatg 21871645

                                                                            
Query: 245      agattctaaaatccatgtctgagaagaatgatcttgagatcaaagttgaggaatcattgc 304
                | || |  |||   ||| |||| |||||||||||||||||||| | ||||||| | ||||
Sbjct: 21871646 aaatccagaaacttatggctgaaaagaatgatcttgagatcaaggctgaggaagccttgc 21871705

                            
Query: 305      aagattcaggta 316
                ||||||||||||
Sbjct: 21871706 aagattcaggta 21871717



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>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence
          Length = 22698374

 Score =  137 bits (69), Expect = 3e-29
 Identities = 100/111 (90%)
 Strand = Plus / Plus

                                                                            
Query: 316      aaaaaagacttcaaggatgagattcatgtcatggctgcagcgctttccaaagagatggaa 375
                ||||||||||||||||| ||||||||||| ||||||||| | || |||||||||||||||
Sbjct: 21883478 aaaaaagacttcaaggacgagattcatgttatggctgcatcactctccaaagagatggaa 21883537

                                                                   
Query: 376      atgatgganaatcaattgaatagatcaaaggatgcggnttctgaagcactt 426
                 || |||| |||||| |||||||||| |||||||||| |||||||||||||
Sbjct: 21883538 ttgttggacaatcaaatgaatagatccaaggatgcggcttctgaagcactt 21883588



 Score =  101 bits (51), Expect = 2e-18
 Identities = 103/119 (86%), Gaps = 1/119 (0%)
 Strand = Plus / Plus

                                                                            
Query: 1        tgcagggtcaattgaaagacgataactatattttacacatcaaaaccatatacaattctt 60
                |||||| |||||| ||||| || ||||||||| |  ||||||||||||||||| ||||| 
Sbjct: 21882973 tgcaggatcaattaaaagatgagaactatattgtt-acatcaaaaccatatacgattctc 21883031

                                                                           
Query: 61       agcgatcagttacatcatctgaatgctgagatagaacgatacaagggtttggttgaagt 119
                || || |||||||| |||||||||||||||||||| ||||||| ||| || ||||||||
Sbjct: 21883032 agtgaccagttacaccatctgaatgctgagatagagcgatacagggggttagttgaagt 21883090



 Score = 87.7 bits (44), Expect = 3e-14
 Identities = 155/192 (80%)
 Strand = Plus / Plus

                                                                            
Query: 125      agaatgataagaaccagttcttgcaaagggagaaagaaatgtgtgcaaaaggagaatctg 184
                ||||||| ||| ||||| || |||||| |||  ||||||||  |||||| | |||||| |
Sbjct: 21883189 agaatgaaaaggaccagctcatgcaaaaggaagaagaaatgcttgcaaaggcagaatcag 21883248

                                                                            
Query: 185      tcgacaatattaaacaatccattaccgcttatgaggccaaaatcgaagaactggaacatc 244
                | |||  | || |||||||||||||| ||||  |||||||||| || || ||||||||| 
Sbjct: 21883249 tggacgctgttcaacaatccattaccacttacaaggccaaaattgaggacctggaacatg 21883308

                                                                            
Query: 245      agattctaaaatccatgtctgagaagaatgatcttgagatcaaagttgaggaatcattgc 304
                | || |  |||   ||| |||| |||||||||||||||||||| | ||||||| | ||||
Sbjct: 21883309 aaatccagaaacttatggctgaaaagaatgatcttgagatcaaggctgaggaagccttgc 21883368

                            
Query: 305      aagattcaggta 316
                ||||||||||||
Sbjct: 21883369 aagattcaggta 21883380



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>gb|AC114490.2| Homo sapiens chromosome 1 clone RP11-244H3, complete sequence
          Length = 152428

 Score = 44.1 bits (22), Expect = 0.37
 Identities = 22/22 (100%)
 Strand = Plus / Plus

                                  
Query: 310  tcaggtaaaaaagacttcaagg 331
            ||||||||||||||||||||||
Sbjct: 8229 tcaggtaaaaaagacttcaagg 8250



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>ref|XM_419158.1| PREDICTED: Gallus gallus similar to retinoblastoma binding protein 8
            isoform a; CTBP-interacting protein;
            retinoblastoma-interacting myosin-like;
            retinoblastoma-binding protein 8 (LOC421071), mRNA
          Length = 3989

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                 
Query: 100  tacaagggtttggttgaagta 120
            |||||||||||||||||||||
Sbjct: 2102 tacaagggtttggttgaagta 2082



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>gb|AC004895.2| Homo sapiens PAC clone RP4-810E6 from 7, complete sequence
          Length = 152927

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Minus

                                   
Query: 235    ctggaacatcagattctaaaa 255
              |||||||||||||||||||||
Sbjct: 141590 ctggaacatcagattctaaaa 141570



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>gb|AC026124.35| Homo sapiens 12 BAC RP11-305O6 (Roswell Park Cancer Institute Human BAC
              Library) complete sequence
          Length = 181835

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 159    agaaatgtgtgcaaaaggaga 179
              |||||||||||||||||||||
Sbjct: 109532 agaaatgtgtgcaaaaggaga 109552



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>gb|AC006449.19|AC006449 Homo sapiens chromosome 17, clone hCIT.58_E_17, complete sequence
          Length = 286758

 Score = 42.1 bits (21), Expect = 1.4
 Identities = 21/21 (100%)
 Strand = Plus / Plus

                                   
Query: 358    ctttccaaagagatggaaatg 378
              |||||||||||||||||||||
Sbjct: 139566 ctttccaaagagatggaaatg 139586



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>gb|AC122560.8| Mus musculus chromosome 15, clone RP24-93E14, complete sequence
          Length = 174003

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 283    atcaaagttgaggaatcatt 302
              ||||||||||||||||||||
Sbjct: 156748 atcaaagttgaggaatcatt 156767



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>ref|NM_104398.1| Arabidopsis thaliana unknown protein AT1G55250 mRNA, complete cds
          Length = 1569

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 364  aaagagatggaaatgatgga 383
            ||||||||||||||||||||
Sbjct: 1453 aaagagatggaaatgatgga 1472



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>gb|AY521552.1| Cancer magister clone Cma2 microsatellite sequence
          Length = 302

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 145 ttgcaaagggagaaagaaatgtgt 168
           ||||||||||||||| ||||||||
Sbjct: 97  ttgcaaagggagaaataaatgtgt 120



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>gb|AC068605.4| Mus musculus strain C57BL6/J chromosome 6 clone RP23-284I15, complete
             sequence
          Length = 198551

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 119   tattacagaatgataagaac 138
             ||||||||||||||||||||
Sbjct: 26918 tattacagaatgataagaac 26899



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>gb|AE016853.1| Pseudomonas syringae pv. tomato str. DC3000 complete genome
          Length = 6397126

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 218     aggccaaaatcgaagaactg 237
               ||||||||||||||||||||
Sbjct: 1712080 aggccaaaatcgaagaactg 1712099



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>gb|CP000075.1| Pseudomonas syringae pv. syringae B728a, complete genome
          Length = 6093698

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 218     aggccaaaatcgaagaactg 237
               ||||||||||||||||||||
Sbjct: 1541716 aggccaaaatcgaagaactg 1541735



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>gb|CP000058.1| Pseudomonas syringae pv. phaseolicola 1448A, complete genome
          Length = 5928787

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 218     aggccaaaatcgaagaactg 237
               ||||||||||||||||||||
Sbjct: 4377187 aggccaaaatcgaagaactg 4377168



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>gb|AC121497.15| Mus musculus chromosome 6, clone RP23-2M23, complete sequence
          Length = 231059

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                  
Query: 119    tattacagaatgataagaac 138
              ||||||||||||||||||||
Sbjct: 128913 tattacagaatgataagaac 128932



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>emb|BX323464.18| Zebrafish DNA sequence from clone CH211-93E11 in linkage group 12,
             complete sequence
          Length = 167058

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 6     ggtcaattgaaagacgataactat 29
             ||||||||||||||| ||||||||
Sbjct: 94805 ggtcaattgaaagaccataactat 94782



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>gb|U13645.1| Caenorhabditis elegans cosmid C05D10, complete sequence
          Length = 42313

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 385   aatcaattgaatagatcaaa 404
             ||||||||||||||||||||
Sbjct: 11037 aatcaattgaatagatcaaa 11018



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>emb|AL136375.6| Human DNA sequence from clone RP11-95B22 on chromosome 1q31.1-31.3
             Contains STSs and GSSs, complete sequence
          Length = 57629

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 27    tatattttacacatcaaaac 46
             ||||||||||||||||||||
Sbjct: 55148 tatattttacacatcaaaac 55167



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>gb|AC093311.2| Homo sapiens chromosome 5 clone RP11-461G12, complete sequence
          Length = 178887

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 263   ctgagaagaatgatcttgag 282
             ||||||||||||||||||||
Sbjct: 53206 ctgagaagaatgatcttgag 53187



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>emb|BX001032.12| Zebrafish DNA sequence from clone CH211-14K18 in linkage group 12,
             complete sequence
          Length = 162109

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                     
Query: 6     ggtcaattgaaagacgataactat 29
             ||||||||||||||| ||||||||
Sbjct: 97011 ggtcaattgaaagaccataactat 96988



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>gb|AC027034.10|AC027034 Arabidopsis thaliana chromosome 1 BAC F7A10 genomic sequence, complete
             sequence
          Length = 101954

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 364   aaagagatggaaatgatgga 383
             ||||||||||||||||||||
Sbjct: 68834 aaagagatggaaatgatgga 68815



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>dbj|AB006704.1| Arabidopsis thaliana genomic DNA, chromosome 5, P1 clone:MSH12
          Length = 79259

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 300   attgcaagattcaggtaaaa 319
             ||||||||||||||||||||
Sbjct: 68717 attgcaagattcaggtaaaa 68698



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>ref|XM_308319.2| Anopheles gambiae str. PEST ENSANGP00000010764 (ENSANGG00000008275),
            partial mRNA
          Length = 1662

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 270  gaatgatcttgagatcaaag 289
            ||||||||||||||||||||
Sbjct: 1437 gaatgatcttgagatcaaag 1456



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>emb|AL354046.5|HS121M24 Homo sapiens chromosome 17 from PAC  RPCI-1 121M24 map 17p11. region
             D17S842-D17S953, complete sequence
          Length = 185415

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 25/27 (92%)
 Strand = Plus / Plus

                                        
Query: 364   aaagagatggaaatgatgganaatcaa 390
             |||||||||||||||||| | ||||||
Sbjct: 42496 aaagagatggaaatgatgaagaatcaa 42522



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>gb|AC006251.3|AC006251 Homo sapiens chromosome 17, clone hRPK.692_E_18, complete sequence
          Length = 125099

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 25/27 (92%)
 Strand = Plus / Minus

                                        
Query: 364   aaagagatggaaatgatgganaatcaa 390
             |||||||||||||||||| | ||||||
Sbjct: 48247 aaagagatggaaatgatgaagaatcaa 48221



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>gb|DQ221253.1| Danio rerio voltage-gated sodium channel Nav1.4a (Nav1.4a) gene,
             complete cds
          Length = 26428

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                     
Query: 6     ggtcaattgaaagacgataactat 29
             ||||||||||||||| ||||||||
Sbjct: 21502 ggtcaattgaaagaccataactat 21525



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>gb|DQ302199.1| Brachycoluma sp. TN-2005 cytochrome oxidase subunit I (CoI) gene,
           partial cds; mitochondrial
          Length = 810

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 caagattcaggtaaaaaaga 323
           ||||||||||||||||||||
Sbjct: 496 caagattcaggtaaaaaaga 515



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>gb|DQ302198.1| Brachycoluma viduata cytochrome oxidase subunit I (CoI) gene,
           partial cds; mitochondrial
          Length = 810

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 caagattcaggtaaaaaaga 323
           ||||||||||||||||||||
Sbjct: 496 caagattcaggtaaaaaaga 515



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>gb|DQ302194.1| Pachynematus kirbyi cytochrome oxidase subunit I (CoI) gene,
           partial cds; mitochondrial
          Length = 810

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 304 caagattcaggtaaaaaaga 323
           ||||||||||||||||||||
Sbjct: 496 caagattcaggtaaaaaaga 515



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>dbj|AP006405.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT08E06, TM0296a,
             complete sequence
          Length = 66228

 Score = 40.1 bits (20), Expect = 5.7
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 250   ctaaaatccatgtctgagaa 269
             ||||||||||||||||||||
Sbjct: 10423 ctaaaatccatgtctgagaa 10442


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,532,477
Number of Sequences: 3902068
Number of extensions: 4532477
Number of successful extensions: 92518
Number of sequences better than 10.0: 33
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 92392
Number of HSP's gapped (non-prelim): 126
length of query: 426
length of database: 17,233,045,268
effective HSP length: 22
effective length of query: 404
effective length of database: 17,147,199,772
effective search space: 6927468707888
effective search space used: 6927468707888
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)
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