ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal30p18 |
|---|---|
| Clone Library Name | barley_pub |
>PSBO_TOBAC (Q40459) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 249 bits (637), Expect = 2e-66 Identities = 122/133 (91%), Positives = 127/133 (95%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQLPG ERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVAL Sbjct: 200 TVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 259 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 PAGGRGDEEEL KENVKN SSSTG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PK Sbjct: 260 PAGGRGDEEELQKENVKNTSSSTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPK 319 Query: 363 DVKIQGVWYAQLE 401 DVKIQG+WYAQLE Sbjct: 320 DVKIQGIWYAQLE 332
>PSBO_FRIAG (O49079) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 248 bits (634), Expect = 5e-66 Identities = 121/133 (90%), Positives = 127/133 (95%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQLPG ERVPFLFTVKQLVATGKPESFSG +LVPSYRGSSFLDPKGRGGS GYDNAVAL Sbjct: 197 TVQLPGGERVPFLFTVKQLVATGKPESFSGSYLVPSYRGSSFLDPKGRGGSAGYDNAVAL 256 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 PAGGRGDEEEL KEN+K+ SSSTG ITLSVTKSKPETGEVIGVFES+QPSDTDLG+KAPK Sbjct: 257 PAGGRGDEEELVKENIKDVSSSTGKITLSVTKSKPETGEVIGVFESIQPSDTDLGSKAPK 316 Query: 363 DVKIQGVWYAQLE 401 DVKIQG+WYAQLE Sbjct: 317 DVKIQGIWYAQLE 329
>PSBO_LYCES (P23322) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 246 bits (628), Expect = 3e-65 Identities = 120/133 (90%), Positives = 126/133 (94%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQLPG ERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVAL Sbjct: 197 TVQLPGGERVPFLFTIKQLVASGKPESFSGEFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 256 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 PAGGRGDEEEL KENVKN +S TG ITLSVT+SKPETGEVIGVFES+QPSDTDLGAK PK Sbjct: 257 PAGGRGDEEELQKENVKNTASLTGKITLSVTQSKPETGEVIGVFESIQPSDTDLGAKVPK 316 Query: 363 DVKIQGVWYAQLE 401 DVKIQG+WYAQLE Sbjct: 317 DVKIQGIWYAQLE 329
>PSBO_PEA (P14226) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 329 Score = 242 bits (618), Expect = 4e-64 Identities = 119/134 (88%), Positives = 127/134 (94%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQLPG ERVPFLFT+KQLVA+GKP+SFSG FLVPSYRGSSFLDPKGRG STGYDNAVAL Sbjct: 196 TVQLPGGERVPFLFTIKQLVASGKPDSFSGEFLVPSYRGSSFLDPKGRGASTGYDNAVAL 255 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 PAGGRGDEEEL KEN K+A+SS G ITLSVT++KPETGEVIGVFES+QPSDTDLGAKAPK Sbjct: 256 PAGGRGDEEELGKENNKSAASSKGKITLSVTQTKPETGEVIGVFESIQPSDTDLGAKAPK 315 Query: 363 DVKIQGVWYAQLES 404 DVKIQGVWYAQLES Sbjct: 316 DVKIQGVWYAQLES 329
>PSBO2_ARATH (Q9S841) Oxygen-evolving enhancer protein 1-2, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 331 Score = 241 bits (615), Expect = 9e-64 Identities = 117/133 (87%), Positives = 124/133 (93%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQLPG ERVPFLFTVKQL A+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVAL Sbjct: 199 TVQLPGGERVPFLFTVKQLEASGKPESFSGKFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 258 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 PAGGRGDEEEL+KENVKN ++S G ITL +TKSKPETGEVIGVFES+QPSDTDLGAK PK Sbjct: 259 PAGGRGDEEELSKENVKNTAASVGEITLKITKSKPETGEVIGVFESLQPSDTDLGAKVPK 318 Query: 363 DVKIQGVWYAQLE 401 DVKIQGVWY Q+E Sbjct: 319 DVKIQGVWYGQIE 331
>PSBO_WHEAT (P27665) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 325 Score = 241 bits (615), Expect = 9e-64 Identities = 126/135 (93%), Positives = 127/135 (94%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQLPG ERV FLFTVKQLVATGKPESF PFLVPSYRGSSFLDPKGRGGSTGYDNA AL Sbjct: 194 TVQLPGGERVAFLFTVKQLVATGKPESFR-PFLVPSYRGSSFLDPKGRGGSTGYDNAGAL 252 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 P GGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL +APK Sbjct: 253 PRGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDL--EAPK 310 Query: 363 DVKIQGVWYAQLESN 407 DVKIQGVWYAQLESN Sbjct: 311 DVKIQGVWYAQLESN 325
>PSBO_SPIOL (P12359) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 240 bits (613), Expect = 1e-63 Identities = 118/133 (88%), Positives = 124/133 (93%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQLPG ERVPFLFT+KQLVA+GKPESFSG FLVPSYRGSSFLDPKGRGGSTGYDNAVAL Sbjct: 198 TVQLPGGERVPFLFTIKQLVASGKPESFSGDFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 257 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 PAGGRGDEEEL KEN KN +SS G ITLSVT SKPETGEVIGVF+S+QPSDTDLGAK PK Sbjct: 258 PAGGRGDEEELQKENNKNVASSKGTITLSVTSSKPETGEVIGVFQSLQPSDTDLGAKVPK 317 Query: 363 DVKIQGVWYAQLE 401 DVKI+GVWYAQLE Sbjct: 318 DVKIEGVWYAQLE 330
>PSBO_SOLTU (P26320) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 333 Score = 240 bits (612), Expect = 2e-63 Identities = 117/134 (87%), Positives = 124/134 (92%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQLPG ERVPFLFT+KQLVA+GKPESFS FLVPSYRGSSFLDPKGRGGSTGYDNAVAL Sbjct: 200 TVQLPGGERVPFLFTIKQLVASGKPESFSVDFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 259 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 PAGGRGDEEEL KENVKN +S TG IT +VTKS P+TGEVIGVFES+QPSDTDLGAK PK Sbjct: 260 PAGGRGDEEELQKENVKNTASLTGKITFTVTKSNPQTGEVIGVFESIQPSDTDLGAKTPK 319 Query: 363 DVKIQGVWYAQLES 404 DVKIQG+WYAQLES Sbjct: 320 DVKIQGIWYAQLES 333
>PSBO1_ARATH (P23321) Oxygen-evolving enhancer protein 1-1, chloroplast| precursor (OEE1) (33 kDa subunit of oxygen evolving system of photosystem II) (OEC 33 kDa subunit) (33 kDa thylakoid membrane protein) Length = 332 Score = 239 bits (610), Expect = 3e-63 Identities = 117/133 (87%), Positives = 123/133 (92%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQLPG ERVPFLFTVKQL A+GKP+SF+G FLVPSYRGSSFLDPKGRGGSTGYDNAVAL Sbjct: 200 TVQLPGGERVPFLFTVKQLDASGKPDSFTGKFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 259 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 PAGGRGDEEEL KENVKN ++S G ITL VTKSKPETGEVIGVFES+QPSDTDLGAK PK Sbjct: 260 PAGGRGDEEELVKENVKNTAASVGEITLKVTKSKPETGEVIGVFESLQPSDTDLGAKVPK 319 Query: 363 DVKIQGVWYAQLE 401 DVKIQGVWY QLE Sbjct: 320 DVKIQGVWYGQLE 332
>PSBO_CHLRE (P12853) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 291 Score = 181 bits (460), Expect = 8e-46 Identities = 91/133 (68%), Positives = 101/133 (75%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQLPG ERV FLFT+KQ G + G FLVPSYRGSSFLDPKGRGGSTGYDNAVAL Sbjct: 161 TVQLPGGERVAFLFTIKQFDGKGTLDGIKGDFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 220 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 PA R D EEL KENVK + G+ SV K P TGE+ GVFES+QPSDTDLGAK PK Sbjct: 221 PA--RADAEELLKENVKITKALKGSAVFSVAKVDPVTGEIAGVFESIQPSDTDLGAKPPK 278 Query: 363 DVKIQGVWYAQLE 401 D+K+ G+WYAQL+ Sbjct: 279 DIKVTGLWYAQLK 291
>PSBO_VOLCA (Q9SBN6) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 293 Score = 178 bits (452), Expect = 7e-45 Identities = 89/132 (67%), Positives = 100/132 (75%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQLPG ERV FLFT+KQ G ++ G F+VPSYRGSSFLDPKGRGGSTGYDNAVAL Sbjct: 162 TVQLPGGERVAFLFTIKQFDGKGTLDNIKGDFVVPSYRGSSFLDPKGRGGSTGYDNAVAL 221 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 PA R D EEL KENVK+ + G+ SV K TGE+ GVFES+QPSDTDLGAK PK Sbjct: 222 PA--RADAEELLKENVKSTKALKGSAVFSVAKVNTATGEIAGVFESIQPSDTDLGAKPPK 279 Query: 363 DVKIQGVWYAQL 398 D+KI G+WY QL Sbjct: 280 DIKITGLWYGQL 291
>PSBO_EUGGR (P46483) Oxygen-evolving enhancer protein 1, chloroplast precursor| (OEE1) Length = 338 Score = 177 bits (450), Expect = 1e-44 Identities = 87/132 (65%), Positives = 101/132 (76%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVAL 182 TVQL G ERVPFLFT+K L+A G F G F VPSYRG++FLDPKGRGG++GYD AVAL Sbjct: 205 TVQLAGGERVPFLFTIKNLLAKGDAGQFLGQFDVPSYRGATFLDPKGRGGASGYDTAVAL 264 Query: 183 PAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPK 362 PA GD+EE AKEN K+ ++S G I V K ETGE+ GVFES+QPSDTDLGAK PK Sbjct: 265 PAS--GDDEEYAKENSKSTAASVGTIAFKVAKVNAETGEIAGVFESIQPSDTDLGAKVPK 322 Query: 363 DVKIQGVWYAQL 398 D+K GVWYAQ+ Sbjct: 323 DIKTSGVWYAQI 334
>PSBO_ANASP (P13907) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 273 Score = 157 bits (396), Expect = 2e-38 Identities = 81/141 (57%), Positives = 100/141 (70%), Gaps = 8/141 (5%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGST 158 TVQLPG ERVPFLFT+K LVA +P F G F VPSYRG++FLDPKGRG + Sbjct: 135 TVQLPGGERVPFLFTIKNLVAQTQPGLSSLNTSTDFEGTFKVPSYRGAAFLDPKGRGVVS 194 Query: 159 GYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDT 338 GYDNAVALPA + D+E+L + NVK A G I+L + K +GE+ G FES QPSDT Sbjct: 195 GYDNAVALPA--QADDEDLTRTNVKRAEILNGKISLQIAKVDSSSGEIAGTFESEQPSDT 252 Query: 339 DLGAKAPKDVKIQGVWYAQLE 401 DLGA PK+VKI+G++YA++E Sbjct: 253 DLGADEPKEVKIRGIFYARVE 273
>PSBO_CYAA5 (Q9R6W6) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 275 Score = 147 bits (372), Expect = 1e-35 Identities = 80/140 (57%), Positives = 98/140 (70%), Gaps = 8/140 (5%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGST 158 TVQLPG E+VPF FT+K LV +P F G F VPSYRG++FLDPKGRG +T Sbjct: 136 TVQLPGGEQVPFFFTIKNLVGKTEPGFSSINSSIDFEGDFRVPSYRGATFLDPKGRGLAT 195 Query: 159 GYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDT 338 GYDNAVALPA D+E+ A NVK G+I+L VTK TGE+ GVF+S QPSDT Sbjct: 196 GYDNAVALPA--TADKEDYA--NVKQTPIGKGSISLQVTKVDQATGEIAGVFDSEQPSDT 251 Query: 339 DLGAKAPKDVKIQGVWYAQL 398 DLGAK P +VKI+G++YA++ Sbjct: 252 DLGAKEPVEVKIRGIFYARV 271
>PSBO_SYNEN (P0A432) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 140 bits (354), Expect = 2e-33 Identities = 76/141 (53%), Positives = 96/141 (68%), Gaps = 8/141 (5%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGST 158 TVQ+ G ER+P LFTVK LVA+ +P F G F VPSYR ++FLDPKGRG ++ Sbjct: 133 TVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLAS 192 Query: 159 GYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDT 338 GYD+A+ALP + EEELA+ NVK S + G I+L+V K TGE+ G FES Q SD Sbjct: 193 GYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDD 249 Query: 339 DLGAKAPKDVKIQGVWYAQLE 401 D+GA P +VKIQGV+YA +E Sbjct: 250 DMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNEL (P0A431) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 272 Score = 140 bits (354), Expect = 2e-33 Identities = 76/141 (53%), Positives = 96/141 (68%), Gaps = 8/141 (5%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKPE--------SFSGPFLVPSYRGSSFLDPKGRGGST 158 TVQ+ G ER+P LFTVK LVA+ +P F G F VPSYR ++FLDPKGRG ++ Sbjct: 133 TVQMAGGERIPLLFTVKNLVASTQPNVTSITTSTDFKGEFNVPSYRTANFLDPKGRGLAS 192 Query: 159 GYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDT 338 GYD+A+ALP + EEELA+ NVK S + G I+L+V K TGE+ G FES Q SD Sbjct: 193 GYDSAIALP---QAKEEELARANVKRFSLTKGQISLNVAKVDGRTGEIAGTFESEQLSDD 249 Query: 339 DLGAKAPKDVKIQGVWYAQLE 401 D+GA P +VKIQGV+YA +E Sbjct: 250 DMGAHEPHEVKIQGVFYASIE 270
>PSBO_SYNP7 (P11472) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 277 Score = 135 bits (340), Expect = 7e-32 Identities = 75/141 (53%), Positives = 96/141 (68%), Gaps = 8/141 (5%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVA-TGKPES-------FSGPFLVPSYRGSSFLDPKGRGGST 158 TV LPG E VPFLFTVK LVA T +P + G + VPSYR S+FLDPK RG +T Sbjct: 135 TVLLPGGEEVPFLFTVKGLVASTSEPATSINTSTDLRGGYRVPSYRTSNFLDPKARGLTT 194 Query: 159 GYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDT 338 GY++AVA+P+ G D E+L KENVK + G I+L+V+K TGEV GVF ++QPSDT Sbjct: 195 GYESAVAIPSAG--DAEDLTKENVKRFVTGQGEISLAVSKVDGATGEVAGVFTAIQPSDT 252 Query: 339 DLGAKAPKDVKIQGVWYAQLE 401 D+G K DVK+ G +Y ++E Sbjct: 253 DMGGKEAVDVKLVGQFYGRIE 273
>PSBO_SYNY3 (P10549) Photosystem II manganese-stabilizing polypeptide precursor| (MSP) Length = 274 Score = 132 bits (333), Expect = 4e-31 Identities = 70/143 (48%), Positives = 89/143 (62%), Gaps = 8/143 (5%) Frame = +3 Query: 3 TVQLPGXERVPFLFTVKQLVATGKP--------ESFSGPFLVPSYRGSSFLDPKGRGGST 158 TV LPG E VPF FTVK T +P F G F VPSYRG+ FLDPK RG T Sbjct: 136 TVLLPGGEEVPFFFTVKNFTGTTEPGFTSINSSTDFVGDFNVPSYRGAGFLDPKARGLYT 195 Query: 159 GYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDT 338 GYDNAVALP+ + + N K G ++L VT+ TGE+ G+FES QPSDT Sbjct: 196 GYDNAVALPSAA-----DKFRTNKKETPLGKGTLSLQVTQVDGSTGEIAGIFESEQPSDT 250 Query: 339 DLGAKAPKDVKIQGVWYAQLESN 407 DLGAK P DVK++G++Y +++++ Sbjct: 251 DLGAKEPLDVKVRGIFYGRVDTD 273
>PSBO_PINPS (P81665) Oxygen-evolving enhancer protein 1 (OEE1) (33 kDa subunit| of oxygen evolving system of photosystem II) (33 kDa thylakoid membrane protein) (Fragments) Length = 26 Score = 40.4 bits (93), Expect = 0.003 Identities = 17/20 (85%), Positives = 19/20 (95%) Frame = +3 Query: 138 KGRGGSTGYDNAVALPAGGR 197 + +GGSTGYDNAVALPAGGR Sbjct: 7 QSKGGSTGYDNAVALPAGGR 26
>CH10_ENTFA (Q93EU7) 10 kDa chaperonin (Protein Cpn10) (groES protein)| Length = 94 Score = 34.3 bits (77), Expect = 0.21 Identities = 23/54 (42%), Positives = 28/54 (51%) Frame = +3 Query: 213 LAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQPSDTDLGAKAPKDVKI 374 +AKE K G + SV K KP+TGEVI V E + G K P +VKI Sbjct: 13 VAKEEEKTVG---GIVLASVAKEKPQTGEVIAVGEG---RVLENGTKVPMEVKI 60
>MRT4_SCHPO (Q9USZ6) mRNA turnover protein 4 homolog| Length = 241 Score = 31.2 bits (69), Expect = 1.8 Identities = 27/63 (42%), Positives = 30/63 (47%), Gaps = 1/63 (1%) Frame = +3 Query: 174 VALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFES-VQPSDTDLGA 350 V A G EEE A+ K G + L T SKP+ EVIG FES VQ GA Sbjct: 72 VMAKALGHTPEEEHAENVSKLTKLLHGAVGLLFTNSKPD--EVIGYFESFVQNDFARAGA 129 Query: 351 KAP 359 AP Sbjct: 130 VAP 132
>DP13B_MOUSE (Q8K3G9) DCC-interacting protein 13 beta (Dip13 beta) (Adapter| protein containing PH domain, PTB domain and leucine zipper motif 2) Length = 662 Score = 30.8 bits (68), Expect = 2.3 Identities = 15/45 (33%), Positives = 22/45 (48%) Frame = +3 Query: 192 GRGDEEELAKENVKNASSSTGNITLSVTKSKPETGEVIGVFESVQ 326 G+ E + +N+KN+ NI T S PET E+I +Q Sbjct: 405 GKKQESSCSSQNIKNSDIEDDNIVPKATASIPETEELIAPGTPIQ 449
>RIC8B_HUMAN (Q9NVN3) Synembryn-B (Brain synembrin) (hSyn) (Protein Ric-8B)| Length = 536 Score = 30.4 bits (67), Expect = 3.0 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = +3 Query: 96 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 260 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 261 TLSVTKSKP 287 T + + P Sbjct: 489 TGHLEEPMP 497
>RIC8B_MOUSE (Q80XE1) Synembryn-B (Protein Ric-8B)| Length = 560 Score = 30.4 bits (67), Expect = 3.0 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 5/69 (7%) Frame = +3 Query: 96 FLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGD-----EEELAKENVKNASSSTGNI 260 F++ R S L G G + G A L AGGRGD +E+ E KNA + I Sbjct: 429 FVLCKERVDSLLKYTGYGNAAGLLAARGLLAGGRGDNWYSEDEDTDTEEYKNAKPNINLI 488 Query: 261 TLSVTKSKP 287 T + + P Sbjct: 489 TGHLEEPMP 497
>METB_HERAU (P24601) Probable cystathionine gamma-synthase (EC 2.5.1.48) (CGS)| (O-succinylhomoserine (thiol)-lyase) (Fragment) Length = 319 Score = 30.0 bits (66), Expect = 4.0 Identities = 15/42 (35%), Positives = 24/42 (57%) Frame = +3 Query: 42 FTVKQLVATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYD 167 F + + A PES +G +VP Y+ S++ +G G TGY+ Sbjct: 5 FATRAIHAGQDPESVTGAVIVPIYQTSTYAQ-RGVGDHTGYE 45
>MECR_RAT (Q9Z311) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) (Nuclear receptor-binding factor 1) (NRBF-1) Length = 373 Score = 30.0 bits (66), Expect = 4.0 Identities = 18/46 (39%), Positives = 24/46 (52%), Gaps = 2/46 (4%) Frame = +3 Query: 324 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVK--ILIFCACIR 455 QP + KD+K++G W +Q + N S E K ILI C IR Sbjct: 291 QPVTASVSMLIFKDLKLRGFWLSQWKKNHSPDEFKELILILCNLIR 336
>LEPA_PHOLL (Q7N1X3) GTP-binding protein lepA| Length = 598 Score = 29.6 bits (65), Expect = 5.2 Identities = 19/78 (24%), Positives = 34/78 (43%), Gaps = 3/78 (3%) Frame = -1 Query: 448 HAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSDGCTLSKTPITSPVSGLLLVT 269 +A ++ IFT + D W++ ++ + V D TL++ P P+ G V Sbjct: 233 NADRLGIFTPKRVDRDVLGCGEVGWLVCAIKDILGAPVGDTLTLARQPAEKPLPGFKKVK 292 Query: 268 LRV---MLPVEEDAFFTF 224 +V + PV D + F Sbjct: 293 PQVYAGLFPVSSDDYEAF 310
>PRDM8_MOUSE (Q8BZ97) PR domain zinc finger protein 8 (PR domain-containing| protein 8) Length = 687 Score = 29.3 bits (64), Expect = 6.8 Identities = 31/96 (32%), Positives = 40/96 (41%), Gaps = 7/96 (7%) Frame = +3 Query: 114 RGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNASSSTGNITLSVTKSKPET 293 RGS+F GG G A AGG G + A + K+A S S ++ P Sbjct: 460 RGSAFTSVSQLGGGGGAGTAGT--AGGSGGGQTAASDERKSAFSQPAR---SFSQLSPLV 514 Query: 294 -GEVIGVFESVQPSD----TDL--GAKAPKDVKIQG 380 G+ +G E P D T L A P VK+QG Sbjct: 515 LGQKLGALEPCHPGDGVGPTRLYPAAADPLAVKLQG 550
>MECR_MOUSE (Q9DCS3) Trans-2-enoyl-CoA reductase, mitochondrial precursor (EC| 1.3.1.38) Length = 373 Score = 29.3 bits (64), Expect = 6.8 Identities = 15/42 (35%), Positives = 21/42 (50%) Frame = +3 Query: 324 QPSDTDLGAKAPKDVKIQGVWYAQLESN*SIAEVKILIFCAC 449 QP + KD+K++G W +Q + N S E K LI C Sbjct: 291 QPVTASVSLLIFKDLKLRGFWLSQWKKNHSPDEFKELILTLC 332
>RM02_YEAST (P12687) 60S ribosomal protein L2, mitochondrial precursor (YmL2)| (YMR6) Length = 371 Score = 29.3 bits (64), Expect = 6.8 Identities = 16/44 (36%), Positives = 22/44 (50%) Frame = -1 Query: 145 RPFGSRKEEPL*LGTRKGPLKLSGLPVATSCLTVKRNGTRSXPG 14 R GSR G R GP K G V+T + +++ GT+ PG Sbjct: 31 RAAGSRTSMKDSAGRRLGPKKYEGQDVSTGEIIMRQRGTKFYPG 74
>BTD_DROME (Q24266) Transcription factor btd (Protein buttonhead)| Length = 644 Score = 29.3 bits (64), Expect = 6.8 Identities = 19/77 (24%), Positives = 36/77 (46%) Frame = -1 Query: 508 YTHKHIVASILSSPPTNPRMHAQKMSIFTSAML*LDSSCAYHTPWILTSLGALAPRSVSD 329 Y H S ++ PP P + Q+M+ TS+ ++ PW +S A+ P + S Sbjct: 474 YQHSTSAGSSVNPPPPPPPLFQQQMTTTTSSA----AASFVEQPWSSSSSRAIQPATTS- 528 Query: 328 GCTLSKTPITSPVSGLL 278 + S + +SP + ++ Sbjct: 529 ASSSSSSSASSPAAAVV 545
>H1_EUPES (Q9M5W4) Histone H1| Length = 229 Score = 29.3 bits (64), Expect = 6.8 Identities = 16/38 (42%), Positives = 21/38 (55%) Frame = +3 Query: 9 QLPGXERVPFLFTVKQLVATGKPESFSGPFLVPSYRGS 122 QLP R LF +K+LVA+GK F +PS R + Sbjct: 86 QLPSNFRKLLLFHLKKLVASGKLVKVKNSFKLPSARAA 123
>OSA_DROME (Q8IN94) Trithorax group protein osa (Protein eyelid)| Length = 2716 Score = 28.9 bits (63), Expect = 8.9 Identities = 19/64 (29%), Positives = 28/64 (43%) Frame = +3 Query: 63 ATGKPESFSGPFLVPSYRGSSFLDPKGRGGSTGYDNAVALPAGGRGDEEELAKENVKNAS 242 A+G PES GP + G S P G G + V G +E + + NAS Sbjct: 845 ASGGPES-GGPEHISQDNGISSSGPTGAAGMHAVTSVVTTGPDGTSMDEVSQQSTLSNAS 903 Query: 243 SSTG 254 +++G Sbjct: 904 AASG 907
>ILVC_HELPJ (Q9ZMA9) Ketol-acid reductoisomerase (EC 1.1.1.86)| (Acetohydroxy-acid isomeroreductase) (Alpha-keto-beta-hydroxylacil reductoisomerase) Length = 330 Score = 28.9 bits (63), Expect = 8.9 Identities = 15/25 (60%), Positives = 19/25 (76%) Frame = +3 Query: 261 TLSVTKSKPETGEVIGVFESVQPSD 335 +LSV+K+K E EV+GV E VQ SD Sbjct: 52 SLSVSKAKKEGFEVLGVKELVQQSD 76
>EBI_DROME (Q95RJ9) F-box-like/WD repeat protein ebi| Length = 700 Score = 28.9 bits (63), Expect = 8.9 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 7/54 (12%) Frame = +3 Query: 117 GSSFLDPKGRGG---STGYDNAVALPAGG----RGDEEELAKENVKNASSSTGN 257 G ++ G GG STG N+ + PAGG G ++ ++ + + SSS+GN Sbjct: 170 GGTYAGNNGAGGNQASTGGSNSTSTPAGGDLAAPGASQKKSQNSNEAGSSSSGN 223 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 59,754,599 Number of Sequences: 219361 Number of extensions: 1074069 Number of successful extensions: 4407 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 4264 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4388 length of database: 80,573,946 effective HSP length: 104 effective length of database: 57,760,402 effective search space used: 3927707336 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
