ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal31e22 |
|---|---|
| Clone Library Name | barley_pub |
>YDQ4_SCHPO (O14197) Hypothetical protein C5D6.04 in chromosome I| Length = 452 Score = 50.8 bits (120), Expect = 2e-06 Identities = 30/126 (23%), Positives = 61/126 (48%) Frame = +1 Query: 58 SVLSMLKYAVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLG 237 +V S+L+ + +V + G+++A K L + +K+++ L PCL+F ++G Sbjct: 11 NVWSLLRPIIESDLEVIVIALGGYVLAKK--GFLPRDAQKVISSLNVYFFTPCLVFEKVG 68 Query: 238 SAITLEKLVQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVXXXXXXXXXXXPL 417 + + L+ L+ +PV V+ + + LI F++A + R F PL Sbjct: 69 NGLNLKMLIDLSLLPVFYVIISAASILISFLLAKLFRLTPRQRNFATACITFQNSNSLPL 128 Query: 418 VLIAAL 435 L+++L Sbjct: 129 ALVSSL 134
>ECM3_YEAST (Q99252) Extracellular matrix protein 3| Length = 613 Score = 39.7 bits (91), Expect = 0.004 Identities = 24/91 (26%), Positives = 48/91 (52%) Frame = +1 Query: 82 AVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAITLEKL 261 +V PI K++ + +GF + +NIL + ++ +V ++LLPCL F+++ + I + Sbjct: 13 SVRPIIKIYLIIGVGFGLCK--MNILTVQATRSISDIVLTILLPCLSFNKIVANIEDNDI 70 Query: 262 VQWWYIPVNIVVGAVSGSLIGFVVASIIRPP 354 I + V+ +G F+V S++ P Sbjct: 71 KDVGIICLTSVILFATGLGFAFIVRSVLPVP 101
>YNJ5_YEAST (P53932) Hypothetical 71.2 kDa protein in RPS7B-YPT53 intergenic| region Length = 642 Score = 37.7 bits (86), Expect = 0.015 Identities = 24/95 (25%), Positives = 51/95 (53%) Frame = +1 Query: 82 AVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAITLEKL 261 +V PI K++ + +GFLMA + IL ++++ +V ++LLP L F+++ + I + + Sbjct: 13 SVKPIIKIYLIIGVGFLMAK--MGILTVEATRIISDIVLTVLLPSLSFNKIVANIEDKDI 70 Query: 262 VQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYF 366 I ++ ++ SG +VV + P ++ Sbjct: 71 KSVGIICLSALLIFGSGFFFAYVVRLFLPVPKQWY 105
>YL152_YEAST (P54072) Protein YLR152C| Length = 576 Score = 37.4 bits (85), Expect = 0.020 Identities = 18/56 (32%), Positives = 36/56 (64%) Frame = +1 Query: 82 AVLPIAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAIT 249 A+ PI K++T+ +G+L+A +I+ K ++ +V + +LPCL F+++ S I+ Sbjct: 12 ALKPIFKIYTIMLVGYLVAK--FDIVSMENAKGISNMVVNAILPCLTFNKIVSNIS 65
>YB8B_YEAST (P38355) Protein YBR287W| Length = 427 Score = 37.4 bits (85), Expect = 0.020 Identities = 29/129 (22%), Positives = 56/129 (43%), Gaps = 1/129 (0%) Frame = +1 Query: 52 DTSVLSMLKYAVLP-IAKVFTVCFMGFLMATKYVNILQPNGRKLLNGLVFSLLLPCLIFS 228 +T + L Y V + +V + GF A+ +L +K+++ L L PCLIFS Sbjct: 3 ETFSFAHLAYLVFESVLQVVIIALAGFWSASS--GLLPKQSQKIISLLNVDLFTPCLIFS 60 Query: 229 QLGSAITLEKLVQWWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFTVXXXXXXXXXX 408 +L ++++ K+ + IP+ + + G +++ I+ F V Sbjct: 61 KLAKSLSMAKIFEIAIIPIFFGLTTGISFISGKIMSRILDLDKDETNFVVANSVFGNSNS 120 Query: 409 XPLVLIAAL 435 P+ L +L Sbjct: 121 LPVSLTLSL 129
>UDA1_RAT (P36510) UDP-glucuronosyltransferase 2A1 precursor (EC 2.4.1.17)| (UDPGT) (UGT-OLF) Length = 527 Score = 33.1 bits (74), Expect = 0.37 Identities = 22/90 (24%), Positives = 40/90 (44%), Gaps = 4/90 (4%) Frame = -3 Query: 468 RVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHG 301 ++P+++ W RY +P + N++L WI ++D H K G +G Sbjct: 328 QIPQKVLW----------RYKGKIPATLGSNTRLFDWIPQNDLLGHPKTRAFITHGGTNG 377 Query: 300 TYNNIYWNIPPLHQLLESDRAAQLGKYKAR 211 Y IY IP + + +D+ + KA+ Sbjct: 378 IYEAIYHGIPMVGVPMFADQPDNIAHMKAK 407
>UDC1_RABIT (P36514) UDP-glucuronosyltransferase 2C1 (EC 2.4.1.17) (UDPGT)| (Fragment) Length = 502 Score = 32.7 bits (73), Expect = 0.49 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Frame = -3 Query: 468 RVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHG 301 ++P+++ W RY P + N++L WI ++D H K G +G Sbjct: 303 QIPQKVLW----------RYTGKKPATLGPNTRLFEWIPQNDLLGHPKTRAFITHGGTNG 352 Query: 300 TYNNIYWNIPPLHQLLESDRAAQLGKYKAR 211 Y IY +P + L D+ + + KA+ Sbjct: 353 LYEAIYHGVPMVGIPLFGDQPDNIARVKAK 382
>UDB7_HUMAN (P16662) UDP-glucuronosyltransferase 2B7 precursor (EC 2.4.1.17)| (UDPGT) (3,4-catechol estrogen specific) (UDPGTh-2) Length = 529 Score = 32.3 bits (72), Expect = 0.64 Identities = 24/90 (26%), Positives = 40/90 (44%), Gaps = 4/90 (4%) Frame = -3 Query: 468 RVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHG 301 ++P+++ W R+ N P + N++L WI ++D H K G +G Sbjct: 330 QIPQKVLW----------RFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANG 379 Query: 300 TYNNIYWNIPPLHQLLESDRAAQLGKYKAR 211 Y IY IP + L +D+ + KAR Sbjct: 380 IYEAIYHGIPMVGIPLFADQPDNIAHMKAR 409
>UDB4_HUMAN (P06133) UDP-glucuronosyltransferase 2B4 precursor (EC 2.4.1.17)| (UDPGT) (Hyodeoxycholic acid) (HLUG25) (UDPGTh-1) Length = 528 Score = 32.0 bits (71), Expect = 0.83 Identities = 23/90 (25%), Positives = 40/90 (44%), Gaps = 4/90 (4%) Frame = -3 Query: 468 RVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHG 301 ++P+++ W R+ N P + N++L WI ++D H K G +G Sbjct: 330 KIPQKVLW----------RFDGNKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGANG 379 Query: 300 TYNNIYWNIPPLHQLLESDRAAQLGKYKAR 211 Y IY IP + L +D+ + KA+ Sbjct: 380 IYEAIYHGIPMVGVPLFADQPDNIAHMKAK 409
>UDA1_HUMAN (Q9Y4X1) UDP-glucuronosyltransferase 2A1 precursor (EC 2.4.1.17)| Length = 527 Score = 30.8 bits (68), Expect = 1.9 Identities = 21/90 (23%), Positives = 40/90 (44%), Gaps = 4/90 (4%) Frame = -3 Query: 468 RVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHG 301 ++P+++ W RY P + +N++L WI ++D H K G +G Sbjct: 328 QIPQKVLW----------RYKGKKPATLGNNTQLFDWIPQNDLLGHPKTKAFITHGGTNG 377 Query: 300 TYNNIYWNIPPLHQLLESDRAAQLGKYKAR 211 Y IY +P + + +D+ + KA+ Sbjct: 378 IYEAIYHGVPMVGVPMFADQPDNIAHMKAK 407
>UDB33_MACMU (Q9GLD9) UDP-glucuronosyltransferase 2B33 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 30.8 bits (68), Expect = 1.9 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Frame = -3 Query: 468 RVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHG 301 ++P+++ W R+ N P + N++L WI ++D H K G +G Sbjct: 330 QIPQKVLW----------RFDGNKPDTLGVNTRLYKWIPQNDLLGHPKTKAFITHGGANG 379 Query: 300 TYNNIYWNIPPLHQLLESDRAAQLGKYKAR 211 Y IY +P + L +D+ + K R Sbjct: 380 IYEAIYHGVPMVGIPLFADQPDNIAHMKTR 409
>UDB23_MACFA (Q9TSL6) UDP-glucuronosyltransferase 2B23 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 30.8 bits (68), Expect = 1.9 Identities = 22/90 (24%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Frame = -3 Query: 468 RVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHG 301 ++P+++ W R+ N P + N++L WI ++D H K G +G Sbjct: 330 QIPQKVLW----------RFDGNKPDTLGVNTRLYKWIPQNDLLGHPKTKAFITHGGANG 379 Query: 300 TYNNIYWNIPPLHQLLESDRAAQLGKYKAR 211 Y IY +P + L +D+ + K R Sbjct: 380 IYEAIYHGVPMVGIPLFADQPDNIAHMKTR 409
>Y576_METJA (Q57996) Hypothetical protein MJ0576| Length = 347 Score = 30.4 bits (67), Expect = 2.4 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = +1 Query: 193 VFSLLLPCLIFSQLGSAITLEKLVQWWYIP-VNIVVGAVSGSLI 321 +FSL++P +F +I L+ + WYIP V ++V ++GSLI Sbjct: 126 LFSLIVPFYMFKS--ESIKLDHVNPGWYIPPVGLIVIPIAGSLI 167
>UDB10_HUMAN (P36537) UDP-glucuronosyltransferase 2B10 precursor (EC 2.4.1.17)| (UDPGT) Length = 528 Score = 30.4 bits (67), Expect = 2.4 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Frame = -3 Query: 468 RVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHG 301 ++P+++ W R+ N P + N++L WI ++D H K G +G Sbjct: 329 KIPQKVLW----------RFDGNKPDALGLNTRLYKWIPQNDLLGHPKTRAFITHGGANG 378 Query: 300 TYNNIYWNIPPLHQLLESDRAAQLGKYKAR 211 Y IY IP + L D+ + KA+ Sbjct: 379 IYEAIYHGIPMVGIPLFFDQPDNIAHMKAK 408
>Y762_METJA (Q58172) Hypothetical protein MJ0762| Length = 342 Score = 30.4 bits (67), Expect = 2.4 Identities = 17/44 (38%), Positives = 28/44 (63%), Gaps = 1/44 (2%) Frame = +1 Query: 193 VFSLLLPCLIFSQLGSAITLEKLVQWWYIP-VNIVVGAVSGSLI 321 +FSL++P +F +I L+ + WYIP V ++V ++GSLI Sbjct: 119 LFSLIVPFYMFKS--ESIKLDHVNPGWYIPPVGLIVIPIAGSLI 160
>Y1031_METJA (Q58437) Hypothetical protein MJ1031| Length = 308 Score = 30.4 bits (67), Expect = 2.4 Identities = 14/69 (20%), Positives = 36/69 (52%) Frame = +1 Query: 139 TKYVNILQPNGRKLLNGLVFSLLLPCLIFSQLGSAITLEKLVQWWYIPVNIVVGAVSGSL 318 +K IL+ K+LN +V + +P IF + ++ +++++ +PV I + + + Sbjct: 20 SKIFGILKEEHAKILNNIVIYIAMPSTIFLTISKNVSSSQILEFLKLPVVIFLCCLFVGI 79 Query: 319 IGFVVASII 345 + +++ I Sbjct: 80 LAYLLGKHI 88
>UDB11_HUMAN (O75310) UDP-glucuronosyltransferase 2B11 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 30.4 bits (67), Expect = 2.4 Identities = 23/90 (25%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Frame = -3 Query: 468 RVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHG 301 ++P+++ W R+ N P + N++L WI ++D H K G +G Sbjct: 330 KIPQKVLW----------RFDGNKPDALGLNTRLYKWIPQNDLLGHPKTRAFITHGGANG 379 Query: 300 TYNNIYWNIPPLHQLLESDRAAQLGKYKAR 211 Y IY IP + L D+ + KA+ Sbjct: 380 IYEAIYHGIPMVGIPLFFDQPDNIAHMKAK 409
>AVP_PHAAU (P21616) Pyrophosphate-energized vacuolar membrane proton pump (EC| 3.6.1.1) (Pyrophosphate-energized inorganic pyrophosphatase) (H(+)-PPase) (Vacuolar H(+)-pyrophosphatase) Length = 764 Score = 29.6 bits (65), Expect = 4.1 Identities = 27/116 (23%), Positives = 57/116 (49%), Gaps = 12/116 (10%) Frame = +1 Query: 19 ALVTAAQGGSTDTSVLSMLKYAVLPIAKVFTVCFMGFLMATKYVNI-----LQPNGRK-- 177 ALV A+ L+ + Y ++ + VC + L AT + I ++P +K Sbjct: 305 ALVVASISSFGLNHELTAMLYPLIVSSVGILVCLLTTLFATDFFEIKAVKEIEPALKKQL 364 Query: 178 LLNGLVFSLLLPCLIFSQLGSAITL-----EKLVQWWYIPVNIVVGAVSGSLIGFV 330 +++ ++ ++ + + F L ++ T+ +K V+ W + + + VG +G +IGFV Sbjct: 365 VISTVLMTIGVAVVSFVALPTSFTIFNFGVQKDVKSWQLFLCVAVGLWAGLIIGFV 420
>VME1_IBVBC (P69602) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 225 Score = 29.3 bits (64), Expect = 5.4 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Frame = +1 Query: 175 KLLNGLVFSLLLPCLIFSQLGSAI------TLEKLVQWWYIPVNIVVGAVSGSL---IGF 327 K N + + LL I Q G A TL+ +V W + P+NI VG +S + G Sbjct: 19 KEYNLFITAFLLFLTIILQYGYATRSKVIYTLKMIVLWCFWPLNIAVGVISCTYPPNTGG 78 Query: 328 VVASIIRPPYPYFKF 372 +VA+II + F Sbjct: 79 LVAAIILTVFACLSF 93
>VME1_IBVB (P69601) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 225 Score = 29.3 bits (64), Expect = 5.4 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 9/75 (12%) Frame = +1 Query: 175 KLLNGLVFSLLLPCLIFSQLGSAI------TLEKLVQWWYIPVNIVVGAVSGSL---IGF 327 K N + + LL I Q G A TL+ +V W + P+NI VG +S + G Sbjct: 19 KEYNLFITAFLLFLTIILQYGYATRSKVIYTLKMIVLWCFWPLNIAVGVISCTYPPNTGG 78 Query: 328 VVASIIRPPYPYFKF 372 +VA+II + F Sbjct: 79 LVAAIILTVFACLSF 93
>IPYR_PLAF7 (O77392) Probable inorganic pyrophosphatase (EC 3.6.1.1)| (Pyrophosphate phospho-hydrolase) (PPase) Length = 380 Score = 29.3 bits (64), Expect = 5.4 Identities = 19/73 (26%), Positives = 30/73 (41%) Frame = -3 Query: 426 NENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKANQGSRHGTYNNIYWNIPPLHQLLES 247 N++ Y V + + KLE+ +R + +G +N+IYWN L Q E Sbjct: 118 NDDGTYNMIVEITKYNYIKLEIQLREKFNVIKQDKKKGKLRYYHNSIYWNYGALPQTYEY 177 Query: 246 DRAAQLGKYKARK 208 + K K K Sbjct: 178 PKHIYQNKSKKNK 190
>NIR_LEPMC (P43504) Nitrite reductase [NAD(P)H] (EC 1.7.1.4) (Fragment)| Length = 185 Score = 28.9 bits (63), Expect = 7.1 Identities = 21/64 (32%), Positives = 31/64 (48%) Frame = -3 Query: 336 RHHKANQGSRHGTYNNIYWNIPPLHQLLESDRAAQLGKYKARK*KREHKPVEKLAAVGLE 157 RH +A GS+ G +N WN P ++L E + A+L K + P ++ VGL Sbjct: 26 RHVQATWGSKDGNISNTEWNDPEANRLPE--KVAELEK---KGELNNSHPRRRVVVVGLG 80 Query: 156 DVDV 145 V V Sbjct: 81 MVGV 84
>Y736_HAEIN (P44849) Hypothetical sodium-dependent transporter HI0736| Length = 508 Score = 28.9 bits (63), Expect = 7.1 Identities = 11/36 (30%), Positives = 19/36 (52%) Frame = +1 Query: 268 WWYIPVNIVVGAVSGSLIGFVVASIIRPPYPYFKFT 375 WW + VN+++G ++G+ + Y YF FT Sbjct: 95 WWQMMVNVIIGLYYAVVLGWAAS------YTYFSFT 124
>VME1_IBVB2 (P11222) E1 glycoprotein (Matrix glycoprotein) (Membrane| glycoprotein) Length = 225 Score = 28.5 bits (62), Expect = 9.2 Identities = 20/69 (28%), Positives = 32/69 (46%), Gaps = 13/69 (18%) Frame = +1 Query: 175 KLLNGLVFSLLLPCLIFSQLGSAI------TLEKLVQWWYIPVNIVVGAVS-------GS 315 K N + + LL I Q G A TL+ +V W + P+NI VG +S G Sbjct: 19 KEYNLFITAFLLFLTIILQYGYATRSKVIYTLKMIVLWCFWPLNIAVGVISCIYPPNTGG 78 Query: 316 LIGFVVASI 342 L+ ++ ++ Sbjct: 79 LVAAIILTV 87
>NYX_HUMAN (Q9GZU5) Nyctalopin precursor| Length = 481 Score = 28.5 bits (62), Expect = 9.2 Identities = 9/26 (34%), Positives = 18/26 (69%), Gaps = 1/26 (3%) Frame = +3 Query: 258 VGAVVVYSSKYCCRCRV-WILDWLCG 332 +G + ++ + +CC CR+ W+ DW+ G Sbjct: 328 LGRLFLFRNPWCCDCRLEWLRDWMEG 353
>UDB18_MACFA (O97951) UDP-glucuronosyltransferase 2B18 precursor (EC 2.4.1.17)| (UDPGT) Length = 529 Score = 28.5 bits (62), Expect = 9.2 Identities = 21/90 (23%), Positives = 39/90 (43%), Gaps = 4/90 (4%) Frame = -3 Query: 468 RVPKRIGWVPT*CCNENQRYISNVPYSNVDNSKLEVWIRRSDDRRHHKA----NQGSRHG 301 ++P+++ W R+ P + N++L WI ++D H K G +G Sbjct: 330 QIPQKVLW----------RFDGKKPDTLGLNTRLYKWIPQNDLLGHPKTRAFITHGGSNG 379 Query: 300 TYNNIYWNIPPLHQLLESDRAAQLGKYKAR 211 Y IY +P + L +D+ + KA+ Sbjct: 380 IYEAIYHGVPMVGIPLFADQPDNIAHMKAK 409 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 62,038,033 Number of Sequences: 219361 Number of extensions: 1243376 Number of successful extensions: 4036 Number of sequences better than 10.0: 26 Number of HSP's better than 10.0 without gapping: 3926 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4033 length of database: 80,573,946 effective HSP length: 103 effective length of database: 57,979,763 effective search space used: 3130907202 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
