ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal31e04
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1MT1_WHEAT (P43400) Metallothionein-like protein 1 (MT-1) 86 4e-17
2MT1_FESRU (O24528) Metallothionein-like protein 1 (MT-1) 54 2e-07
3MT1_ORYSA (Q40633) Metallothionein-like protein 1 47 4e-05
4MT1_MAIZE (P30571) Metallothionein-like protein 1 (MT-1) 36 0.049
5MT1_HORVU (P26571) Metallothionein-like protein 1 (MT-1) 36 0.064

>MT1_WHEAT (P43400) Metallothionein-like protein 1 (MT-1)|
          Length = 75

 Score = 86.3 bits (212), Expect = 4e-17
 Identities = 42/44 (95%), Positives = 43/44 (97%)
 Frame = +1

Query: 58  MYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGCS 189
           MYPDLTEQGSA AQVAAVVVLG+APENKAGQFEVAAGQSGEGCS
Sbjct: 20  MYPDLTEQGSAAAQVAAVVVLGVAPENKAGQFEVAAGQSGEGCS 63



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>MT1_FESRU (O24528) Metallothionein-like protein 1 (MT-1)|
          Length = 70

 Score = 53.9 bits (128), Expect = 2e-07
 Identities = 30/43 (69%), Positives = 33/43 (76%)
 Frame = +1

Query: 58  MYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAAGQSGEGC 186
           MYPDL EQ S T Q  AVVV+G+A ENKAGQFE+A   SGEGC
Sbjct: 20  MYPDLDEQASTTTQ--AVVVVGVAHENKAGQFEMA---SGEGC 57



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>MT1_ORYSA (Q40633) Metallothionein-like protein 1|
          Length = 74

 Score = 46.6 bits (109), Expect = 4e-05
 Identities = 26/45 (57%), Positives = 31/45 (68%), Gaps = 2/45 (4%)
 Frame = +1

Query: 61  YPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA--GQSGEGCS 189
           YPDL E+ S+T    A VVLG+APE KA QFE AA  G++  GCS
Sbjct: 21  YPDLEEKSSSTK---ATVVLGVAPEKKAQQFEAAAESGETAHGCS 62



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>MT1_MAIZE (P30571) Metallothionein-like protein 1 (MT-1)|
          Length = 76

 Score = 36.2 bits (82), Expect = 0.049
 Identities = 24/47 (51%), Positives = 28/47 (59%), Gaps = 4/47 (8%)
 Frame = +1

Query: 61  YPDLTEQGSATAQVAAVVVLGMAPENKAG-QFEVAAGQSGE---GCS 189
           YPDL E  +A       VVLG+APE KA  +F  AA +SGE   GCS
Sbjct: 21  YPDLEETSTAAQPT---VVLGVAPEKKAAPEFVEAAAESGEAAHGCS 64



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>MT1_HORVU (P26571) Metallothionein-like protein 1 (MT-1)|
          Length = 74

 Score = 35.8 bits (81), Expect = 0.064
 Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 2/46 (4%)
 Frame = +1

Query: 58  MYPDLTEQGSATAQVAAVVVLGMAPENKAGQFEVAA--GQSGEGCS 189
           MYPDL E+  AT QV  V+VLG+       QFE AA  G++  GCS
Sbjct: 20  MYPDLEEKSGATMQVT-VIVLGVGSAKV--QFEEAAEFGEAAHGCS 62


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 41,374,936
Number of Sequences: 219361
Number of extensions: 589028
Number of successful extensions: 1591
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1546
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1584
length of database: 80,573,946
effective HSP length: 103
effective length of database: 57,979,763
effective search space used: 3478785780
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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