ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
Japanese | English
更新日:2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal30o17
Clone Library Name barley_pub

No. Definition Score
(bits)
E
Value
1VA727_ARATH (Q9M376) Vesicle-associated membrane protein 727 (At... 257 2e-68
2VA725_ARATH (O48850) Vesicle-associated membrane protein 725 (At... 203 4e-52
3VA726_ARATH (Q9MAS5) Putative vesicle-associated membrane protei... 201 1e-51
4VA722_ARATH (P47192) Vesicle-associated membrane protein 722 (At... 200 2e-51
5VA721_ARATH (Q9ZTW3) Vesicle-associated membrane protein 721 (At... 199 7e-51
6VA723_ARATH (Q8VY69) Vesicle-associated membrane protein 723 (At... 176 4e-44
7VA724_ARATH (O23429) Vesicle-associated membrane protein 724 (At... 173 4e-43
8VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (At... 110 4e-24
9VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (At... 105 1e-22
10VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (At... 100 5e-21
11VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (At... 94 4e-19
12SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insen... 80 6e-15
13SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1 78 2e-14
14SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22 53 8e-07
15SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 v... 50 5e-06
16SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 v... 50 5e-06
17SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 v... 50 5e-06
18SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22 41 0.003
19SEC22_KLULA (Q6CJA0) Protein transport protein SEC22 37 0.062
20VAMPL_ARATH (Q84WF5) Probable VAMP-like protein At1g33485 35 0.18
21SNC2_YEAST (P33328) Synaptobrevin homolog 2 33 0.53
22SNC1_YEAST (P31109) Synaptobrevin homolog 1 30 4.5
23VAMP4_MOUSE (O70480) Vesicle-associated membrane protein 4 (VAMP-4) 30 5.8
24VAMP4_HUMAN (O75379) Vesicle-associated membrane protein 4 (VAMP-4) 30 5.8
25VAMP8_MOUSE (O70404) Vesicle-associated membrane protein 8 (VAMP... 30 7.6
26PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helica... 30 7.6
27KLF2_MOUSE (Q60843) Krueppel-like factor 2 (Lung krueppel-like f... 30 7.6
28SYB_APLCA (P35589) Synaptobrevin 29 10.0
29SYB_DROME (P18489) Synaptobrevin 29 10.0
30POPD2_HUMAN (Q9HBU9) Popeye domain-containing protein 2 (Popeye ... 29 10.0

>VA727_ARATH (Q9M376) Vesicle-associated membrane protein 727 (AtVAMP727)|
          Length = 240

 Score =  257 bits (657), Expect = 2e-68
 Identities = 125/176 (71%), Positives = 150/176 (85%)
 Frame = +2

Query: 98  SKQTLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPSNSTRSTYSCDGHTFNFLVDR 277
           S++ LIYSFVAKG+VVLAEHT +SGNFSTIAVQCLQKLP+NS++ TYSCDGHTFNFLVD 
Sbjct: 2   SQKGLIYSFVAKGTVVLAEHTPYSGNFSTIAVQCLQKLPTNSSKYTYSCDGHTFNFLVDN 61

Query: 278 GFVFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFS 457
           GFVFLVVA+E+ GRSVPFVFLERV+EDF +RY +SI  + +HP              RFS
Sbjct: 62  GFVFLVVADESTGRSVPFVFLERVKEDFKKRYEASIKNDERHP-LADEDEDDDLFGDRFS 120

Query: 458 IAYNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           +AYNLDREFGP LK+HMQYC++HPEE++KLSK+K+ ++EVKGIMMDNIEK+LDRGE
Sbjct: 121 VAYNLDREFGPILKEHMQYCMSHPEEMSKLSKLKAQITEVKGIMMDNIEKVLDRGE 176



to top

>VA725_ARATH (O48850) Vesicle-associated membrane protein 725 (AtVAMP725)|
          Length = 285

 Score =  203 bits (516), Expect = 4e-52
 Identities = 95/175 (54%), Positives = 129/175 (73%)
 Frame = +2

Query: 101 KQTLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPSNSTRSTYSCDGHTFNFLVDRG 280
           +Q LIYSFVA+G+V+L E+T F GNF+ +A QCLQKLPS++ + TY+CDGHTFN+LV+ G
Sbjct: 68  QQNLIYSFVARGTVILVEYTEFKGNFTAVAAQCLQKLPSSNNKFTYNCDGHTFNYLVENG 127

Query: 281 FVFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFSI 460
           F + VVA E++GR +P  FLERV+EDF +RYG       Q                    
Sbjct: 128 FTYCVVAVESVGRQIPMAFLERVKEDFNKRYGGGKATTAQ-------------------- 167

Query: 461 AYNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           A +L+REFG +LK+HMQYC++HP+EI+KL+KVK+ ++EVKG+MM+NIEK+LDRGE
Sbjct: 168 ANSLNREFGSKLKEHMQYCVDHPDEISKLAKVKAQVTEVKGVMMENIEKVLDRGE 222



to top

>VA726_ARATH (Q9MAS5) Putative vesicle-associated membrane protein 726|
           (AtVAMP726)
          Length = 220

 Score =  201 bits (511), Expect = 1e-51
 Identities = 95/175 (54%), Positives = 128/175 (73%)
 Frame = +2

Query: 101 KQTLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPSNSTRSTYSCDGHTFNFLVDRG 280
           +Q+LIYSFVA+G+V+LAE+T F GNF+++A QCLQKLPS++ + TY+CDGHTFN+L D G
Sbjct: 3   QQSLIYSFVARGTVILAEYTEFKGNFTSVAAQCLQKLPSSNNKFTYNCDGHTFNYLADNG 62

Query: 281 FVFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFSI 460
           F + VV  E+ GR +P  FLERV+EDF +RYG       +                    
Sbjct: 63  FTYCVVVIESAGRQIPMAFLERVKEDFNKRYGGGKASTAK-------------------- 102

Query: 461 AYNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           A +L++EFG +LK+HMQYC +HPEEI+KLSKVK+ ++EVKG+MM+NIEK+LDRGE
Sbjct: 103 ANSLNKEFGSKLKEHMQYCADHPEEISKLSKVKAQVTEVKGVMMENIEKVLDRGE 157



to top

>VA722_ARATH (P47192) Vesicle-associated membrane protein 722 (AtVAMP722)|
           (Synaptobrevin-related protein 1)
          Length = 221

 Score =  200 bits (509), Expect = 2e-51
 Identities = 95/176 (53%), Positives = 130/176 (73%)
 Frame = +2

Query: 98  SKQTLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPSNSTRSTYSCDGHTFNFLVDR 277
           ++Q+LIYSFVA+G+V+L E T F GNF++IA QCLQKLPS++ + TY+CDGHTFN+LV+ 
Sbjct: 2   AQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVEN 61

Query: 278 GFVFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFS 457
           GF + VVA ++ GR +P  FLERV+EDF +RYG       Q                   
Sbjct: 62  GFTYCVVAVDSAGRQIPMAFLERVKEDFNKRYGGGKAATAQ------------------- 102

Query: 458 IAYNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
            A +L++EFG +LK+HMQYC++HP+EI+KL+KVK+ +SEVKG+MM+NIEK+LDRGE
Sbjct: 103 -ANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGE 157



to top

>VA721_ARATH (Q9ZTW3) Vesicle-associated membrane protein 721 (AtVAMP721)|
           (v-SNARE synaptobrevin 7B) (AtVAMP7B)
          Length = 219

 Score =  199 bits (505), Expect = 7e-51
 Identities = 95/176 (53%), Positives = 130/176 (73%)
 Frame = +2

Query: 98  SKQTLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPSNSTRSTYSCDGHTFNFLVDR 277
           ++Q+LIYSFVA+G+V+L E T F GNF++IA QCLQKLPS++ + TY+CDGHTFN+LV+ 
Sbjct: 2   AQQSLIYSFVARGTVILVEFTDFKGNFTSIAAQCLQKLPSSNNKFTYNCDGHTFNYLVED 61

Query: 278 GFVFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFS 457
           GF + VVA ++ GR +P  FLERV+EDF +RYG       Q                   
Sbjct: 62  GFTYCVVAVDSAGRQIPMSFLERVKEDFNKRYGGGKAATAQ------------------- 102

Query: 458 IAYNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
            A +L++EFG +LK+HMQYC++HP+EI+KL+KVK+ +SEVKG+MM+NIEK+LDRGE
Sbjct: 103 -ANSLNKEFGSKLKEHMQYCMDHPDEISKLAKVKAQVSEVKGVMMENIEKVLDRGE 157



to top

>VA723_ARATH (Q8VY69) Vesicle-associated membrane protein 723 (AtVAMP723)|
          Length = 217

 Score =  176 bits (447), Expect = 4e-44
 Identities = 84/175 (48%), Positives = 120/175 (68%)
 Frame = +2

Query: 98  SKQTLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPSNSTRSTYSCDGHTFNFLVDR 277
           ++Q+L YSF+A+G+V+L E T F GNF+++A Q L+ LPS++ + TY+CDGHTFN LV+ 
Sbjct: 2   AQQSLFYSFIARGTVILVEFTDFKGNFTSVAAQYLENLPSSNNKFTYNCDGHTFNDLVEN 61

Query: 278 GFVFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFS 457
           GF + VVA ++ GR +P  FLERV+EDF +RYG       Q                   
Sbjct: 62  GFTYCVVAVDSAGREIPMAFLERVKEDFYKRYGGEKAATDQ------------------- 102

Query: 458 IAYNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRG 622
            A +L++EFG  LK+HMQYC++HP+EI+ L+K K+ +SEVK +MM+NIEK+L RG
Sbjct: 103 -ANSLNKEFGSNLKEHMQYCMDHPDEISNLAKAKAQVSEVKSLMMENIEKVLARG 156



to top

>VA724_ARATH (O23429) Vesicle-associated membrane protein 724 (AtVAMP724)|
           (SYBL1-like protein)
          Length = 222

 Score =  173 bits (438), Expect = 4e-43
 Identities = 85/176 (48%), Positives = 123/176 (69%), Gaps = 1/176 (0%)
 Frame = +2

Query: 101 KQTLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPSNS-TRSTYSCDGHTFNFLVDR 277
           +++ IYSFVA+G+++LAE+T F+GNF +IA QCLQKLPS+S ++ TY+CD HTFNFLV+ 
Sbjct: 3   QESFIYSFVARGTMILAEYTEFTGNFPSIAAQCLQKLPSSSNSKFTYNCDHHTFNFLVED 62

Query: 278 GFVFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFS 457
           G+ + VVA+++L + +   FLERV+ DF +RYG                          +
Sbjct: 63  GYAYCVVAKDSLSKQISIAFLERVKADFKKRYGGG--------------------KASTA 102

Query: 458 IAYNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           IA +L++EFGP +K+HM Y ++H EEI KL KVK+ +SEVK IM++NI+K +DRGE
Sbjct: 103 IAKSLNKEFGPVMKEHMNYIVDHAEEIEKLIKVKAQVSEVKSIMLENIDKAIDRGE 158



to top

>VA711_ARATH (O49377) Vesicle-associated membrane protein 711 (AtVAMP711)|
           (v-SNARE synaptobrevin 7C) (AtVAMP7C)
          Length = 219

 Score =  110 bits (274), Expect = 4e-24
 Identities = 60/173 (34%), Positives = 100/173 (57%), Gaps = 1/173 (0%)
 Frame = +2

Query: 110 LIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPS-NSTRSTYSCDGHTFNFLVDRGFV 286
           ++Y+ VA+G+VVL+E TA S N STIA Q L+K+P  N +  +YS D + F+     G  
Sbjct: 3   ILYALVARGTVVLSEFTATSTNASTIAKQILEKVPGDNDSNVSYSQDRYVFHVKRTDGLT 62

Query: 287 FLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFSIAY 466
            L +AEE  GR +PF FLE + + F++ YG ++                       ++AY
Sbjct: 63  VLCMAEETAGRRIPFAFLEDIHQRFVRTYGRAV---------------------HTALAY 101

Query: 467 NLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
            ++ EF   L   + Y  N P   ++++++K  +++V+G+M++NI+K+LDRGE
Sbjct: 102 AMNEEFSRVLSQQIDYYSNDP-NADRINRIKGEMNQVRGVMIENIDKVLDRGE 153



to top

>VA713_ARATH (Q9LFP1) Vesicle-associated membrane protein 713 (AtVAMP713)|
          Length = 221

 Score =  105 bits (262), Expect = 1e-22
 Identities = 59/174 (33%), Positives = 102/174 (58%), Gaps = 2/174 (1%)
 Frame = +2

Query: 110 LIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPSNSTRS--TYSCDGHTFNFLVDRGF 283
           +I++ VA+G+VVL+E +A S N S+I+ Q L+KLP N + S  +YS D + F+     G 
Sbjct: 3   IIFALVARGTVVLSEFSATSTNASSISKQILEKLPGNDSDSHMSYSQDRYIFHVKRTDGL 62

Query: 284 VFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFSIA 463
             L +A+E  GR++PF FL+ + + F++ YG +I                       + A
Sbjct: 63  TVLCMADETAGRNIPFAFLDDIHQRFVKTYGRAIHS---------------------AQA 101

Query: 464 YNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           Y+++ EF   L   M++  N P   +++S++K  +S+V+ +M++NI+K+LDRGE
Sbjct: 102 YSMNDEFSRVLSQQMEFYSNDP-NADRMSRIKGEMSQVRNVMIENIDKVLDRGE 154



to top

>VA712_ARATH (Q9SIQ9) Vesicle-associated membrane protein 712 (AtVAMP712)|
          Length = 219

 Score =  100 bits (248), Expect = 5e-21
 Identities = 59/174 (33%), Positives = 97/174 (55%), Gaps = 1/174 (0%)
 Frame = +2

Query: 107 TLIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPSN-STRSTYSCDGHTFNFLVDRGF 283
           +++Y+ VA+G+VVLAE +  S N STIA Q L+K+P N  +  +YS D + F+     G 
Sbjct: 2   SILYALVARGTVVLAELSTTSTNASTIAKQILEKIPGNGDSHVSYSQDRYVFHVKRTDGL 61

Query: 284 VFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFSIA 463
             L +A+E  GR +PF FLE + + F++ YG +I                       + A
Sbjct: 62  TVLCMADEDAGRRIPFSFLEDIHQRFVRTYGRAIHS---------------------AQA 100

Query: 464 YNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           Y ++ EF   L   ++Y  N P   + +S++K  +++V+ +M++NI+ ILDRGE
Sbjct: 101 YAMNDEFSRVLNQQIEYYSNDP-NADTISRIKGEMNQVRDVMIENIDNILDRGE 153



to top

>VA714_ARATH (Q9FMR5) Vesicle-associated membrane protein 714 (AtVAMP714)|
          Length = 221

 Score = 93.6 bits (231), Expect = 4e-19
 Identities = 54/174 (31%), Positives = 94/174 (54%), Gaps = 2/174 (1%)
 Frame = +2

Query: 110 LIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPS--NSTRSTYSCDGHTFNFLVDRGF 283
           ++Y+ VA+G+VVLAE +A +GN   +  + L+KL    +  R  +S D + F+ L   G 
Sbjct: 3   IVYAVVARGTVVLAEFSAVTGNTGAVVRRILEKLSPEISDERLCFSQDRYIFHILRSDGL 62

Query: 284 VFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFSIA 463
            FL +A +  GR VPF +LE +   FM+ YG                          + A
Sbjct: 63  TFLCMANDTFGRRVPFSYLEEIHMRFMKNYGK---------------------VAHNAPA 101

Query: 464 YNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           Y ++ EF   L   M++  ++P  ++ L++V+  +SE++ +M++NIEKI++RG+
Sbjct: 102 YAMNDEFSRVLHQQMEFFSSNP-SVDTLNRVRGEVSEIRSVMVENIEKIMERGD 154



to top

>SYBL1_HUMAN (P51809) Synaptobrevin-like protein 1 (Tetanus insensitive VAMP)|
           (Ti-VAMP) (Ti-VAMP/VAMP7)
          Length = 219

 Score = 79.7 bits (195), Expect = 6e-15
 Identities = 46/174 (26%), Positives = 88/174 (50%), Gaps = 2/174 (1%)
 Frame = +2

Query: 110 LIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPSNSTRSTYSCDGHTFNFLVDRGFVF 289
           ++++ VA+G+ +LA+H    GNF  +  Q L K+PS + + TYS   + F+++     V+
Sbjct: 2   ILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYSHGNYLFHYICQDRIVY 61

Query: 290 LVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFSIAYN 469
           L + ++   RS  F FL  +++ F   YGS                       + ++ Y 
Sbjct: 62  LCITDDDFERSRAFNFLNEIKKRFQTTYGS---------------------RAQTALPYA 100

Query: 470 LDREFGPRLKDHMQYCINHPEE--INKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           ++ EF   L   +++   H E   ++K+ + ++ + E+KGIM+ NI+ +  RGE
Sbjct: 101 MNSEFSSVLAAQLKH---HSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGE 151



to top

>SYBL1_PONPY (Q5RF94) Synaptobrevin-like protein 1|
          Length = 219

 Score = 77.8 bits (190), Expect = 2e-14
 Identities = 45/174 (25%), Positives = 87/174 (50%), Gaps = 2/174 (1%)
 Frame = +2

Query: 110 LIYSFVAKGSVVLAEHTAFSGNFSTIAVQCLQKLPSNSTRSTYSCDGHTFNFLVDRGFVF 289
           ++++ VA+G+ +LA+H    GNF  +  Q L K+PS + + TY    + F+++     V+
Sbjct: 2   ILFAVVARGTTILAKHAWCGGNFLEVTEQILAKIPSENNKLTYPHGNYLFHYICQDRIVY 61

Query: 290 LVVAEEALGRSVPFVFLERVREDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFSIAYN 469
           L + ++   RS  F FL  +++ F   YGS                       + ++ Y 
Sbjct: 62  LCITDDDFERSRAFNFLNEIKKRFQTTYGS---------------------RAQTALPYA 100

Query: 470 LDREFGPRLKDHMQYCINHPEE--INKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           ++ EF   L   +++   H E   ++K+ + ++ + E+KGIM+ NI+ +  RGE
Sbjct: 101 MNSEFSSVLAAQLKH---HSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGE 151



to top

>SEC22_SCHPO (Q9Y7L0) Protein transport protein sec22|
          Length = 209

 Score = 52.8 bits (125), Expect = 8e-07
 Identities = 34/138 (24%), Positives = 59/138 (42%)
 Frame = +2

Query: 212 PSNSTRSTYSCDGHTFNFLVDRGFVFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDE 391
           P++  R++     +TF++L+D G  +L + E++  R + F +LE +  +F   +G    +
Sbjct: 38  PTSEKRASIESGDYTFHYLIDNGICYLCICEQSYPRKLAFSYLEELAGEFWNSFGEEALQ 97

Query: 392 EGQHPXXXXXXXXXXXXXXRFSIAYNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLS 571
            G  P              R    YN      PR  D+             L K+ + L 
Sbjct: 98  PGLRPYAFVQFDTFMQKSKR---VYNT-----PRANDN-------------LDKLNTELK 136

Query: 572 EVKGIMMDNIEKILDRGE 625
           +V  +M  NIE +L RG+
Sbjct: 137 DVTRVMTKNIEDLLYRGD 154



to top

>SC22B_PONPY (Q5RAI9) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
 Frame = +2

Query: 176 FSTIAVQCLQKLPSNS-TRSTYSCDGHTFNFLVDRGFVFLVVAEEALGRSVPFVFLERVR 352
           + + A Q  +KL   S TR T      TF++++++G  +LV+ E A  + + F +LE + 
Sbjct: 32  YQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLH 91

Query: 353 EDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFSIAYNLDREFGPRLKDHMQYCINHPE 532
            +F +++G  +                       S  Y+   EF   ++   +  I+   
Sbjct: 92  SEFDEQHGKKVP--------------------TVSRPYSF-IEFDTFIQKTKKLYIDSRA 130

Query: 533 EINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
             N L  + + L +V+ IM+ NIE++L RGE
Sbjct: 131 RRN-LGSINTELQDVQRIMVANIEEVLQRGE 160



to top

>SC22B_MOUSE (O08547) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
 Frame = +2

Query: 176 FSTIAVQCLQKLPSNS-TRSTYSCDGHTFNFLVDRGFVFLVVAEEALGRSVPFVFLERVR 352
           + + A Q  +KL   S TR T      TF++++++G  +LV+ E A  + + F +LE + 
Sbjct: 32  YQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLH 91

Query: 353 EDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFSIAYNLDREFGPRLKDHMQYCINHPE 532
            +F +++G  +                       S  Y+   EF   ++   +  I+   
Sbjct: 92  SEFDEQHGKKVP--------------------TVSRPYSF-IEFDTFIQKTKKLYIDSRA 130

Query: 533 EINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
             N L  + + L +V+ IM+ NIE++L RGE
Sbjct: 131 RRN-LGSINTELQDVQRIMVANIEEVLQRGE 160



to top

>SC22B_HUMAN (O75396) Vesicle trafficking protein SEC22b (SEC22 vesicle|
           trafficking protein-like 1)
          Length = 214

 Score = 50.1 bits (118), Expect = 5e-06
 Identities = 38/151 (25%), Positives = 70/151 (46%), Gaps = 1/151 (0%)
 Frame = +2

Query: 176 FSTIAVQCLQKLPSNS-TRSTYSCDGHTFNFLVDRGFVFLVVAEEALGRSVPFVFLERVR 352
           + + A Q  +KL   S TR T      TF++++++G  +LV+ E A  + + F +LE + 
Sbjct: 32  YQSQAKQLFRKLNEQSPTRCTLEAGAMTFHYIIEQGVCYLVLCEAAFPKKLAFAYLEDLH 91

Query: 353 EDFMQRYGSSIDEEGQHPXXXXXXXXXXXXXXRFSIAYNLDREFGPRLKDHMQYCINHPE 532
            +F +++G  +                       S  Y+   EF   ++   +  I+   
Sbjct: 92  SEFDEQHGKKVP--------------------TVSRPYSF-IEFDTFIQKTKKLYIDSRA 130

Query: 533 EINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
             N L  + + L +V+ IM+ NIE++L RGE
Sbjct: 131 RRN-LGSINTELQDVQRIMVANIEEVLQRGE 160



to top

>SEC22_ASHGO (Q74ZD2) Protein transport protein SEC22|
          Length = 214

 Score = 41.2 bits (95), Expect = 0.003
 Identities = 31/138 (22%), Positives = 53/138 (38%)
 Frame = +2

Query: 212 PSNSTRSTYSCDGHTFNFLVDRGFVFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDE 391
           P ++  +T     +  +++  +  V++V+ E    R++ F +L  VR +F   YG+   +
Sbjct: 43  PQSANEATLESGAYEMHYVRQQSVVYIVIVERGYPRNLAFAYLANVRHEFEHSYGNEYVK 102

Query: 392 EGQHPXXXXXXXXXXXXXXRFSIAYNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLS 571
               P              +    YN  R  G                   L ++ S L 
Sbjct: 103 PSVRPYAFVSFDNFLQKTKKI---YNDKRVQG------------------NLDQLNSDLL 141

Query: 572 EVKGIMMDNIEKILDRGE 625
            VK IM  NIE +L RG+
Sbjct: 142 GVKQIMTKNIEDLLYRGD 159



to top

>SEC22_KLULA (Q6CJA0) Protein transport protein SEC22|
          Length = 214

 Score = 36.6 bits (83), Expect = 0.062
 Identities = 29/138 (21%), Positives = 53/138 (38%)
 Frame = +2

Query: 212 PSNSTRSTYSCDGHTFNFLVDRGFVFLVVAEEALGRSVPFVFLERVREDFMQRYGSSIDE 391
           P+++  +T        +++     V++VVAE    R++ F +L  ++++F   YG  + +
Sbjct: 43  PTSANEATVESGDFEIHYIRLNTVVYIVVAERNYPRNLAFSYLADIQQEFEHSYGGQLSK 102

Query: 392 EGQHPXXXXXXXXXXXXXXRFSIAYNLDREFGPRLKDHMQYCINHPEEINKLSKVKSHLS 571
               P              +    YN  R  G                   + ++   L 
Sbjct: 103 SNVRPYEFVSFDNFLQKTKK---VYNDKRVQG------------------NMDQLNQDLK 141

Query: 572 EVKGIMMDNIEKILDRGE 625
            VK IM  NIE +L RG+
Sbjct: 142 GVKQIMTKNIEDLLYRGD 159



to top

>VAMPL_ARATH (Q84WF5) Probable VAMP-like protein At1g33485|
          Length = 255

 Score = 35.0 bits (79), Expect = 0.18
 Identities = 21/94 (22%), Positives = 44/94 (46%), Gaps = 2/94 (2%)
 Frame = +2

Query: 92  GGSKQTLIYSFVAKGSVVLAEHTAFSG--NFSTIAVQCLQKLPSNSTRSTYSCDGHTFNF 265
           G  + T+ Y  V++ + ++  +       N  ++A  CL+K P        +    TF F
Sbjct: 2   GSIQNTVHYCCVSRDNQIMYAYNNAGDHRNNESLAALCLEKTPPFHKWYFETRGKKTFGF 61

Query: 266 LVDRGFVFLVVAEEALGRSVPFVFLERVREDFMQ 367
           L+   FV+  + ++   +S    FLE++R++  +
Sbjct: 62  LMKDDFVYFAIVDDVFKKSSVLDFLEKLRDELKE 95



to top

>SNC2_YEAST (P33328) Synaptobrevin homolog 2|
          Length = 115

 Score = 33.5 bits (75), Expect = 0.53
 Identities = 13/34 (38%), Positives = 21/34 (61%)
 Frame = +2

Query: 524 HPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           +P   NK + ++  + +  GIM DNI K+ +RGE
Sbjct: 21  NPNSQNKTAALRQEIDDTVGIMRDNINKVAERGE 54



to top

>SNC1_YEAST (P31109) Synaptobrevin homolog 1|
          Length = 117

 Score = 30.4 bits (67), Expect = 4.5
 Identities = 12/44 (27%), Positives = 27/44 (61%)
 Frame = +2

Query: 494 LKDHMQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           L +H +    + +  ++ +++++ + +  GIM DNI K+ +RGE
Sbjct: 12  LSEHDEERPQNVQSKSRTAELQAEIDDTVGIMRDNINKVAERGE 55



to top

>VAMP4_MOUSE (O70480) Vesicle-associated membrane protein 4 (VAMP-4)|
          Length = 141

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +2

Query: 539 NKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           +K+  V++ + EV  +M +NI K+++RGE
Sbjct: 51  DKIKHVQNQVDEVIDVMQENITKVIERGE 79



to top

>VAMP4_HUMAN (O75379) Vesicle-associated membrane protein 4 (VAMP-4)|
          Length = 141

 Score = 30.0 bits (66), Expect = 5.8
 Identities = 11/29 (37%), Positives = 21/29 (72%)
 Frame = +2

Query: 539 NKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           +K+  V++ + EV  +M +NI K+++RGE
Sbjct: 51  DKIKHVQNQVDEVIDVMQENITKVIERGE 79



to top

>VAMP8_MOUSE (O70404) Vesicle-associated membrane protein 8 (VAMP-8)|
           (Endobrevin) (Edb)
          Length = 101

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 12/29 (41%), Positives = 20/29 (68%)
 Frame = +2

Query: 539 NKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           +++  ++S +  VK IM  N+E+IL RGE
Sbjct: 11  DRVRNLQSEVEGVKNIMTQNVERILSRGE 39



to top

>PRP5_YEAST (P21372) Pre-mRNA-processing ATP-dependent RNA helicase PRP5 (EC|
           3.6.1.-)
          Length = 849

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 26/100 (26%), Positives = 41/100 (41%), Gaps = 5/100 (5%)
 Frame = +2

Query: 341 ERVREDFMQR---YGSSIDEEGQHPXXXXXXXXXXXXXXRFSIAYNLDREFGP--RLKDH 505
           ERV+E+  +R   +  S +     P               F  + + D E G   R K+H
Sbjct: 65  ERVKEELRKRKNEFRKSDEPVSVKPSKKKSKRSKVKKKISFDFSDDDDSEIGVSFRSKEH 124

Query: 506 MQYCINHPEEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           +Q    H  E + L +  + L E K   M N + + DRG+
Sbjct: 125 IQKAPEHDNEKDPLDEFMTSLKEEK---MSNSKGMYDRGD 161



to top

>KLF2_MOUSE (Q60843) Krueppel-like factor 2 (Lung krueppel-like factor)|
          Length = 354

 Score = 29.6 bits (65), Expect = 7.6
 Identities = 25/63 (39%), Positives = 28/63 (44%), Gaps = 3/63 (4%)
 Frame = -1

Query: 449 GLQTGNHPHPRHQQVGVVPPHRYWTHIAA*---SLP*PSLGTQTARSFRVPLRPPQGTQN 279
           GL   N P P  Q     PP  Y+    A    S+P  SLGT+  R     L PPQG   
Sbjct: 54  GLGAENPPEPPPQPP---PPAFYYPEPGAPPPYSIPADSLGTELLRP---DLDPPQGPAL 107

Query: 278 HGR 270
           HGR
Sbjct: 108 HGR 110



to top

>SYB_APLCA (P35589) Synaptobrevin|
          Length = 180

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/32 (37%), Positives = 21/32 (65%)
 Frame = +2

Query: 530 EEINKLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           E+  +L + ++ + EV  IM  N+EK+LDR +
Sbjct: 17  EQSKRLQQTQAQVDEVVDIMRVNVEKVLDRDQ 48



to top

>SYB_DROME (P18489) Synaptobrevin|
          Length = 152

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 12/28 (42%), Positives = 20/28 (71%)
 Frame = +2

Query: 542 KLSKVKSHLSEVKGIMMDNIEKILDRGE 625
           KL + ++ + EV GIM  N+EK+L+R +
Sbjct: 47  KLQQTQAKVDEVVGIMRVNVEKVLERDQ 74



to top

>POPD2_HUMAN (Q9HBU9) Popeye domain-containing protein 2 (Popeye protein 2)|
          Length = 364

 Score = 29.3 bits (64), Expect = 10.0
 Identities = 16/34 (47%), Positives = 22/34 (64%)
 Frame = +3

Query: 354 KTSCSDMGPVSMRRDNTHLLMTRMRMISCLKTGL 455
           +TSCS    +S  R + HLL+T+ R ISCL + L
Sbjct: 206 ETSCSY---ISWPRKSLHLLLTKERYISCLFSAL 236


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 80,848,960
Number of Sequences: 219361
Number of extensions: 1546150
Number of successful extensions: 4515
Number of sequences better than 10.0: 30
Number of HSP's better than 10.0 without gapping: 4384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4493
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5767334219
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
to top