>HEM1_PHOLL (Q7N587) Glutamyl-tRNA reductase (EC 1.2.1.70) (GluTR)|
          Length = 420

 Score = 32.7 bits (73), Expect = 0.83
 Identities = 31/103 (30%), Positives = 45/103 (43%), Gaps = 7/103 (6%)
 Frame = +2

Query: 266 LDHKQEEQLFEDISNVLCELSQLHESLNPAHTEA-------NEAEKHYFNSSNVIDSTRK 424
           L  +Q++ L+E +   LCE  QL    NP   ++       NEA  H    ++ +DS   
Sbjct: 57  LSVEQQDNLYEQLIGWLCEYHQL----NPRELKSSIYWHCDNEAVSHLMRVASGLDSLVL 112

Query: 425 YNELATKLQGMCKSIRVALSNHVHREELELWPLFDKHFSVEEQ 553
                 ++ G  K    A S H H    EL  LF K FSV ++
Sbjct: 113 GEP---QILGQVKKA-FAESQHSHSLSSELERLFQKSFSVAKR 151

>NPIP_HUMAN (Q9UND3) Nuclear pore complex-interacting protein (NPIP)|
          Length = 350

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 27/113 (23%), Positives = 43/113 (38%), Gaps = 3/113 (2%)
 Frame = +2

Query: 191 NAEDEIVFPALESREPLHNVSHSYTLDHKQEEQLFEDISNVLCELSQLH---ESLNPAHT 361
           N  D+I      ++E L  +S       ++E Q+ E   N   ++ ++H   E    A  
Sbjct: 131 NRHDKINGKRKTAKEHLRKLSMKEREHGEKERQVSEAEENGKLDMKEIHTYMEMFQRAQA 190

Query: 362 EANEAEKHYFNSSNVIDSTRKYNELATKLQGMCKSIRVALSNHVHREELELWP 520
               AE +Y     +  S RK          +C  +R+A   H H   L  WP
Sbjct: 191 LRRRAEDYY--RCKITPSARK---------PLCNRVRMAAVEHRHSSGLPYWP 232

>LAMA_DROME (Q00174) Laminin alpha chain precursor|
          Length = 3712

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 15/66 (22%), Positives = 23/66 (34%)
 Frame = -1

Query: 351  GFKLSCSCESSQRTLDISSNNCSSCLWSRVYEWLTLCNGSLDSKAGNTISSSALLCAL*R 172
            G+ + C C     T D ++  CS C      +    C       A N      ++CA   
Sbjct: 1804 GYCIPCECNGHSETCDCATGICSKCQHGTEGDHCERCVSGYYGNATNGTPGDCMICACPL 1863

Query: 171  PHNKRN 154
            P +  N
Sbjct: 1864 PFDSNN 1869

>NALP2_HUMAN (Q9NX02) NACHT-, LRR- and PYD-containing protein 2 (PYRIN domain- and|
            NACHT domain-containing protein 1) (PYRIN-containing
            APAF1-like protein 2) (Nucleotide-binding site protein 1)
          Length = 1062

 Score = 25.8 bits (55), Expect(2) = 3.1
 Identities = 14/43 (32%), Positives = 20/43 (46%)
 Frame = -1

Query: 357  CAGFKLSCSCESSQRTLDISSNNCSSCLWSRVYEWLTLCNGSL 229
            C     + SC  S  TLD+  N   S     ++E LT  +G+L
Sbjct: 971  CEDLCSALSCNQSLVTLDLGQNPLGSSGVKMLFETLTCSSGTL 1013



 Score = 23.5 bits (49), Expect(2) = 3.1
 Identities = 18/59 (30%), Positives = 30/59 (50%), Gaps = 1/59 (1%)
 Frame = -3

Query: 511  LKFFSVDMIRQGDPDRLAHSLKLRSKLIVLSSRINHIR*IEIVFLC-FIRFSMCRVQAL 338
            L  ++ D+   G  D L   L+ +S L+ L   +NHI    + FLC  +R  +C ++ L
Sbjct: 902  LVLWNCDITSDGCCD-LTKLLQEKSSLLCLDLGLNHIGVKGMKFLCEALRKPLCNLRCL 959

>RAD50_NANEQ (P62135) DNA double-strand break repair rad50 ATPase|
          Length = 786

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 15/62 (24%), Positives = 32/62 (51%)
 Frame = +2

Query: 284 EQLFEDISNVLCELSQLHESLNPAHTEANEAEKHYFNSSNVIDSTRKYNELATKLQGMCK 463
           ++L +   N+L E+S++   +    ++  E EKH      + +  RK+ +L  KL  + K
Sbjct: 589 KELTKKKENLLSEISKVKGIIKEIESQIKEIEKHESTIKQLEEKKRKWEKLVEKLNRIVK 648

Query: 464 SI 469
           ++
Sbjct: 649 AL 650

>GLGB_CHLCV (Q823Y5) 1,4-alpha-glucan branching enzyme (EC 2.4.1.18) (Glycogen|
           branching enzyme) (BE)
           (1,4-alpha-D-glucan:1,4-alpha-D-glucan
           6-glucosyl-transferase)
          Length = 719

 Score = 30.8 bits (68), Expect = 3.2
 Identities = 14/52 (26%), Positives = 31/52 (59%)
 Frame = +2

Query: 182 AHSNAEDEIVFPALESREPLHNVSHSYTLDHKQEEQLFEDISNVLCELSQLH 337
           A ++ + E ++ +++ ++PLH   H+YT D++  E +   I + L  L ++H
Sbjct: 342 ALASFDGEALYESVDHKDPLHPHWHTYTFDYRCSEVVNFLIGSALFWLDKMH 393

>AKAP9_HUMAN (Q99996) A-kinase anchor protein 9 (Protein kinase A-anchoring|
            protein 9) (PRKA9) (A-kinase anchor protein 450 kDa)
            (AKAP 450) (A-kinase anchor protein 350 kDa) (AKAP 350)
            (hgAKAP 350) (AKAP 120-like protein) (Hyperion protein)
            (Yotiao protei
          Length = 3911

 Score = 30.4 bits (67), Expect = 4.1
 Identities = 21/70 (30%), Positives = 34/70 (48%), Gaps = 1/70 (1%)
 Frame = +2

Query: 266  LDHKQEEQLFEDISNVLCELSQLHESLNPAHTE-ANEAEKHYFNSSNVIDSTRKYNELAT 442
            L+  +E++L  DIS +   +S+L   +   HT    E E+      NV++  +K  EL  
Sbjct: 2601 LNQLREDELGSDISALTLRISELESQVVEMHTSLILEKEQVEIAEKNVLEKEKKLLELQK 2660

Query: 443  KLQGMCKSIR 472
             L+G  K  R
Sbjct: 2661 LLEGNEKKQR 2670

>PMIP_SCHPO (Q10415) Probable mitochondrial intermediate peptidase,|
           mitochondrial precursor (EC 3.4.24.59) (MIP)
          Length = 762

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 28/107 (26%), Positives = 48/107 (44%), Gaps = 13/107 (12%)
 Frame = +2

Query: 170 GLYRAHSNAEDEIVFPALE--SREPLHNVSHSYTLDHKQEEQL----FEDISNVLCELSQ 331
           GL+R H  ++ +  F  L   + E    V     L+  ++  +    F+ ISN+LC +  
Sbjct: 65  GLFRNHFLSDKDTGFLRLAETASEKCKAVIEDLLLEDTEDGSIVVSKFDRISNLLCSVID 124

Query: 332 LHESLNPAHTE------ANEAEKHYFNSSNVIDSTR-KYNELATKLQ 451
           L E +  AH +      A EA  + F   N +++ +  Y +L   LQ
Sbjct: 125 LFEFVRCAHPDKMVVMKAEEAYSYLFELMNTLNTHQGLYEKLKCSLQ 171

>RAD50_SCHPO (Q9UTJ8) DNA repair protein rad50 (EC 3.6.-.-)|
          Length = 1290

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 26/83 (31%), Positives = 34/83 (40%)
 Frame = +2

Query: 203 EIVFPALESREPLHNVSHSYTLDHKQEEQLFEDISNVLCELSQLHESLNPAHTEANEAEK 382
           EI+FP    RE          L  K   Q +E  S  L EL   H+      T  +  E 
Sbjct: 454 EILFPVKLQREDFTKDVEKSDLWIKSLRQEYE--SKNLLELLDKHQ------TALSSVEN 505

Query: 383 HYFNSSNVIDSTRKYNELATKLQ 451
                S ++DS  KY+ + TKLQ
Sbjct: 506 RLDEISEIVDSYHKYSGVRTKLQ 528

>Y1209_CAMJE (Q9PN86) UPF0144 protein Cj1209|
          Length = 517

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 21/82 (25%), Positives = 39/82 (47%), Gaps = 1/82 (1%)
 Frame = +2

Query: 191 NAEDEIVFPALESREPLHNVSHSYTLDHKQEEQLFEDISNVLCELSQLHESLNPAHTEAN 370
           +A++ I+   LE ++     +H +  D  Q+   F+D+S    +L Q  E L        
Sbjct: 54  DAKNSILNAELEVKKKYEEKTHKFQKDFNQK---FDDLSKKEQKLQQEEEKLKEDKEYLC 110

Query: 371 EAEKHYFNSSNVIDSTR-KYNE 433
           +++KH  N  + +D  + KY E
Sbjct: 111 KSQKHIQNLQSDVDKLKNKYQE 132

>MTA3_MOUSE (Q924K8) Metastasis-associated protein MTA3|
          Length = 591

 Score = 30.0 bits (66), Expect = 5.4
 Identities = 25/70 (35%), Positives = 32/70 (45%), Gaps = 7/70 (10%)
 Frame = +2

Query: 299 DISNVLCELSQLH------ESLNPAHTEANEAEKHYFNSSNVIDSTRKYNEL-ATKLQGM 457
           DISN L  L+  H      ES  P   +  E +KH      +  S R+Y  L AT ++G 
Sbjct: 50  DISNTLIMLADKHAKETEEESETPVEADLTEKQKHQLKHRELFLS-RQYESLPATHIRGK 108

Query: 458 CKSIRVALSN 487
           C    VAL N
Sbjct: 109 CS---VALLN 115

>ITPR2_BOVIN (Q8WN96) Inositol 1,4,5-trisphosphate receptor type 2 (Type 2|
            inositol 1,4,5-trisphosphate receptor) (Type 2 InsP3
            receptor) (IP3 receptor isoform 2) (InsP3R2)
          Length = 2701

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 22/106 (20%), Positives = 41/106 (38%), Gaps = 6/106 (5%)
 Frame = +2

Query: 191  NAEDEIVFPALESREPLHNV------SHSYTLDHKQEEQLFEDISNVLCELSQLHESLNP 352
            + E+  + PA+   +P+         +H+  L H    Q  +   N++CE  Q  + +  
Sbjct: 1905 STEEVTMSPAIAIMQPISRFLQLLCENHNRELQHFLRNQNNKTNYNLVCETLQFLDCICG 1964

Query: 353  AHTEANEAEKHYFNSSNVIDSTRKYNELATKLQGMCKSIRVALSNH 490
            + T        Y N  NV+   +    L    QG C   +  ++ H
Sbjct: 1965 STTGGLGLLGLYINEKNVVLVNQTLESLTEYCQGPCHENQTCIATH 2010

>PURA_WOLTR (Q5GT12) Adenylosuccinate synthetase (EC 6.3.4.4) (IMP--aspartate|
           ligase) (AdSS) (AMPSase)
          Length = 435

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 14/59 (23%), Positives = 28/59 (47%)
 Frame = +2

Query: 38  IDTIFKFHKAIRKDLEYLDVESGKLIDGDESCLRQFIGRFRLLWGLYRAHSNAEDEIVF 214
           +DT+  +H AIRK L Y  ++  +++   E    + I   + +W +         +I+F
Sbjct: 162 LDTLLNYHNAIRKGLSYRVIKKEEMLREIEEIAEKIIPYRKPVWKILNDFVKEGKKIIF 220

>PDC6I_XENLA (Q9W6C5) Programmed cell death 6-interacting protein (Signal|
           transduction protein Xp95)
          Length = 867

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 28/117 (23%), Positives = 49/117 (41%), Gaps = 12/117 (10%)
 Frame = +2

Query: 194 AEDEIVFPALESREPLHNVSHSYTLDHKQEEQLFEDISNVLCELSQLHESLNPAHTEANE 373
           A+D  V     S   L  +  SYT   ++  +  ED+ N +    Q    +  +++EAN 
Sbjct: 588 AQDGAVNEEAISVTELDQIYGSYTYKVQENLKKQEDLLNNIQSAHQEFSKMKQSNSEANL 647

Query: 374 AEKHYFN-----------SSNVIDSTRKYNELA-TKLQGMCKSIRVALSNHVHREEL 508
            E+   N            +N+ + T+ YN+L    L+  CK   +  +    R+EL
Sbjct: 648 REEVLKNLAVGHDNYIELVANLKEGTKFYNDLTDILLKFQCKCSDIVFARKTERDEL 704

>F51A1_HUMAN (Q9NWZ8) Protein FAM51A1|
          Length = 242

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 11/40 (27%), Positives = 22/40 (55%)
 Frame = +2

Query: 419 RKYNELATKLQGMCKSIRVALSNHVHREELELWPLFDKHF 538
           R Y + A K+Q M  +++++   H  R++ + WP+    F
Sbjct: 203 RLYGDSAAKIQAMEAAVQLSFDKHCDRKQPKYWPVIPLKF 242

>OTU6B_BRARE (Q7ZV00) OTU domain-containing protein 6B|
          Length = 293

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 33/115 (28%), Positives = 53/115 (46%), Gaps = 21/115 (18%)
 Frame = +2

Query: 269 DHKQEEQLFEDISNVLCELSQLHES-LNPAHTEANEAEKHYFNSSNVID----------- 412
           D K+ +QL EDI+ +  ELSQ HE+ L   +T + E      +S +V +           
Sbjct: 37  DKKRRKQLTEDIAKLEAELSQKHENELKLQNTSSVEEVSDALDSMSVANHEEQSDPSKQS 96

Query: 413 STRKYNELATKLQGMCK--SIRVA------LSNHVHREELEL-WPLFDKHFSVEE 550
            T K  +   K   + K   +R+A      LS   H+E L+L   L ++H  ++E
Sbjct: 97  RTSKAQKRRDKKAALEKEREMRIAEAEVENLSGSRHQEGLKLREKLVERHLQIKE 151

>YKH5_YEAST (P36083) Hypothetical 52.1 kDa protein in SMY1-MUD2 intergenic|
           region
          Length = 450

 Score = 29.6 bits (65), Expect = 7.0
 Identities = 21/93 (22%), Positives = 40/93 (43%), Gaps = 2/93 (2%)
 Frame = +2

Query: 173 LYRAHSNAEDEIVFPALESREPLHNVSHSYTLDHKQEEQLFEDISNVLCE--LSQLHESL 346
           + ++H N     +FP L  +   HN++  +T     E+ +F  I     E  ++   E +
Sbjct: 179 MVKSHKN-----LFPTLTEQIIQHNINQDFTESTYDEDYVFSSIWANFMEGLINHYLEKV 233

Query: 347 NPAHTEANEAEKHYFNSSNVIDSTRKYNELATK 445
              ++E    ++ Y     +I    +YNEL  K
Sbjct: 234 IVPYSEMKVCQQLYKPMMKIISLYNEYNELMVK 266

>MEK1_SCHPO (Q10292) Meiosis-specific serine/threonine-protein kinase mek1 (EC|
           2.7.11.1)
          Length = 445

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 16/56 (28%), Positives = 32/56 (57%), Gaps = 4/56 (7%)
 Frame = +2

Query: 305 SNVLCELSQLHES-LNPAHTEANEAEKHYFNSSN---VIDSTRKYNELATKLQGMC 460
           + +LCELSQ+ ES ++P +TE +   + +  SS+    + + +KY +++      C
Sbjct: 15  TQILCELSQIDESTMDPQYTEDDVLARLFVFSSSSPQTVLNVKKYEDVSVGRSNTC 70

>SMG1_MOUSE (Q8BKX6) Serine/threonine-protein kinase SMG1 (EC 2.7.11.1) (SMG-1)|
          Length = 3658

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 584  LYQLYDLQAYPVPPPKNVCQTMATTQVLL 498
            LY+ Y++Q  P PPP  VCQ +  T++ L
Sbjct: 2681 LYRKYEMQYAPQPPP-TVCQFITATEMTL 2708

>SMG1_HUMAN (Q96Q15) Serine/threonine-protein kinase SMG1 (EC 2.7.11.1) (SMG-1)|
            (hSMG-1) (Lambda/iota protein kinase C-interacting
            protein) (Lambda-interacting protein) (61E3.4)
          Length = 3657

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 13/29 (44%), Positives = 19/29 (65%)
 Frame = -2

Query: 584  LYQLYDLQAYPVPPPKNVCQTMATTQVLL 498
            LY+ Y++Q  P PPP  VCQ +  T++ L
Sbjct: 2679 LYRKYEMQYAPQPPP-TVCQFITATEMTL 2706

>PSNA_ARATH (O64668) Presenilin-like protein At1g08700|
          Length = 453

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 22/77 (28%), Positives = 34/77 (44%), Gaps = 3/77 (3%)
 Frame = +3

Query: 120 VMNLAFASSLEDFVYCGVFIGRTAM---LRMKSCFLL*NQESRCTM*AIHTLLTTSRKSN 290
           + N      L DF++  V +GR AM   + + +C+L       CT   +  L   +R   
Sbjct: 363 ISNRGIKLGLGDFIFYSVLVGRAAMYDLMTVYACYLAIISGLGCT---LILLSVYNRALP 419

Query: 291 CLKIYLMFSVSFHNYTR 341
            L I +M  V F+  TR
Sbjct: 420 ALPISIMLGVVFYFLTR 436

>NODAL_MOUSE (P43021) Nodal precursor|
          Length = 354

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 13/53 (24%), Positives = 24/53 (45%)
 Frame = -2

Query: 272 GQECMNGSHCATALLILKQETRFHPQHCCAPYKDPTINEIFQ*TGEGKIHHHR 114
           G+E    +H     L+ + +    P  CCAP K   ++ ++   G   + HH+
Sbjct: 292 GEEFHPTNHAYIQSLLKRYQPHRVPSTCCAPVKTKPLSMLYVDNGRVLLEHHK 344

>BLMH_CHICK (P87362) Bleomycin hydrolase (EC 3.4.22.40) (BLM hydrolase) (BMH)|
           (BH) (Aminopeptidase H)
          Length = 455

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 14/44 (31%), Positives = 26/44 (59%), Gaps = 1/44 (2%)
 Frame = +2

Query: 380 KHYFNSSNVIDSTRKYNELAT-KLQGMCKSIRVALSNHVHREEL 508
           K YF  S+  ++TR+ NE+   K++  C  +R  ++   ++EEL
Sbjct: 162 KKYFPESHTTEATRRMNEILNHKMREYCLRLRNMVATGTNKEEL 205

>YCX6_YEAST (P25651) Hypothetical protein YCR086W|
          Length = 190

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 21/74 (28%), Positives = 33/74 (44%), Gaps = 4/74 (5%)
 Frame = +2

Query: 170 GLYRAHSNAEDEIVFPALESREPLHNVSHSYTLDHKQEEQLFEDISNVLCELSQLH---- 337
           G  +  +   + I  P L+ R    +    Y+L  K  E LFE +S  L  L+Q +    
Sbjct: 121 GFVKGQAQVTEVIYAPVLKQR----STEELYSLQSKLPEYLFETLSFPLSSLNQFYNKIA 176

Query: 338 ESLNPAHTEANEAE 379
           +SLN    + +E E
Sbjct: 177 KSLNKKREKKDETE 190

>COA3_AAV2 (P03135) Probable coat protein 3|
          Length = 504

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 24/94 (25%), Positives = 39/94 (41%)
 Frame = +2

Query: 170 GLYRAHSNAEDEIVFPALESREPLHNVSHSYTLDHKQEEQLFEDISNVLCELSQLHESLN 349
           G  + H N  D +V PA+ S              HK +E+ F   S VL    Q  E  N
Sbjct: 302 GATKYHLNGRDSLVNPAMAS--------------HKDDEEKFFPQSGVLIFGKQGSEKTN 347

Query: 350 PAHTEANEAEKHYFNSSNVIDSTRKYNELATKLQ 451
               +    ++    ++N + +T +Y  ++T LQ
Sbjct: 348 VNIEKVMITDEEEIGTTNPV-ATEQYGSVSTNLQ 380

>RPOB_MANSM (Q65W41) DNA-directed RNA polymerase beta chain (EC 2.7.7.6) (RNAP|
            beta subunit) (Transcriptase beta chain) (RNA polymerase
            beta subunit)
          Length = 1342

 Score = 29.3 bits (64), Expect = 9.2
 Identities = 13/36 (36%), Positives = 25/36 (69%), Gaps = 1/36 (2%)
 Frame = +2

Query: 23   ASQXPIDTIFKFHKAIRKDLEY-LDVESGKLIDGDE 127
            A Q  ++ + + ++ +RKD E+ L+V+ GK+I GD+
Sbjct: 1007 AKQNQLEQLAEQYEELRKDFEHKLEVKRGKIIQGDD 1042


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,676,143
Number of Sequences: 219361
Number of extensions: 1583241
Number of successful extensions: 4644
Number of sequences better than 10.0: 26
Number of HSP's better than 10.0 without gapping: 4494
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4639
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5310515667
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)