| Clone Name | baal30o13 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_192122.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 3192 Score = 601 bits (303), Expect = e-168 Identities = 519/590 (87%), Gaps = 1/590 (0%) Strand = Plus / Plus Query: 14 gttctgatggcatctcaagnaccaattgataccatattcaaatttcacaaggcgattcgt 73 |||| |||||||| ||||| ||||| ||||| |||||||||||||| || || ||||| Sbjct: 1397 gttcagatggcatatcaagg-ccaatcgatactatattcaaatttcataaagcaattcgc 1455 Query: 74 aaggatttagagtacctagatgttgaatctggaaagctcatcgatggtgatgaatcttgc 133 ||||| |||||||||||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 1456 aaggacttagagtacctagatgttgaatctggaaagcttattgatggtgatgagtcttgt 1515 Query: 134 cttcgccagttcattggaagatttcgtttattgtggggtctttatagggcgcacagcaat 193 ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||| Sbjct: 1516 cttcgccagttcattggaagattccgtttattgtggggtctttacagggcacacagtaat 1575 Query: 194 gctgaggatgaaatcgtgtttcctgctttagaatcaagagagccgttgcacaatgtgagc 253 |||||||||||||| || |||||||||||||||||||||||| | ||||||||||| || Sbjct: 1576 gctgaggatgaaattgtttttcctgctttagaatcaagagagacattgcacaatgtcagt 1635 Query: 254 cattcatacactcttgaccacaagcaggaagagcaattgtttgaagatatatctaatgtt 313 || || |||||||||||||||||||| ||||| ||||| |||| |||||||||| ||| Sbjct: 1636 cactcgtacactcttgaccacaagcaagaagaacaattatttggagatatatctgatgcc 1695 Query: 314 ctctgtgagctttcacaactacacgagagcttgaacccggcacatactgaagcgaatgaa 373 ||| ||||||||| || ||||| ||||| |||| || | || | ||||| | |||| Sbjct: 1696 ctcgctgagctttcgcagctacatgagaggttgacccacccccacattgaagtcagtgaa 1755 Query: 374 gcagagaaacactatttcaattcatctaatgtgattgattcgactagaaagtacaatgag 433 ||||||||| || |||| ||||| ||| ||| |||||||| ||||||||||||||| ||| Sbjct: 1756 gcagagaaaaacgattttaattcctctgatgagattgattggactagaaagtacaacgag 1815 Query: 434 cttgctacgaagcttcaaggaatgtgcaagtctatccgggtcgccttgtctaatcatgtc 493 ||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 1816 cttgccacaaagcttcaaggaatgtgcaagtctatccgggctgcattgactaatcatgtc 1875 Query: 494 cacagagaagaacttgagttgtggccattgtttgacaaacatttttcggtggaggaacag 553 || |||||||||||||||||||||||||||||||| | |||||||| |||||||||||| Sbjct: 1876 catagagaagaacttgagttgtggccattgtttgatgagcatttttctgtggaggaacag 1935 Query: 554 gataagcttgtaggtcgtataattggtacaacaggtgctgaggttctcca 603 ||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 1936 gataagcttgtaggtcgtataattggttcaactggtgctgaggttctcca 1985
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 601 bits (303), Expect = e-168 Identities = 519/590 (87%), Gaps = 1/590 (0%) Strand = Plus / Minus Query: 14 gttctgatggcatctcaagnaccaattgataccatattcaaatttcacaaggcgattcgt 73 |||| |||||||| ||||| ||||| ||||| |||||||||||||| || || ||||| Sbjct: 28446985 gttcagatggcatatcaagg-ccaatcgatactatattcaaatttcataaagcaattcgc 28446927 Query: 74 aaggatttagagtacctagatgttgaatctggaaagctcatcgatggtgatgaatcttgc 133 ||||| |||||||||||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 28446926 aaggacttagagtacctagatgttgaatctggaaagcttattgatggtgatgagtcttgt 28446867 Query: 134 cttcgccagttcattggaagatttcgtttattgtggggtctttatagggcgcacagcaat 193 ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||| Sbjct: 28446866 cttcgccagttcattggaagattccgtttattgtggggtctttacagggcacacagtaat 28446807 Query: 194 gctgaggatgaaatcgtgtttcctgctttagaatcaagagagccgttgcacaatgtgagc 253 |||||||||||||| || |||||||||||||||||||||||| | ||||||||||| || Sbjct: 28446806 gctgaggatgaaattgtttttcctgctttagaatcaagagagacattgcacaatgtcagt 28446747 Query: 254 cattcatacactcttgaccacaagcaggaagagcaattgtttgaagatatatctaatgtt 313 || || |||||||||||||||||||| ||||| ||||| |||| |||||||||| ||| Sbjct: 28446746 cactcgtacactcttgaccacaagcaagaagaacaattatttggagatatatctgatgcc 28446687 Query: 314 ctctgtgagctttcacaactacacgagagcttgaacccggcacatactgaagcgaatgaa 373 ||| ||||||||| || ||||| ||||| |||| || | || | ||||| | |||| Sbjct: 28446686 ctcgctgagctttcgcagctacatgagaggttgacccacccccacattgaagtcagtgaa 28446627 Query: 374 gcagagaaacactatttcaattcatctaatgtgattgattcgactagaaagtacaatgag 433 ||||||||| || |||| ||||| ||| ||| |||||||| ||||||||||||||| ||| Sbjct: 28446626 gcagagaaaaacgattttaattcctctgatgagattgattggactagaaagtacaacgag 28446567 Query: 434 cttgctacgaagcttcaaggaatgtgcaagtctatccgggtcgccttgtctaatcatgtc 493 ||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 28446566 cttgccacaaagcttcaaggaatgtgcaagtctatccgggctgcattgactaatcatgtc 28446507 Query: 494 cacagagaagaacttgagttgtggccattgtttgacaaacatttttcggtggaggaacag 553 || |||||||||||||||||||||||||||||||| | |||||||| |||||||||||| Sbjct: 28446506 catagagaagaacttgagttgtggccattgtttgatgagcatttttctgtggaggaacag 28446447 Query: 554 gataagcttgtaggtcgtataattggtacaacaggtgctgaggttctcca 603 ||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 28446446 gataagcttgtaggtcgtataattggttcaactggtgctgaggttctcca 28446397
>dbj|AP003455.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0519D04 Length = 193068 Score = 601 bits (303), Expect = e-168 Identities = 519/590 (87%), Gaps = 1/590 (0%) Strand = Plus / Minus Query: 14 gttctgatggcatctcaagnaccaattgataccatattcaaatttcacaaggcgattcgt 73 |||| |||||||| ||||| ||||| ||||| |||||||||||||| || || ||||| Sbjct: 162085 gttcagatggcatatcaagg-ccaatcgatactatattcaaatttcataaagcaattcgc 162027 Query: 74 aaggatttagagtacctagatgttgaatctggaaagctcatcgatggtgatgaatcttgc 133 ||||| |||||||||||||||||||||||||||||||| || ||||||||||| ||||| Sbjct: 162026 aaggacttagagtacctagatgttgaatctggaaagcttattgatggtgatgagtcttgt 161967 Query: 134 cttcgccagttcattggaagatttcgtttattgtggggtctttatagggcgcacagcaat 193 ||||||||||||||||||||||| |||||||||||||||||||| ||||| ||||| ||| Sbjct: 161966 cttcgccagttcattggaagattccgtttattgtggggtctttacagggcacacagtaat 161907 Query: 194 gctgaggatgaaatcgtgtttcctgctttagaatcaagagagccgttgcacaatgtgagc 253 |||||||||||||| || |||||||||||||||||||||||| | ||||||||||| || Sbjct: 161906 gctgaggatgaaattgtttttcctgctttagaatcaagagagacattgcacaatgtcagt 161847 Query: 254 cattcatacactcttgaccacaagcaggaagagcaattgtttgaagatatatctaatgtt 313 || || |||||||||||||||||||| ||||| ||||| |||| |||||||||| ||| Sbjct: 161846 cactcgtacactcttgaccacaagcaagaagaacaattatttggagatatatctgatgcc 161787 Query: 314 ctctgtgagctttcacaactacacgagagcttgaacccggcacatactgaagcgaatgaa 373 ||| ||||||||| || ||||| ||||| |||| || | || | ||||| | |||| Sbjct: 161786 ctcgctgagctttcgcagctacatgagaggttgacccacccccacattgaagtcagtgaa 161727 Query: 374 gcagagaaacactatttcaattcatctaatgtgattgattcgactagaaagtacaatgag 433 ||||||||| || |||| ||||| ||| ||| |||||||| ||||||||||||||| ||| Sbjct: 161726 gcagagaaaaacgattttaattcctctgatgagattgattggactagaaagtacaacgag 161667 Query: 434 cttgctacgaagcttcaaggaatgtgcaagtctatccgggtcgccttgtctaatcatgtc 493 ||||| || ||||||||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 161666 cttgccacaaagcttcaaggaatgtgcaagtctatccgggctgcattgactaatcatgtc 161607 Query: 494 cacagagaagaacttgagttgtggccattgtttgacaaacatttttcggtggaggaacag 553 || |||||||||||||||||||||||||||||||| | |||||||| |||||||||||| Sbjct: 161606 catagagaagaacttgagttgtggccattgtttgatgagcatttttctgtggaggaacag 161547 Query: 554 gataagcttgtaggtcgtataattggtacaacaggtgctgaggttctcca 603 ||||||||||||||||||||||||||| |||| ||||||||||||||||| Sbjct: 161546 gataagcttgtaggtcgtataattggttcaactggtgctgaggttctcca 161497
>ref|XM_475859.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 2988 Score = 256 bits (129), Expect = 7e-65 Identities = 255/297 (85%) Strand = Plus / Plus Query: 35 ccaattgataccatattcaaatttcacaaggcgattcgtaaggatttagagtacctagat 94 |||||||| || |||||||||||||| ||||| ||||| || ||||| |||| | ||||| Sbjct: 1528 ccaattgacacaatattcaaatttcataaggcaattcgcaaagatttggagttcttagat 1587 Query: 95 gttgaatctggaaagctcatcgatggtgatgaatcttgccttcgccagttcattggaaga 154 || |||||| |||||||||| ||||| |||||||||| ||||||||| ||||| ||||| Sbjct: 1588 gtggaatctagaaagctcatagatggggatgaatcttcccttcgccaattcatcggaagg 1647 Query: 155 tttcgtttattgtggggtctttatagggcgcacagcaatgctgaggatgaaatcgtgttt 214 ||||||||| |||||||||||||||| || |||||||||||||| |||||||| || ||| Sbjct: 1648 tttcgtttactgtggggtctttatagagcacacagcaatgctgaagatgaaattgtattt 1707 Query: 215 cctgctttagaatcaagagagccgttgcacaatgtgagccattcatacactcttgaccac 274 |||||| | ||||| | |||| | |||||||||| ||||| ||||| |||||||||||| Sbjct: 1708 cctgctcttgaatcgaaagagacactgcacaatgtcagccactcatatactcttgaccac 1767 Query: 275 aagcaggaagagcaattgtttgaagatatatctaatgttctctgtgagctttcacaa 331 ||||||||||| |||| ||| |||||||||| | | |||| | ||||||||||||| Sbjct: 1768 aagcaggaagaagaattatttaaagatatatccactattctttttgagctttcacaa 1824 Score = 170 bits (86), Expect = 3e-39 Identities = 140/158 (88%) Strand = Plus / Plus Query: 443 aagcttcaaggaatgtgcaagtctatccgggtcgccttgtctaatcatgtccacagagaa 502 |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| Sbjct: 1936 aagcttcaaggaatgtgcaagtctatccgggttactctgtctaatcatgtccatagagaa 1995 Query: 503 gaacttgagttgtggccattgtttgacaaacatttttcggtggaggaacaggataagctt 562 |||||||| ||||||||| | ||||| ||||||||||| || ||||| ||||||||| || Sbjct: 1996 gaacttgaattgtggccactatttgataaacatttttctgtagaggagcaggataagatt 2055 Query: 563 gtaggtcgtataattggtacaacaggtgctgaggttct 600 ||||| ||||||||||| | ||||| ||||||||||| Sbjct: 2056 gtaggccgtataattggaagtacaggagctgaggttct 2093
>gb|AC129717.3| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0079H23, complete sequence Length = 191765 Score = 256 bits (129), Expect = 7e-65 Identities = 255/297 (85%) Strand = Plus / Plus Query: 35 ccaattgataccatattcaaatttcacaaggcgattcgtaaggatttagagtacctagat 94 |||||||| || |||||||||||||| ||||| ||||| || ||||| |||| | ||||| Sbjct: 33220 ccaattgacacaatattcaaatttcataaggcaattcgcaaagatttggagttcttagat 33279 Query: 95 gttgaatctggaaagctcatcgatggtgatgaatcttgccttcgccagttcattggaaga 154 || |||||| |||||||||| ||||| |||||||||| ||||||||| ||||| ||||| Sbjct: 33280 gtggaatctagaaagctcatagatggggatgaatcttcccttcgccaattcatcggaagg 33339 Query: 155 tttcgtttattgtggggtctttatagggcgcacagcaatgctgaggatgaaatcgtgttt 214 ||||||||| |||||||||||||||| || |||||||||||||| |||||||| || ||| Sbjct: 33340 tttcgtttactgtggggtctttatagagcacacagcaatgctgaagatgaaattgtattt 33399 Query: 215 cctgctttagaatcaagagagccgttgcacaatgtgagccattcatacactcttgaccac 274 |||||| | ||||| | |||| | |||||||||| ||||| ||||| |||||||||||| Sbjct: 33400 cctgctcttgaatcgaaagagacactgcacaatgtcagccactcatatactcttgaccac 33459 Query: 275 aagcaggaagagcaattgtttgaagatatatctaatgttctctgtgagctttcacaa 331 ||||||||||| |||| ||| |||||||||| | | |||| | ||||||||||||| Sbjct: 33460 aagcaggaagaagaattatttaaagatatatccactattctttttgagctttcacaa 33516 Score = 170 bits (86), Expect = 3e-39 Identities = 140/158 (88%) Strand = Plus / Plus Query: 443 aagcttcaaggaatgtgcaagtctatccgggtcgccttgtctaatcatgtccacagagaa 502 |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| Sbjct: 33628 aagcttcaaggaatgtgcaagtctatccgggttactctgtctaatcatgtccatagagaa 33687 Query: 503 gaacttgagttgtggccattgtttgacaaacatttttcggtggaggaacaggataagctt 562 |||||||| ||||||||| | ||||| ||||||||||| || ||||| ||||||||| || Sbjct: 33688 gaacttgaattgtggccactatttgataaacatttttctgtagaggagcaggataagatt 33747 Query: 563 gtaggtcgtataattggtacaacaggtgctgaggttct 600 ||||| ||||||||||| | ||||| ||||||||||| Sbjct: 33748 gtaggccgtataattggaagtacaggagctgaggttct 33785
>gb|AC135925.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone P0560C03, complete sequence Length = 177861 Score = 256 bits (129), Expect = 7e-65 Identities = 255/297 (85%) Strand = Plus / Plus Query: 35 ccaattgataccatattcaaatttcacaaggcgattcgtaaggatttagagtacctagat 94 |||||||| || |||||||||||||| ||||| ||||| || ||||| |||| | ||||| Sbjct: 89648 ccaattgacacaatattcaaatttcataaggcaattcgcaaagatttggagttcttagat 89707 Query: 95 gttgaatctggaaagctcatcgatggtgatgaatcttgccttcgccagttcattggaaga 154 || |||||| |||||||||| ||||| |||||||||| ||||||||| ||||| ||||| Sbjct: 89708 gtggaatctagaaagctcatagatggggatgaatcttcccttcgccaattcatcggaagg 89767 Query: 155 tttcgtttattgtggggtctttatagggcgcacagcaatgctgaggatgaaatcgtgttt 214 ||||||||| |||||||||||||||| || |||||||||||||| |||||||| || ||| Sbjct: 89768 tttcgtttactgtggggtctttatagagcacacagcaatgctgaagatgaaattgtattt 89827 Query: 215 cctgctttagaatcaagagagccgttgcacaatgtgagccattcatacactcttgaccac 274 |||||| | ||||| | |||| | |||||||||| ||||| ||||| |||||||||||| Sbjct: 89828 cctgctcttgaatcgaaagagacactgcacaatgtcagccactcatatactcttgaccac 89887 Query: 275 aagcaggaagagcaattgtttgaagatatatctaatgttctctgtgagctttcacaa 331 ||||||||||| |||| ||| |||||||||| | | |||| | ||||||||||||| Sbjct: 89888 aagcaggaagaagaattatttaaagatatatccactattctttttgagctttcacaa 89944 Score = 170 bits (86), Expect = 3e-39 Identities = 140/158 (88%) Strand = Plus / Plus Query: 443 aagcttcaaggaatgtgcaagtctatccgggtcgccttgtctaatcatgtccacagagaa 502 |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| Sbjct: 90056 aagcttcaaggaatgtgcaagtctatccgggttactctgtctaatcatgtccatagagaa 90115 Query: 503 gaacttgagttgtggccattgtttgacaaacatttttcggtggaggaacaggataagctt 562 |||||||| ||||||||| | ||||| ||||||||||| || ||||| ||||||||| || Sbjct: 90116 gaacttgaattgtggccactatttgataaacatttttctgtagaggagcaggataagatt 90175 Query: 563 gtaggtcgtataattggtacaacaggtgctgaggttct 600 ||||| ||||||||||| | ||||| ||||||||||| Sbjct: 90176 gtaggccgtataattggaagtacaggagctgaggttct 90213
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 256 bits (129), Expect = 7e-65 Identities = 255/297 (85%) Strand = Plus / Plus Query: 35 ccaattgataccatattcaaatttcacaaggcgattcgtaaggatttagagtacctagat 94 |||||||| || |||||||||||||| ||||| ||||| || ||||| |||| | ||||| Sbjct: 27158252 ccaattgacacaatattcaaatttcataaggcaattcgcaaagatttggagttcttagat 27158311 Query: 95 gttgaatctggaaagctcatcgatggtgatgaatcttgccttcgccagttcattggaaga 154 || |||||| |||||||||| ||||| |||||||||| ||||||||| ||||| ||||| Sbjct: 27158312 gtggaatctagaaagctcatagatggggatgaatcttcccttcgccaattcatcggaagg 27158371 Query: 155 tttcgtttattgtggggtctttatagggcgcacagcaatgctgaggatgaaatcgtgttt 214 ||||||||| |||||||||||||||| || |||||||||||||| |||||||| || ||| Sbjct: 27158372 tttcgtttactgtggggtctttatagagcacacagcaatgctgaagatgaaattgtattt 27158431 Query: 215 cctgctttagaatcaagagagccgttgcacaatgtgagccattcatacactcttgaccac 274 |||||| | ||||| | |||| | |||||||||| ||||| ||||| |||||||||||| Sbjct: 27158432 cctgctcttgaatcgaaagagacactgcacaatgtcagccactcatatactcttgaccac 27158491 Query: 275 aagcaggaagagcaattgtttgaagatatatctaatgttctctgtgagctttcacaa 331 ||||||||||| |||| ||| |||||||||| | | |||| | ||||||||||||| Sbjct: 27158492 aagcaggaagaagaattatttaaagatatatccactattctttttgagctttcacaa 27158548 Score = 170 bits (86), Expect = 3e-39 Identities = 140/158 (88%) Strand = Plus / Plus Query: 443 aagcttcaaggaatgtgcaagtctatccgggtcgccttgtctaatcatgtccacagagaa 502 |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| Sbjct: 27158660 aagcttcaaggaatgtgcaagtctatccgggttactctgtctaatcatgtccatagagaa 27158719 Query: 503 gaacttgagttgtggccattgtttgacaaacatttttcggtggaggaacaggataagctt 562 |||||||| ||||||||| | ||||| ||||||||||| || ||||| ||||||||| || Sbjct: 27158720 gaacttgaattgtggccactatttgataaacatttttctgtagaggagcaggataagatt 27158779 Query: 563 gtaggtcgtataattggtacaacaggtgctgaggttct 600 ||||| ||||||||||| | ||||| ||||||||||| Sbjct: 27158780 gtaggccgtataattggaagtacaggagctgaggttct 27158817
>dbj|AK068028.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013131L14, full insert sequence Length = 2693 Score = 256 bits (129), Expect = 7e-65 Identities = 255/297 (85%) Strand = Plus / Plus Query: 35 ccaattgataccatattcaaatttcacaaggcgattcgtaaggatttagagtacctagat 94 |||||||| || |||||||||||||| ||||| ||||| || ||||| |||| | ||||| Sbjct: 833 ccaattgacacaatattcaaatttcataaggcaattcgcaaagatttggagttcttagat 892 Query: 95 gttgaatctggaaagctcatcgatggtgatgaatcttgccttcgccagttcattggaaga 154 || |||||| |||||||||| ||||| |||||||||| ||||||||| ||||| ||||| Sbjct: 893 gtggaatctagaaagctcatagatggggatgaatcttcccttcgccaattcatcggaagg 952 Query: 155 tttcgtttattgtggggtctttatagggcgcacagcaatgctgaggatgaaatcgtgttt 214 ||||||||| |||||||||||||||| || |||||||||||||| |||||||| || ||| Sbjct: 953 tttcgtttactgtggggtctttatagagcacacagcaatgctgaagatgaaattgtattt 1012 Query: 215 cctgctttagaatcaagagagccgttgcacaatgtgagccattcatacactcttgaccac 274 |||||| | ||||| | |||| | |||||||||| ||||| ||||| |||||||||||| Sbjct: 1013 cctgctcttgaatcgaaagagacactgcacaatgtcagccactcatatactcttgaccac 1072 Query: 275 aagcaggaagagcaattgtttgaagatatatctaatgttctctgtgagctttcacaa 331 ||||||||||| |||| ||| |||||||||| | | |||| | ||||||||||||| Sbjct: 1073 aagcaggaagaagaattatttaaagatatatccactattctttttgagctttcacaa 1129 Score = 170 bits (86), Expect = 3e-39 Identities = 140/158 (88%) Strand = Plus / Plus Query: 443 aagcttcaaggaatgtgcaagtctatccgggtcgccttgtctaatcatgtccacagagaa 502 |||||||||||||||||||||||||||||||| | |||||||||||||||| |||||| Sbjct: 1241 aagcttcaaggaatgtgcaagtctatccgggttactctgtctaatcatgtccatagagaa 1300 Query: 503 gaacttgagttgtggccattgtttgacaaacatttttcggtggaggaacaggataagctt 562 |||||||| ||||||||| | ||||| ||||||||||| || ||||| ||||||||| || Sbjct: 1301 gaacttgaattgtggccactatttgataaacatttttctgtagaggagcaggataagatt 1360 Query: 563 gtaggtcgtataattggtacaacaggtgctgaggttct 600 ||||| ||||||||||| | ||||| ||||||||||| Sbjct: 1361 gtaggccgtataattggaagtacaggagctgaggttct 1398
>gb|AF532781.1| Zea mays putative zinc finger protein mRNA, complete cds Length = 1561 Score = 117 bits (59), Expect = 4e-23 Identities = 77/83 (92%) Strand = Plus / Plus Query: 521 ttgtttgacaaacatttttcggtggaggaacaggataagcttgtaggtcgtataattggt 580 |||||||| ||||||||||| |||||||| || ||||| ||||||||||||||||||||| Sbjct: 2 ttgtttgataaacatttttctgtggaggagcaagataaacttgtaggtcgtataattggt 61 Query: 581 acaacaggtgctgaggttctcca 603 |||||||||||||||||||||| Sbjct: 62 tcaacaggtgctgaggttctcca 84
>gb|AC135462.22| Medicago truncatula clone mth2-35o17, complete sequence Length = 118383 Score = 79.8 bits (40), Expect = 1e-11 Identities = 127/156 (81%) Strand = Plus / Minus Query: 148 tggaagatttcgtttattgtggggtctttatagggcgcacagcaatgctgaggatgaaat 207 |||||| |||||| | ||||||||| | ||||| || || || || || || ||||| || Sbjct: 89758 tggaaggtttcgtcttttgtggggtttatatagagctcatagtaacgcagaagatgatat 89699 Query: 208 cgtgtttcctgctttagaatcaagagagccgttgcacaatgtgagccattcatacactct 267 || ||||| || |||||||| | |||| | | |||||||||||||||||||||| | Sbjct: 89698 agtatttccagcattagaatccaaagaggcccttcacaatgtgagccattcatacatgtt 89639 Query: 268 tgaccacaagcaggaagagcaattgtttgaagatat 303 ||||| ||||||||||| ||||||||||||||||| Sbjct: 89638 ggaccataagcaggaagaacaattgtttgaagatat 89603 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Minus Query: 515 tggccattgtttgacaaacatttttcggtggaggaacaggataagcttgtaggtcgtata 574 ||||||||||||| |||||||| || ||||| ||||| |||||| | ||||| || ||| Sbjct: 89388 tggccattgtttgggaaacatttctctgtggaagaacaagataagatagtaggccggata 89329 Query: 575 attggtacaacaggtgctgaggttctcca 603 ||||| || ||||||||||| |||||||| Sbjct: 89328 attggaactacaggtgctgaagttctcca 89300 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Minus Query: 34 accaattgataccatattcaaatttcacaaggcgattcgtaaggatttagagtacctaga 93 |||||||||||||||||| ||||| || || || || ||||| || || ||||| |||| Sbjct: 89872 accaattgataccatatttaaattccataaagctatacgtaaagacttggagtatttaga 89813 Query: 94 tgttgaatctggaaagct 111 |||||||||||||||||| Sbjct: 89812 tgttgaatctggaaagct 89795
>gb|AC150205.5| Medicago truncatula clone mth2-72l17, complete sequence Length = 130555 Score = 79.8 bits (40), Expect = 1e-11 Identities = 127/156 (81%) Strand = Plus / Plus Query: 148 tggaagatttcgtttattgtggggtctttatagggcgcacagcaatgctgaggatgaaat 207 |||||| |||||| | ||||||||| | ||||| || || || || || || ||||| || Sbjct: 50826 tggaaggtttcgtcttttgtggggtttatatagagctcatagtaacgcagaagatgatat 50885 Query: 208 cgtgtttcctgctttagaatcaagagagccgttgcacaatgtgagccattcatacactct 267 || ||||| || |||||||| | |||| | | |||||||||||||||||||||| | Sbjct: 50886 agtatttccagcattagaatccaaagaggcccttcacaatgtgagccattcatacatgtt 50945 Query: 268 tgaccacaagcaggaagagcaattgtttgaagatat 303 ||||| ||||||||||| ||||||||||||||||| Sbjct: 50946 ggaccataagcaggaagaacaattgtttgaagatat 50981 Score = 73.8 bits (37), Expect = 6e-10 Identities = 76/89 (85%) Strand = Plus / Plus Query: 515 tggccattgtttgacaaacatttttcggtggaggaacaggataagcttgtaggtcgtata 574 ||||||||||||| |||||||| || ||||| ||||| |||||| | ||||| || ||| Sbjct: 51196 tggccattgtttgggaaacatttctctgtggaagaacaagataagatagtaggccggata 51255 Query: 575 attggtacaacaggtgctgaggttctcca 603 ||||| || ||||||||||| |||||||| Sbjct: 51256 attggaactacaggtgctgaagttctcca 51284 Score = 67.9 bits (34), Expect = 4e-08 Identities = 67/78 (85%) Strand = Plus / Plus Query: 34 accaattgataccatattcaaatttcacaaggcgattcgtaaggatttagagtacctaga 93 |||||||||||||||||| ||||| || || || || ||||| || || ||||| |||| Sbjct: 50712 accaattgataccatatttaaattccataaagctatacgtaaagacttggagtatttaga 50771 Query: 94 tgttgaatctggaaagct 111 |||||||||||||||||| Sbjct: 50772 tgttgaatctggaaagct 50789
>dbj|AP004915.1| Lotus japonicus genomic DNA, chromosome 4, clone:LjT16G15, TM0073, complete sequence Length = 90077 Score = 73.8 bits (37), Expect = 6e-10 Identities = 175/221 (79%) Strand = Plus / Minus Query: 83 gagtacctagatgttgaatctggaaagctcatcgatggtgatgaatcttgccttcgccag 142 ||||| |||||||| ||||||||||| || | ||||||||||| | ||||| || Sbjct: 53916 gagtatctagatgtcgaatctggaaaactgagtcatggtgatgaaaccattcttcggcac 53857 Query: 143 ttcattggaagatttcgtttattgtggggtctttatagggcgcacagcaatgctgaggat 202 || | ||||||||||||| | ||||||||| | ||||| || || || |||||||| ||| Sbjct: 53856 tttagtggaagatttcgtcttttgtggggtttatatagagctcatagtaatgctgaagat 53797 Query: 203 gaaatcgtgtttcctgctttagaatcaagagagccgttgcacaatgtgagccattcatac 262 || || || ||||| || | ||||| | |||| | | || |||||||| ||||||||| Sbjct: 53796 gacatagtatttccagcactggaatccaaagaggcacttcataatgtgagtcattcatac 53737 Query: 263 actcttgaccacaagcaggaagagcaattgtttgaagatat 303 | || ||||| ||||||||||| ||| ||||||||||||| Sbjct: 53736 atgctagaccataagcaggaagaacaactgtttgaagatat 53696
>ref|NM_112713.2| Arabidopsis thaliana EMB2454; protein binding / ubiquitin-protein ligase/ zinc ion binding AT3G18290 (EMB2454) mRNA, complete cds Length = 4229 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 47 atattcaaatttcacaaggcgattcgtaaggatttagagtacctagatgttgaatctgga 106 |||||||| ||||||||||| || | || ||| |||||| || ||||||||||||||| Sbjct: 2309 atattcaagtttcacaaggccataagcaaagatctagagtttcttgatgttgaatctgga 2368 Query: 107 aagctcat 114 |||||||| Sbjct: 2369 aagctcat 2376 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 561 ttgtaggtcgtataattggtacaacaggtgctgaggttct 600 |||| ||||||||||| || ||||| |||||||| ||||| Sbjct: 2826 ttgtgggtcgtataatcggaacaacgggtgctgaagttct 2865
>gb|AY094471.1| Arabidopsis thaliana AT3g18290/MIE15_8 mRNA, complete cds Length = 4229 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 47 atattcaaatttcacaaggcgattcgtaaggatttagagtacctagatgttgaatctgga 106 |||||||| ||||||||||| || | || ||| |||||| || ||||||||||||||| Sbjct: 2309 atattcaagtttcacaaggccataagcaaagatctagagtttcttgatgttgaatctgga 2368 Query: 107 aagctcat 114 |||||||| Sbjct: 2369 aagctcat 2376 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 561 ttgtaggtcgtataattggtacaacaggtgctgaggttct 600 |||| ||||||||||| || ||||| |||||||| ||||| Sbjct: 2826 ttgtgggtcgtataatcggaacaacgggtgctgaagttct 2865
>gb|BT005819.1| Arabidopsis thaliana At3g18290/MIE15_8 gene, complete cds Length = 3765 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 47 atattcaaatttcacaaggcgattcgtaaggatttagagtacctagatgttgaatctgga 106 |||||||| ||||||||||| || | || ||| |||||| || ||||||||||||||| Sbjct: 1996 atattcaagtttcacaaggccataagcaaagatctagagtttcttgatgttgaatctgga 2055 Query: 107 aagctcat 114 |||||||| Sbjct: 2056 aagctcat 2063 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 561 ttgtaggtcgtataattggtacaacaggtgctgaggttct 600 |||| ||||||||||| || ||||| |||||||| ||||| Sbjct: 2513 ttgtgggtcgtataatcggaacaacgggtgctgaagttct 2552
>dbj|AP000414.1| Arabidopsis thaliana genomic DNA, chromosome 3, P1 clone: MIE15 Length = 34067 Score = 56.0 bits (28), Expect = 1e-04 Identities = 58/68 (85%) Strand = Plus / Plus Query: 47 atattcaaatttcacaaggcgattcgtaaggatttagagtacctagatgttgaatctgga 106 |||||||| ||||||||||| || | || ||| |||||| || ||||||||||||||| Sbjct: 29586 atattcaagtttcacaaggccataagcaaagatctagagtttcttgatgttgaatctgga 29645 Query: 107 aagctcat 114 |||||||| Sbjct: 29646 aagctcat 29653 Score = 40.1 bits (20), Expect = 8.2 Identities = 35/40 (87%) Strand = Plus / Plus Query: 561 ttgtaggtcgtataattggtacaacaggtgctgaggttct 600 |||| ||||||||||| || ||||| |||||||| ||||| Sbjct: 30103 ttgtgggtcgtataatcggaacaacgggtgctgaagttct 30142
>gb|DQ333376.1| Triticum aestivum calcium-dependent protein kinase (CPK2B) mRNA, complete cds Length = 1939 Score = 44.1 bits (22), Expect = 0.53 Identities = 22/22 (100%) Strand = Plus / Minus Query: 108 agctcatcgatggtgatgaatc 129 |||||||||||||||||||||| Sbjct: 1480 agctcatcgatggtgatgaatc 1459
>gb|BC098643.1| Rattus norvegicus cardiotrophin-like cytokine factor 1, mRNA (cDNA clone MGC:112574 IMAGE:7123848), complete cds Length = 1891 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catacactcttgaccacaag 277 |||||||||||||||||||| Sbjct: 89 catacactcttgaccacaag 108
>ref|XM_722428.1| Plasmodium yoelii yoelii str. 17XNL CCAAT-box DNA binding protein subunit B (PY00879) partial mRNA Length = 6357 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 187 cagcaatgctgaggatgaaa 206 |||||||||||||||||||| Sbjct: 1623 cagcaatgctgaggatgaaa 1642
>gb|U41012.1| Caenorhabditis elegans cosmid C06A6, complete sequence Length = 28409 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 aagagcaattgtttgaagat 301 |||||||||||||||||||| Sbjct: 23230 aagagcaattgtttgaagat 23249
>ref|NM_207615.2| Rattus norvegicus cardiotrophin-like cytokine factor 1 (Clcf1), mRNA Length = 1891 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 258 catacactcttgaccacaag 277 |||||||||||||||||||| Sbjct: 89 catacactcttgaccacaag 108
>gb|AC159890.2| Mus musculus BAC clone RP24-80J11 from chromosome 9, complete sequence Length = 226770 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 attgtttgaagatatatcta 308 |||||||||||||||||||| Sbjct: 166240 attgtttgaagatatatcta 166221
>gb|AC063962.11| Homo sapiens chromosome 10 clone RP11-222G7, complete sequence Length = 171818 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 ttcctgctttagaatcaaga 232 |||||||||||||||||||| Sbjct: 6174 ttcctgctttagaatcaaga 6193
>dbj|AB225755.1| Aspergillus oryzae cDNA, contig sequence: AoEST2610 Length = 1051 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 attcggcacgagggttctga 20 |||||||||||||||||||| Sbjct: 2 attcggcacgagggttctga 21
>gb|AC018511.5| Homo sapiens chromosome 10 clone RP11-77G23, complete sequence Length = 159519 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 213 ttcctgctttagaatcaaga 232 |||||||||||||||||||| Sbjct: 65817 ttcctgctttagaatcaaga 65798
>dbj|AP007167.1| Aspergillus oryzae RIB40 genomic DNA, SC020 Length = 1824958 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 135 ttcgccagttcattggaaga 154 |||||||||||||||||||| Sbjct: 1671542 ttcgccagttcattggaaga 1671523
>gb|AC008589.6| Homo sapiens chromosome 5 clone CTC-574I1, complete sequence Length = 121272 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 acagagaagaacttgagttg 514 |||||||||||||||||||| Sbjct: 11344 acagagaagaacttgagttg 11325
>gb|AC008927.6| Homo sapiens chromosome 5 clone CTD-2287O23, complete sequence Length = 165604 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 acagagaagaacttgagttg 514 |||||||||||||||||||| Sbjct: 17392 acagagaagaacttgagttg 17373
>ref|NM_171911.2| Caenorhabditis elegans C06A6.2a (C06A6.2) mRNA, complete cds Length = 2118 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 aagagcaattgtttgaagat 301 |||||||||||||||||||| Sbjct: 821 aagagcaattgtttgaagat 840
>ref|NM_171386.2| Caenorhabditis elegans C06A6.2b (C06A6.2) mRNA, complete cds Length = 2127 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 282 aagagcaattgtttgaagat 301 |||||||||||||||||||| Sbjct: 821 aagagcaattgtttgaagat 840
>gb|AC008779.5|AC008779 Homo sapiens chromosome 5 clone CTD-2023H18, complete sequence Length = 123275 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 495 acagagaagaacttgagttg 514 |||||||||||||||||||| Sbjct: 53315 acagagaagaacttgagttg 53296
>gb|AC022311.5| Homo sapiens BAC clone RP11-146M24 from 2, complete sequence Length = 154084 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcatctaatgtgattgattc 414 |||||||||||||||||||| Sbjct: 23583 tcatctaatgtgattgattc 23564
>emb|Z75263.1|SCYOR355W S.cerevisiae chromosome XV reading frame ORF YOR355w Length = 3996 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcatctaatgtgattgattc 414 |||||||||||||||||||| Sbjct: 3459 tcatctaatgtgattgattc 3440
>emb|CT030644.8| Mouse DNA sequence from clone RP24-82E11 on chromosome 9, complete sequence Length = 211707 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 289 attgtttgaagatatatcta 308 |||||||||||||||||||| Sbjct: 105337 attgtttgaagatatatcta 105318
>gb|U18262.1|SCU18262 Saccharomyces cerevisiae Gds1p (GDS1) gene, complete cds Length = 2455 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 395 tcatctaatgtgattgattc 414 |||||||||||||||||||| Sbjct: 1879 tcatctaatgtgattgattc 1860 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,337,917 Number of Sequences: 3902068 Number of extensions: 5337917 Number of successful extensions: 101855 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101731 Number of HSP's gapped (non-prelim): 124 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)