ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal31d12 |
|---|---|
| Clone Library Name | barley_pub |
>NUP3_PENSQ (P24504) Nuclease PA3 (EC 3.1.3.6) (Endonuclease PA3)| (Deoxyribonuclease PA3) Length = 270 Score = 85.9 bits (211), Expect = 8e-17 Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 3/149 (2%) Frame = +1 Query: 127 WSAEGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWPDQVRHWYKYRWTSPLH 306 W A GH +AQ + P AA + +L + L+++ W D+ R +W++ LH Sbjct: 1 WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60 Query: 307 FIDTPDKA---CTFDYARDCHDPSGAKDMCVAGAVANFTSQLMHYKQGSADRKYNLTEAL 477 FID D C DY RDC C A+AN+T ++ S+ N EAL Sbjct: 61 FIDAEDNPPTNCNVDYERDC-----GSSGCSISAIANYTQRV----SDSSLSSENHAEAL 111 Query: 478 LFLSHFMGDIHQPMHVGFTSDMGGNSVNL 564 FL HF+GD+ QP+H +GGN +N+ Sbjct: 112 RFLVHFIGDMTQPLH-DEAYAVGGNKINV 139
>NUP1_PENCI (P24289) Nuclease P1 (EC 3.1.30.1) (Endonuclease P1)| (Deoxyribonuclease P1) Length = 270 Score = 85.9 bits (211), Expect = 8e-17 Identities = 50/149 (33%), Positives = 73/149 (48%), Gaps = 3/149 (2%) Frame = +1 Query: 127 WSAEGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWPDQVRHWYKYRWTSPLH 306 W A GH +AQ + P AA + +L + L+++ W D+ R +W++ LH Sbjct: 1 WGALGHATVAYVAQHYVSPEAASWAQGILGSSSSSYLASIASWADEYRLTSAGKWSASLH 60 Query: 307 FIDTPDKA---CTFDYARDCHDPSGAKDMCVAGAVANFTSQLMHYKQGSADRKYNLTEAL 477 FID D C DY RDC C A+AN+T ++ S+ N EAL Sbjct: 61 FIDAEDNPPTNCNVDYERDC-----GSSGCSISAIANYTQRV----SDSSLSSENHAEAL 111 Query: 478 LFLSHFMGDIHQPMHVGFTSDMGGNSVNL 564 FL HF+GD+ QP+H +GGN +N+ Sbjct: 112 RFLVHFIGDMTQPLH-DEAYAVGGNKINV 139
>NUS1_ASPOR (P24021) Nuclease S1 precursor (EC 3.1.30.1) (Endonuclease S1)| (Single-stranded-nucleate endonuclease) (Deoxyribonuclease S1) Length = 287 Score = 76.3 bits (186), Expect = 6e-14 Identities = 46/160 (28%), Positives = 73/160 (45%), Gaps = 3/160 (1%) Frame = +1 Query: 100 LISAPAARAWSAEGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWPDQVRHWY 279 L A W GH IAQ + + +N+L +++ L+ + W D ++ Sbjct: 12 LALAQLTYGWGNLGHETVAYIAQSFVASSTESFCQNILGDDSTSYLANVATWADTYKYTD 71 Query: 280 KYRWTSPLHFI---DTPDKACTFDYARDCHDPSGAKDMCVAGAVANFTSQLMHYKQGSAD 450 ++ P HFI D P ++C DY RDC C A+ N+T+ L+ GS Sbjct: 72 AGEFSKPYHFIDAQDNPPQSCGVDYDRDCGSAG-----CSISAIQNYTNILLESPNGS-- 124 Query: 451 RKYNLTEALLFLSHFMGDIHQPMHVGFTSDMGGNSVNLRW 570 AL F+ H +GDIHQP+H + GGN +++ + Sbjct: 125 ---EALNALKFVVHIIGDIHQPLH-DENLEAGGNGIDVTY 160
>AMPM1_HUMAN (P53582) Methionine aminopeptidase 1 (EC 3.4.11.18) (MetAP 1) (MAP| 1) (Peptidase M 1) Length = 386 Score = 32.7 bits (73), Expect = 0.78 Identities = 21/75 (28%), Positives = 34/75 (45%) Frame = +1 Query: 136 EGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWPDQVRHWYKYRWTSPLHFID 315 EG L C++A+++L+ AA + EE + C+ R+ Y SPL++ + Sbjct: 137 EGMRLVCRLAREVLDVAAGMIKPGVTTEEIDHAVHLACI----ARNCYP----SPLNYYN 188 Query: 316 TPDKACTFDYARDCH 360 P CT CH Sbjct: 189 FPKSCCTSVNEVICH 203
>AMPM1_MOUSE (Q8BP48) Methionine aminopeptidase 1 (EC 3.4.11.18) (MetAP 1) (MAP| 1) (Peptidase M 1) Length = 386 Score = 32.3 bits (72), Expect = 1.0 Identities = 21/75 (28%), Positives = 34/75 (45%) Frame = +1 Query: 136 EGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWPDQVRHWYKYRWTSPLHFID 315 EG L C++A+++L+ AA + EE + C+ R+ Y SPL++ + Sbjct: 137 EGMRLVCRLAREVLDIAAGMIKAGVTTEEIDHAVHLACI----ARNCYP----SPLNYYN 188 Query: 316 TPDKACTFDYARDCH 360 P CT CH Sbjct: 189 FPKSCCTSVNEVICH 203
>PHLD_BACCE (P33376) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) (Cereolysin A) Length = 283 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Frame = +1 Query: 343 YARDCHDPSGAKDMCVAGAVANFTSQLMHYKQGSADRKYNLTEALLFLS---HFMGDIHQ 513 +A +DP K A T G + + ++ +A +L H++GD++Q Sbjct: 104 FASHFYDPDNGKTYIPYAKQAKETGAKYFKLAGESYKNKDMKQAFFYLGLSLHYLGDVNQ 163 Query: 514 PMH 522 PMH Sbjct: 164 PMH 166
>PHLC_BACCE (P09598) Phospholipase C precursor (EC 3.1.4.3) (PLC)| (Phosphatidylcholine cholinephosphohydrolase) (Cereolysin A) Length = 283 Score = 30.8 bits (68), Expect = 3.0 Identities = 16/63 (25%), Positives = 28/63 (44%), Gaps = 3/63 (4%) Frame = +1 Query: 343 YARDCHDPSGAKDMCVAGAVANFTSQLMHYKQGSADRKYNLTEALLFLS---HFMGDIHQ 513 +A +DP K A T G + + ++ +A +L H++GD++Q Sbjct: 104 FASHFYDPDNGKTYIPFAKQAKETGAKYFKLAGESYKNKDMKQAFFYLGLSLHYLGDVNQ 163 Query: 514 PMH 522 PMH Sbjct: 164 PMH 166
>DUS5_RAT (O54838) Dual specificity protein phosphatase 5 (EC 3.1.3.48) (EC| 3.1.3.16) (MAP-kinase phosphatase CPG21) Length = 384 Score = 30.4 bits (67), Expect = 3.9 Identities = 17/49 (34%), Positives = 24/49 (48%) Frame = +1 Query: 187 AAQAVKNLLPEEAGGDLSAMCVWPDQVRHWYKYRWTSPLHFIDTPDKAC 333 A +A + L +E GG ++A+ V RHW K R S + T AC Sbjct: 67 ADEAARARLLQEGGGGVAAVVVLDQGSRHWQKLREESAARVVLTSLLAC 115
>DUS5_HUMAN (Q16690) Dual specificity protein phosphatase 5 (EC 3.1.3.48) (EC| 3.1.3.16) (Dual specificity protein phosphatase hVH3) Length = 384 Score = 30.4 bits (67), Expect = 3.9 Identities = 21/76 (27%), Positives = 32/76 (42%) Frame = +1 Query: 193 QAVKNLLPEEAGGDLSAMCVWPDQVRHWYKYRWTSPLHFIDTPDKACTFDYARDCHDPSG 372 +A + L +E GG ++A+ V RHW K R S + T AC P+G Sbjct: 69 EAARARLLQEGGGGVAAVVVLDQGSRHWQKLREESAARVVLTSLLACL---------PAG 119 Query: 373 AKDMCVAGAVANFTSQ 420 + + G F S+ Sbjct: 120 PRVYFLKGGYETFYSE 135
>SYS_SILPO (Q5LR07) Seryl-tRNA synthetase (EC 6.1.1.11) (Serine--tRNA ligase)| (SerRS) Length = 430 Score = 29.6 bits (65), Expect = 6.6 Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 17/149 (11%) Frame = +1 Query: 103 ISAPAARAWSAEGHMLTCQIAQDLLEPAAAQAVKNLLPEEAGGDLSAMCVWP-------- 258 + A AR AE L +A+ E AA QA L + L+ + P Sbjct: 58 VGAAKARGDEAEFERLRALVAEKKAEIAAMQAEAKELDTQLSELLAGLPNLPAEDVPQGA 117 Query: 259 DQVRHWYKYRWTSPLHFIDTPDKACTFDYARDCHD------PSGAKDMCVAGAVANFTSQ 420 D+ + +RW +P P + +D D SGA+ + ++GAVA Sbjct: 118 DEADNVELHRWGTPREMDFAPKEHFDLASVQDGMDFETAAKLSGARFVLLSGAVARIHRA 177 Query: 421 LMHYKQGSADRKYNLTEA---LLFLSHFM 498 L + + + LTE +L LS M Sbjct: 178 LAQFMLDTHSEQNGLTEVNGPVLVLSEMM 206 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 58,938,777 Number of Sequences: 219361 Number of extensions: 1010893 Number of successful extensions: 4425 Number of sequences better than 10.0: 10 Number of HSP's better than 10.0 without gapping: 4232 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4419 length of database: 80,573,946 effective HSP length: 106 effective length of database: 57,321,680 effective search space used: 4986986160 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)
