| Clone Name | baal30o10 |
|---|---|
| Clone Library Name | barley_pub |
| No. | Definition | Score (bits) |
E Value |
1 | CTTB2_CALMO (Q2QLB3) Cortactin-binding protein 2 (CortBP2) | 33 | 0.87 | 2 | CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2) | 30 | 4.3 | 3 | BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTP... | 30 | 7.3 |
|---|
>CTTB2_CALMO (Q2QLB3) Cortactin-binding protein 2 (CortBP2)| Length = 1663 Score = 32.7 bits (73), Expect = 0.87 Identities = 16/27 (59%), Positives = 17/27 (62%), Gaps = 3/27 (11%) Frame = +2 Query: 83 TGAQ---PPMPWADPAGSVGTHPSLQR 154 TG Q PP P A P G VGTHPS+ R Sbjct: 500 TGPQAGAPPRPGAPPTGDVGTHPSVGR 526
>CTTB2_CALJA (Q2QLF8) Cortactin-binding protein 2 (CortBP2)| Length = 1662 Score = 30.4 bits (67), Expect = 4.3 Identities = 15/27 (55%), Positives = 16/27 (59%), Gaps = 3/27 (11%) Frame = +2 Query: 83 TGAQ---PPMPWADPAGSVGTHPSLQR 154 TG Q PP P A P G V THPS+ R Sbjct: 499 TGPQAGAPPRPGAPPTGDVSTHPSVGR 525
>BORG5_HUMAN (Q00587) Cdc42 effector protein 1 (Binder of Rho GTPases 5) (Serum| protein MSE55) Length = 391 Score = 29.6 bits (65), Expect = 7.3 Identities = 16/50 (32%), Positives = 20/50 (40%) Frame = +2 Query: 71 EAAMTGAQPPMPWADPAGSVGTHPSLQRP*RTEEA*PAMPWADPAGSAGS 220 E A PP P A+P G P+ A P+ P A P G A + Sbjct: 223 ETPAPAANPPAPTANPTGPAANPPATTANPPAPAANPSAPAATPTGPAAN 272 Database: uniprot_sprot.fasta Posted date: May 25, 2006 5:36 PM Number of letters in database: 80,573,946 Number of sequences in database: 219,361 Lambda K H 0.318 0.135 0.401 Gapped Lambda K H 0.267 0.0410 0.140 Matrix: BLOSUM62 Gap Penalties: Existence: 11, Extension: 1 Number of Hits to DB: 92,389,690 Number of Sequences: 219361 Number of extensions: 1970870 Number of successful extensions: 4739 Number of sequences better than 10.0: 3 Number of HSP's better than 10.0 without gapping: 4505 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 0 Number of HSP's gapped (non-prelim): 4732 length of database: 80,573,946 effective HSP length: 107 effective length of database: 57,102,319 effective search space used: 5538924943 frameshift window, decay const: 50, 0.1 T: 12 A: 40 X1: 16 ( 7.3 bits) X2: 38 (14.6 bits) X3: 64 (24.7 bits) S1: 41 (21.7 bits)