| Clone Name | baal31c23 |
|---|---|
| Clone Library Name | barley_pub |
>ref|NM_189906.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 564 Score = 303 bits (153), Expect = 3e-79 Identities = 243/273 (89%) Strand = Plus / Plus Query: 285 ggcggtggcggtgactgggcaggtcactgaggtctgcaaagacaccttctggccaattgt 344 ||||||||| ||||| |||||||| || ||||| ||| || ||||||||||||||||| Sbjct: 222 ggcggtggccgtgaccgggcaggtgacggaggtgaacaaggataccttctggccaattgt 281 Query: 345 caaggcagcagggccgaagcttgtcgtcctcgatatgtacacccaatggtgcggcccttg 404 |||| | |||||||| ||| | ||||||||||| |||||||||||||||||||||||||| Sbjct: 282 caagtcggcagggcccaaggtcgtcgtcctcgacatgtacacccaatggtgcggcccttg 341 Query: 405 caaagttatggcaccgaaattccagcagatgtccgagaaggaccacgacgtcgtgttcct 464 ||| || |||||||||||||||||| ||||||||||||||||||| ||||| |||||||| Sbjct: 342 caaggtgatggcaccgaaattccaggagatgtccgagaaggaccaggacgttgtgttcct 401 Query: 465 caagctcgattgcaatcaagacaacaggccacttgcaaaggagctcggcataagggttgt 524 ||| ||||| |||||||||||||||| | | |||||||||||||| ||||||| |||||| Sbjct: 402 caaactcgactgcaatcaagacaacaagtctcttgcaaaggagctgggcataaaggttgt 461 Query: 525 accaacattcaagattttcaaggatgggaaggt 557 ||||||||||||||| ||||||| |||||||| Sbjct: 462 gccaacattcaagattctcaaggacgggaaggt 494 Score = 81.8 bits (41), Expect = 2e-12 Identities = 74/84 (88%), Gaps = 1/84 (1%) Strand = Plus / Plus Query: 57 atggcgttacgcctctccgtctcctcgccgcagagcacggntctcctcgccggccatctc 116 |||||| ||||||||||||||||||| |||| | ||| | ||||||||||||||||| Sbjct: 1 atggcgctacgcctctccgtctcctcctcgcacgggccggct-tcctcgccggccatctc 59 Query: 117 ctcatgccgccccgccgcctgcgg 140 | |||||||||||||||||||||| Sbjct: 60 cacatgccgccccgccgcctgcgg 83 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 162 ggcttctcagaagaggagcctgatggtggtgtctggctctga 203 ||||||||||| ||||||||||| ||||||||||||| |||| Sbjct: 114 ggcttctcagaggaggagcctgacggtggtgtctggccctga 155
>dbj|AK101264.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033032K11, full insert sequence Length = 948 Score = 303 bits (153), Expect = 3e-79 Identities = 243/273 (89%) Strand = Plus / Plus Query: 285 ggcggtggcggtgactgggcaggtcactgaggtctgcaaagacaccttctggccaattgt 344 ||||||||| ||||| |||||||| || ||||| ||| || ||||||||||||||||| Sbjct: 312 ggcggtggccgtgaccgggcaggtgacggaggtgaacaaggataccttctggccaattgt 371 Query: 345 caaggcagcagggccgaagcttgtcgtcctcgatatgtacacccaatggtgcggcccttg 404 |||| | |||||||| ||| | ||||||||||| |||||||||||||||||||||||||| Sbjct: 372 caagtcggcagggcccaaggtcgtcgtcctcgacatgtacacccaatggtgcggcccttg 431 Query: 405 caaagttatggcaccgaaattccagcagatgtccgagaaggaccacgacgtcgtgttcct 464 ||| || |||||||||||||||||| ||||||||||||||||||| ||||| |||||||| Sbjct: 432 caaggtgatggcaccgaaattccaggagatgtccgagaaggaccaggacgttgtgttcct 491 Query: 465 caagctcgattgcaatcaagacaacaggccacttgcaaaggagctcggcataagggttgt 524 ||| ||||| |||||||||||||||| | | |||||||||||||| ||||||| |||||| Sbjct: 492 caaactcgactgcaatcaagacaacaagtctcttgcaaaggagctgggcataaaggttgt 551 Query: 525 accaacattcaagattttcaaggatgggaaggt 557 ||||||||||||||| ||||||| |||||||| Sbjct: 552 gccaacattcaagattctcaaggacgggaaggt 584 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 51 catccaatggcgttacgcctctccgtctcctcgccgcagagcacggntctcctcgccggc 110 |||||||||||| ||||||||||||||||||| |||| | ||| | ||||||||||| Sbjct: 85 catccaatggcgctacgcctctccgtctcctcctcgcacgggccggct-tcctcgccggc 143 Query: 111 catctcctcatgccgccccgccgcctgcgg 140 ||||||| |||||||||||||||||||||| Sbjct: 144 catctccacatgccgccccgccgcctgcgg 173 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 162 ggcttctcagaagaggagcctgatggtggtgtctggctctga 203 ||||||||||| ||||||||||| ||||||||||||| |||| Sbjct: 204 ggcttctcagaggaggagcctgacggtggtgtctggccctga 245
>gb|AF022741.1|AF022741 Oryza sativa thioredoxin F isoform mRNA, complete cds Length = 808 Score = 206 bits (104), Expect = 6e-50 Identities = 231/272 (84%), Gaps = 1/272 (0%) Strand = Plus / Plus Query: 285 ggcggtggcggtgactgggcaggtcactgaggtctgcaaag-acaccttctggccaattg 343 ||||||||| ||||| |||||||| || ||||| ||||| | |||||||||||||||| Sbjct: 324 ggcggtggccgtgaccgggcaggtgacggaggtgaacaaaggataccttctggccaattg 383 Query: 344 tcaaggcagcagggccgaagcttgtcgtcctcgatatgtacacccaatggtgcggccctt 403 ||||| | |||||||| ||| | ||| ||||| | ||||||||||||||||||||||||| Sbjct: 384 tcaagtcggcagggcccaaggtcgtcctcctcaacatgtacacccaatggtgcggccctt 443 Query: 404 gcaaagttatggcaccgaaattccagcagatgtccgagaaggaccacgacgtcgtgttcc 463 |||| || |||||||||||||||||| ||||||||||||||||||| ||||| |||||| Sbjct: 444 gcaaggtgatggcaccgaaattccaggagatgtccgagaaggaccaggacgttgtgttct 503 Query: 464 tcaagctcgattgcaatcaagacaacaggccacttgcaaaggagctcggcataagggttg 523 |||| || || ||||||||| | |||| |||||||||||| |||| || ||||| Sbjct: 504 tcaaactagactgcaatcaacaaaacaatttttttgcaaaggagccgggcacaaaggttg 563 Query: 524 taccaacattcaagattttcaaggatgggaag 555 | ||||||||||||||||| ||||| |||||| Sbjct: 564 tcccaacattcaagatttttaaggacgggaag 595 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 51 catccaatggcgttacgcctctccgtctcctcgccgcagagcacggntctcctcgccggc 110 |||||||||||| ||||||||||||||||||| |||| | ||| |||||||||||| Sbjct: 97 catccaatggcgctacgcctctccgtctcctcctcgcacgggccggc-ctcctcgccggc 155 Query: 111 catctcctcatgccgccccgccgcctgcgg 140 ||||||| |||||||||||||||||||||| Sbjct: 156 catctccacatgccgccccgccgcctgcgg 185 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 162 ggcttctcagaagaggagcctgatggtggtgtctggctctga 203 ||||||||| ||||||||||||| ||||||||||||| |||| Sbjct: 216 ggcttctcaaaagaggagcctgacggtggtgtctggccctga 257
>gb|AY103871.1| Zea mays PCO072881 mRNA sequence Length = 983 Score = 168 bits (85), Expect = 1e-38 Identities = 214/257 (83%) Strand = Plus / Plus Query: 301 gggcaggtcactgaggtctgcaaagacaccttctggccaattgtcaaggcagcagggccg 360 ||||||||||| |||||| ||| |||||||||||||| || ||| |||| || || Sbjct: 245 gggcaggtcacggaggtcaacaaggacaccttctggcccatcgtcgaggccgccggcgac 304 Query: 361 aagcttgtcgtcctcgatatgtacacccaatggtgcggcccttgcaaagttatggcaccg 420 ||| | ||||||||||| ||||||||| |||||||||| ||||||||||| ||||| || Sbjct: 305 aaggtcgtcgtcctcgacatgtacaccgaatggtgcgggccttgcaaagtgatggctccc 364 Query: 421 aaattccagcagatgtccgagaaggaccacgacgtcgtgttcctcaagctcgattgcaat 480 || |||||| |||||||||||||| ||| |||||||||||||||||||| || ||||| Sbjct: 365 aagttccaggagatgtccgagaagaacctggacgtcgtgttcctcaagctggactgcaac 424 Query: 481 caagacaacaggccacttgcaaaggagctcggcataagggttgtaccaacattcaagatt 540 || ||||||| ||| || || |||||||| ||||||| |||||| || || |||||||| Sbjct: 425 caggacaacaagcctctcgcgaaggagctgggcataaaggttgtgccgacgttcaagatc 484 Query: 541 ttcaaggatgggaaggt 557 |||||| |||||||| Sbjct: 485 ctcaagggcgggaaggt 501
>dbj|AP008207.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, complete sequence Length = 43261740 Score = 141 bits (71), Expect = 3e-30 Identities = 92/99 (92%) Strand = Plus / Plus Query: 392 ggtgcggcccttgcaaagttatggcaccgaaattccagcagatgtccgagaaggaccacg 451 |||||||||||||||| || |||||||||||||||||| ||||||||||||||||||| | Sbjct: 39788418 ggtgcggcccttgcaaggtgatggcaccgaaattccaggagatgtccgagaaggaccagg 39788477 Query: 452 acgtcgtgttcctcaagctcgattgcaatcaagacaaca 490 |||| ||||||||||| ||||| |||||||||||||||| Sbjct: 39788478 acgttgtgttcctcaaactcgactgcaatcaagacaaca 39788516 Score = 99.6 bits (50), Expect = 9e-18 Identities = 95/110 (86%) Strand = Plus / Plus Query: 285 ggcggtggcggtgactgggcaggtcactgaggtctgcaaagacaccttctggccaattgt 344 ||||||||| ||||| |||||||| || ||||| ||| || ||||||||||||||||| Sbjct: 39788116 ggcggtggccgtgaccgggcaggtgacggaggtgaacaaggataccttctggccaattgt 39788175 Query: 345 caaggcagcagggccgaagcttgtcgtcctcgatatgtacacccaatggt 394 |||| | |||||||| ||| | ||||||||||| |||||||||||||||| Sbjct: 39788176 caagtcggcagggcccaaggtcgtcgtcctcgacatgtacacccaatggt 39788225 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 51 catccaatggcgttacgcctctccgtctcctcgccgcagagcacggntctcctcgccggc 110 |||||||||||| ||||||||||||||||||| |||| | ||| | ||||||||||| Sbjct: 39787889 catccaatggcgctacgcctctccgtctcctcctcgcacgggccggct-tcctcgccggc 39787947 Query: 111 catctcctcatgccgccccgccgcctgcgg 140 ||||||| |||||||||||||||||||||| Sbjct: 39787948 catctccacatgccgccccgccgcctgcgg 39787977 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 496 cttgcaaaggagctcggcataagggttgtaccaacattcaagattttcaaggatgggaag 555 |||||||||||||| ||||||| |||||| ||||||||||||||| ||||||| |||||| Sbjct: 39788643 cttgcaaaggagctgggcataaaggttgtgccaacattcaagattctcaaggacgggaag 39788702 Query: 556 gt 557 || Sbjct: 39788703 gt 39788704 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 162 ggcttctcagaagaggagcctgatggtggtgtctggctctga 203 ||||||||||| ||||||||||| ||||||||||||| |||| Sbjct: 39788008 ggcttctcagaggaggagcctgacggtggtgtctggccctga 39788049
>dbj|AP003436.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 1, PAC clone:P0470A12 Length = 185095 Score = 141 bits (71), Expect = 3e-30 Identities = 92/99 (92%) Strand = Plus / Plus Query: 392 ggtgcggcccttgcaaagttatggcaccgaaattccagcagatgtccgagaaggaccacg 451 |||||||||||||||| || |||||||||||||||||| ||||||||||||||||||| | Sbjct: 139317 ggtgcggcccttgcaaggtgatggcaccgaaattccaggagatgtccgagaaggaccagg 139376 Query: 452 acgtcgtgttcctcaagctcgattgcaatcaagacaaca 490 |||| ||||||||||| ||||| |||||||||||||||| Sbjct: 139377 acgttgtgttcctcaaactcgactgcaatcaagacaaca 139415 Score = 99.6 bits (50), Expect = 9e-18 Identities = 95/110 (86%) Strand = Plus / Plus Query: 285 ggcggtggcggtgactgggcaggtcactgaggtctgcaaagacaccttctggccaattgt 344 ||||||||| ||||| |||||||| || ||||| ||| || ||||||||||||||||| Sbjct: 139015 ggcggtggccgtgaccgggcaggtgacggaggtgaacaaggataccttctggccaattgt 139074 Query: 345 caaggcagcagggccgaagcttgtcgtcctcgatatgtacacccaatggt 394 |||| | |||||||| ||| | ||||||||||| |||||||||||||||| Sbjct: 139075 caagtcggcagggcccaaggtcgtcgtcctcgacatgtacacccaatggt 139124 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Plus Query: 51 catccaatggcgttacgcctctccgtctcctcgccgcagagcacggntctcctcgccggc 110 |||||||||||| ||||||||||||||||||| |||| | ||| | ||||||||||| Sbjct: 138788 catccaatggcgctacgcctctccgtctcctcctcgcacgggccggct-tcctcgccggc 138846 Query: 111 catctcctcatgccgccccgccgcctgcgg 140 ||||||| |||||||||||||||||||||| Sbjct: 138847 catctccacatgccgccccgccgcctgcgg 138876 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Plus Query: 496 cttgcaaaggagctcggcataagggttgtaccaacattcaagattttcaaggatgggaag 555 |||||||||||||| ||||||| |||||| ||||||||||||||| ||||||| |||||| Sbjct: 139542 cttgcaaaggagctgggcataaaggttgtgccaacattcaagattctcaaggacgggaag 139601 Query: 556 gt 557 || Sbjct: 139602 gt 139603 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Plus Query: 162 ggcttctcagaagaggagcctgatggtggtgtctggctctga 203 ||||||||||| ||||||||||| ||||||||||||| |||| Sbjct: 138907 ggcttctcagaggaggagcctgacggtggtgtctggccctga 138948
>dbj|AK119446.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-133-D02, full insert sequence Length = 4040 Score = 133 bits (67), Expect = 7e-28 Identities = 91/99 (91%) Strand = Plus / Minus Query: 392 ggtgcggcccttgcaaagttatggcaccgaaattccagcagatgtccgagaaggaccacg 451 |||||| ||||||||| || |||||||||||||||||| ||||||||||||||||||| | Sbjct: 3107 ggtgcgacccttgcaaggtgatggcaccgaaattccaggagatgtccgagaaggaccagg 3048 Query: 452 acgtcgtgttcctcaagctcgattgcaatcaagacaaca 490 |||| ||||||||||| ||||| |||||||||||||||| Sbjct: 3047 acgttgtgttcctcaaactcgactgcaatcaagacaaca 3009 Score = 99.6 bits (50), Expect = 9e-18 Identities = 95/110 (86%) Strand = Plus / Minus Query: 285 ggcggtggcggtgactgggcaggtcactgaggtctgcaaagacaccttctggccaattgt 344 ||||||||| ||||| |||||||| || ||||| ||| || ||||||||||||||||| Sbjct: 3409 ggcggtggccgtgaccgggcaggtgacggaggtgaacaaggataccttctggccaattgt 3350 Query: 345 caaggcagcagggccgaagcttgtcgtcctcgatatgtacacccaatggt 394 |||| | |||||||| ||| | ||||||||||| |||||||||||||||| Sbjct: 3349 caagtcggcagggcccaaggtcgtcgtcctcgacatgtacacccaatggt 3300 Score = 93.7 bits (47), Expect = 6e-16 Identities = 80/90 (88%), Gaps = 1/90 (1%) Strand = Plus / Minus Query: 51 catccaatggcgttacgcctctccgtctcctcgccgcagagcacggntctcctcgccggc 110 |||||||||||| ||||||||||||||||||| |||| | ||| | ||||||||||| Sbjct: 3636 catccaatggcgctacgcctctccgtctcctcctcgcacgggccggct-tcctcgccggc 3578 Query: 111 catctcctcatgccgccccgccgcctgcgg 140 ||||||| |||||||||||||||||||||| Sbjct: 3577 catctccacatgccgccccgccgcctgcgg 3548 Score = 83.8 bits (42), Expect = 6e-13 Identities = 57/62 (91%) Strand = Plus / Minus Query: 496 cttgcaaaggagctcggcataagggttgtaccaacattcaagattttcaaggatgggaag 555 |||||||||||||| ||||||| |||||| ||||||||||||||| ||||||| |||||| Sbjct: 2882 cttgcaaaggagctgggcataaaggttgtgccaacattcaagattctcaaggacgggaag 2823 Query: 556 gt 557 || Sbjct: 2822 gt 2821 Score = 60.0 bits (30), Expect = 8e-06 Identities = 39/42 (92%) Strand = Plus / Minus Query: 162 ggcttctcagaagaggagcctgatggtggtgtctggctctga 203 ||||||||||| ||||||||||| ||||||||||||| |||| Sbjct: 3517 ggcttctcagaggaggagcctgacggtggtgtctggccctga 3476
>gb|AY389723.1| Hyacinthus orientalis thioredoxin mRNA, partial cds Length = 712 Score = 65.9 bits (33), Expect = 1e-07 Identities = 39/41 (95%) Strand = Plus / Plus Query: 367 gtcgtcctcgatatgtacacccaatggtgcggcccttgcaa 407 ||||||||||||||||||||||| ||||| ||||||||||| Sbjct: 346 gtcgtcctcgatatgtacacccagtggtgtggcccttgcaa 386
>ref|NM_111141.2| Arabidopsis thaliana electron transporter/ thiol-disulfide exchange intermediate AT3G02730 mRNA, complete cds Length = 793 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 439 gagaaggaccacgacgtcgtgttcctcaagctcgattgcaatcaagacaacaggccactt 498 |||||| || ||||||| ||||| || ||||| || ||||||| ||| ||| ||||| | Sbjct: 434 gagaagtacgacgacgttgtgtttctaaagcttgactgcaatccagataaccggccattg 493 Query: 499 gcaaaggagctcggcataagggttgtaccaacattcaagattttcaaggat 549 ||||| ||||| || ||||| || || ||||| ||||||||||| |||||| Sbjct: 494 gcaaaagagctaggaataagagtggttccaactttcaagattttgaaggat 544
>gb|AY096721.1| Arabidopsis thaliana putative thioredoxin f1 protein (At3g02730) mRNA, complete cds Length = 568 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 439 gagaaggaccacgacgtcgtgttcctcaagctcgattgcaatcaagacaacaggccactt 498 |||||| || ||||||| ||||| || ||||| || ||||||| ||| ||| ||||| | Sbjct: 340 gagaagtacgacgacgttgtgtttctaaagcttgactgcaatccagataaccggccattg 399 Query: 499 gcaaaggagctcggcataagggttgtaccaacattcaagattttcaaggat 549 ||||| ||||| || ||||| || || ||||| ||||||||||| |||||| Sbjct: 400 gcaaaagagctaggaataagagtggttccaactttcaagattttgaaggat 450
>gb|AY065391.1| Arabidopsis thaliana putative thioredoxin f1 protein (At3g02730) mRNA, complete cds Length = 799 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 439 gagaaggaccacgacgtcgtgttcctcaagctcgattgcaatcaagacaacaggccactt 498 |||||| || ||||||| ||||| || ||||| || ||||||| ||| ||| ||||| | Sbjct: 424 gagaagtacgacgacgttgtgtttctaaagcttgactgcaatccagataaccggccattg 483 Query: 499 gcaaaggagctcggcataagggttgtaccaacattcaagattttcaaggat 549 ||||| ||||| || ||||| || || ||||| ||||||||||| |||||| Sbjct: 484 gcaaaagagctaggaataagagtggttccaactttcaagattttgaaggat 534
>gb|AY084778.1| Arabidopsis thaliana clone 11767 mRNA, complete sequence Length = 775 Score = 61.9 bits (31), Expect = 2e-06 Identities = 91/111 (81%) Strand = Plus / Plus Query: 439 gagaaggaccacgacgtcgtgttcctcaagctcgattgcaatcaagacaacaggccactt 498 |||||| || ||||||| ||||| || ||||| || ||||||| ||| ||| ||||| | Sbjct: 434 gagaagtacgacgacgttgtgtttctaaagcttgactgcaatccagataaccggccattg 493 Query: 499 gcaaaggagctcggcataagggttgtaccaacattcaagattttcaaggat 549 ||||| ||||| || ||||| || || ||||| ||||||||||| |||||| Sbjct: 494 gcaaaagagctaggaataagagtggttccaactttcaagattttgaaggat 544
>emb|X63537.1|PSTHIOF P.sativum mRNA for thioredoxin F isoform Length = 804 Score = 56.0 bits (28), Expect = 1e-04 Identities = 40/44 (90%) Strand = Plus / Plus Query: 367 gtcgtcctcgatatgtacacccaatggtgcggcccttgcaaagt 410 |||||||||||||||| |||| ||||||| || ||||||||||| Sbjct: 302 gtcgtcctcgatatgttcaccaaatggtgtggtccttgcaaagt 345
>emb|BX825421.1|CNS0A68L Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTSIL36ZB08 of Silique of strain col-0 of Arabidopsis thaliana (thale cress) Length = 751 Score = 54.0 bits (27), Expect = 5e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 439 gagaaggaccacgacgtcgtgttcctcaagctcgattgcaatcaagacaacaggccactt 498 |||||| || ||||||| ||||| || ||||| | ||||||| ||| ||| ||||| | Sbjct: 405 gagaagtacgacgacgttgtgtttctaaagctttactgcaatccagataaccggccattg 464 Query: 499 gcaaaggagctcggcataagggttgtaccaacattcaagattttcaaggat 549 ||||| ||||| || ||||| || || ||||| ||||||||||| |||||| Sbjct: 465 gcaaaagagctaggaataagagtggttccaactttcaagattttgaaggat 515
>gb|AF144385.1|AF144385 Arabidopsis thaliana thioredoxin f1 mRNA, complete cds Length = 789 Score = 54.0 bits (27), Expect = 5e-04 Identities = 90/111 (81%) Strand = Plus / Plus Query: 439 gagaaggaccacgacgtcgtgttcctcaagctcgattgcaatcaagacaacaggccactt 498 |||||| || ||||||| ||||| || ||||| || ||||||| ||| ||| ||||| | Sbjct: 421 gagaagtacgacgacgttgtgtttctaaagcttgactgcaatccagataaccggccattg 480 Query: 499 gcaaaggagctcggcataagggttgtaccaacattcaagattttcaaggat 549 |||| ||||| || ||||| || || ||||| ||||||||||| |||||| Sbjct: 481 ccaaaagagctaggaataagagtggttccaactttcaagattttgaaggat 531
>gb|DQ225181.1| Lycopersicon chilense thioredoxin F-like mRNA, complete sequence Length = 549 Score = 50.1 bits (25), Expect = 0.008 Identities = 46/53 (86%) Strand = Plus / Plus Query: 488 acaggccacttgcaaaggagctcggcataagggttgtaccaacattcaagatt 540 |||||||||| || ||||| || ||||||| ||| || ||||||||||||||| Sbjct: 410 acaggccactagcgaaggaactaggcataaaggtggttccaacattcaagatt 462
>ref|NM_121645.2| Arabidopsis thaliana electron transporter/ thiol-disulfide exchange intermediate AT5G16400 mRNA, complete cds Length = 869 Score = 46.1 bits (23), Expect = 0.12 Identities = 104/131 (79%) Strand = Plus / Plus Query: 365 ttgtcgtcctcgatatgtacacccaatggtgcggcccttgcaaagttatggcaccgaaat 424 |||| |||||||| |||||||| || ||||| || ||||||||||| || || || |||| Sbjct: 363 ttgttgtcctcgacatgtacactcagtggtgtggtccttgcaaagtgattgctcccaaat 422 Query: 425 tccagcagatgtccgagaaggaccacgacgtcgtgttcctcaagctcgattgcaatcaag 484 | | || | || |||||| |||| ||| | ||||| || ||||| ||||| || |||| Sbjct: 423 acaaagagctatcggagaagtaccaggacatggtgtttcttaagcttgattgtaaccaag 482 Query: 485 acaacaggcca 495 |||||| |||| Sbjct: 483 acaacaagcca 493
>gb|AY059086.1| Arabidopsis thaliana putative thioredoxin f2 protein (At5g16400) mRNA, complete cds Length = 589 Score = 46.1 bits (23), Expect = 0.12 Identities = 104/131 (79%) Strand = Plus / Plus Query: 365 ttgtcgtcctcgatatgtacacccaatggtgcggcccttgcaaagttatggcaccgaaat 424 |||| |||||||| |||||||| || ||||| || ||||||||||| || || || |||| Sbjct: 296 ttgttgtcctcgacatgtacactcagtggtgtggtccttgcaaagtgattgctcccaaat 355 Query: 425 tccagcagatgtccgagaaggaccacgacgtcgtgttcctcaagctcgattgcaatcaag 484 | | || | || |||||| |||| ||| | ||||| || ||||| ||||| || |||| Sbjct: 356 acaaagagctatcggagaagtaccaggacatggtgtttcttaagcttgattgtaaccaag 415 Query: 485 acaacaggcca 495 |||||| |||| Sbjct: 416 acaacaagcca 426
>gb|AF370356.1| Arabidopsis thaliana putative thioredoxin f2 protein (At5g16400) mRNA, complete cds Length = 808 Score = 46.1 bits (23), Expect = 0.12 Identities = 104/131 (79%) Strand = Plus / Plus Query: 365 ttgtcgtcctcgatatgtacacccaatggtgcggcccttgcaaagttatggcaccgaaat 424 |||| |||||||| |||||||| || ||||| || ||||||||||| || || || |||| Sbjct: 364 ttgttgtcctcgacatgtacactcagtggtgtggtccttgcaaagtgattgctcccaaat 423 Query: 425 tccagcagatgtccgagaaggaccacgacgtcgtgttcctcaagctcgattgcaatcaag 484 | | || | || |||||| |||| ||| | ||||| || ||||| ||||| || |||| Sbjct: 424 acaaagagctatcggagaagtaccaggacatggtgtttcttaagcttgattgtaaccaag 483 Query: 485 acaacaggcca 495 |||||| |||| Sbjct: 484 acaacaagcca 494
>gb|AF144386.1|AF144386 Arabidopsis thaliana thioredoxin f2 mRNA, complete cds Length = 848 Score = 46.1 bits (23), Expect = 0.12 Identities = 104/131 (79%) Strand = Plus / Plus Query: 365 ttgtcgtcctcgatatgtacacccaatggtgcggcccttgcaaagttatggcaccgaaat 424 |||| |||||||| |||||||| || ||||| || ||||||||||| || || || |||| Sbjct: 391 ttgttgtcctcgacatgtacactcagtggtgtggtccttgcaaagtgattgctcccaaat 450 Query: 425 tccagcagatgtccgagaaggaccacgacgtcgtgttcctcaagctcgattgcaatcaag 484 | | || | || |||||| |||| ||| | ||||| || ||||| ||||| || |||| Sbjct: 451 acaaagagctatcggagaagtaccaggacatggtgtttcttaagcttgattgtaaccaag 510 Query: 485 acaacaggcca 495 |||||| |||| Sbjct: 511 acaacaagcca 521
>ref|XM_418627.1| PREDICTED: Gallus gallus similar to Ras suppressor protein 1 (Rsu-1) (RSP-1) (LOC420524), mRNA Length = 1742 Score = 44.1 bits (22), Expect = 0.48 Identities = 22/22 (100%) Strand = Plus / Minus Query: 283 gcggcggtggcggtgactgggc 304 |||||||||||||||||||||| Sbjct: 510 gcggcggtggcggtgactgggc 489
>ref|XM_479375.1| Oryza sativa (japonica cultivar-group), mRNA Length = 618 Score = 42.1 bits (21), Expect = 1.9 Identities = 30/33 (90%) Strand = Plus / Minus Query: 102 ctcgccggccatctcctcatgccgccccgccgc 134 |||||||||| ||||||| ||||||||||||| Sbjct: 89 ctcgccggccgtctcctcccgccgccccgccgc 57
>gb|AC113107.15| Mus musculus chromosome 10, clone RP23-325G13, complete sequence Length = 207239 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 164 cttctcagaagaggagcctga 184 ||||||||||||||||||||| Sbjct: 97010 cttctcagaagaggagcctga 97030
>emb|BX957223.1| Methanococcus maripaludis S2 complete genome; segment 5/5 Length = 268122 Score = 42.1 bits (21), Expect = 1.9 Identities = 21/21 (100%) Strand = Plus / Plus Query: 417 accgaaattccagcagatgtc 437 ||||||||||||||||||||| Sbjct: 163954 accgaaattccagcagatgtc 163974
>gb|AY016023.1| Sphoeroides nephelus alpha globin gene cluster, complete sequence Length = 167215 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 182 tgatggtggtgtctggctct 201 |||||||||||||||||||| Sbjct: 21205 tgatggtggtgtctggctct 21224
>gb|AY225511.1| Streptomyces lividans strain 1326 plasmid SLP2, complete sequence Length = 50410 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 122 gccgccccgccgcctgcggc 141 |||||||||||||||||||| Sbjct: 3768 gccgccccgccgcctgcggc 3749
>gb|CP000070.1| Trypanosoma brucei chromosome 7, complete sequence Length = 2205233 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ccgcagcggcggtggcggtg 297 |||||||||||||||||||| Sbjct: 1747242 ccgcagcggcggtggcggtg 1747223
>gb|CP000143.1| Rhodobacter sphaeroides 2.4.1 chromosome 1, complete genome Length = 3188609 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 122 gccgccccgccgcctgcggc 141 |||||||||||||||||||| Sbjct: 3181215 gccgccccgccgcctgcggc 3181234
>gb|CP000094.1| Pseudomonas fluorescens PfO-1, complete genome Length = 6438405 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 389 aatggtgcggcccttgcaaa 408 |||||||||||||||||||| Sbjct: 6124941 aatggtgcggcccttgcaaa 6124922
>gb|AC091527.21| Trypanosoma brucei chromosome 7 clone RPCI93-33N13, complete sequence Length = 114057 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 278 ccgcagcggcggtggcggtg 297 |||||||||||||||||||| Sbjct: 68299 ccgcagcggcggtggcggtg 68280
>ref|XM_747944.1| Aspergillus fumigatus Af293 beta galactosidase (Afu1g16700) partial mRNA Length = 3048 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Plus Query: 496 cttgcaaaggagctcggcat 515 |||||||||||||||||||| Sbjct: 352 cttgcaaaggagctcggcat 371
>gb|CP000232.1| Moorella thermoacetica ATCC 39073, complete genome Length = 2628784 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 456 cgtgttcctcaagctcgatt 475 |||||||||||||||||||| Sbjct: 340174 cgtgttcctcaagctcgatt 340155
>dbj|AP008214.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, complete sequence Length = 28434780 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tacgcctctccgtctcctcg 83 |||||||||||||||||||| Sbjct: 14942073 tacgcctctccgtctcctcg 14942054
>dbj|AP005866.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 8, BAC clone:OSJNBb0076O03 Length = 140823 Score = 40.1 bits (20), Expect = 7.6 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 tacgcctctccgtctcctcg 83 |||||||||||||||||||| Sbjct: 74602 tacgcctctccgtctcctcg 74583
>gb|U35830.1|PSU35830 Pisum sativum thioredoxin f gene, complete cds Length = 1047 Score = 40.1 bits (20), Expect = 7.6 Identities = 26/28 (92%) Strand = Plus / Plus Query: 367 gtcgtcctcgatatgtacacccaatggt 394 |||||||||||||||| |||| |||||| Sbjct: 289 gtcgtcctcgatatgttcaccaaatggt 316 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 3,868,109 Number of Sequences: 3902068 Number of extensions: 3868109 Number of successful extensions: 86145 Number of sequences better than 10.0: 35 Number of HSP's better than 10.0 without gapping: 35 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 85867 Number of HSP's gapped (non-prelim): 278 length of query: 558 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 535 effective length of database: 17,143,297,704 effective search space: 9171664271640 effective search space used: 9171664271640 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)