| Clone Name | baal30n23 |
|---|---|
| Clone Library Name | barley_pub |
>dbj|AK105611.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-B05, full insert sequence Length = 1800 Score = 557 bits (281), Expect = e-155 Identities = 488/557 (87%) Strand = Plus / Plus Query: 15 ggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgccagaagag 74 ||||||||||||||||| ||||||||||| || |||||||| || |||||||| || ||| Sbjct: 837 ggattcagggaggctgtgaaggggttggatgtcaggaaggttctcgacgcgccggaggag 896 Query: 75 gtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgcttggtgag 134 ||||||||||| || |||||||||||||||||||| ||||| ||||||||||||| ||| Sbjct: 897 gtcaagtgtgttcccatgaagaatgtgcttgagcccggtgagatccccacgcttgccgag 956 Query: 135 cttggactctctgcaccaccggccatggcacaggactcaaaatctgccgctggttcaaat 194 || || ||| | || ||||||||||||||||| | ||||||| |||| | |||||| | | Sbjct: 957 ctcggcctcaccgcgccaccggccatggcacatggctcaaaagctgctgttggttctact 1016 Query: 195 cttattggtggtgaagcagaagccctggaaaggctgaagaaatttgctgcagaatgttgt 254 || |||||||||||||| ||||| ||||| ||| ||||||| |||||| ||||||||||| Sbjct: 1017 ctcattggtggtgaagctgaagctctggagaggttgaagaagtttgcttcagaatgttgt 1076 Query: 255 atgcagccgaacaaagctgtcaaagatagtacccagaatagcatatatggtgctaatttc 314 |||||||| ||||||| | ||| || || || | ||||||||||||||||||||||| Sbjct: 1077 atgcagccaaacaaaggggacaaggacagcactcgagatagcatatatggtgctaatttc 1136 Query: 315 tcctgcaaaatttctccatggcttgctactggttgtctctctccacgtttcatgtatgag 374 |||||||||||||| |||||||||||||| ||||| ||||| || || |||||||||||| Sbjct: 1137 tcctgcaaaatttcaccatggcttgctacaggttgcctctcaccgcgcttcatgtatgag 1196 Query: 375 gagttgaagaagcatgccattagagcaattccatcagggtcaacacccaaggacggtgac 434 ||||||||||||||||| |||||||||||||| || |||||||||||| | ||||| Sbjct: 1197 gagttgaagaagcatgcttcaagagcaattccatcgggatcaacacccaagaatggtgat 1256 Query: 435 ggaacatcagatgctgggacaaattggttaatgtttgaattgctatggagagatttcttc 494 || ||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||| Sbjct: 1257 ggcacatctgatgctggtacaaattggttaatgttcgaattgctatggagagatttcttc 1316 Query: 495 aggttcgtcacaaagaagtacagctctgcacagaagacatccgaagttgcaccggccact 554 |||||| |||||||||||||||| |||||||||||||| || |||||||| || |||||| Sbjct: 1317 aggttcatcacaaagaagtacagttctgcacagaagacctctgaagttgctcctgccact 1376 Query: 555 ggttgcacacctacccc 571 |||||||| |||||||| Sbjct: 1377 ggttgcacccctacccc 1393
>gb|AY107492.1| Zea mays PCO060628 mRNA sequence Length = 1028 Score = 525 bits (265), Expect = e-146 Identities = 469/537 (87%) Strand = Plus / Plus Query: 8 ctatggcggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgcc 67 ||||||||| ||||||||||| || |||||||||||||| || ||||||||||| || || Sbjct: 138 ctatggcggcttcagggaggccgtgaaggggttggaggtcagaaaggtgctggaggctcc 197 Query: 68 agaagaggtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgct 127 || ||||||||||| ||||| |||||||||||||| ||||| ||||||||||||||||| Sbjct: 198 cgaggaggtcaagtgcgtgcccatgaagaatgtgctcgagcccggtgacatccccacgct 257 Query: 128 tggtgagcttggactctctgcaccaccggccatggcacaggactcaaaatctgccgctgg 187 || |||||| || ||| |||| ||||| |||||| |||||||||||||| |||| | ||| Sbjct: 258 tgctgagctcgggctcactgcgccaccagccatgtcacaggactcaaaacctgctgttgg 317 Query: 188 ttcaaatcttattggtggtgaagcagaagccctggaaaggctgaagaaatttgctgcaga 247 || | ||| ||||||||||| ||||||| ||||| ||| ||||||| ||||||||||| Sbjct: 318 ctctactctcattggtggtgagacagaagctctggagaggttgaagaagtttgctgcaga 377 Query: 248 atgttgtatgcagccgaacaaagctgtcaaagatagtacccagaatagcatatatggtgc 307 ||| | ||||||||| ||||||| | |||| | |||||| |||||||||||||||| Sbjct: 378 atgctctatgcagccaaacaaagtagacaaaagcaatacccaagatagcatatatggtgc 437 Query: 308 taatttctcctgcaaaatttctccatggcttgctactggttgtctctctccacgtttcat 367 ||||||||| |||||||||||||||||||||||||| ||||| ||||||||||| ||||| Sbjct: 438 taatttctcttgcaaaatttctccatggcttgctacaggttgcctctctccacggttcat 497 Query: 368 gtatgaggagttgaagaagcatgccattagagcaattccatcagggtcaacacccaagga 427 |||||||||||||||||||||||| | || ||||||||| | ||||||||||||||| | Sbjct: 498 gtatgaggagttgaagaagcatgctactaaagcaattccttttgggtcaacacccaagaa 557 Query: 428 cggtgacggaacatcagatgctgggacaaattggttaatgtttgaattgctatggagaga 487 ||| || ||||| |||||||| |||||||||||||||||||| ||||| |||||||| Sbjct: 558 taatgatggcacatctgatgctggaacaaattggttaatgtttgagttgctgtggagaga 617 Query: 488 tttcttcaggttcgtcacaaagaagtacagctctgcacagaagacatccgaagttgc 544 ||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 618 tttcttcaggttcatcacaaagaagtacagctctgtacagaagacatctgaagttgc 674
>gb|BT018292.1| Zea mays clone EL01T0205D06.c mRNA sequence Length = 996 Score = 494 bits (249), Expect = e-136 Identities = 465/537 (86%) Strand = Plus / Plus Query: 8 ctatggcggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgcc 67 ||||||||| ||||||||||| || ||| || |||| || || ||||||||||| ||||| Sbjct: 139 ctatggcggcttcagggaggccgtgaagaggctggacgtcagaaaggtgctggaggcgcc 198 Query: 68 agaagaggtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgct 127 || ||||||||||| ||||| |||||||||||||| ||||| || |||||||||||||| Sbjct: 199 cgaggaggtcaagtgcgtgcccatgaagaatgtgctcgagcccggcgacatccccacgct 258 Query: 128 tggtgagcttggactctctgcaccaccggccatggcacaggactcaaaatctgccgctgg 187 || |||||| || ||| |||| ||||| |||||||||||||| || ||| |||| | ||| Sbjct: 259 tgctgagctcggtctcactgcgccaccagccatggcacaggattcgaaacctgctgttgg 318 Query: 188 ttcaaatcttattggtggtgaagcagaagccctggaaaggctgaagaaatttgctgcaga 247 || | ||| ||||||||||| ||| ||| ||||| ||| ||||||| ||||||||||| Sbjct: 319 ctctactctcattggtggtgagacaggagctctggagaggttgaagaagtttgctgcaga 378 Query: 248 atgttgtatgcagccgaacaaagctgtcaaagatagtacccagaatagcatatatggtgc 307 ||| | ||||||||| |||||||| | ||| | |||||| |||||||||||||||| Sbjct: 379 atgctctatgcagccaaacaaagcagataaaagcaatacccaagatagcatatatggtgc 438 Query: 308 taatttctcctgcaaaatttctccatggcttgctactggttgtctctctccacgtttcat 367 | |||||||||||||||||||||||||||| ||||| ||||| || |||||| | ||||| Sbjct: 439 tgatttctcctgcaaaatttctccatggctcgctacaggttgcctttctccaaggttcat 498 Query: 368 gtatgaggagttgaagaagcatgccattagagcaattccatcagggtcaacacccaagga 427 |||||||||||||||||||||||| | |||||||||||| || ||||||||||||||| | Sbjct: 499 gtatgaggagttgaagaagcatgctactagagcaattccttctgggtcaacacccaagaa 558 Query: 428 cggtgacggaacatcagatgctgggacaaattggttaatgtttgaattgctatggagaga 487 ||| || ||||| ||||||||||||||||||||||||||||| |||||||||||||| Sbjct: 559 taatgatggcacatctgatgctgggacaaattggttaatgtttgagttgctatggagaga 618 Query: 488 tttcttcaggttcgtcacaaagaagtacagctctgcacagaagacatccgaagttgc 544 ||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||| Sbjct: 619 tttcttcaggttcatcacaaagaagtacagctctgtacagaagacatctgaagttgc 675
>emb|AJ303112.1|HVU303112 Hordeum vulgare partial mRNA for lectin, clone 4B 9T7 Length = 189 Score = 212 bits (107), Expect = 1e-51 Identities = 107/107 (100%) Strand = Plus / Plus Query: 7 gctatggcggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgc 66 |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 68 gctatggcggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgc 127 Query: 67 cagaagaggtcaagtgtgtgcctatgaagaatgtgcttgagcctggt 113 ||||||||||||||||||||||||||||||||||||||||||||||| Sbjct: 128 cagaagaggtcaagtgtgtgcctatgaagaatgtgcttgagcctggt 174
>gb|DP000009.1| Oryza sativa (japonica cultivar-group) chromosome 3 Length = 36102668 Score = 210 bits (106), Expect = 4e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 170 ctcaaaatctgccgctggttcaaatcttattggtggtgaagcagaagccctggaaaggct 229 ||||||| |||| | |||||| | ||| |||||||||||||| ||||| ||||| ||| | Sbjct: 12771240 ctcaaaagctgctgttggttctactctcattggtggtgaagctgaagctctggagaggtt 12771299 Query: 230 gaagaaatttgctgcagaatgttgtatgcagccgaacaaagctgtcaaagatagtaccca 289 |||||| |||||| ||||||||||||||||||| ||||||| | ||| || || || | Sbjct: 12771300 gaagaagtttgcttcagaatgttgtatgcagccaaacaaaggggacaaggacagcactcg 12771359 Query: 290 gaatagcatatatggtgctaatttctcctgcaaaatttctccatggcttgctactggttg 349 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 12771360 agatagcatatatggtgctaatttctcctgcaaaatttcaccatggcttgctacaggttg 12771419 Query: 350 tctctctccacgtttcatgtatgaggagttgaagaagcatgc 391 ||||| || || ||||||||||||||||||||||||||||| Sbjct: 12771420 cctctcaccgcgcttcatgtatgaggagttgaagaagcatgc 12771461 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Plus Query: 15 ggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgccagaagag 74 ||||||||||||||||| ||||||||||| || |||||||| || |||||||| || ||| Sbjct: 12769830 ggattcagggaggctgtgaaggggttggatgtcaggaaggttctcgacgcgccggaggag 12769889 Query: 75 gtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgcttggtgag 134 ||||||||||| || |||||||||||||||||||| ||||| ||||||||||||| ||| Sbjct: 12769890 gtcaagtgtgttcccatgaagaatgtgcttgagcccggtgagatccccacgcttgccgag 12769949 Query: 135 cttggactctctgcaccaccggccatggcaca 166 || || ||| | || ||||||||||||||||| Sbjct: 12769950 ctcggcctcaccgcgccaccggccatggcaca 12769981 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 396 agagcaattccatcagggtcaacacccaaggacggtgacggaacatcagatgctgggaca 455 |||||||||||||| || |||||||||||| | ||||| || ||||| |||||||| ||| Sbjct: 12771576 agagcaattccatcgggatcaacacccaagaatggtgatggcacatctgatgctggtaca 12771635 Query: 456 aattggttaatgtttgaattgctatggagagatttcttcaggt 498 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 12771636 aattggttaatgttcgaattgctatggagagatttcttcaggt 12771678 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 490 tcttcaggttcgtcacaaagaagtacagctctgcacagaagacatccgaagttgcaccgg 549 |||| |||||| |||||||||||||||| |||||||||||||| || |||||||| || | Sbjct: 12771917 tctttaggttcatcacaaagaagtacagttctgcacagaagacctctgaagttgctcctg 12771976 Query: 550 ccactggttgcacacctacccc 571 ||||||||||||| |||||||| Sbjct: 12771977 ccactggttgcacccctacccc 12771998
>gb|AC148339.1| Oryza sativa (japonica cultivar-group) chromosome 3 clone B1339A06, complete sequence Length = 132243 Score = 210 bits (106), Expect = 4e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 170 ctcaaaatctgccgctggttcaaatcttattggtggtgaagcagaagccctggaaaggct 229 ||||||| |||| | |||||| | ||| |||||||||||||| ||||| ||||| ||| | Sbjct: 9456 ctcaaaagctgctgttggttctactctcattggtggtgaagctgaagctctggagaggtt 9515 Query: 230 gaagaaatttgctgcagaatgttgtatgcagccgaacaaagctgtcaaagatagtaccca 289 |||||| |||||| ||||||||||||||||||| ||||||| | ||| || || || | Sbjct: 9516 gaagaagtttgcttcagaatgttgtatgcagccaaacaaaggggacaaggacagcactcg 9575 Query: 290 gaatagcatatatggtgctaatttctcctgcaaaatttctccatggcttgctactggttg 349 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 9576 agatagcatatatggtgctaatttctcctgcaaaatttcaccatggcttgctacaggttg 9635 Query: 350 tctctctccacgtttcatgtatgaggagttgaagaagcatgc 391 ||||| || || ||||||||||||||||||||||||||||| Sbjct: 9636 cctctcaccgcgcttcatgtatgaggagttgaagaagcatgc 9677 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Plus Query: 15 ggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgccagaagag 74 ||||||||||||||||| ||||||||||| || |||||||| || |||||||| || ||| Sbjct: 8046 ggattcagggaggctgtgaaggggttggatgtcaggaaggttctcgacgcgccggaggag 8105 Query: 75 gtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgcttggtgag 134 ||||||||||| || |||||||||||||||||||| ||||| ||||||||||||| ||| Sbjct: 8106 gtcaagtgtgttcccatgaagaatgtgcttgagcccggtgagatccccacgcttgccgag 8165 Query: 135 cttggactctctgcaccaccggccatggcaca 166 || || ||| | || ||||||||||||||||| Sbjct: 8166 ctcggcctcaccgcgccaccggccatggcaca 8197 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 396 agagcaattccatcagggtcaacacccaaggacggtgacggaacatcagatgctgggaca 455 |||||||||||||| || |||||||||||| | ||||| || ||||| |||||||| ||| Sbjct: 9792 agagcaattccatcgggatcaacacccaagaatggtgatggcacatctgatgctggtaca 9851 Query: 456 aattggttaatgtttgaattgctatggagagatttcttcaggt 498 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 9852 aattggttaatgttcgaattgctatggagagatttcttcaggt 9894 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 490 tcttcaggttcgtcacaaagaagtacagctctgcacagaagacatccgaagttgcaccgg 549 |||| |||||| |||||||||||||||| |||||||||||||| || |||||||| || | Sbjct: 10133 tctttaggttcatcacaaagaagtacagttctgcacagaagacctctgaagttgctcctg 10192 Query: 550 ccactggttgcacacctacccc 571 ||||||||||||| |||||||| Sbjct: 10193 ccactggttgcacccctacccc 10214
>dbj|AP008209.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 3, complete sequence Length = 36192742 Score = 210 bits (106), Expect = 4e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 170 ctcaaaatctgccgctggttcaaatcttattggtggtgaagcagaagccctggaaaggct 229 ||||||| |||| | |||||| | ||| |||||||||||||| ||||| ||||| ||| | Sbjct: 12768003 ctcaaaagctgctgttggttctactctcattggtggtgaagctgaagctctggagaggtt 12768062 Query: 230 gaagaaatttgctgcagaatgttgtatgcagccgaacaaagctgtcaaagatagtaccca 289 |||||| |||||| ||||||||||||||||||| ||||||| | ||| || || || | Sbjct: 12768063 gaagaagtttgcttcagaatgttgtatgcagccaaacaaaggggacaaggacagcactcg 12768122 Query: 290 gaatagcatatatggtgctaatttctcctgcaaaatttctccatggcttgctactggttg 349 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 12768123 agatagcatatatggtgctaatttctcctgcaaaatttcaccatggcttgctacaggttg 12768182 Query: 350 tctctctccacgtttcatgtatgaggagttgaagaagcatgc 391 ||||| || || ||||||||||||||||||||||||||||| Sbjct: 12768183 cctctcaccgcgcttcatgtatgaggagttgaagaagcatgc 12768224 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Plus Query: 15 ggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgccagaagag 74 ||||||||||||||||| ||||||||||| || |||||||| || |||||||| || ||| Sbjct: 12766593 ggattcagggaggctgtgaaggggttggatgtcaggaaggttctcgacgcgccggaggag 12766652 Query: 75 gtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgcttggtgag 134 ||||||||||| || |||||||||||||||||||| ||||| ||||||||||||| ||| Sbjct: 12766653 gtcaagtgtgttcccatgaagaatgtgcttgagcccggtgagatccccacgcttgccgag 12766712 Query: 135 cttggactctctgcaccaccggccatggcaca 166 || || ||| | || ||||||||||||||||| Sbjct: 12766713 ctcggcctcaccgcgccaccggccatggcaca 12766744 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 396 agagcaattccatcagggtcaacacccaaggacggtgacggaacatcagatgctgggaca 455 |||||||||||||| || |||||||||||| | ||||| || ||||| |||||||| ||| Sbjct: 12768339 agagcaattccatcgggatcaacacccaagaatggtgatggcacatctgatgctggtaca 12768398 Query: 456 aattggttaatgtttgaattgctatggagagatttcttcaggt 498 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 12768399 aattggttaatgttcgaattgctatggagagatttcttcaggt 12768441 Score = 99.6 bits (50), Expect = 1e-17 Identities = 74/82 (90%) Strand = Plus / Plus Query: 490 tcttcaggttcgtcacaaagaagtacagctctgcacagaagacatccgaagttgcaccgg 549 |||| |||||| |||||||||||||||| |||||||||||||| || |||||||| || | Sbjct: 12768680 tctttaggttcatcacaaagaagtacagttctgcacagaagacctctgaagttgctcctg 12768739 Query: 550 ccactggttgcacacctacccc 571 ||||||||||||| |||||||| Sbjct: 12768740 ccactggttgcacccctacccc 12768761
>gb|AC121491.2| Oryza sativa (japonica cultivar-group) chromosome 3 clone OSJNBb0050D18, complete sequence Length = 126350 Score = 210 bits (106), Expect = 4e-51 Identities = 193/222 (86%) Strand = Plus / Plus Query: 170 ctcaaaatctgccgctggttcaaatcttattggtggtgaagcagaagccctggaaaggct 229 ||||||| |||| | |||||| | ||| |||||||||||||| ||||| ||||| ||| | Sbjct: 125693 ctcaaaagctgctgttggttctactctcattggtggtgaagctgaagctctggagaggtt 125752 Query: 230 gaagaaatttgctgcagaatgttgtatgcagccgaacaaagctgtcaaagatagtaccca 289 |||||| |||||| ||||||||||||||||||| ||||||| | ||| || || || | Sbjct: 125753 gaagaagtttgcttcagaatgttgtatgcagccaaacaaaggggacaaggacagcactcg 125812 Query: 290 gaatagcatatatggtgctaatttctcctgcaaaatttctccatggcttgctactggttg 349 ||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| Sbjct: 125813 agatagcatatatggtgctaatttctcctgcaaaatttcaccatggcttgctacaggttg 125872 Query: 350 tctctctccacgtttcatgtatgaggagttgaagaagcatgc 391 ||||| || || ||||||||||||||||||||||||||||| Sbjct: 125873 cctctcaccgcgcttcatgtatgaggagttgaagaagcatgc 125914 Score = 159 bits (80), Expect = 1e-35 Identities = 134/152 (88%) Strand = Plus / Plus Query: 15 ggattcagggaggctgtcaaggggttggaggttaggaaggtgctggacgcgccagaagag 74 ||||||||||||||||| ||||||||||| || |||||||| || |||||||| || ||| Sbjct: 124283 ggattcagggaggctgtgaaggggttggatgtcaggaaggttctcgacgcgccggaggag 124342 Query: 75 gtcaagtgtgtgcctatgaagaatgtgcttgagcctggtgacatccccacgcttggtgag 134 ||||||||||| || |||||||||||||||||||| ||||| ||||||||||||| ||| Sbjct: 124343 gtcaagtgtgttcccatgaagaatgtgcttgagcccggtgagatccccacgcttgccgag 124402 Query: 135 cttggactctctgcaccaccggccatggcaca 166 || || ||| | || ||||||||||||||||| Sbjct: 124403 ctcggcctcaccgcgccaccggccatggcaca 124434 Score = 133 bits (67), Expect = 8e-28 Identities = 94/103 (91%) Strand = Plus / Plus Query: 396 agagcaattccatcagggtcaacacccaaggacggtgacggaacatcagatgctgggaca 455 |||||||||||||| || |||||||||||| | ||||| || ||||| |||||||| ||| Sbjct: 126029 agagcaattccatcgggatcaacacccaagaatggtgatggcacatctgatgctggtaca 126088 Query: 456 aattggttaatgtttgaattgctatggagagatttcttcaggt 498 |||||||||||||| |||||||||||||||||||||||||||| Sbjct: 126089 aattggttaatgttcgaattgctatggagagatttcttcaggt 126131
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 455 aaattggttaatgtttgaattgctatggagagatttctt 493 |||||| |||||||| ||||||||||||||||||||||| Sbjct: 14524905 aaattgattaatgttcgaattgctatggagagatttctt 14524943
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Plus Query: 455 aaattggttaatgtttgaattgctatggagagatttctt 493 |||||| |||||||| ||||||||||||||||||||||| Sbjct: 14479189 aaattgattaatgttcgaattgctatggagagatttctt 14479227
>emb|AL772414.3|CNS08C9S Oryza sativa chromosome 12, . BAC OSJNBa0040E18 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 158261 Score = 61.9 bits (31), Expect = 2e-06 Identities = 37/39 (94%) Strand = Plus / Minus Query: 455 aaattggttaatgtttgaattgctatggagagatttctt 493 |||||| |||||||| ||||||||||||||||||||||| Sbjct: 136388 aaattgattaatgttcgaattgctatggagagatttctt 136350
>ref|NM_130327.3| Arabidopsis thaliana PHR2 (PHOTOLYASE/BLUE-LIGHT RECEPTOR 2) AT2G47590 (PHR2) mRNA, complete cds Length = 1766 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 459 tggttaatgtttgaattgctatggagagatttcttcaggttcgtcacaaagaagtacagc 518 |||||||||| ||| ||||||||||| |||||||||||||| | || ||||| |||||| Sbjct: 1316 tggttaatgtatgagttgctatggagggatttcttcaggtttataaccaagaaatacagc 1375 Query: 519 tc 520 || Sbjct: 1376 tc 1377
>emb|BX819772.1|CNS0A8GH Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS25ZD12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1467 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 459 tggttaatgtttgaattgctatggagagatttcttcaggttcgtcacaaagaagtacagc 518 |||||||||| ||| ||||||||||| |||||||||||||| | || ||||| |||||| Sbjct: 1215 tggttaatgtatgagttgctatggagggatttcttcaggtttataaccaagaaatacagc 1274 Query: 519 tc 520 || Sbjct: 1275 tc 1276
>gb|AY087383.1| Arabidopsis thaliana clone 34800 mRNA, complete sequence Length = 1631 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 459 tggttaatgtttgaattgctatggagagatttcttcaggttcgtcacaaagaagtacagc 518 |||||||||| ||| ||||||||||| |||||||||||||| | || ||||| |||||| Sbjct: 1242 tggttaatgtatgagttgctatggagggatttcttcaggtttataaccaagaaatacagc 1301 Query: 519 tc 520 || Sbjct: 1302 tc 1303
>gb|AF053366.1|AF053366 Arabidopsis thaliana photolyase/blue light photoreceptor PHR2 (PHR2) mRNA, complete cds Length = 1431 Score = 60.0 bits (30), Expect = 9e-06 Identities = 54/62 (87%) Strand = Plus / Plus Query: 459 tggttaatgtttgaattgctatggagagatttcttcaggttcgtcacaaagaagtacagc 518 |||||||||| ||| ||||||||||| |||||||||||||| | || ||||| |||||| Sbjct: 1294 tggttaatgtatgagttgctatggagggatttcttcaggtttataaccaagaaatacagc 1353 Query: 519 tc 520 || Sbjct: 1354 tc 1355
>gb|AC002535.3| Arabidopsis thaliana chromosome 2 clone T30B22 map CIC06C03, complete sequence Length = 98937 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Minus Query: 459 tggttaatgtttgaattgctatggagagatttcttcaggt 498 |||||||||| ||| ||||||||||| ||||||||||||| Sbjct: 25122 tggttaatgtatgagttgctatggagggatttcttcaggt 25083
>gb|AC152937.21| Medicago truncatula clone mth2-96n6, complete sequence Length = 108802 Score = 48.1 bits (24), Expect = 0.034 Identities = 39/44 (88%) Strand = Plus / Plus Query: 292 atagcatatatggtgctaatttctcctgcaaaatttctccatgg 335 |||| ||||||||||| || || || |||||||||||||||||| Sbjct: 11470 atagtatatatggtgccaacttttcatgcaaaatttctccatgg 11513 Score = 46.1 bits (23), Expect = 0.14 Identities = 38/43 (88%) Strand = Plus / Plus Query: 456 aattggttaatgtttgaattgctatggagagatttcttcaggt 498 |||||||| |||||||| ||||||||||| || ||||| |||| Sbjct: 11713 aattggttgatgtttgagttgctatggagggacttctttaggt 11755
>emb|BX819264.1|CNS0A8SM Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTFB61ZF06 of Flowers and buds of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1537 Score = 48.1 bits (24), Expect = 0.034 Identities = 33/36 (91%) Strand = Plus / Plus Query: 459 tggttaatgtttgaattgctatggagagatttcttc 494 |||||||||| ||| ||||||||||| ||||||||| Sbjct: 1230 tggttaatgtatgagttgctatggagggatttcttc 1265
>emb|AL136460.28| Human DNA sequence from clone RP11-102J14 on chromosome 20 Contains a novel gene and the PA2G4P2 gene for proliferation-associated 2G4 pseudogene 2, complete sequence Length = 139030 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Plus Query: 315 tcctgcaaaatttctccatggc 336 |||||||||||||||||||||| Sbjct: 88963 tcctgcaaaatttctccatggc 88984
>ref|NM_060412.1| Caenorhabditis elegans B0205.5 (B0205.5) mRNA, complete cds Length = 300 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 ccacgcttggtgagcttggact 142 |||||||||||||||||||||| Sbjct: 212 ccacgcttggtgagcttggact 191
>gb|AF067211.2| Caenorhabditis elegans cosmid B0205, complete sequence Length = 40951 Score = 44.1 bits (22), Expect = 0.54 Identities = 22/22 (100%) Strand = Plus / Minus Query: 121 ccacgcttggtgagcttggact 142 |||||||||||||||||||||| Sbjct: 34375 ccacgcttggtgagcttggact 34354
>gb|BT013885.1| Lycopersicon esculentum clone 132866F, mRNA sequence Length = 1649 Score = 42.1 bits (21), Expect = 2.1 Identities = 75/93 (80%) Strand = Plus / Plus Query: 294 agcatatatggtgctaatttctcctgcaaaatttctccatggcttgctactggttgtctc 353 |||||||||||||| || || || |||||||| || || ||| | |||| || |||||| Sbjct: 1230 agcatatatggtgcaaacttttcttgcaaaatatcgccttggttagctatgggatgtctc 1289 Query: 354 tctccacgtttcatgtatgaggagttgaagaag 386 || || |||| ||||| ||| || ||||||||| Sbjct: 1290 tcaccccgttccatgtttgatgaattgaagaag 1322
>ref|XM_777733.1| PREDICTED: Strongylocentrotus purpuratus similar to centrosome-associated protein 350 (LOC577510), mRNA Length = 10727 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Minus Query: 97 atgtgcttgagcctggtgacatccc 121 |||| |||||||||||||||||||| Sbjct: 3955 atgtccttgagcctggtgacatccc 3931
>gb|AC164579.5| Mus musculus 6 BAC RP23-384P24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 214578 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 ctggttgtctctctccacgtt 363 ||||||||||||||||||||| Sbjct: 179521 ctggttgtctctctccacgtt 179541
>gb|AC158662.7| Mus musculus 6 BAC RP23-20K24 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 250218 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 343 ctggttgtctctctccacgtt 363 ||||||||||||||||||||| Sbjct: 108204 ctggttgtctctctccacgtt 108224
>gb|AC022092.8| Homo sapiens chromosome 5 clone CTB-138E5, complete sequence Length = 102444 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 208 aagcagaagccctggaaaggc 228 ||||||||||||||||||||| Sbjct: 56248 aagcagaagccctggaaaggc 56228
>ref|XM_632379.1| Dictyostelium discoideum hypothetical protein (DDB0187198), partial mRNA Length = 2073 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 192 aatcttattggtggtgaagc 211 |||||||||||||||||||| Sbjct: 1264 aatcttattggtggtgaagc 1283
>ref|NM_001031221.1| Gallus gallus coiled-coil domain containing 6 (CCDC6), mRNA Length = 4004 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctaatttctcctgcaaaatt 326 |||||||||||||||||||| Sbjct: 781 ctaatttctcctgcaaaatt 762
>ref|NM_174412.2| Bos taurus proprotein convertase subtilisin/kexin type 1 (PCSK1), mRNA Length = 2694 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gaagccctggaaaggctgaa 232 |||||||||||||||||||| Sbjct: 2190 gaagccctggaaaggctgaa 2209
>ref|XM_748560.1| Aspergillus fumigatus Af293 hypothetical protein (Afu5g09870) partial mRNA Length = 561 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 142 tctctgcaccaccggccatg 161 |||||||||||||||||||| Sbjct: 524 tctctgcaccaccggccatg 543
>ref|NM_019757.1| Mus musculus fizzy/cell division cycle 20 related 1 (Drosophila) (Fzr1), mRNA Length = 2258 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 671 aaggtgctggacgcgccaga 690
>gb|AC159474.9| Mus musculus 10 BAC RP23-28P17 (Roswell Park Cancer Institute (C57BL/6J Female) Mouse BAC Library) complete sequence Length = 230201 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 205553 aaggtgctggacgcgccaga 205572
>gb|AC138739.8| Mus musculus chromosome 9, clone RP23-380A10, complete sequence Length = 217813 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 66 ccagaagaggtcaagtgtgt 85 |||||||||||||||||||| Sbjct: 50639 ccagaagaggtcaagtgtgt 50620
>gb|AC100847.2| Homo sapiens chromosome 18, clone RP11-706P11, complete sequence Length = 186784 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 aagccctggaaaggctgaagaaatttgc 241 ||||||| |||||||| ||||||||||| Sbjct: 40303 aagcccttgaaaggctaaagaaatttgc 40276
>emb|Z83848.1|HS57A13 Human DNA sequence from clone RP1-57A13 on chromosome Xq24 Contains the 5' end of the GRIA3 gene for glutamate receptor, ionotrophic, AMPA 3, the gene for a novel protein and a CpG island, complete sequence Length = 169693 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 217 ccctggaaaggctgaagaaa 236 |||||||||||||||||||| Sbjct: 15312 ccctggaaaggctgaagaaa 15331
>emb|AJ851457.1| Gallus gallus mRNA for hypothetical protein, clone 3i14 Length = 4004 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 307 ctaatttctcctgcaaaatt 326 |||||||||||||||||||| Sbjct: 781 ctaatttctcctgcaaaatt 762
>gb|AC027097.10| Homo sapiens chromosome 18, clone RP11-35G9, complete sequence Length = 164403 Score = 40.1 bits (20), Expect = 8.4 Identities = 26/28 (92%) Strand = Plus / Minus Query: 214 aagccctggaaaggctgaagaaatttgc 241 ||||||| |||||||| ||||||||||| Sbjct: 154261 aagcccttgaaaggctaaagaaatttgc 154234
>gb|AC148226.7| Medicago truncatula clone mth2-5i20, complete sequence Length = 84259 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 454 caaattggttaatgtttgaa 473 |||||||||||||||||||| Sbjct: 79602 caaattggttaatgtttgaa 79621
>dbj|AK154822.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630107M13 product:fizzy/cell division cycle 20 related 1 (Drosophila), full insert sequence Length = 2337 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 755 aaggtgctggacgcgccaga 774
>dbj|AK155370.1| Mus musculus NOD-derived CD11c +ve dendritic cells cDNA, RIKEN full-length enriched library, clone:F630222J17 product:fizzy/cell division cycle 20 related 1 (Drosophila), full insert sequence Length = 2333 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 753 aaggtgctggacgcgccaga 772
>dbj|AK163951.1| Mus musculus 0 day neonate cerebellum cDNA, RIKEN full-length enriched library, clone:C230097E21 product:fizzy/cell division cycle 20 related 1 (Drosophila), full insert sequence Length = 2320 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 730 aaggtgctggacgcgccaga 749
>gb|AC155937.4| Mus musculus 10 BAC RP24-535C14 (Roswell Park Cancer Institute (C57BL/6J Male) Mouse BAC Library) complete sequence Length = 152468 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 95114 aaggtgctggacgcgccaga 95095
>dbj|AK172679.1| Mus musculus activated spleen cDNA, RIKEN full-length enriched library, clone:F830228B21 product:fizzy/cell division cycle 20 related 1 (Drosophila), full insert sequence Length = 2781 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 765 aaggtgctggacgcgccaga 784
>dbj|AK081476.1| Mus musculus 16 days embryo head cDNA, RIKEN full-length enriched library, clone:C130019O22 product:frizzy-related protein 1 (Drosophila), full insert sequence Length = 1818 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 725 aaggtgctggacgcgccaga 744
>dbj|AK051993.1| Mus musculus 12 days embryo eyeball cDNA, RIKEN full-length enriched library, clone:D230032K01 product:FIZZY-RELATED PROTEIN (FZR1 PROTEIN) homolog [Mus musculus], full insert sequence Length = 1958 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 754 aaggtgctggacgcgccaga 773
>dbj|AK083686.1| Mus musculus 9 days embryo whole body cDNA, RIKEN full-length enriched library, clone:D030066M09 product:FIZZY-RELATED PROTEIN (FZR1 PROTEIN) homolog [Mus musculus], full insert sequence Length = 2982 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 734 aaggtgctggacgcgccaga 753
>emb|BX511313.20| Mouse DNA sequence from clone RP24-391O14 on chromosome X, complete sequence Length = 178972 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 376 agttgaagaagcatgccatt 395 |||||||||||||||||||| Sbjct: 25893 agttgaagaagcatgccatt 25874
>gb|AF186405.1|AF186405 Bos taurus prohormone convertase 1 (PC1) mRNA, complete cds Length = 2694 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 213 gaagccctggaaaggctgaa 232 |||||||||||||||||||| Sbjct: 2190 gaagccctggaaaggctgaa 2209
>ref|XM_243390.3| PREDICTED: Rattus norvegicus fizzy/cell division cycle 20 related 1 (Drosophila) (predicted) (Fzr1_predicted), mRNA Length = 2362 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 753 aaggtgctggacgcgccaga 772
>dbj|AK203764.1| Mus musculus cDNA, clone:Y1G0146B16, strand:minus, reference:ENSEMBL:Mouse-Transcript- ENST:ENSMUST00000020457, based on BLAT search Length = 167 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 98 aaggtgctggacgcgccaga 117
>emb|BX005386.8| Zebrafish DNA sequence from clone DKEY-21M1 in linkage group 1, complete sequence Length = 170040 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 458 ttggttaatgtttgaattgc 477 |||||||||||||||||||| Sbjct: 86534 ttggttaatgtttgaattgc 86553
>gb|BC006616.1| Mus musculus fizzy/cell division cycle 20 related 1 (Drosophila), mRNA (cDNA clone MGC:11723 IMAGE:3967009), complete cds Length = 1861 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 752 aaggtgctggacgcgccaga 771
>gb|AF083809.1|AF083809 Mus musculus fizzy-related protein (Fyr) mRNA, complete cds Length = 2258 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 51 aaggtgctggacgcgccaga 70 |||||||||||||||||||| Sbjct: 671 aaggtgctggacgcgccaga 690
>gb|AC103352.8| Mus musculus chromosome 8, clone RP23-418G1, complete sequence Length = 207330 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tttgaattgctatggagaga 487 |||||||||||||||||||| Sbjct: 173613 tttgaattgctatggagaga 173594
>emb|AL672101.22| Mouse DNA sequence from clone RP23-170E12 on chromosome X, complete sequence Length = 159735 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 96 aatgtgcttgagcctggtga 115 |||||||||||||||||||| Sbjct: 99491 aatgtgcttgagcctggtga 99472
>emb|AL591582.32| Mouse DNA sequence from clone RP23-403P3 on chromosome 12, complete sequence Length = 168814 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Plus Query: 195 cttattggtggtgaagcaga 214 |||||||||||||||||||| Sbjct: 54935 cttattggtggtgaagcaga 54954
>gb|AC163442.16| Mus musculus chromosome 8, clone RP23-441L19, complete sequence Length = 214994 Score = 40.1 bits (20), Expect = 8.4 Identities = 20/20 (100%) Strand = Plus / Minus Query: 468 tttgaattgctatggagaga 487 |||||||||||||||||||| Sbjct: 67163 tttgaattgctatggagaga 67144 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 5,598,195 Number of Sequences: 3902068 Number of extensions: 5598195 Number of successful extensions: 101254 Number of sequences better than 10.0: 57 Number of HSP's better than 10.0 without gapping: 57 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 101055 Number of HSP's gapped (non-prelim): 195 length of query: 616 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 593 effective length of database: 17,143,297,704 effective search space: 10165975538472 effective search space used: 10165975538472 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)