| Clone Name | baal30n14 |
|---|---|
| Clone Library Name | barley_pub |
>ref|XM_478377.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1469 Score = 587 bits (296), Expect = e-164 Identities = 431/476 (90%) Strand = Plus / Plus Query: 2 gaggaggtcgacaaggtggagctcgtttactccaagttcgtcaacctcgtccgctccgac 61 |||| ||| ||||||||||||||| | ||||||||||||||| |||||||||||||||| Sbjct: 644 gaggcggtggacaaggtggagctcctctactccaagttcgtctccctcgtccgctccgac 703 Query: 62 cccatcatccagacgctgctgcccatgtcccctaagggcgagatctgcgacgtcaacggc 121 |||||||||||||||||||| |||||||| || ||||| |||||||||||| |||||||| Sbjct: 704 cccatcatccagacgctgctccccatgtcgcccaagggggagatctgcgacatcaacggc 763 Query: 122 atctgtgtcgacgccaccgaggacgagctcttcaagctcaccaccaaggaaggcaagctc 181 | || || |||||||||||||||||||| ||| |||||||||||||||||| ||||| Sbjct: 764 gtgtgcgtggacgccaccgaggacgagctgttccggctcaccaccaaggaagggaagctg 823 Query: 182 accgtggagcgcgagaagatcaagatcgagatgcagcccttctcccccgtcgtccagttc 241 ||||||||||| |||||| | |||||||||| |||||||||||| ||||| || |||||| Sbjct: 824 accgtggagcgggagaaggtgaagatcgagacgcagcccttctcacccgtggtgcagttc 883 Query: 242 gagcaggaccccgtccagatcctcgacgctctcctcccgctctacctcaacagccagatc 301 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 884 gagcaggaccccgtccagatcctcgacgcgctcctcccgctctacctcaacagccagatc 943 Query: 302 ctgcgtgccctccaggagtcgctcgctagcgagctcgcagccaggatgagcgccatgagc 361 || || || ||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 944 ctccgcgcgctccaggagtcgctcgccagcgagctcgccgccaggatgagcgccatgagc 1003 Query: 362 agcgccacagacaatgccatcgatctccgaaaaaatctctccatggtctacaatcgccga 421 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| |||| Sbjct: 1004 agcgccaccgacaacgccatcgagctccggaagaacctctccatggtctacaaccgccag 1063 Query: 422 cgccaggccaagatcaccggagagatccttgagatcgtcgctggcgccgacgccct 477 |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 1064 cgccaggccaagatcaccggcgagatcctcgagatcgtcgccggcgccgacgccct 1119
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 587 bits (296), Expect = e-164 Identities = 431/476 (90%) Strand = Plus / Minus Query: 2 gaggaggtcgacaaggtggagctcgtttactccaagttcgtcaacctcgtccgctccgac 61 |||| ||| ||||||||||||||| | ||||||||||||||| |||||||||||||||| Sbjct: 19603237 gaggcggtggacaaggtggagctcctctactccaagttcgtctccctcgtccgctccgac 19603178 Query: 62 cccatcatccagacgctgctgcccatgtcccctaagggcgagatctgcgacgtcaacggc 121 |||||||||||||||||||| |||||||| || ||||| |||||||||||| |||||||| Sbjct: 19603177 cccatcatccagacgctgctccccatgtcgcccaagggggagatctgcgacatcaacggc 19603118 Query: 122 atctgtgtcgacgccaccgaggacgagctcttcaagctcaccaccaaggaaggcaagctc 181 | || || |||||||||||||||||||| ||| |||||||||||||||||| ||||| Sbjct: 19603117 gtgtgcgtggacgccaccgaggacgagctgttccggctcaccaccaaggaagggaagctg 19603058 Query: 182 accgtggagcgcgagaagatcaagatcgagatgcagcccttctcccccgtcgtccagttc 241 ||||||||||| |||||| | |||||||||| |||||||||||| ||||| || |||||| Sbjct: 19603057 accgtggagcgggagaaggtgaagatcgagacgcagcccttctcacccgtggtgcagttc 19602998 Query: 242 gagcaggaccccgtccagatcctcgacgctctcctcccgctctacctcaacagccagatc 301 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 19602997 gagcaggaccccgtccagatcctcgacgcgctcctcccgctctacctcaacagccagatc 19602938 Query: 302 ctgcgtgccctccaggagtcgctcgctagcgagctcgcagccaggatgagcgccatgagc 361 || || || ||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 19602937 ctccgcgcgctccaggagtcgctcgccagcgagctcgccgccaggatgagcgccatgagc 19602878 Query: 362 agcgccacagacaatgccatcgatctccgaaaaaatctctccatggtctacaatcgccga 421 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| |||| Sbjct: 19602877 agcgccaccgacaacgccatcgagctccggaagaacctctccatggtctacaaccgccag 19602818 Query: 422 cgccaggccaagatcaccggagagatccttgagatcgtcgctggcgccgacgccct 477 |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 19602817 cgccaggccaagatcaccggcgagatcctcgagatcgtcgccggcgccgacgccct 19602762
>dbj|AP005196.4| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0580A11 Length = 174673 Score = 587 bits (296), Expect = e-164 Identities = 431/476 (90%) Strand = Plus / Minus Query: 2 gaggaggtcgacaaggtggagctcgtttactccaagttcgtcaacctcgtccgctccgac 61 |||| ||| ||||||||||||||| | ||||||||||||||| |||||||||||||||| Sbjct: 146581 gaggcggtggacaaggtggagctcctctactccaagttcgtctccctcgtccgctccgac 146522 Query: 62 cccatcatccagacgctgctgcccatgtcccctaagggcgagatctgcgacgtcaacggc 121 |||||||||||||||||||| |||||||| || ||||| |||||||||||| |||||||| Sbjct: 146521 cccatcatccagacgctgctccccatgtcgcccaagggggagatctgcgacatcaacggc 146462 Query: 122 atctgtgtcgacgccaccgaggacgagctcttcaagctcaccaccaaggaaggcaagctc 181 | || || |||||||||||||||||||| ||| |||||||||||||||||| ||||| Sbjct: 146461 gtgtgcgtggacgccaccgaggacgagctgttccggctcaccaccaaggaagggaagctg 146402 Query: 182 accgtggagcgcgagaagatcaagatcgagatgcagcccttctcccccgtcgtccagttc 241 ||||||||||| |||||| | |||||||||| |||||||||||| ||||| || |||||| Sbjct: 146401 accgtggagcgggagaaggtgaagatcgagacgcagcccttctcacccgtggtgcagttc 146342 Query: 242 gagcaggaccccgtccagatcctcgacgctctcctcccgctctacctcaacagccagatc 301 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 146341 gagcaggaccccgtccagatcctcgacgcgctcctcccgctctacctcaacagccagatc 146282 Query: 302 ctgcgtgccctccaggagtcgctcgctagcgagctcgcagccaggatgagcgccatgagc 361 || || || ||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 146281 ctccgcgcgctccaggagtcgctcgccagcgagctcgccgccaggatgagcgccatgagc 146222 Query: 362 agcgccacagacaatgccatcgatctccgaaaaaatctctccatggtctacaatcgccga 421 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| |||| Sbjct: 146221 agcgccaccgacaacgccatcgagctccggaagaacctctccatggtctacaaccgccag 146162 Query: 422 cgccaggccaagatcaccggagagatccttgagatcgtcgctggcgccgacgccct 477 |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 146161 cgccaggccaagatcaccggcgagatcctcgagatcgtcgccggcgccgacgccct 146106
>dbj|AP005176.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OSJNBb0041J06 Length = 138157 Score = 587 bits (296), Expect = e-164 Identities = 431/476 (90%) Strand = Plus / Minus Query: 2 gaggaggtcgacaaggtggagctcgtttactccaagttcgtcaacctcgtccgctccgac 61 |||| ||| ||||||||||||||| | ||||||||||||||| |||||||||||||||| Sbjct: 41887 gaggcggtggacaaggtggagctcctctactccaagttcgtctccctcgtccgctccgac 41828 Query: 62 cccatcatccagacgctgctgcccatgtcccctaagggcgagatctgcgacgtcaacggc 121 |||||||||||||||||||| |||||||| || ||||| |||||||||||| |||||||| Sbjct: 41827 cccatcatccagacgctgctccccatgtcgcccaagggggagatctgcgacatcaacggc 41768 Query: 122 atctgtgtcgacgccaccgaggacgagctcttcaagctcaccaccaaggaaggcaagctc 181 | || || |||||||||||||||||||| ||| |||||||||||||||||| ||||| Sbjct: 41767 gtgtgcgtggacgccaccgaggacgagctgttccggctcaccaccaaggaagggaagctg 41708 Query: 182 accgtggagcgcgagaagatcaagatcgagatgcagcccttctcccccgtcgtccagttc 241 ||||||||||| |||||| | |||||||||| |||||||||||| ||||| || |||||| Sbjct: 41707 accgtggagcgggagaaggtgaagatcgagacgcagcccttctcacccgtggtgcagttc 41648 Query: 242 gagcaggaccccgtccagatcctcgacgctctcctcccgctctacctcaacagccagatc 301 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 41647 gagcaggaccccgtccagatcctcgacgcgctcctcccgctctacctcaacagccagatc 41588 Query: 302 ctgcgtgccctccaggagtcgctcgctagcgagctcgcagccaggatgagcgccatgagc 361 || || || ||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 41587 ctccgcgcgctccaggagtcgctcgccagcgagctcgccgccaggatgagcgccatgagc 41528 Query: 362 agcgccacagacaatgccatcgatctccgaaaaaatctctccatggtctacaatcgccga 421 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| |||| Sbjct: 41527 agcgccaccgacaacgccatcgagctccggaagaacctctccatggtctacaaccgccag 41468 Query: 422 cgccaggccaagatcaccggagagatccttgagatcgtcgctggcgccgacgccct 477 |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 41467 cgccaggccaagatcaccggcgagatcctcgagatcgtcgccggcgccgacgccct 41412
>dbj|AK072104.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013116B21, full insert sequence Length = 1470 Score = 587 bits (296), Expect = e-164 Identities = 431/476 (90%) Strand = Plus / Plus Query: 2 gaggaggtcgacaaggtggagctcgtttactccaagttcgtcaacctcgtccgctccgac 61 |||| ||| ||||||||||||||| | ||||||||||||||| |||||||||||||||| Sbjct: 644 gaggcggtggacaaggtggagctcctctactccaagttcgtctccctcgtccgctccgac 703 Query: 62 cccatcatccagacgctgctgcccatgtcccctaagggcgagatctgcgacgtcaacggc 121 |||||||||||||||||||| |||||||| || ||||| |||||||||||| |||||||| Sbjct: 704 cccatcatccagacgctgctccccatgtcgcccaagggggagatctgcgacatcaacggc 763 Query: 122 atctgtgtcgacgccaccgaggacgagctcttcaagctcaccaccaaggaaggcaagctc 181 | || || |||||||||||||||||||| ||| |||||||||||||||||| ||||| Sbjct: 764 gtgtgcgtggacgccaccgaggacgagctgttccggctcaccaccaaggaagggaagctg 823 Query: 182 accgtggagcgcgagaagatcaagatcgagatgcagcccttctcccccgtcgtccagttc 241 ||||||||||| |||||| | |||||||||| |||||||||||| ||||| || |||||| Sbjct: 824 accgtggagcgggagaaggtgaagatcgagacgcagcccttctcacccgtggtgcagttc 883 Query: 242 gagcaggaccccgtccagatcctcgacgctctcctcccgctctacctcaacagccagatc 301 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 884 gagcaggaccccgtccagatcctcgacgcgctcctcccgctctacctcaacagccagatc 943 Query: 302 ctgcgtgccctccaggagtcgctcgctagcgagctcgcagccaggatgagcgccatgagc 361 || || || ||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 944 ctccgcgcgctccaggagtcgctcgccagcgagctcgccgccaggatgagcgccatgagc 1003 Query: 362 agcgccacagacaatgccatcgatctccgaaaaaatctctccatggtctacaatcgccga 421 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| |||| Sbjct: 1004 agcgccaccgacaacgccatcgagctccggaagaacctctccatggtctacaaccgccag 1063 Query: 422 cgccaggccaagatcaccggagagatccttgagatcgtcgctggcgccgacgccct 477 |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 1064 cgccaggccaagatcaccggcgagatcctcgagatcgtcgccggcgccgacgccct 1119
>dbj|AK105071.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-045-C11, full insert sequence Length = 2822 Score = 579 bits (292), Expect = e-162 Identities = 430/476 (90%) Strand = Plus / Plus Query: 2 gaggaggtcgacaaggtggagctcgtttactccaagttcgtcaacctcgtccgctccgac 61 |||| ||| ||||||||||||||| | ||||||||||||||| |||||||||||||||| Sbjct: 2109 gaggcggtggacaaggtggagctcctctactccaagttcgtctccctcgtccgctccgac 2168 Query: 62 cccatcatccagacgctgctgcccatgtcccctaagggcgagatctgcgacgtcaacggc 121 |||||||||||||||||||| |||||||| || ||||| |||||||||||| |||||||| Sbjct: 2169 cccatcatccagacgctgctccccatgtcgcccaagggggagatctgcgacatcaacggc 2228 Query: 122 atctgtgtcgacgccaccgaggacgagctcttcaagctcaccaccaaggaaggcaagctc 181 | || || |||||||||||||||||||| ||| |||||||||||||||||| ||||| Sbjct: 2229 gtgtgcgtggacgccaccgaggacgagctgttccggctcaccaccaaggaagggaagctg 2288 Query: 182 accgtggagcgcgagaagatcaagatcgagatgcagcccttctcccccgtcgtccagttc 241 ||||||||||| |||||| | |||||||||| |||||||||||| ||||| || |||||| Sbjct: 2289 accgtggagcgggagaaggtgaagatcgagacgcagcccttctcacccgtggtgcagttc 2348 Query: 242 gagcaggaccccgtccagatcctcgacgctctcctcccgctctacctcaacagccagatc 301 |||||||||||||||||||||| |||||| |||||||||||||||||||||||||||||| Sbjct: 2349 gagcaggaccccgtccagatccccgacgcgctcctcccgctctacctcaacagccagatc 2408 Query: 302 ctgcgtgccctccaggagtcgctcgctagcgagctcgcagccaggatgagcgccatgagc 361 || || || ||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 2409 ctccgcgcgctccaggagtcgctcgccagcgagctcgccgccaggatgagcgccatgagc 2468 Query: 362 agcgccacagacaatgccatcgatctccgaaaaaatctctccatggtctacaatcgccga 421 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| |||| Sbjct: 2469 agcgccaccgacaacgccatcgagctccggaagaacctctccatggtctacaaccgccag 2528 Query: 422 cgccaggccaagatcaccggagagatccttgagatcgtcgctggcgccgacgccct 477 |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 2529 cgccaggccaagatcaccggcgagatcctcgagatcgtcgccggcgccgacgccct 2584
>dbj|AK064835.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013000F20, full insert sequence Length = 1482 Score = 579 bits (292), Expect = e-162 Identities = 430/476 (90%) Strand = Plus / Plus Query: 2 gaggaggtcgacaaggtggagctcgtttactccaagttcgtcaacctcgtccgctccgac 61 |||| ||| ||||||||||||||| | ||||||||||||||| |||||||||||||||| Sbjct: 749 gaggcggtggacaaggtggagctcctctactccaagttcgtctccctcgtccgctccgac 808 Query: 62 cccatcatccagacgctgctgcccatgtcccctaagggcgagatctgcgacgtcaacggc 121 |||||||||||||||||||| |||||||| || ||||| |||||||||||| |||||||| Sbjct: 809 cccatcatccagacgctgctccccatgtcgcccaagggggagatctgcgacatcaacggc 868 Query: 122 atctgtgtcgacgccaccgaggacgagctcttcaagctcaccaccaaggaaggcaagctc 181 | || || |||||||||||||||||||| ||| |||||||||||||||||| ||||| Sbjct: 869 gtgtgcgtggacgccaccgaggacgagctgttccggctcaccaccaaggaagggaagctg 928 Query: 182 accgtggagcgcgagaagatcaagatcgagatgcagcccttctcccccgtcgtccagttc 241 ||||||| ||| |||||| | |||||||||| |||||||||||| ||||| || |||||| Sbjct: 929 accgtggggcgggagaaggtgaagatcgagacgcagcccttctcacccgtggtgcagttc 988 Query: 242 gagcaggaccccgtccagatcctcgacgctctcctcccgctctacctcaacagccagatc 301 ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||| Sbjct: 989 gagcaggaccccgtccagatcctcgacgcgctcctcccgctctacctcaacagccagatc 1048 Query: 302 ctgcgtgccctccaggagtcgctcgctagcgagctcgcagccaggatgagcgccatgagc 361 || || || ||||||||||||||||| ||||||||||| ||||||||||||||||||||| Sbjct: 1049 ctccgcgcgctccaggagtcgctcgccagcgagctcgccgccaggatgagcgccatgagc 1108 Query: 362 agcgccacagacaatgccatcgatctccgaaaaaatctctccatggtctacaatcgccga 421 |||||||| ||||| |||||||| ||||| || || ||||||||||||||||| |||| Sbjct: 1109 agcgccaccgacaacgccatcgagctccggaagaacctctccatggtctacaaccgccag 1168 Query: 422 cgccaggccaagatcaccggagagatccttgagatcgtcgctggcgccgacgccct 477 |||||||||||||||||||| |||||||| ||||||||||| |||||||||||||| Sbjct: 1169 cgccaggccaagatcaccggcgagatcctcgagatcgtcgccggcgccgacgccct 1224
>gb|AY108268.1| Zea mays PCO078526 mRNA sequence Length = 1437 Score = 539 bits (272), Expect = e-150 Identities = 425/476 (89%) Strand = Plus / Plus Query: 2 gaggaggtcgacaaggtggagctcgtttactccaagttcgtcaacctcgtccgctccgac 61 |||||||| |||||||||||||| | |||||||||||||| || || ||||||||| Sbjct: 693 gaggaggtggacaaggtggagctgctctactccaagttcgtgtcgctggtgcgctccgac 752 Query: 62 cccatcatccagacgctgctgcccatgtcccctaagggcgagatctgcgacgtcaacggc 121 |||||||||||||||||||| |||||||| || ||||||||||||||||||||||||||| Sbjct: 753 cccatcatccagacgctgctccccatgtcgcccaagggcgagatctgcgacgtcaacggc 812 Query: 122 atctgtgtcgacgccaccgaggacgagctcttcaagctcaccaccaaggaaggcaagctc 181 |||| || |||||||||||||||||||||||| |||||||||||||| || |||||| Sbjct: 813 gtctgcgtggacgccaccgaggacgagctcttccgcctcaccaccaaggaggggaagctc 872 Query: 182 accgtggagcgcgagaagatcaagatcgagatgcagcccttctcccccgtcgtccagttc 241 |||||||||||||||||| | |||||||||| |||||||||||||||||| || |||||| Sbjct: 873 accgtggagcgcgagaaggtgaagatcgagacgcagcccttctcccccgtggtgcagttc 932 Query: 242 gagcaggaccccgtccagatcctcgacgctctcctcccgctctacctcaacagccagatc 301 |||||||||||||| |||||||| ||||| || ||||||||||||||||||||||||||| Sbjct: 933 gagcaggaccccgtgcagatcctggacgcgctgctcccgctctacctcaacagccagatc 992 Query: 302 ctgcgtgccctccaggagtcgctcgctagcgagctcgcagccaggatgagcgccatgagc 361 || |||||||| |||||||||||||| ||||||||||| ||| ||||||||||||||||| Sbjct: 993 ctccgtgccctgcaggagtcgctcgccagcgagctcgccgcccggatgagcgccatgagc 1052 Query: 362 agcgccacagacaatgccatcgatctccgaaaaaatctctccatggtctacaatcgccga 421 |||||||| ||||| |||||||| ||||| || || |||||||| | |||||| || | Sbjct: 1053 agcgccaccgacaacgccatcgagctccgcaagaacctctccatcgcctacaaccgacag 1112 Query: 422 cgccaggccaagatcaccggagagatccttgagatcgtcgctggcgccgacgccct 477 |||||||||||||||||||| |||||||| ||||||||||| || ||||||||||| Sbjct: 1113 cgccaggccaagatcaccggggagatcctcgagatcgtcgccggtgccgacgccct 1168
>gb|J04219.1|CREATPS C.reinhardtii chloroplast ATP synthase gamma subunit mRNA, complete cds Length = 1772 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 60 accccatcatccagacgctgctgcccatgtcccctaagggcgagatctgcgacgtcaacg 119 |||||| ||||||||| |||||||||||| |||| | ||||||| | |||||||| ||| Sbjct: 676 accccaccatccagaccctgctgcccatgacccccatgggcgagctgtgcgacgtggacg 735 Query: 120 gcatctgtgtcgacgccaccgaggacgagctcttcaagctcaccaccaaggaaggcaagc 179 ||| || || |||||| | || |||||| |||||||||| |||||||||| ||| || Sbjct: 736 gcaagtgcgtggacgccgctgacgacgagatcttcaagctgaccaccaagggcggcgagt 795 Query: 180 tcaccgtggagcgcgagaaga 200 || |||||||||||||||||| Sbjct: 796 tcgccgtggagcgcgagaaga 816 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 239 ttcgagcaggaccccgtccagatcctcgacgc 270 ||||||||||| |||| ||||||||| ||||| Sbjct: 855 ttcgagcaggagcccgcccagatcctggacgc 886
>gb|M73493.1|CREATPC Chlamydomonas reinhardtii ATP synthase (CF1) gamma subunit gene, complete CDS Length = 2913 Score = 97.6 bits (49), Expect = 4e-17 Identities = 118/141 (83%) Strand = Plus / Plus Query: 60 accccatcatccagacgctgctgcccatgtcccctaagggcgagatctgcgacgtcaacg 119 |||||| ||||||||| |||||||||||| |||| | ||||||| | |||||||| ||| Sbjct: 1889 accccaccatccagaccctgctgcccatgacccccatgggcgagctgtgcgacgtggacg 1948 Query: 120 gcatctgtgtcgacgccaccgaggacgagctcttcaagctcaccaccaaggaaggcaagc 179 ||| || || |||||| | || |||||| |||||||||| |||||||||| ||| || Sbjct: 1949 gcaagtgcgtggacgccgctgacgacgagatcttcaagctgaccaccaagggcggcgagt 2008 Query: 180 tcaccgtggagcgcgagaaga 200 || |||||||||||||||||| Sbjct: 2009 tcgccgtggagcgcgagaaga 2029 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 239 ttcgagcaggaccccgtccagatcctcgacgc 270 ||||||||||| |||| ||||||||| ||||| Sbjct: 2068 ttcgagcaggagcccgcccagatcctggacgc 2099
>gb|DQ122880.1| Chlamydomonas incerta chloroplast ATP synthase gamma subunit (AtpC) mRNA, partial cds; nuclear gene for chloroplast product Length = 696 Score = 91.7 bits (46), Expect = 3e-15 Identities = 121/146 (82%) Strand = Plus / Plus Query: 55 ctccgaccccatcatccagacgctgctgcccatgtcccctaagggcgagatctgcgacgt 114 |||| |||||| ||||||||| |||||||||||| |||| | ||||||| | |||||||| Sbjct: 318 ctccaaccccaccatccagaccctgctgcccatgacccccatgggcgagctgtgcgacgt 377 Query: 115 caacggcatctgtgtcgacgccaccgaggacgagctcttcaagctcaccaccaaggaagg 174 |||||| || || |||||| |||| || ||| |||||||||| |||||||||| || Sbjct: 378 ggacggcaagtgcgtggacgccgccgacgatgagatcttcaagctgaccaccaagggcgg 437 Query: 175 caagctcaccgtggagcgcgagaaga 200 | | || |||||||||||||||||| Sbjct: 438 cgcgttcgccgtggagcgcgagaaga 463 Score = 40.1 bits (20), Expect = 8.2 Identities = 29/32 (90%) Strand = Plus / Plus Query: 239 ttcgagcaggaccccgtccagatcctcgacgc 270 ||||||||||| |||| ||||||||| ||||| Sbjct: 502 ttcgagcaggagcccgcccagatcctggacgc 533
>emb|X70650.1|OSATPASE O.sinensis mRNA for gamma subunit of plastid ATPase Length = 1327 Score = 69.9 bits (35), Expect = 9e-09 Identities = 71/83 (85%) Strand = Plus / Plus Query: 239 ttcgagcaggaccccgtccagatcctcgacgctctcctcccgctctacctcaacagccag 298 ||||||||||||||| |||||||| || || | ||||||| |||||||||||| ||||| Sbjct: 893 ttcgagcaggaccccatccagatcatcaactccatcctccccctctacctcaacggccag 952 Query: 299 atcctgcgtgccctccaggagtc 321 ||||| || | ||||||||||| Sbjct: 953 atcctccgcacgctccaggagtc 975
>gb|AY826836.1| Isochrysis galbana clone ISATPG1 chloroplast ATP synthase gamma subunit mRNA, partial cds; nuclear gene for chloroplast product Length = 900 Score = 54.0 bits (27), Expect = 5e-04 Identities = 30/31 (96%) Strand = Plus / Plus Query: 273 tcctcccgctctacctcaacagccagatcct 303 |||||||||||||||||||| |||||||||| Sbjct: 855 tcctcccgctctacctcaacggccagatcct 885
>gb|AC087888.12| Homo sapiens 12 BAC RP11-228G3 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 87788 Score = 48.1 bits (24), Expect = 0.034 Identities = 24/24 (100%) Strand = Plus / Plus Query: 514 ttatatataactctttgcctcctt 537 |||||||||||||||||||||||| Sbjct: 75535 ttatatataactctttgcctcctt 75558
>gb|AC136222.2| Oryza sativa (japonica cultivar-group) chromosome 5 clone OSJNBa0088M05, complete sequence Length = 153368 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 cctccttttctcctctcttct 551 ||||||||||||||||||||| Sbjct: 140177 cctccttttctcctctcttct 140157
>gb|AC129330.4| Mus musculus BAC clone RP23-61B8 from chromosome 8, complete sequence Length = 218698 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 cctccttttctcctctcttct 551 ||||||||||||||||||||| Sbjct: 15194 cctccttttctcctctcttct 15174
>gb|AC125536.3| Mus musculus BAC clone RP24-142N21 from chromosome 8, complete sequence Length = 199356 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 cctccttttctcctctcttct 551 ||||||||||||||||||||| Sbjct: 3685 cctccttttctcctctcttct 3705
>emb|AL158817.11| Human DNA sequence from clone RP3-429O6 on chromosome 6 Contains part of a novel gene and a CpG island, complete sequence Length = 120529 Score = 42.1 bits (21), Expect = 2.1 Identities = 24/25 (96%) Strand = Plus / Plus Query: 524 ctctttgcctccttttctcctctct 548 |||||| |||||||||||||||||| Sbjct: 57697 ctcttttcctccttttctcctctct 57721
>gb|AY267622.1| Bigelowiella natans ATP synthase gamma subunit mRNA, complete cds; nuclear gene for plastid product Length = 1351 Score = 42.1 bits (21), Expect = 2.1 Identities = 45/53 (84%) Strand = Plus / Plus Query: 422 cgccaggccaagatcaccggagagatccttgagatcgtcgctggcgccgacgc 474 |||||||| ||||||||| || || ||||||||||||||||| || ||||| Sbjct: 1122 cgccaggctaagatcaccaatgaaattcttgagatcgtcgctggtgcagacgc 1174
>emb|AJ561198.1|NSP561198 Actinomadura sp. ATCC 39727 gene cluster for biosynthesis of glycopeptide antibiotic A40926, strain ATCC 39727 Length = 89153 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 130 cgacgccaccgaggacgagct 150 ||||||||||||||||||||| Sbjct: 54282 cgacgccaccgaggacgagct 54302
>gb|AC068298.16| Homo sapiens 3 BAC RP11-496B10 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 180335 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 527 tttgcctccttttctcctctc 547 ||||||||||||||||||||| Sbjct: 8244 tttgcctccttttctcctctc 8264
>gb|AC118139.3| Homo sapiens BAC clone RP11-461K12 from 4, complete sequence Length = 54171 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 cctccttttctcctctcttct 551 ||||||||||||||||||||| Sbjct: 479 cctccttttctcctctcttct 459
>gb|AC107365.2| Danio rerio, clone -241I7, complete sequence Length = 128411 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 531 cctccttttctcctctcttct 551 ||||||||||||||||||||| Sbjct: 127533 cctccttttctcctctcttct 127553
>gb|DQ337864.1| Uncultured bacterium clone Psedi_nirS-31 NirS (nirS) gene, partial cds Length = 410 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 165 ccaaggaaggcaagctcaccg 185 ||||||||||||||||||||| Sbjct: 173 ccaaggaaggcaagctcaccg 193
>gb|CP000116.1| Thiobacillus denitrificans ATCC 25259, complete genome Length = 2909809 Score = 42.1 bits (21), Expect = 2.1 Identities = 27/29 (93%) Strand = Plus / Minus Query: 132 acgccaccgaggacgagctcttcaagctc 160 |||| ||||||||||||| |||||||||| Sbjct: 2076610 acgcgaccgaggacgagcgcttcaagctc 2076582
>dbj|AP008211.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 5, complete sequence Length = 29737217 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 cctccttttctcctctcttct 551 ||||||||||||||||||||| Sbjct: 18346965 cctccttttctcctctcttct 18346945
>dbj|BA000040.2| Bradyrhizobium japonicum USDA 110 DNA, complete genome Length = 9105828 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 106 ctgcgacgtcaacggcatctg 126 ||||||||||||||||||||| Sbjct: 3383255 ctgcgacgtcaacggcatctg 3383275
>gb|AF088219.1|AF088219 Homo sapiens CC chemokine gene cluster, complete sequence Length = 180919 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Plus Query: 541 tcctctcttctagtacttatc 561 ||||||||||||||||||||| Sbjct: 90330 tcctctcttctagtacttatc 90350
>emb|CR382300.12| Zebrafish DNA sequence from clone DKEY-25E11 in linkage group 19, complete sequence Length = 202006 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 cctccttttctcctctcttct 551 ||||||||||||||||||||| Sbjct: 35736 cctccttttctcctctcttct 35716
>gb|AC006572.2|AC006572 Homo sapiens, clone hRPK.60_A_1, complete sequence Length = 179691 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 531 cctccttttctcctctcttct 551 ||||||||||||||||||||| Sbjct: 178170 cctccttttctcctctcttct 178150
>gb|AC004675.1|AC004675 Homo sapiens chromosome 17, clone hCIT.186_H_2, complete sequence Length = 128501 Score = 42.1 bits (21), Expect = 2.1 Identities = 21/21 (100%) Strand = Plus / Minus Query: 541 tcctctcttctagtacttatc 561 ||||||||||||||||||||| Sbjct: 88163 tcctctcttctagtacttatc 88143
>gb|CP000031.1| Silicibacter pomeroyi DSS-3, complete genome Length = 4109442 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Minus Query: 162 ccaccaaggaaggcaagctcaccg 185 ||||||||||||||||| |||||| Sbjct: 2544809 ccaccaaggaaggcaagatcaccg 2544786
>gb|CP000112.1| Desulfovibrio desulfuricans G20, complete genome Length = 3730232 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 346 gatgagcgccatgagcagcg 365 |||||||||||||||||||| Sbjct: 2764903 gatgagcgccatgagcagcg 2764884
>gb|CP000151.1| Burkholderia sp. 383 chromosome 1, complete sequence Length = 3694126 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 193 cgagaagatcaagatcgaga 212 |||||||||||||||||||| Sbjct: 2806057 cgagaagatcaagatcgaga 2806038
>gb|AC131966.1| Oryza sativa (japonica cultivar-group) chromosome 10 clone OSJNAa0028C16, complete sequence Length = 151030 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcgtcaacctcgtccgctcc 58 |||||||||||||||||||| Sbjct: 4253 tcgtcaacctcgtccgctcc 4272
>gb|CP000010.1| Burkholderia mallei ATCC 23344 chromosome 1, complete sequence Length = 3510148 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cgagaagatcaagatcgaga 212 |||||||||||||||||||| Sbjct: 2294537 cgagaagatcaagatcgaga 2294556
>ref|XM_957789.1| Neurospora crassa OR74A hypothetical protein (NCU06278.1) partial mRNA Length = 3252 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 gtcgacgccaccgaggacgagctcttca 155 |||||||||||| ||||| ||||||||| Sbjct: 2506 gtcgacgccaccaaggaccagctcttca 2533
>ref|XM_326132.1| Neurospora crassa OR74A hypothetical protein (NCU06278.1) partial mRNA Length = 3252 Score = 40.1 bits (20), Expect = 8.2 Identities = 26/28 (92%) Strand = Plus / Plus Query: 128 gtcgacgccaccgaggacgagctcttca 155 |||||||||||| ||||| ||||||||| Sbjct: 2506 gtcgacgccaccaaggaccagctcttca 2533
>gb|CP000124.1| Burkholderia pseudomallei 1710b chromosome I, complete sequence Length = 4126292 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cgagaagatcaagatcgaga 212 |||||||||||||||||||| Sbjct: 1366969 cgagaagatcaagatcgaga 1366988
>gb|DQ356948.1| Crocodilepox virus, complete genome Length = 190054 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 36 agttcgtcaacctcgtccgc 55 |||||||||||||||||||| Sbjct: 130640 agttcgtcaacctcgtccgc 130659
>gb|AC126686.3| Mus musculus BAC clone RP23-148C24 from 18, complete sequence Length = 232817 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 525 tctttgcctccttttctcct 544 |||||||||||||||||||| Sbjct: 78783 tctttgcctccttttctcct 78802
>gb|AY232075.1| Drosophila yakuba clone yak-ad_RpS18 mRNA sequence Length = 456 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggaggaggtcgacaaggtgg 20 |||||||||||||||||||| Sbjct: 183 ggaggaggtcgacaaggtgg 202
>gb|AY231741.1| Drosophila yakuba clone yak-em_RpS18 mRNA sequence Length = 456 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggaggaggtcgacaaggtgg 20 |||||||||||||||||||| Sbjct: 183 ggaggaggtcgacaaggtgg 202
>gb|AC118351.14| Rattus norvegicus 1 BAC CH230-362O18 (Children's Hospital Oakland Research Institute) complete sequence Length = 143705 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 524 ctctttgcctccttttctcc 543 |||||||||||||||||||| Sbjct: 125116 ctctttgcctccttttctcc 125135
>emb|AL365214.16| Human DNA sequence from clone RP11-506B6 on chromosome 6 Contains a fem-1 homolog a (C. elegans) (FEM1A) pseudogene, a keratin 18 (KRT18) pseudogene, a laminin receptor 1 (67kD, ribosomal protein SA) (LAMR1)(RPSA) pseudogene, a hepatocellular carcinoma-related putative tumor suppressor (LPTS) pseudogene and the 3' end of a novel gene, complete sequence Length = 210107 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 536 ttttctcctctcttctagta 555 |||||||||||||||||||| Sbjct: 191728 ttttctcctctcttctagta 191747
>gb|CP000270.1| Burkholderia xenovorans LB400 chromosome 1, complete sequence Length = 4895836 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cgagaagatcaagatcgaga 212 |||||||||||||||||||| Sbjct: 1245969 cgagaagatcaagatcgaga 1245988 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 459 tcgctggcgccgacgccctg 478 |||||||||||||||||||| Sbjct: 1196188 tcgctggcgccgacgccctg 1196169
>emb|BX053660.1|CNS09DKG Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 3-PRIME end of clone FK0AAC31BH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 387 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 64 catcatccagacgctgctgc 83 |||||||||||||||||||| Sbjct: 303 catcatccagacgctgctgc 284
>emb|BX053659.1|CNS09DKF Single read from an extremity of a full-length cDNA clone made from Anopheles gambiae total adult females. 5-PRIME end of clone FK0AAC31BH07 of strain 6-9 of Anopheles gambiae (African malaria mosquito) Length = 567 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 64 catcatccagacgctgctgc 83 |||||||||||||||||||| Sbjct: 471 catcatccagacgctgctgc 490
>gb|AC006454.4| Homo sapiens PAC clone RP5-852P6 from 7, complete sequence Length = 153203 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 489 tcctccctgggctgagctgc 508 |||||||||||||||||||| Sbjct: 13857 tcctccctgggctgagctgc 13876
>emb|BX927151.1| Corynebacterium glutamicum ATCC 13032, IS fingerprint type 4-5, complete genome; segment 4/10 Length = 349459 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gagaagatcaagatcgagat 213 |||||||||||||||||||| Sbjct: 184409 gagaagatcaagatcgagat 184390
>emb|BX571965.1| Burkholderia pseudomallei strain K96243, chromosome 1, complete sequence Length = 4074542 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cgagaagatcaagatcgaga 212 |||||||||||||||||||| Sbjct: 1238891 cgagaagatcaagatcgaga 1238910
>gb|BT024929.1| Drosophila melanogaster IP16603 full insert cDNA Length = 1034 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggaggaggtcgacaaggtgg 20 |||||||||||||||||||| Sbjct: 215 ggaggaggtcgacaaggtgg 234
>emb|AL663060.6| Mouse DNA sequence from clone RP23-239H6 on chromosome 11, complete sequence Length = 218635 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 557 ttatcttgcttggtctgtgt 576 |||||||||||||||||||| Sbjct: 54275 ttatcttgcttggtctgtgt 54294
>gb|AY118434.1| Drosophila melanogaster RH43343 full insert cDNA Length = 617 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggaggaggtcgacaaggtgg 20 |||||||||||||||||||| Sbjct: 239 ggaggaggtcgacaaggtgg 258
>gb|AC011193.3| Homo sapiens chromosome 17, clone RP11-521P1, complete sequence Length = 181022 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 531 cctccttttctcctctcttc 550 |||||||||||||||||||| Sbjct: 27235 cctccttttctcctctcttc 27254
>gb|AC073761.4| Mus musculus chromosome 17 clone RP23-33K21, complete sequence Length = 206801 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 523 actctttgcctccttttctcctct 546 |||||||| ||||||||||||||| Sbjct: 3605 actctttgactccttttctcctct 3628
>gb|AC092745.7| Homo sapiens 12 BAC RP11-90D4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 152599 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gccaggatgagcgccatgag 360 |||||||||||||||||||| Sbjct: 39624 gccaggatgagcgccatgag 39643
>gb|AC092111.9| Homo sapiens 12 BAC RP11-266K4 (Roswell Park Cancer Institute Human BAC Library) complete sequence Length = 138313 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 341 gccaggatgagcgccatgag 360 |||||||||||||||||||| Sbjct: 114714 gccaggatgagcgccatgag 114733
>ref|NM_166383.1| Drosophila melanogaster Ribosomal protein S18 CG8900-RB, transcript variant B (RpS18), mRNA Length = 648 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggaggaggtcgacaaggtgg 20 |||||||||||||||||||| Sbjct: 240 ggaggaggtcgacaaggtgg 259
>dbj|AB232920.1| Oryzias latipes hox gene cluster, complete cds, contains hoxBa, evx homologue on hoxBa Length = 235883 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 532 ctccttttctcctctcttct 551 |||||||||||||||||||| Sbjct: 76937 ctccttttctcctctcttct 76918
>ref|NM_057616.3| Drosophila melanogaster Ribosomal protein S18 CG8900-RA, transcript variant A (RpS18), mRNA Length = 631 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggaggaggtcgacaaggtgg 20 |||||||||||||||||||| Sbjct: 223 ggaggaggtcgacaaggtgg 242
>gb|AC098565.3| Oryza sativa chromosome 10 clone OSJNBa0028C16, complete sequence Length = 166757 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcgtcaacctcgtccgctcc 58 |||||||||||||||||||| Sbjct: 111010 tcgtcaacctcgtccgctcc 111029 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcgtcaacctcgtccgctcc 58 |||||||||||||||||||| Sbjct: 102121 tcgtcaacctcgtccgctcc 102140
>gb|AC175781.3| Cavia porcellus clone CH234-402D11, complete sequence Length = 183894 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 cctccttttctcctctcttc 550 |||||||||||||||||||| Sbjct: 48131 cctccttttctcctctcttc 48112
>gb|DQ337883.1| Uncultured bacterium clone S1m_nirS-22 NirS (nirS) gene, partial cds Length = 410 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 165 ccaaggaaggcaagctcacc 184 |||||||||||||||||||| Sbjct: 173 ccaaggaaggcaagctcacc 192
>gb|DQ337869.1| Uncultured bacterium clone Psedi_nirS-41 NirS (nirS) gene, partial cds Length = 413 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 caccaaggaaggcaagctca 182 |||||||||||||||||||| Sbjct: 171 caccaaggaaggcaagctca 190
>gb|DQ337840.1| Uncultured bacterium clone P1m_nirS-15 NirS (nirS) gene, partial cds Length = 413 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 163 caccaaggaaggcaagctca 182 |||||||||||||||||||| Sbjct: 171 caccaaggaaggcaagctca 190
>gb|AC122754.13| Mus musculus chromosome 1, clone RP24-510K10, complete sequence Length = 227950 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 taactctttgcctccttttc 540 |||||||||||||||||||| Sbjct: 105468 taactctttgcctccttttc 105449
>gb|AC157870.3| Loxodonta africana clone VMRC15-210D1, complete sequence Length = 123158 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 160 caccaccaaggaaggcaagc 179 |||||||||||||||||||| Sbjct: 49342 caccaccaaggaaggcaagc 49361
>gb|AC012336.9|AC012336 Homo sapiens chromosome 17, clone CTD-2236G12, complete sequence Length = 40405 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 cctccttttctcctctcttc 550 |||||||||||||||||||| Sbjct: 10151 cctccttttctcctctcttc 10132
>dbj|AK043901.1| Mus musculus 10 days neonate cortex cDNA, RIKEN full-length enriched library, clone:A830048L15 product:unclassifiable, full insert sequence Length = 1373 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 ctttgcctccttttctcctctctt 549 ||||||||||| |||||||||||| Sbjct: 706 ctttgcctcctcttctcctctctt 729
>gb|BT022499.1| Drosophila melanogaster IP07925 full insert cDNA Length = 883 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggaggaggtcgacaaggtgg 20 |||||||||||||||||||| Sbjct: 87 ggaggaggtcgacaaggtgg 106
>dbj|AP008218.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 12, complete sequence Length = 27566993 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcgtcaacctcgtccgctcc 58 |||||||||||||||||||| Sbjct: 15989155 tcgtcaacctcgtccgctcc 15989174
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcgtcaacctcgtccgctcc 58 |||||||||||||||||||| Sbjct: 3141378 tcgtcaacctcgtccgctcc 3141397 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcgtcaacctcgtccgctcc 58 |||||||||||||||||||| Sbjct: 3132489 tcgtcaacctcgtccgctcc 3132508
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 ccttttctcctctcttctag 553 |||||||||||||||||||| Sbjct: 20600937 ccttttctcctctcttctag 20600956
>dbj|BA000036.3| Corynebacterium glutamicum ATCC 13032 DNA, complete genome Length = 3309401 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 194 gagaagatcaagatcgagat 213 |||||||||||||||||||| Sbjct: 1229224 gagaagatcaagatcgagat 1229205
>gb|AC105916.4| Homo sapiens BAC clone RP11-180A12 from 4, complete sequence Length = 104269 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 490 cctccctgggctgagctgcc 509 |||||||||||||||||||| Sbjct: 81874 cctccctgggctgagctgcc 81855
>emb|AL929073.19| Mouse DNA sequence from clone RP23-125D6 on chromosome 4, complete sequence Length = 129246 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 531 cctccttttctcctctcttc 550 |||||||||||||||||||| Sbjct: 16760 cctccttttctcctctcttc 16741
>dbj|AP005611.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0051E21 Length = 137959 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 534 ccttttctcctctcttctag 553 |||||||||||||||||||| Sbjct: 96495 ccttttctcctctcttctag 96514
>gb|CP000086.1| Burkholderia thailandensis E264 chromosome I, complete sequence Length = 3809201 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 193 cgagaagatcaagatcgaga 212 |||||||||||||||||||| Sbjct: 1065643 cgagaagatcaagatcgaga 1065662
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcgtcaacctcgtccgctcc 58 |||||||||||||||||||| Sbjct: 3141299 tcgtcaacctcgtccgctcc 3141318 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcgtcaacctcgtccgctcc 58 |||||||||||||||||||| Sbjct: 3132410 tcgtcaacctcgtccgctcc 3132429
>gb|DP000011.1| Oryza sativa (japonica cultivar-group) chromosome 12, complete sequence Length = 27492551 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcgtcaacctcgtccgctcc 58 |||||||||||||||||||| Sbjct: 15942388 tcgtcaacctcgtccgctcc 15942407
>emb|AL772415.6|CNS08C9T Oryza sativa chromosome 12, . BAC OSJNBa0060H23 of library OSJNBa from chromosome 12 of cultivar Nipponbare of ssp. japonica of Oryza sativa (rice), complete sequence Length = 153350 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 39 tcgtcaacctcgtccgctcc 58 |||||||||||||||||||| Sbjct: 56568 tcgtcaacctcgtccgctcc 56587
>gb|AC154142.24| Mus musculus chromosome 1, clone RP23-187M7, complete sequence Length = 237824 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 521 taactctttgcctccttttc 540 |||||||||||||||||||| Sbjct: 188372 taactctttgcctccttttc 188353
>emb|AL845291.5| Mouse DNA sequence from clone RP23-1O11 on chromosome 2, complete sequence Length = 209914 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 ctttgcctccttttctcctctctt 549 ||||||||||| |||||||||||| Sbjct: 178356 ctttgcctcctcttctcctctctt 178379
>gb|L22959.1|DRORPS18A Drosophila melanogaster ribosomal protein S18 mRNA, complete cds Length = 567 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Plus Query: 1 ggaggaggtcgacaaggtgg 20 |||||||||||||||||||| Sbjct: 183 ggaggaggtcgacaaggtgg 202
>dbj|AB032374.1| Mus musculus gene for Tbr1, 5' flanking region Length = 4570 Score = 40.1 bits (20), Expect = 8.2 Identities = 23/24 (95%) Strand = Plus / Plus Query: 526 ctttgcctccttttctcctctctt 549 ||||||||||| |||||||||||| Sbjct: 3882 ctttgcctcctcttctcctctctt 3905
>dbj|AB015309.1| Acidovorax sp. TP4 gene for PHB depolymerase, complete cds Length = 3846 Score = 40.1 bits (20), Expect = 8.2 Identities = 20/20 (100%) Strand = Plus / Minus Query: 350 agcgccatgagcagcgccac 369 |||||||||||||||||||| Sbjct: 2313 agcgccatgagcagcgccac 2294 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,510,718 Number of Sequences: 3902068 Number of extensions: 4510718 Number of successful extensions: 101349 Number of sequences better than 10.0: 87 Number of HSP's better than 10.0 without gapping: 86 Number of HSP's successfully gapped in prelim test: 1 Number of HSP's that attempted gapping in prelim test: 100320 Number of HSP's gapped (non-prelim): 1028 length of query: 603 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 580 effective length of database: 17,143,297,704 effective search space: 9943112668320 effective search space used: 9943112668320 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)