ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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| Clone Name | baal30m24 |
|---|---|
| Clone Library Name | barley_pub |
>gb|BT016584.1| Zea mays clone Contig417 mRNA sequence Length = 1300 Score = 486 bits (245), Expect = e-134 Identities = 467/541 (86%) Strand = Plus / Plus Query: 17 cgatacgagtccctgcgccactgcaagtgggttgatgaggtcattcctgatgccccctgg 76 |||||||| |||||||| ||||||||||||||||||||||||||||||||||| || ||| Sbjct: 376 cgatacgaatccctgcggcactgcaagtgggttgatgaggtcattcctgatgcaccgtgg 435 Query: 77 gttctcacgccagaattcattgagaagcatcagattgattatgtcgcacatgatgctttg 136 |||||||| | || || ||||| |||||||||||||| ||||| || |||||||| || Sbjct: 436 gttctcacacaggagtttattgataagcatcagattgactatgttgctcatgatgcgctg 495 Query: 137 ccttatgctgatacaagcggtgcttcaaatgacgtctatgagtttgtcaagaagattgga 196 |||||||||||||| ||||| | ||||||| |||||||| ||||| || ||||||||| Sbjct: 496 ccttatgctgatactagcggaacagcaaatgatgtctatgaatttgttaaaaagattgga 555 Query: 197 aaattcaaggaaacaaaaaggactgatggagtatcgacatcggacctcataatgaggata 256 ||||||||||||||||||||||| || || || || || || || |||||||||||||| Sbjct: 556 aaattcaaggaaacaaaaaggacagacggggtttctacttcagatctcataatgaggatc 615 Query: 257 gtgaaggattacaaccagtatgtcatgaggaatttagcacgaggttactcaaggaaagat 316 ||||||| || ||||||||||||||||||||||||||||| || ||||| ||||||||| Sbjct: 616 ttgaaggactataaccagtatgtcatgaggaatttagcacggggctactcgaggaaagat 675 Query: 317 atgggcgtgagctatgttaaggagaaacaactgcaagtgaatatgaagatcaataaactg 376 | || ||||||||||| |||||||||||| ||||||| ||||||||||||||||||||| Sbjct: 676 cttggtgtgagctatgtcaaggagaaacaattgcaagttaatatgaagatcaataaactg 735 Query: 377 cgggagactgtgaaggcgcagcaagaaaagttgcaaacggtggcgaagacggctgggata 436 ||||||||||||||||| || || |||||||||||||| ||||| ||||| ||||| | Sbjct: 736 cgggagactgtgaaggcacatcaggaaaagttgcaaacagtggcaaagactgctggtttg 795 Query: 437 aaccacgaagagtggctggcgaacgcggatcgctgggtggcgggcttcctggagaagttc 496 || || ||||| ||||| || || |||||||||||||| || || ||||| |||||||| Sbjct: 796 aatcatgaagaatggcttgctaatgcggatcgctgggttgctggtttcctagagaagttt 855 Query: 497 gaggagcactgccacgtcatggagactgccatcaaggaccggatacaggagaggctgggg 556 ||| | ||||||||| ||||| ||||| |||||||| ||||||||||||||||| ||| Sbjct: 856 gagcaacactgccacaatatggaaactgcgatcaaggatcggatacaggagaggctaggg 915 Query: 557 a 557 | Sbjct: 916 a 916
>ref|NM_197904.1| Oryza sativa (japonica cultivar-group) putative cholinephosphate cytidylyltransferase (OSJNBa0056G17.15), mRNA Length = 995 Score = 478 bits (241), Expect = e-131 Identities = 448/517 (86%) Strand = Plus / Plus Query: 17 cgatacgagtccctgcgccactgcaagtgggttgatgaggtcattcctgatgccccctgg 76 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 399 cgatacgagtcccttcgccactgcaaatgggttgatgaggtcattcctgatgctccatgg 458 Query: 77 gttctcacgccagaattcattgagaagcatcagattgattatgtcgcacatgatgctttg 136 || ||||||| ||| |||||||| || ||||||||||| ||||| || |||||||| || Sbjct: 459 gtcctcacgcaagagttcattgacaaacatcagattgactatgttgctcatgatgcactg 518 Query: 137 ccttatgctgatacaagcggtgcttcaaatgacgtctatgagtttgtcaagaagattgga 196 |||||||| ||||| || || ||| | ||||| |||||||| ||||| || |||||||| Sbjct: 519 ccttatgccgatactagtggagctgctaatgatgtctatgaatttgttaaaaagattggc 578 Query: 197 aaattcaaggaaacaaaaaggactgatggagtatcgacatcggacctcataatgaggata 256 |||||||||||||| ||| |||| || || ||||| ||||| |||||||||||||||||| Sbjct: 579 aaattcaaggaaacgaaacggacagacggtgtatccacatcagacctcataatgaggata 638 Query: 257 gtgaaggattacaaccagtatgtcatgaggaatttagcacgaggttactcaaggaaagat 316 ||||||| ||||| |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 639 ttgaaggactacaatcagtatgtcatgaggaatttagcacgtggatacacaaggaaagat 698 Query: 317 atgggcgtgagctatgttaaggagaaacaactgcaagtgaatatgaagatcaataaactg 376 | ||||| |||||||||||||| || ||||| || || || |||||||| ||||||||| Sbjct: 699 ttaggcgtaagctatgttaaggaaaagcaactccaggtcaacatgaagataaataaactg 758 Query: 377 cgggagactgtgaaggcgcagcaagaaaagttgcaaacggtggcgaagacggctgggata 436 || |||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 759 cgagagactgtaaaggcgcatcaagaaaagttgcaaacggtggcgaagacagctggaata 818 Query: 437 aaccacgaagagtggctggcgaacgcggatcgctgggtggcgggcttcctggagaagttc 496 || || ||||| ||| |||| || || ||||||||||| || || ||| |||||||||| Sbjct: 819 aatcatgaagaatggttggccaatgcagatcgctgggttgctggtttcttggagaagttt 878 Query: 497 gaggagcactgccacgtcatggagactgccatcaagg 533 ||||| ||||||||| |||||| ||||||||||||| Sbjct: 879 gaggaacactgccacaacatggaaactgccatcaagg 915
>gb|AF140496.2| Oryza sativa (japonica cultivar-group) cholinephosphate cytidylyltransferase (CPCT) mRNA, complete cds Length = 1464 Score = 478 bits (241), Expect = e-131 Identities = 448/517 (86%) Strand = Plus / Plus Query: 17 cgatacgagtccctgcgccactgcaagtgggttgatgaggtcattcctgatgccccctgg 76 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 423 cgatacgagtcccttcgccactgcaaatgggttgatgaggtcattcctgatgctccatgg 482 Query: 77 gttctcacgccagaattcattgagaagcatcagattgattatgtcgcacatgatgctttg 136 || ||||||| ||| |||||||| || ||||||||||| ||||| || |||||||| || Sbjct: 483 gtcctcacgcaagagttcattgacaaacatcagattgactatgttgctcatgatgcactg 542 Query: 137 ccttatgctgatacaagcggtgcttcaaatgacgtctatgagtttgtcaagaagattgga 196 |||||||| ||||| || || ||| | ||||| |||||||| ||||| || |||||||| Sbjct: 543 ccttatgccgatactagtggagctgctaatgatgtctatgaatttgttaaaaagattggc 602 Query: 197 aaattcaaggaaacaaaaaggactgatggagtatcgacatcggacctcataatgaggata 256 |||||||||||||| ||| |||| || || ||||| ||||| |||||||||||||||||| Sbjct: 603 aaattcaaggaaacgaaacggacagacggtgtatccacatcagacctcataatgaggata 662 Query: 257 gtgaaggattacaaccagtatgtcatgaggaatttagcacgaggttactcaaggaaagat 316 ||||||| ||||| |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 663 ttgaaggactacaatcagtatgtcatgaggaatttagcacgtggatacacaaggaaagat 722 Query: 317 atgggcgtgagctatgttaaggagaaacaactgcaagtgaatatgaagatcaataaactg 376 | ||||| |||||||||||||| || ||||| || || || |||||||| ||||||||| Sbjct: 723 ttaggcgtaagctatgttaaggaaaagcaactccaggtcaacatgaagataaataaactg 782 Query: 377 cgggagactgtgaaggcgcagcaagaaaagttgcaaacggtggcgaagacggctgggata 436 || |||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 783 cgagagactgtaaaggcgcatcaagaaaagttgcaaacggtggcgaagacagctggaata 842 Query: 437 aaccacgaagagtggctggcgaacgcggatcgctgggtggcgggcttcctggagaagttc 496 || || ||||| ||| |||| || || ||||||||||| || || ||| |||||||||| Sbjct: 843 aatcatgaagaatggttggccaatgcagatcgctgggttgctggtttcttggagaagttt 902 Query: 497 gaggagcactgccacgtcatggagactgccatcaagg 533 ||||| ||||||||| |||||| ||||||||||||| Sbjct: 903 gaggaacactgccacaacatggaaactgccatcaagg 939
>dbj|AK073939.1| Oryza sativa (japonica cultivar-group) cDNA clone:J033076F05, full insert sequence Length = 1436 Score = 478 bits (241), Expect = e-131 Identities = 448/517 (86%) Strand = Plus / Plus Query: 17 cgatacgagtccctgcgccactgcaagtgggttgatgaggtcattcctgatgccccctgg 76 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 432 cgatacgagtcccttcgccactgcaaatgggttgatgaggtcattcctgatgctccatgg 491 Query: 77 gttctcacgccagaattcattgagaagcatcagattgattatgtcgcacatgatgctttg 136 || ||||||| ||| |||||||| || ||||||||||| ||||| || |||||||| || Sbjct: 492 gtcctcacgcaagagttcattgacaaacatcagattgactatgttgctcatgatgcactg 551 Query: 137 ccttatgctgatacaagcggtgcttcaaatgacgtctatgagtttgtcaagaagattgga 196 |||||||| ||||| || || ||| | ||||| |||||||| ||||| || |||||||| Sbjct: 552 ccttatgccgatactagtggagctgctaatgatgtctatgaatttgttaaaaagattggc 611 Query: 197 aaattcaaggaaacaaaaaggactgatggagtatcgacatcggacctcataatgaggata 256 |||||||||||||| ||| |||| || || ||||| ||||| |||||||||||||||||| Sbjct: 612 aaattcaaggaaacgaaacggacagacggtgtatccacatcagacctcataatgaggata 671 Query: 257 gtgaaggattacaaccagtatgtcatgaggaatttagcacgaggttactcaaggaaagat 316 ||||||| ||||| |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 672 ttgaaggactacaatcagtatgtcatgaggaatttagcacgtggatacacaaggaaagat 731 Query: 317 atgggcgtgagctatgttaaggagaaacaactgcaagtgaatatgaagatcaataaactg 376 | ||||| |||||||||||||| || ||||| || || || |||||||| ||||||||| Sbjct: 732 ttaggcgtaagctatgttaaggaaaagcaactccaggtcaacatgaagataaataaactg 791 Query: 377 cgggagactgtgaaggcgcagcaagaaaagttgcaaacggtggcgaagacggctgggata 436 || |||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 792 cgagagactgtaaaggcgcatcaagaaaagttgcaaacggtggcgaagacagctggaata 851 Query: 437 aaccacgaagagtggctggcgaacgcggatcgctgggtggcgggcttcctggagaagttc 496 || || ||||| ||| |||| || || ||||||||||| || || ||| |||||||||| Sbjct: 852 aatcatgaagaatggttggccaatgcagatcgctgggttgctggtttcttggagaagttt 911 Query: 497 gaggagcactgccacgtcatggagactgccatcaagg 533 ||||| ||||||||| |||||| ||||||||||||| Sbjct: 912 gaggaacactgccacaacatggaaactgccatcaagg 948
>dbj|AK060631.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-027-A03, full insert sequence Length = 1165 Score = 470 bits (237), Expect = e-129 Identities = 447/517 (86%) Strand = Plus / Plus Query: 17 cgatacgagtccctgcgccactgcaagtgggttgatgaggtcattcctgatgccccctgg 76 |||||||||||||| ||||||||||| |||||||||||||||||||||||||| || ||| Sbjct: 383 cgatacgagtcccttcgccactgcaaatgggttgatgaggtcattcctgatgctccatgg 442 Query: 77 gttctcacgccagaattcattgagaagcatcagattgattatgtcgcacatgatgctttg 136 || ||||||| ||| |||||||| || ||||||||||| ||||| || |||||||| || Sbjct: 443 gtcctcacgcaagagttcattgacaaacatcagattgactatgttgctcatgatgcactg 502 Query: 137 ccttatgctgatacaagcggtgcttcaaatgacgtctatgagtttgtcaagaagattgga 196 |||||||| ||||| || || ||| | ||||| |||||||| ||||| || |||||||| Sbjct: 503 ccttatgccgatactagtggagctgctaatgatgtctatgaatttgttaaaaagattggc 562 Query: 197 aaattcaaggaaacaaaaaggactgatggagtatcgacatcggacctcataatgaggata 256 |||||||||||||| ||| |||| || || ||||| ||||| |||||||||||||||||| Sbjct: 563 aaattcaaggaaacgaaacggacagacggtgtatccacatcagacctcataatgaggata 622 Query: 257 gtgaaggattacaaccagtatgtcatgaggaatttagcacgaggttactcaaggaaagat 316 ||||||| ||||| |||||||||||||||||||||||||| || ||| ||||||||||| Sbjct: 623 ttgaaggactacaatcagtatgtcatgaggaatttagcacgtggatacacaaggaaagat 682 Query: 317 atgggcgtgagctatgttaaggagaaacaactgcaagtgaatatgaagatcaataaactg 376 | ||||| |||||||||||||| || ||||| || || || |||||||| ||||||||| Sbjct: 683 ttaggcgtaagctatgttaaggaaaagcaactccaggtcaacatgaagataaataaactg 742 Query: 377 cgggagactgtgaaggcgcagcaagaaaagttgcaaacggtggcgaagacggctgggata 436 || |||||||| |||||||| ||||||||||||||||||||||||||||| ||||| ||| Sbjct: 743 cgagagactgtaaaggcgcatcaagaaaagttgcaaacggtggcgaagacagctggaata 802 Query: 437 aaccacgaagagtggctggcgaacgcggatcgctgggtggcgggcttcctggagaagttc 496 || || ||| | ||| |||| || || ||||||||||| || || ||| |||||||||| Sbjct: 803 aatcatgaaaaatggttggccaatgcagatcgctgggttgctggtttcttggagaagttt 862 Query: 497 gaggagcactgccacgtcatggagactgccatcaagg 533 ||||| ||||||||| |||||| ||||||||||||| Sbjct: 863 gaggaacactgccacaacatggaaactgccatcaagg 899
>gb|AY112644.1| Zea mays CL24723_1 mRNA sequence Length = 639 Score = 254 bits (128), Expect = 3e-64 Identities = 244/283 (86%) Strand = Plus / Minus Query: 275 tatgtcatgaggaatttagcacgaggttactcaaggaaagatatgggcgtgagctatgtt 334 |||||||||||||||||||| || || ||||| ||||||||| | || ||||||||||| Sbjct: 639 tatgtcatgaggaatttagcncggggctactcgaggaaagatcttggtgtgagctatgtc 580 Query: 335 aaggagaaacaactgcaagtgaatatgaagatcaataaactgcgggagactgtgaaggcg 394 |||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||| Sbjct: 579 aaggagaaacaattgcaagttaatatgaagatcaataaactgcgggagactgtgaaggca 520 Query: 395 cagcaagaaaagttgcaaacggtggcgaagacggctgggataaaccacgaagagtggctg 454 || || |||||||||||||| ||||| ||||| ||||| | || || ||||| ||||| Sbjct: 519 catcaggaaaagttgcaaacagtggcaaagactgctggtttgaatcatgaagaatggctt 460 Query: 455 gcgaacgcggatcgctgggtggcgggcttcctggagaagttcgaggagcactgccacgtc 514 || || |||||||||||||| || || ||||| |||||||| ||| | ||||||||| Sbjct: 459 gctaatgcggatcgctgggttgctggtttcctagagaagtttgagcaacactgccacaat 400 Query: 515 atggagactgccatcaaggaccggatacaggagaggctgggga 557 ||||| ||||| |||||||| ||||||||||||||||| |||| Sbjct: 399 atggaaactgcgatcaaggatcggatacaggagaggctaggga 357
>gb|AC018727.10| Oryza sativa chromosome 10 BAC OSJNBa0056G17 genomic sequence, complete sequence Length = 139999 Score = 165 bits (83), Expect = 2e-37 Identities = 134/151 (88%) Strand = Plus / Minus Query: 188 aagattggaaaattcaaggaaacaaaaaggactgatggagtatcgacatcggacctcata 247 |||||||| |||||||||||||| ||| |||| || || ||||| ||||| ||||||||| Sbjct: 14990 aagattggcaaattcaaggaaacgaaacggacagacggtgtatccacatcagacctcata 14931 Query: 248 atgaggatagtgaaggattacaaccagtatgtcatgaggaatttagcacgaggttactca 307 ||||||||| ||||||| ||||| |||||||||||||||||||||||||| || ||| || Sbjct: 14930 atgaggatattgaaggactacaatcagtatgtcatgaggaatttagcacgtggatacaca 14871 Query: 308 aggaaagatatgggcgtgagctatgttaagg 338 ||||||||| | ||||| ||||||||||||| Sbjct: 14870 aggaaagatttaggcgtaagctatgttaagg 14840 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 44 tgggttgatgaggtcattcctgatgccccctgggttctcacgccagaattcattgagaag 103 |||||||||||||||||||||||||| || ||||| ||||||| ||| |||||||| || Sbjct: 15329 tgggttgatgaggtcattcctgatgctccatgggtcctcacgcaagagttcattgacaaa 15270 Query: 104 catcagattgattatgtcgcacatgatgc 132 ||||||||||| ||||| || |||||||| Sbjct: 15269 catcagattgactatgttgctcatgatgc 15241 Score = 93.7 bits (47), Expect = 6e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 405 agttgcaaacggtggcgaagacggctgggataaaccacgaagagtggctggcgaacgcgg 464 |||||||||||||||||||||| ||||| ||||| || ||||| ||| |||| || || | Sbjct: 14517 agttgcaaacggtggcgaagacagctggaataaatcatgaagaatggttggccaatgcag 14458 Query: 465 atcgctgggtggcgggcttcctggagaagttcgaggagcactgccac 511 |||||||||| || || ||| |||||||||| ||||| ||||||||| Sbjct: 14457 atcgctgggttgctggtttcttggagaagtttgaggaacactgccac 14411 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 359 atgaagatcaataaactgcgggagactgtgaaggcgcagcaagaaaag 406 |||||||| ||||||||||| |||||||| |||||||| ||||||||| Sbjct: 14682 atgaagataaataaactgcgagagactgtaaaggcgcatcaagaaaag 14635 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 17 cgatacgagtccctgcgccactgcaagt 44 |||||||||||||| ||||||||||||| Sbjct: 15830 cgatacgagtcccttcgccactgcaagt 15803
>dbj|AP008216.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 10, complete sequence Length = 22685906 Score = 165 bits (83), Expect = 2e-37 Identities = 134/151 (88%) Strand = Plus / Minus Query: 188 aagattggaaaattcaaggaaacaaaaaggactgatggagtatcgacatcggacctcata 247 |||||||| |||||||||||||| ||| |||| || || ||||| ||||| ||||||||| Sbjct: 22560321 aagattggcaaattcaaggaaacgaaacggacagacggtgtatccacatcagacctcata 22560262 Query: 248 atgaggatagtgaaggattacaaccagtatgtcatgaggaatttagcacgaggttactca 307 ||||||||| ||||||| ||||| |||||||||||||||||||||||||| || ||| || Sbjct: 22560261 atgaggatattgaaggactacaatcagtatgtcatgaggaatttagcacgtggatacaca 22560202 Query: 308 aggaaagatatgggcgtgagctatgttaagg 338 ||||||||| | ||||| ||||||||||||| Sbjct: 22560201 aggaaagatttaggcgtaagctatgttaagg 22560171 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 44 tgggttgatgaggtcattcctgatgccccctgggttctcacgccagaattcattgagaag 103 |||||||||||||||||||||||||| || ||||| ||||||| ||| |||||||| || Sbjct: 22560660 tgggttgatgaggtcattcctgatgctccatgggtcctcacgcaagagttcattgacaaa 22560601 Query: 104 catcagattgattatgtcgcacatgatgc 132 ||||||||||| ||||| || |||||||| Sbjct: 22560600 catcagattgactatgttgctcatgatgc 22560572 Score = 93.7 bits (47), Expect = 6e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 405 agttgcaaacggtggcgaagacggctgggataaaccacgaagagtggctggcgaacgcgg 464 |||||||||||||||||||||| ||||| ||||| || ||||| ||| |||| || || | Sbjct: 22559848 agttgcaaacggtggcgaagacagctggaataaatcatgaagaatggttggccaatgcag 22559789 Query: 465 atcgctgggtggcgggcttcctggagaagttcgaggagcactgccac 511 |||||||||| || || ||| |||||||||| ||||| ||||||||| Sbjct: 22559788 atcgctgggttgctggtttcttggagaagtttgaggaacactgccac 22559742 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 359 atgaagatcaataaactgcgggagactgtgaaggcgcagcaagaaaag 406 |||||||| ||||||||||| |||||||| |||||||| ||||||||| Sbjct: 22560013 atgaagataaataaactgcgagagactgtaaaggcgcatcaagaaaag 22559966 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 17 cgatacgagtccctgcgccactgcaagt 44 |||||||||||||| ||||||||||||| Sbjct: 22561161 cgatacgagtcccttcgccactgcaagt 22561134
>gb|AE016959.3| Oryza sativa (japonica cultivar-group) chromosome 10, complete sequence Length = 22698374 Score = 165 bits (83), Expect = 2e-37 Identities = 134/151 (88%) Strand = Plus / Minus Query: 188 aagattggaaaattcaaggaaacaaaaaggactgatggagtatcgacatcggacctcata 247 |||||||| |||||||||||||| ||| |||| || || ||||| ||||| ||||||||| Sbjct: 22572789 aagattggcaaattcaaggaaacgaaacggacagacggtgtatccacatcagacctcata 22572730 Query: 248 atgaggatagtgaaggattacaaccagtatgtcatgaggaatttagcacgaggttactca 307 ||||||||| ||||||| ||||| |||||||||||||||||||||||||| || ||| || Sbjct: 22572729 atgaggatattgaaggactacaatcagtatgtcatgaggaatttagcacgtggatacaca 22572670 Query: 308 aggaaagatatgggcgtgagctatgttaagg 338 ||||||||| | ||||| ||||||||||||| Sbjct: 22572669 aggaaagatttaggcgtaagctatgttaagg 22572639 Score = 97.6 bits (49), Expect = 4e-17 Identities = 79/89 (88%) Strand = Plus / Minus Query: 44 tgggttgatgaggtcattcctgatgccccctgggttctcacgccagaattcattgagaag 103 |||||||||||||||||||||||||| || ||||| ||||||| ||| |||||||| || Sbjct: 22573128 tgggttgatgaggtcattcctgatgctccatgggtcctcacgcaagagttcattgacaaa 22573069 Query: 104 catcagattgattatgtcgcacatgatgc 132 ||||||||||| ||||| || |||||||| Sbjct: 22573068 catcagattgactatgttgctcatgatgc 22573040 Score = 93.7 bits (47), Expect = 6e-16 Identities = 92/107 (85%) Strand = Plus / Minus Query: 405 agttgcaaacggtggcgaagacggctgggataaaccacgaagagtggctggcgaacgcgg 464 |||||||||||||||||||||| ||||| ||||| || ||||| ||| |||| || || | Sbjct: 22572316 agttgcaaacggtggcgaagacagctggaataaatcatgaagaatggttggccaatgcag 22572257 Query: 465 atcgctgggtggcgggcttcctggagaagttcgaggagcactgccac 511 |||||||||| || || ||| |||||||||| ||||| ||||||||| Sbjct: 22572256 atcgctgggttgctggtttcttggagaagtttgaggaacactgccac 22572210 Score = 63.9 bits (32), Expect = 5e-07 Identities = 44/48 (91%) Strand = Plus / Minus Query: 359 atgaagatcaataaactgcgggagactgtgaaggcgcagcaagaaaag 406 |||||||| ||||||||||| |||||||| |||||||| ||||||||| Sbjct: 22572481 atgaagataaataaactgcgagagactgtaaaggcgcatcaagaaaag 22572434 Score = 48.1 bits (24), Expect = 0.032 Identities = 27/28 (96%) Strand = Plus / Minus Query: 17 cgatacgagtccctgcgccactgcaagt 44 |||||||||||||| ||||||||||||| Sbjct: 22573629 cgatacgagtcccttcgccactgcaagt 22573602
>emb|Y09101.1|PSCHCY P.sativum mRNA for cholinephosphate cytidylyltransferase Length = 1240 Score = 99.6 bits (50), Expect = 1e-17 Identities = 161/198 (81%) Strand = Plus / Plus Query: 14 gaacgatacgagtccctgcgccactgcaagtgggttgatgaggtcattcctgatgccccc 73 ||||| || ||||| || ||||||||||||||||||||||| || ||||| |||| || Sbjct: 313 gaacgctatgagtctcttcgccactgcaagtgggttgatgaagttattccagatgtgcca 372 Query: 74 tgggttctcacgccagaattcattgagaagcatcagattgattatgtcgcacatgatgct 133 ||||| ||| | || |||||||| |||||||| ||||| ||||| || |||||| || Sbjct: 373 tgggtaatcaatcaggagttcattgacaagcatcaaattgactatgtggctcatgattct 432 Query: 134 ttgccttatgctgatacaagcggtgcttcaaatgacgtctatgagtttgtcaagaagatt 193 | ||||||||||||||||| || ||| ||| || |||||||| ||||| ||| ||| Sbjct: 433 cttccttatgctgatacaagtggagctggaaaggatgtctatgaatttgttaaggctatt 492 Query: 194 ggaaaattcaaggaaaca 211 |||||||| ||||||||| Sbjct: 493 ggaaaatttaaggaaaca 510
>gb|BT014268.1| Lycopersicon esculentum clone 133493R, mRNA sequence Length = 1182 Score = 87.7 bits (44), Expect = 4e-14 Identities = 104/124 (83%) Strand = Plus / Plus Query: 30 tgcgccactgcaagtgggttgatgaggtcattcctgatgccccctgggttctcacgccag 89 |||||||||||| ||||||||||| || ||||| ||||| || |||||| | || |||| Sbjct: 321 tgcgccactgcagatgggttgatgaagttattccagatgcgccttgggttgtaaccccag 380 Query: 90 aattcattgagaagcatcagattgattatgtcgcacatgatgctttgccttatgctgata 149 | ||||||||||| |||| |||||| ||||| |||||||| ||| | |||||||| ||| Sbjct: 381 agttcattgagaaacatcggattgactatgtggcacatgacgctcttccttatgcggatg 440 Query: 150 caag 153 |||| Sbjct: 441 caag 444
>ref|NM_128785.2| Arabidopsis thaliana choline-phosphate cytidylyltransferase/ nucleotidyltransferase AT2G32260 mRNA, complete cds Length = 1528 Score = 83.8 bits (42), Expect = 6e-13 Identities = 195/246 (79%) Strand = Plus / Plus Query: 38 tgcaagtgggttgatgaggtcattcctgatgccccctgggttctcacgccagaattcatt 97 ||||||||||| ||||| ||||| |||||||| || ||||| ||| | || || || Sbjct: 421 tgcaagtgggtggatgaagtcatccctgatgcaccatgggtggtcaaccaggagtttctt 480 Query: 98 gagaagcatcagattgattatgtcgcacatgatgctttgccttatgctgatacaagcggt 157 || ||||| |||||||| ||||| || || ||| || | || ||||||||| ||||||| Sbjct: 481 gacaagcaccagattgactatgttgcccacgattctcttccctatgctgattcaagcgga 540 Query: 158 gcttcaaatgacgtctatgagtttgtcaagaagattggaaaattcaaggaaacaaaaagg 217 ||| ||| || |||||||| ||||| ||||| |||| | || ||||||||| | | Sbjct: 541 gctggaaaggatgtctatgaatttgttaagaaagttgggaggtttaaggaaacacagcga 600 Query: 218 actgatggagtatcgacatcggacctcataatgaggatagtgaaggattacaaccagtat 277 ||||| ||| ||||||| ||||| | |||||||| |||||||| |||||||| |||||| Sbjct: 601 actgaaggaatatcgacctcggatataataatgagaatagtgaaagattacaatcagtat 660 Query: 278 gtcatg 283 |||||| Sbjct: 661 gtcatg 666
>gb|BT000207.1| Arabidopsis thaliana putative phospholipid cytidylyltransferase (At2g32260) mRNA, complete cds Length = 1314 Score = 83.8 bits (42), Expect = 6e-13 Identities = 195/246 (79%) Strand = Plus / Plus Query: 38 tgcaagtgggttgatgaggtcattcctgatgccccctgggttctcacgccagaattcatt 97 ||||||||||| ||||| ||||| |||||||| || ||||| ||| | || || || Sbjct: 292 tgcaagtgggtggatgaagtcatccctgatgcaccatgggtggtcaaccaggagtttctt 351 Query: 98 gagaagcatcagattgattatgtcgcacatgatgctttgccttatgctgatacaagcggt 157 || ||||| |||||||| ||||| || || ||| || | || ||||||||| ||||||| Sbjct: 352 gacaagcaccagattgactatgttgcccacgattctcttccctatgctgattcaagcgga 411 Query: 158 gcttcaaatgacgtctatgagtttgtcaagaagattggaaaattcaaggaaacaaaaagg 217 ||| ||| || |||||||| ||||| ||||| |||| | || ||||||||| | | Sbjct: 412 gctggaaaggatgtctatgaatttgttaagaaagttgggaggtttaaggaaacacagcga 471 Query: 218 actgatggagtatcgacatcggacctcataatgaggatagtgaaggattacaaccagtat 277 ||||| ||| ||||||| ||||| | |||||||| |||||||| |||||||| |||||| Sbjct: 472 actgaaggaatatcgacctcggatataataatgagaatagtgaaagattacaatcagtat 531 Query: 278 gtcatg 283 |||||| Sbjct: 532 gtcatg 537
>gb|AY136393.1| Arabidopsis thaliana putative phospholipid cytidylyltransferase (At2g32260) mRNA, complete cds Length = 1520 Score = 83.8 bits (42), Expect = 6e-13 Identities = 195/246 (79%) Strand = Plus / Plus Query: 38 tgcaagtgggttgatgaggtcattcctgatgccccctgggttctcacgccagaattcatt 97 ||||||||||| ||||| ||||| |||||||| || ||||| ||| | || || || Sbjct: 413 tgcaagtgggtggatgaagtcatccctgatgcaccatgggtggtcaaccaggagtttctt 472 Query: 98 gagaagcatcagattgattatgtcgcacatgatgctttgccttatgctgatacaagcggt 157 || ||||| |||||||| ||||| || || ||| || | || ||||||||| ||||||| Sbjct: 473 gacaagcaccagattgactatgttgcccacgattctcttccctatgctgattcaagcgga 532 Query: 158 gcttcaaatgacgtctatgagtttgtcaagaagattggaaaattcaaggaaacaaaaagg 217 ||| ||| || |||||||| ||||| ||||| |||| | || ||||||||| | | Sbjct: 533 gctggaaaggatgtctatgaatttgttaagaaagttgggaggtttaaggaaacacagcga 592 Query: 218 actgatggagtatcgacatcggacctcataatgaggatagtgaaggattacaaccagtat 277 ||||| ||| ||||||| ||||| | |||||||| |||||||| |||||||| |||||| Sbjct: 593 actgaaggaatatcgacctcggatataataatgagaatagtgaaagattacaatcagtat 652 Query: 278 gtcatg 283 |||||| Sbjct: 653 gtcatg 658
>emb|BX820129.1|CNS0A8JJ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS78ZC10 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1361 Score = 83.8 bits (42), Expect = 6e-13 Identities = 195/246 (79%) Strand = Plus / Plus Query: 38 tgcaagtgggttgatgaggtcattcctgatgccccctgggttctcacgccagaattcatt 97 ||||||||||| ||||| ||||| |||||||| || ||||| ||| | || || || Sbjct: 366 tgcaagtgggtggatgaagtcatccctgatgcaccatgggtggtcaaccaggagtttctt 425 Query: 98 gagaagcatcagattgattatgtcgcacatgatgctttgccttatgctgatacaagcggt 157 || ||||| |||||||| ||||| || || ||| || | || ||||||||| ||||||| Sbjct: 426 gacaagcaccagattgactatgttgcccacgattctcttccctatgctgattcaagcgga 485 Query: 158 gcttcaaatgacgtctatgagtttgtcaagaagattggaaaattcaaggaaacaaaaagg 217 ||| ||| || |||||||| ||||| ||||| |||| | || ||||||||| | | Sbjct: 486 gctggaaaggatgtctatgaatttgttaagaaagttgggaggtttaaggaaacacagcga 545 Query: 218 actgatggagtatcgacatcggacctcataatgaggatagtgaaggattacaaccagtat 277 ||||| ||| ||||||| ||||| | |||||||| |||||||| |||||||| |||||| Sbjct: 546 actgaaggaatatcgacctcggatataataatgagaatagtgaaagattacaatcagtat 605 Query: 278 gtcatg 283 |||||| Sbjct: 606 gtcatg 611
>ref|NM_117602.3| Arabidopsis thaliana choline-phosphate cytidylyltransferase/ nucleotidyltransferase AT4G15130 mRNA, complete cds Length = 1281 Score = 77.8 bits (39), Expect = 4e-11 Identities = 207/263 (78%) Strand = Plus / Plus Query: 17 cgatacgagtccctgcgccactgcaagtgggttgatgaggtcattcctgatgccccctgg 76 |||||||| || || || || ||||||||||||||||| || ||||| ||||| || ||| Sbjct: 353 cgatacgaatctcttcgacattgcaagtgggttgatgaagtgattccagatgcaccatgg 412 Query: 77 gttctcacgccagaattcattgagaagcatcagattgattatgtcgcacatgatgctttg 136 ||||| || |||| || |||| |||||| |||| ||||| || || || |||||| | Sbjct: 413 gttcttacaacagagtttcttgataagcataagatagattacgtagctcacgatgctctt 472 Query: 137 ccttatgctgatacaagcggtgcttcaaatgacgtctatgagtttgtcaagaagattgga 196 || ||||| ||||| || || ||| |||||| || ||||||||||| ||| |||||| Sbjct: 473 ccctatgcggatactagtggagctggaaatgatgtttatgagtttgtaaagtcgattggg 532 Query: 197 aaattcaaggaaacaaaaaggactgatggagtatcgacatcggacctcataatgaggata 256 || || ||||| || ||| | || || || |||||||||| || | || ||||| ||| Sbjct: 533 aagtttaaggagactaaacgaacagaggggatatcgacatctgatataatcatgagaata 592 Query: 257 gtgaaggattacaaccagtatgt 279 ||||| ||||| ||||||||||| Sbjct: 593 gtgaaagattataaccagtatgt 615
>emb|BX819879.1|CNS0A8JZ Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTLS41ZE12 of Adult vegetative tissue of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1267 Score = 77.8 bits (39), Expect = 4e-11 Identities = 196/247 (79%), Gaps = 1/247 (0%) Strand = Plus / Plus Query: 38 tgcaagtgggttgatgaggtcattcctgatgccccctgggttctcacgccagaattcatt 97 ||||||||||| ||||| ||||| |||||||| || ||||| ||| | || || || Sbjct: 393 tgcaagtgggtggatgaagtcatccctgatgcaccatgggtggtcaaccaggagtttctt 452 Query: 98 gagaagcatcagattgattatgtcgcacatgatgctttgccttatgctgatacaagcggt 157 || ||||| |||||||| ||||| || || ||| || | || ||||||||| ||||||| Sbjct: 453 gacaagcaccagattgactatgttgcccacgattctcttccctatgctgattcaagcgga 512 Query: 158 gcttcaaatgacgtctatgagtttgtcaagaaga-ttggaaaattcaaggaaacaaaaag 216 ||| ||| || |||||||| ||||| ||||| | |||| | || ||||||||| | | Sbjct: 513 gctggaaaggatgtctatgaatttgttaagaaaagttgggaggtttaaggaaacacagcg 572 Query: 217 gactgatggagtatcgacatcggacctcataatgaggatagtgaaggattacaaccagta 276 ||||| ||| ||||||| ||||| | |||||||| |||||||| |||||||| ||||| Sbjct: 573 aactgaaggaatatcgacctcggatataataatgagaatagtgaaagattacaatcagta 632 Query: 277 tgtcatg 283 ||||||| Sbjct: 633 tgtcatg 639
>dbj|AB056716.1| Arabidopsis thaliana AtCCT2 mRNA for CTP:phosphorylcholine cytidylyltransferase, complete cds Length = 1238 Score = 77.8 bits (39), Expect = 4e-11 Identities = 207/263 (78%) Strand = Plus / Plus Query: 17 cgatacgagtccctgcgccactgcaagtgggttgatgaggtcattcctgatgccccctgg 76 |||||||| || || || || ||||||||||||||||| || ||||| ||||| || ||| Sbjct: 353 cgatacgaatctcttcgacattgcaagtgggttgatgaagtgattccagatgcaccatgg 412 Query: 77 gttctcacgccagaattcattgagaagcatcagattgattatgtcgcacatgatgctttg 136 ||||| || |||| || |||| |||||| |||| ||||| || || || |||||| | Sbjct: 413 gttcttacaacagagtttcttgataagcataagatagattacgtagctcacgatgctctt 472 Query: 137 ccttatgctgatacaagcggtgcttcaaatgacgtctatgagtttgtcaagaagattgga 196 || ||||| ||||| || || ||| |||||| || ||||||||||| ||| |||||| Sbjct: 473 ccctatgcggatactagtggagctggaaatgatgtttatgagtttgtaaagtcgattggg 532 Query: 197 aaattcaaggaaacaaaaaggactgatggagtatcgacatcggacctcataatgaggata 256 || || ||||| || ||| | || || || |||||||||| || | || ||||| ||| Sbjct: 533 aagtttaaggagactaaacgaacagaggggatatcgacatctgatataatcatgagaata 592 Query: 257 gtgaaggattacaaccagtatgt 279 ||||| ||||| ||||||||||| Sbjct: 593 gtgaaagattataaccagtatgt 615
>gb|AF330161.1| Rosa hybrid cultivar 'Vivaldi' phosphocholine cytidylyltransferase mRNA, partial cds Length = 440 Score = 71.9 bits (36), Expect = 2e-09 Identities = 195/248 (78%) Strand = Plus / Plus Query: 32 cgccactgcaagtgggttgatgaggtcattcctgatgccccctgggttctcacgccagaa 91 ||||| ||||||||||| ||||| |||||||||||||| || ||||| ||| |||| Sbjct: 68 cgccattgcaagtgggtggatgaagtcattcctgatgcaccttgggtggtcaatgaagaa 127 Query: 92 ttcattgagaagcatcagattgattatgtcgcacatgatgctttgccttatgctgataca 151 || |||| |||||| | ||||| ||||| || ||||| || | |||||||||||| | Sbjct: 128 tttcttgacaagcataatattgactatgtagcccatgactctctcccttatgctgatgct 187 Query: 152 agcggtgcttcaaatgacgtctatgagtttgtcaagaagattggaaaattcaaggaaaca 211 || || ||| ||| || || ||||| |||||||| |||| | || ||||| ||| Sbjct: 188 agtggagctggaaaggatgtatatgaatttgtcaaagccgttggcaggtttaaggagaca 247 Query: 212 aaaaggactgatggagtatcgacatcggacctcataatgaggatagtgaaggattacaac 271 ||| | ||||| || |||||||||||||| | ||||||||||| || |||||||| ||| Sbjct: 248 aaacgaactgaggggatatcgacatcggacattataatgaggattgtaaaggattataac 307 Query: 272 cagtatgt 279 |||||||| Sbjct: 308 cagtatgt 315
>ref|XM_464309.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1370 Score = 63.9 bits (32), Expect = 5e-07 Identities = 140/176 (79%) Strand = Plus / Plus Query: 35 cactgcaagtgggttgatgaggtcattcctgatgccccctgggttctcacgccagaattc 94 |||||||||||||| ||||| |||||||||||||| || ||||| | ||| ||||||| Sbjct: 446 cactgcaagtgggtggatgaagtcattcctgatgctccatgggtggtaacggaagaattc 505 Query: 95 attgagaagcatcagattgattatgtcgcacatgatgctttgccttatgctgatacaagc 154 | | || ||| | ||||||| ||| ||||||||| || |||| ||||||||| | || Sbjct: 506 ttgaataaacataacattgattttgttgcacatgattctctgccgtatgctgatgctagt 565 Query: 155 ggtgcttcaaatgacgtctatgagtttgtcaagaagattggaaaattcaaggaaac 210 || ||| || || |||||||| |||||||| || |||| ||||| |||||||| Sbjct: 566 ggagctggtaacgatgtctatgaatttgtcaaaaaacttggtaaatttaaggaaac 621
>dbj|AK070565.1| Oryza sativa (japonica cultivar-group) cDNA clone:J023056M07, full insert sequence Length = 1370 Score = 63.9 bits (32), Expect = 5e-07 Identities = 140/176 (79%) Strand = Plus / Plus Query: 35 cactgcaagtgggttgatgaggtcattcctgatgccccctgggttctcacgccagaattc 94 |||||||||||||| ||||| |||||||||||||| || ||||| | ||| ||||||| Sbjct: 446 cactgcaagtgggtggatgaagtcattcctgatgctccatgggtggtaacggaagaattc 505 Query: 95 attgagaagcatcagattgattatgtcgcacatgatgctttgccttatgctgatacaagc 154 | | || ||| | ||||||| ||| ||||||||| || |||| ||||||||| | || Sbjct: 506 ttgaataaacataacattgattttgttgcacatgattctctgccgtatgctgatgctagt 565 Query: 155 ggtgcttcaaatgacgtctatgagtttgtcaagaagattggaaaattcaaggaaac 210 || ||| || || |||||||| |||||||| || |||| ||||| |||||||| Sbjct: 566 ggagctggtaacgatgtctatgaatttgtcaaaaaacttggtaaatttaaggaaac 621
>gb|AC005700.3| Arabidopsis thaliana chromosome 2 clone T32F6 map TEn5, complete sequence Length = 100424 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Minus Query: 218 actgatggagtatcgacatcggacctcataatgaggatagtgaaggattacaaccagtat 277 ||||| ||| ||||||| ||||| | |||||||| |||||||| |||||||| |||||| Sbjct: 89352 actgaaggaatatcgacctcggatataataatgagaatagtgaaagattacaatcagtat 89293 Query: 278 gtcatg 283 |||||| Sbjct: 89292 gtcatg 89287
>emb|BX820402.1|CNS0A8Q8 Arabidopsis thaliana Full-length cDNA Complete sequence from clone GSLTPGH29ZH09 of Hormone Treated Callus of strain col-0 of Arabidopsis thaliana (thale cress) Length = 1336 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 218 actgatggagtatcgacatcggacctcataatgaggatagtgaaggattacaaccagtat 277 ||||| ||| ||||||| ||||| | |||||||| |||||||| |||||||| |||||| Sbjct: 597 actgaaggaatatcgacctcggatataataatgagaatagtgaaagattacaatcagtat 656 Query: 278 gtcatg 283 |||||| Sbjct: 657 gtcatg 662
>gb|AF165912.1|AF165912 Arabidopsis thaliana CTP:phosphocholine cytidylyltransferase (CCT) gene, complete cds Length = 5485 Score = 60.0 bits (30), Expect = 8e-06 Identities = 57/66 (86%) Strand = Plus / Plus Query: 218 actgatggagtatcgacatcggacctcataatgaggatagtgaaggattacaaccagtat 277 ||||| ||| ||||||| ||||| | |||||||| |||||||| |||||||| |||||| Sbjct: 2954 actgaaggaatatcgacctcggatataataatgagaatagtgaaagattacaatcagtat 3013 Query: 278 gtcatg 283 |||||| Sbjct: 3014 gtcatg 3019
>gb|U50451.1|ATU50451 Arabidopsis thaliana CTP:phsophocholine cytidylyltransferase gene, complete cds Length = 1447 Score = 60.0 bits (30), Expect = 8e-06 Identities = 192/246 (78%) Strand = Plus / Plus Query: 38 tgcaagtgggttgatgaggtcattcctgatgccccctgggttctcacgccagaattcatt 97 ||||||||||| ||||| ||||| |||||||| || ||||| ||| | || || || Sbjct: 399 tgcaagtgggtggatgaagtcatccctgatgcaccatgggtggtcaaccaggagtttctt 458 Query: 98 gagaagcatcagattgattatgtcgcacatgatgctttgccttatgctgatacaagcggt 157 || ||||| |||||||| ||||| || || ||| || | || |||||| || ||||||| Sbjct: 459 gacaagcaccagattgactatgttgcccacgattctcttccctatgctcattcaagcgga 518 Query: 158 gcttcaaatgacgtctatgagtttgtcaagaagattggaaaattcaaggaaacaaaaagg 217 | ||| || |||||||| ||||| ||||| |||| | || ||||||||| | | Sbjct: 519 cgtggaaaggatgtctatgaatttgttaagaaagttgggaggtttaaggaaacacagcga 578 Query: 218 actgatggagtatcgacatcggacctcataatgaggatagtgaaggattacaaccagtat 277 ||||| ||| ||||||| ||||| | |||||||| |||||||| |||||||| |||||| Sbjct: 579 actgaaggaatatcgacctcggatataataatgagaatagtgaaagattacaatcagtat 638 Query: 278 gtcatg 283 |||||| Sbjct: 639 gtcatg 644
>ref|XM_747203.1| Aspergillus fumigatus Af293 cholinephosphate cytidylyltransferase (Afu1g09290) partial mRNA Length = 1455 Score = 56.0 bits (28), Expect = 1e-04 Identities = 37/40 (92%) Strand = Plus / Plus Query: 92 ttcattgagaagcatcagattgattatgtcgcacatgatg 131 |||||||||||||||||||| |||||||| || ||||||| Sbjct: 748 ttcattgagaagcatcagatcgattatgttgctcatgatg 787
>dbj|D63168.1|BNACCTB Brassica napus mRNA for CTP:phosphocholine cytidylyltransferase, complete cds Length = 1196 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 245 ataatgaggatagtgaaggattacaaccagtatgtcatg 283 ||||||||||||||||| ||||| || |||||||||||| Sbjct: 513 ataatgaggatagtgaaagattataatcagtatgtcatg 551
>dbj|D63167.1|BNACCTA Brassica napus mRNA for CTP:phosphocholine cytidylyltransferase, complete cds Length = 1099 Score = 54.0 bits (27), Expect = 5e-04 Identities = 36/39 (92%) Strand = Plus / Plus Query: 245 ataatgaggatagtgaaggattacaaccagtatgtcatg 283 ||||||||||||||||| ||||| || |||||||||||| Sbjct: 483 ataatgaggatagtgaaagattataatcagtatgtcatg 521
>gb|AY105501.1| Zea mays PCO142408 mRNA sequence Length = 1374 Score = 52.0 bits (26), Expect = 0.002 Identities = 53/62 (85%) Strand = Plus / Plus Query: 17 cgatacgagtccctgcgccactgcaagtgggttgatgaggtcattcctgatgccccctgg 76 ||||| ||||| || || || ||||||||||||||||| |||||||| ||||| || ||| Sbjct: 400 cgatatgagtcacttcgtcattgcaagtgggttgatgaagtcattccagatgctccatgg 459 Query: 77 gt 78 || Sbjct: 460 gt 461
>dbj|D58404.1| Brassica napus mRNA for CTP:phosphocholine cytidylyltransferase, complete cds Length = 1382 Score = 48.1 bits (24), Expect = 0.032 Identities = 45/52 (86%) Strand = Plus / Plus Query: 228 tatcgacatcggacctcataatgaggatagtgaaggattacaaccagtatgt 279 ||||||| |||||| | || ||||| |||||||| ||||| ||||||||||| Sbjct: 512 tatcgacctcggacattatcatgagaatagtgaaagattataaccagtatgt 563 Score = 48.1 bits (24), Expect = 0.032 Identities = 39/44 (88%) Strand = Plus / Plus Query: 35 cactgcaagtgggttgatgaggtcattcctgatgccccctgggt 78 |||||||||||||| ||||| |||||||| ||||| || ||||| Sbjct: 319 cactgcaagtgggtggatgaagtcattcccgatgcaccgtgggt 362
>gb|AC022150.6| Homo sapiens chromosome 19 clone CTD-3099C6, complete sequence Length = 228156 Score = 46.1 bits (23), Expect = 0.13 Identities = 26/27 (96%) Strand = Plus / Minus Query: 421 gaagacggctgggataaaccacgaaga 447 ||||||||||||| ||||||||||||| Sbjct: 17250 gaagacggctgggctaaaccacgaaga 17224
>ref|XM_955695.1| Neurospora crassa OR74A hypothetical protein (NCU08966.1) partial mRNA Length = 3666 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 554 gggaggcaggccggcaaaggca 575 |||||||||||||||||||||| Sbjct: 285 gggaggcaggccggcaaaggca 264
>ref|XM_331357.1| Neurospora crassa OR74A hypothetical protein (NCU08966.1) partial mRNA Length = 3666 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 554 gggaggcaggccggcaaaggca 575 |||||||||||||||||||||| Sbjct: 285 gggaggcaggccggcaaaggca 264
>gb|AC109253.9| Mus musculus, clone RP23-351D8, complete sequence Length = 254578 Score = 44.1 bits (22), Expect = 0.50 Identities = 22/22 (100%) Strand = Plus / Minus Query: 544 ggagaggctggggaggcaggcc 565 |||||||||||||||||||||| Sbjct: 29583 ggagaggctggggaggcaggcc 29562
>gb|AC131248.14| Medicago truncatula clone mth2-28n22, complete sequence Length = 136333 Score = 44.1 bits (22), Expect = 0.50 Identities = 37/42 (88%) Strand = Plus / Plus Query: 92 ttcattgagaagcatcagattgattatgtcgcacatgatgct 133 |||||||| |||||| | ||||| ||||| |||||||||||| Sbjct: 83424 ttcattgacaagcataaaattgactatgtggcacatgatgct 83465 Score = 42.1 bits (21), Expect = 2.0 Identities = 39/45 (86%) Strand = Plus / Plus Query: 139 ttatgctgatacaagcggtgcttcaaatgacgtctatgagtttgt 183 ||||||||||||||| || ||| |||||| |||||||| ||||| Sbjct: 84605 ttatgctgatacaagtggagctggaaatgatgtctatgaatttgt 84649
>ref|XM_472231.1| Oryza sativa (japonica cultivar-group), predicted mRNA Length = 579 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tcctggagaagttcgaggagc 503 ||||||||||||||||||||| Sbjct: 371 tcctggagaagttcgaggagc 351
>gb|CP000069.1| Trypanosoma brucei chromosome 6, complete sequence Length = 1618915 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 tgacgtctatgagtttgtcaagaag 190 ||||||||||||||| ||||||||| Sbjct: 675054 tgacgtctatgagttcgtcaagaag 675030
>gb|AC074259.14| Trypanosoma brucei chromosome 6 clone RPCI93-4M18, complete sequence Length = 160865 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Minus Query: 166 tgacgtctatgagtttgtcaagaag 190 ||||||||||||||| ||||||||| Sbjct: 33630 tgacgtctatgagttcgtcaagaag 33606
>ref|XM_416550.1| PREDICTED: Gallus gallus similar to KIAA1006 protein (LOC418327), mRNA Length = 5904 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 178 gtttgtcaagaagattggaaa 198 ||||||||||||||||||||| Sbjct: 2881 gtttgtcaagaagattggaaa 2861
>ref|XM_821616.1| Trypanosoma brucei TREU927 clone RPCI93-4M18 hypothetical protein (Tb927.6.2080) partial mRNA Length = 1191 Score = 42.1 bits (21), Expect = 2.0 Identities = 24/25 (96%) Strand = Plus / Plus Query: 166 tgacgtctatgagtttgtcaagaag 190 ||||||||||||||| ||||||||| Sbjct: 744 tgacgtctatgagttcgtcaagaag 768
>emb|AL607000.3|OSJN00132 Oryza sativa genomic DNA, chromosome 4, BAC clone: OSJNBb0089B03, complete sequence Length = 130910 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tcctggagaagttcgaggagc 503 ||||||||||||||||||||| Sbjct: 79739 tcctggagaagttcgaggagc 79719
>dbj|AP008210.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 4, complete sequence Length = 35498469 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tcctggagaagttcgaggagc 503 ||||||||||||||||||||| Sbjct: 18611873 tcctggagaagttcgaggagc 18611853
>dbj|AP008213.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, complete sequence Length = 29644043 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 cgaggttactcaaggaaagat 316 ||||||||||||||||||||| Sbjct: 26939466 cgaggttactcaaggaaagat 26939486
>gb|AC007744.2| Homo sapiens BAC clone RP11-482H16 from 2, complete sequence Length = 199218 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 63 ctgatgccccctgggttctca 83 ||||||||||||||||||||| Sbjct: 158896 ctgatgccccctgggttctca 158916
>dbj|AP003822.2| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, BAC clone:OJ1316_A04 Length = 87144 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 cgaggttactcaaggaaagat 316 ||||||||||||||||||||| Sbjct: 3944 cgaggttactcaaggaaagat 3964
>dbj|AP005455.5| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 7, PAC clone:P0503D09 Length = 144443 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 296 cgaggttactcaaggaaagat 316 ||||||||||||||||||||| Sbjct: 88057 cgaggttactcaaggaaagat 88077
>dbj|AK104769.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-039-A04, full insert sequence Length = 1019 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tcctggagaagttcgaggagc 503 ||||||||||||||||||||| Sbjct: 571 tcctggagaagttcgaggagc 551
>dbj|AK104271.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-311-F10, full insert sequence Length = 1019 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tcctggagaagttcgaggagc 503 ||||||||||||||||||||| Sbjct: 571 tcctggagaagttcgaggagc 551
>dbj|AK067334.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013102N12, full insert sequence Length = 1087 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Minus Query: 483 tcctggagaagttcgaggagc 503 ||||||||||||||||||||| Sbjct: 668 tcctggagaagttcgaggagc 648
>emb|CR626874.10| Zebrafish DNA sequence from clone CH211-219H2 in linkage group 18, complete sequence Length = 214825 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 511 cgtcatggagactgccatcaa 531 ||||||||||||||||||||| Sbjct: 80079 cgtcatggagactgccatcaa 80099
>emb|CT572999.10| Mouse DNA sequence from clone RP23-6C18 on chromosome 12, complete sequence Length = 176044 Score = 42.1 bits (21), Expect = 2.0 Identities = 21/21 (100%) Strand = Plus / Plus Query: 196 aaaattcaaggaaacaaaaag 216 ||||||||||||||||||||| Sbjct: 72277 aaaattcaaggaaacaaaaag 72297
>dbj|D63166.1| Brassica napus mRNA for CTP:phosphocholine cytidylyltransferase, complete cds Length = 1321 Score = 42.1 bits (21), Expect = 2.0 Identities = 36/41 (87%) Strand = Plus / Plus Query: 38 tgcaagtgggttgatgaggtcattcctgatgccccctgggt 78 ||||||||||| ||||| |||||||| ||||| || ||||| Sbjct: 319 tgcaagtgggtggatgaagtcattcccgatgcaccgtgggt 359 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 248 atgaggatagtgaaggattacaaccagtatgt 279 ||||| |||||||| ||||| ||||||||||| Sbjct: 529 atgagaatagtgaaagattataaccagtatgt 560
>ref|XM_480210.1| Oryza sativa (japonica cultivar-group), mRNA Length = 1075 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 32 cgccactgcaagtgggttgatgaggtcattcctgatgccccctgggtt 79 ||||| ||||||||||| |||||||| || || ||||| || |||||| Sbjct: 313 cgccattgcaagtgggtggatgaggtgataccagatgctccatgggtt 360
>ref|XM_519471.1| PREDICTED: Pan troglodytes similar to SCO-spondin (LOC463830), mRNA Length = 18710 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ggagaggctggggaggcagg 563 |||||||||||||||||||| Sbjct: 12094 ggagaggctggggaggcagg 12113
>gb|AC113536.10| Mus musculus chromosome 17, clone RP23-77L13, complete sequence Length = 153863 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 470 tgggtggcgggcttcctggagaag 493 ||||||| |||||||||||||||| Sbjct: 127569 tgggtggggggcttcctggagaag 127546
>gb|AC091524.4| Homo sapiens BAC clone RP11-132L11 from 7, complete sequence Length = 69887 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 attggaaaattcaaggaaacaaaa 214 ||||||||||| |||||||||||| Sbjct: 42011 attggaaaattgaaggaaacaaaa 42034
>gb|AC004877.1| Homo sapiens PAC clone RP4-751H13 from 7, complete sequence Length = 128361 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ggagaggctggggaggcagg 563 |||||||||||||||||||| Sbjct: 69891 ggagaggctggggaggcagg 69910
>gb|AC146152.2| Pan troglodytes BAC clone RP43-23M20 from 7, complete sequence Length = 141539 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 attggaaaattcaaggaaacaaaa 214 ||||||||||| |||||||||||| Sbjct: 105774 attggaaaattgaaggaaacaaaa 105751
>gb|AC148834.3| Pan troglodytes BAC clone CH251-4D23 from chromosome 7, complete sequence Length = 192312 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 191 attggaaaattcaaggaaacaaaa 214 ||||||||||| |||||||||||| Sbjct: 173593 attggaaaattgaaggaaacaaaa 173616
>gb|M35878.1|HUMIBP3 Homo sapiens growth factor-binding protein-3 precursor (IGFBP3) gene, complete cds Length = 10884 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 attggaaaattcaaggaaacaaaa 214 ||||||||||| |||||||||||| Sbjct: 133 attggaaaattgaaggaaacaaaa 110
>ref|XM_935762.1| PREDICTED: Homo sapiens SCO-spondin homolog (Bos taurus), transcript variant 7 (SSPO), mRNA Length = 15575 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ggagaggctggggaggcagg 563 |||||||||||||||||||| Sbjct: 10311 ggagaggctggggaggcagg 10330
>ref|XM_945757.1| PREDICTED: Homo sapiens SCO-spondin homolog (Bos taurus), transcript variant 16 (SSPO), mRNA Length = 15576 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ggagaggctggggaggcagg 563 |||||||||||||||||||| Sbjct: 10312 ggagaggctggggaggcagg 10331
>ref|XM_379967.3| PREDICTED: Homo sapiens SCO-spondin homolog (Bos taurus), transcript variant 1 (SSPO), mRNA Length = 15574 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 544 ggagaggctggggaggcagg 563 |||||||||||||||||||| Sbjct: 10310 ggagaggctggggaggcagg 10329
>gb|CP000264.1| Jannaschia sp. CCS1, complete genome Length = 4317977 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 504 actgccacgtcatggagact 523 |||||||||||||||||||| Sbjct: 4279028 actgccacgtcatggagact 4279009
>gb|AC133096.3| Mus musculus BAC clone RP23-271C13 from chromosome 1, complete sequence Length = 195512 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 543 aggagaggctggggaggcag 562 |||||||||||||||||||| Sbjct: 103860 aggagaggctggggaggcag 103841
>dbj|AP008208.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, complete sequence Length = 35954743 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 43 gtgggttgatgaggtcattcctgatgccccctgggt 78 |||||| ||||| |||||||||||||| || ||||| Sbjct: 4026482 gtgggtggatgaagtcattcctgatgctccatgggt 4026517
>gb|AC084576.1|CBRG39N24 Caenorhabditis briggsae cosmid G39N24, complete sequence Length = 45289 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 93 tcattgagaagcatcagatt 112 |||||||||||||||||||| Sbjct: 28920 tcattgagaagcatcagatt 28939
>gb|AC091114.11| Homo sapiens chromosome 8, clone RP11-136O12, complete sequence Length = 182291 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tgatgctttgccttatgctg 146 |||||||||||||||||||| Sbjct: 134653 tgatgctttgccttatgctg 134672
>dbj|AP005772.3| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 2, BAC clone:OSJNBa0073A21 Length = 170051 Score = 40.1 bits (20), Expect = 7.9 Identities = 32/36 (88%) Strand = Plus / Plus Query: 43 gtgggttgatgaggtcattcctgatgccccctgggt 78 |||||| ||||| |||||||||||||| || ||||| Sbjct: 73148 gtgggtggatgaagtcattcctgatgctccatgggt 73183
>dbj|AK059796.1| Oryza sativa (japonica cultivar-group) cDNA clone:006-204-E10, full insert sequence Length = 1076 Score = 40.1 bits (20), Expect = 7.9 Identities = 41/48 (85%) Strand = Plus / Plus Query: 32 cgccactgcaagtgggttgatgaggtcattcctgatgccccctgggtt 79 ||||| ||||||||||| |||||||| || || ||||| || |||||| Sbjct: 313 cgccattgcaagtgggtggatgaggtgataccagatgctccatgggtt 360
>gb|AY110140.1| Zea mays CL37086_1 mRNA sequence Length = 1140 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Minus Query: 398 caagaaaagttgcaaacggt 417 |||||||||||||||||||| Sbjct: 324 caagaaaagttgcaaacggt 305
>gb|AC155272.3| Mus musculus BAC clone RP23-79N13 from chromosome 13, complete sequence Length = 213306 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 196 aaaattcaaggaaacaaaaa 215 |||||||||||||||||||| Sbjct: 117973 aaaattcaaggaaacaaaaa 117992
>dbj|AB056715.1| Arabidopsis thaliana AtCCT2 gene for CTP:phosphorylcholine cytidylyltransferase, complete cds Length = 1918 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 248 atgaggatagtgaaggattacaaccagtatgt 279 ||||| |||||||| ||||| ||||||||||| Sbjct: 933 atgagaatagtgaaagattataaccagtatgt 964
>emb|Z97338.2|ATFCA3 Arabidopsis thaliana DNA chromosome 4, ESSA I FCA contig fragment No. 3 Length = 200252 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 248 atgaggatagtgaaggattacaaccagtatgt 279 ||||| |||||||| ||||| ||||||||||| Sbjct: 3240 atgagaatagtgaaagattataaccagtatgt 3271
>emb|AL161540.2|ATCHRIV40 Arabidopsis thaliana DNA chromosome 4, contig fragment No. 40 Length = 197405 Score = 40.1 bits (20), Expect = 7.9 Identities = 29/32 (90%) Strand = Plus / Plus Query: 248 atgaggatagtgaaggattacaaccagtatgt 279 ||||| |||||||| ||||| ||||||||||| Sbjct: 149122 atgagaatagtgaaagattataaccagtatgt 149153
>gb|DQ301819.1| Homo sapiens insulin-like growth factor binding protein 3 (IGFBP3) gene, complete cds Length = 12958 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Minus Query: 191 attggaaaattcaaggaaacaaaa 214 ||||||||||| |||||||||||| Sbjct: 152 attggaaaattgaaggaaacaaaa 129
>emb|AL611927.21| Mouse DNA sequence from clone RP23-445E20 on chromosome 4, complete sequence Length = 111802 Score = 40.1 bits (20), Expect = 7.9 Identities = 23/24 (95%) Strand = Plus / Plus Query: 546 agaggctggggaggcaggccggca 569 ||||||||||||||||||| |||| Sbjct: 75177 agaggctggggaggcaggcaggca 75200
>gb|AF252829.4| Homo sapiens chromosome 8 clone RP11-495D4 map 8q24.2, complete sequence Length = 199668 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tgatgctttgccttatgctg 146 |||||||||||||||||||| Sbjct: 8367 tgatgctttgccttatgctg 8386
>gb|AC104319.3| Homo sapiens chromosome 8 clone RP11-407G9 map 8q24.2, complete sequence Length = 216749 Score = 40.1 bits (20), Expect = 7.9 Identities = 20/20 (100%) Strand = Plus / Plus Query: 127 tgatgctttgccttatgctg 146 |||||||||||||||||||| Sbjct: 164764 tgatgctttgccttatgctg 164783 Database: nt Posted date: May 29, 2006 11:10 AM Number of letters in database: 3,984,495,279 Number of sequences in database: 917,343 Database: /shigen/export/home/twatanab/db/nt/nt.01 Posted date: May 29, 2006 11:16 AM Number of letters in database: 3,988,174,986 Number of sequences in database: 835,257 Database: /shigen/export/home/twatanab/db/nt/nt.02 Posted date: May 29, 2006 11:21 AM Number of letters in database: 3,991,246,324 Number of sequences in database: 771,481 Database: /shigen/export/home/twatanab/db/nt/nt.03 Posted date: May 29, 2006 11:27 AM Number of letters in database: 3,990,718,311 Number of sequences in database: 977,174 Database: /shigen/export/home/twatanab/db/nt/nt.04 Posted date: May 29, 2006 11:29 AM Number of letters in database: 1,278,410,368 Number of sequences in database: 400,813 Lambda K H 1.37 0.711 1.31 Gapped Lambda K H 1.37 0.711 1.31 Matrix: blastn matrix:1 -3 Gap Penalties: Existence: 5, Extension: 2 Number of Hits to DB: 4,755,703 Number of Sequences: 3902068 Number of extensions: 4755703 Number of successful extensions: 96557 Number of sequences better than 10.0: 79 Number of HSP's better than 10.0 without gapping: 79 Number of HSP's successfully gapped in prelim test: 0 Number of HSP's that attempted gapping in prelim test: 96150 Number of HSP's gapped (non-prelim): 405 length of query: 578 length of database: 17,233,045,268 effective HSP length: 23 effective length of query: 555 effective length of database: 17,143,297,704 effective search space: 9514530225720 effective search space used: 9514530225720 T: 0 A: 0 X1: 6 (11.9 bits) X2: 15 (29.7 bits) S1: 12 (24.3 bits) S2: 20 (40.1 bits)
