ナショナルバイオリソースプロジェクト
-Barley Genetic Resources Database-
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更新日：2016年5月1日

Clone Information

BLAST Search Result

Clone Name baal31b22
Clone Library Name barley_pub
No. Definition Score
(bits)		 E
Value
1RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase ... 196 4e-99
2RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase a... 175 5e-88
3RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase ... 173 6e-84
4RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase a... 174 2e-82
5RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase ... 179 3e-81
6RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase ... 179 3e-81
7RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase a... 178 5e-81
8RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase a... 180 5e-80
9RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase ... 171 7e-79
10RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase ... 169 5e-78
11RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase a... 170 8e-78
12RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase a... 176 1e-77
13RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase a... 173 3e-76
14RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase a... 168 7e-76
15RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase a... 176 1e-75
16RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase a... 154 2e-56
17RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase a... 123 5e-31
18RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase a... 123 7e-31
19PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4 40 0.005
20CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B ... 38 0.019
21VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants 37 0.043
22Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297 37 0.056
23PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (C... 35 0.13
24KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (A... 35 0.16
25PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Prote... 35 0.16
26PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Prote... 35 0.16
27PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Prote... 35 0.16
28VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein ... 35 0.16
29SPAST_HUMAN (Q9UBP0) Spastin 35 0.21
30SPAST_MOUSE (Q9QYY8) Spastin 35 0.21
31KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (A... 34 0.28
32PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteaso... 34 0.36
33PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog 34 0.36
34NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nucl... 33 0.48
35NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nucl... 33 0.48
36RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7 33 0.48
37PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7 33 0.81
38FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.2... 33 0.81
39YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homo... 33 0.81
40PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Prote... 33 0.81
41TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (T... 33 0.81
42TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER... 33 0.81
43TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER... 33 0.81
44TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (T... 33 0.81
45TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (T... 33 0.81
46YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.... 33 0.81
47FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.2... 33 0.81
48FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.2... 33 0.81
49YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.... 33 0.81
50YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.... 33 0.81
51PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog ... 33 0.81
52FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.2... 33 0.81
53FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.... 33 0.81
54CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48 33 0.81
55RECA_IDILO (Q5QUB8) Protein recA (Recombinase A) 32 1.1
56PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 prot... 32 1.1
57PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 prot... 32 1.1
58PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 prot... 32 1.1
59FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.... 32 1.1
60PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog ... 32 1.1
61PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog ... 32 1.4
62KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina... 32 1.4
63KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kina... 32 1.4
64FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.... 32 1.4
65PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein) 32 1.4
66FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.2... 32 1.4
67CDC48_YEAST (P25694) Cell division control protein 48 32 1.8
68CDCH_HALSA (Q9HPF0) Protein cdcH 32 1.8
69PCRB_SULAC (Q4JAS3) Protein pcrB homolog 31 2.4
70FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.... 31 2.4
71PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxi... 31 2.4
72PTR2_CANAL (P46030) Peptide transporter PTR2 31 2.4
73PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog ... 31 2.4
74YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497) 31 3.1
75RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2... 31 3.1
76TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase h... 30 4.0
77RECA_GEOSL (P62215) Protein recA (Recombinase A) 30 4.0
78FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.2... 30 4.0
79KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast pr... 30 4.0
80UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine ... 30 4.0
81RECA_CHRVI (O32377) Protein recA (Recombinase A) 30 4.0
82PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-bin... 30 4.0
83RECA2_MYXXA (P48292) Protein recA 2 (Recombinase A 2) 30 5.3
84RECA_LISMO (Q9L723) Protein recA (Recombinase A) 30 5.3
85RECA_LISMF (Q71ZS2) Protein recA (Recombinase A) 30 5.3
86RECA_LISIN (Q92BV7) Protein recA (Recombinase A) 30 5.3
87KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (A... 30 5.3
88RECA_CHLTE (O52393) Protein recA (Recombinase A) 30 5.3
89RECA_PORGI (P77925) Protein recA (Recombinase A) 30 5.3
90COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosph... 30 5.3
91TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase h... 30 5.3
92CD48A_ARATH (P54609) Cell division control protein 48 homolog A ... 30 6.9
93CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog 30 6.9
94KAD1_RABIT (P00569) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (A... 30 6.9
95KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 ... 30 6.9
96RECA_CLOAB (P58254) Protein recA (Recombinase A) 30 6.9
97RECA_ACHLA (P29225) Protein recA (Recombinase A) 30 6.9
98RECA_AERSA (P94190) Protein recA (Recombinase A) 30 6.9
99CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Val... 30 6.9
100CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 h... 30 6.9
101CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E ... 30 6.9
102RECA_LISWE (Q83TH3) Protein recA (Recombinase A) 29 9.0
103RECA_LISSE (Q83TH4) Protein recA (Recombinase A) 29 9.0
104RECA_LISIV (Q83TH2) Protein recA (Recombinase A) 29 9.0
105RECA1_LACLA (Q01840) Protein recA, chromosomal (Recombinase A) 29 9.0
106FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.... 29 9.0
107RECA_THETN (Q8RA55) Protein recA (Recombinase A) 29 9.0
108PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A 29 9.0
109RECA_BACHD (Q9KAA7) Protein recA (Recombinase A) 29 9.0
110ALMS1_HUMAN (Q8TCU4) Alstrom syndrome protein 1 29 9.0
111UCK1_MOUSE (P52623) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK... 29 9.0
112UCK1_HUMAN (Q9HA47) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK... 29 9.0
113PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor t... 29 9.0
114RECA_CLOTE (Q895I5) Protein recA (Recombinase A) 29 9.0
115RECA_BACSK (Q5WFX1) Protein recA (Recombinase A) 29 9.0
116RECA_OCEIH (Q8CXG7) Protein recA (Recombinase A) 29 9.0
117PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteaso... 29 9.0
118FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-) 29 9.0
119FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-) 29 9.0
120FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-) 29 9.0
121FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-) 29 9.0
122FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-) 29 9.0 
>RCAA_HORVU (Q40073) Ribulose bisphosphate carboxylase/oxygenase activase A,|
           chloroplast precursor (RuBisCO activase A) (RA A)
          Length = 464

 Score =  196 bits (499), Expect(3) = 4e-99
 Identities = 95/98 (96%), Positives = 96/98 (97%)
 Frame = +2

Query: 38  RTNRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVL 217
           + NRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTG GTHEAVL
Sbjct: 40  KANRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGHGTHEAVL 99

Query: 218 SSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           SSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK
Sbjct: 100 SSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 137



 Score =  183 bits (464), Expect(3) = 4e-99
 Identities = 88/89 (98%), Positives = 89/89 (100%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI
Sbjct: 137 KNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 196

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAADMIKKGKMCCLFINDLDAGAG
Sbjct: 197 RQRYREAADMIKKGKMCCLFINDLDAGAG 225



 Score = 23.5 bits (49), Expect(3) = 4e-99
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +3

Query: 3  TSAVNYHGK 29
          TSAVNYHGK
Sbjct: 29 TSAVNYHGK 37
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>RCA_ORYSA (P93431) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 432

 Score =  175 bits (443), Expect(3) = 5e-88
 Identities = 85/89 (95%), Positives = 88/89 (98%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLI
Sbjct: 138 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLI 196

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAAD+IKKGKMCCLFINDLDAGAG
Sbjct: 197 RQRYREAADIIKKGKMCCLFINDLDAGAG 225



 Score =  167 bits (423), Expect(3) = 5e-88
 Identities = 83/98 (84%), Positives = 89/98 (90%), Gaps = 2/98 (2%)
 Frame = +2

Query: 44  NRFTVMAAENIDEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVL 217
           NRF VMA E +DE + TD  +WKGLAYDISDDQQDITRGKG VDSLFQAPTGDGTHEAVL
Sbjct: 42  NRFKVMAKE-LDEGKQTDQDRWKGLAYDISDDQQDITRGKGFVDSLFQAPTGDGTHEAVL 100

Query: 218 SSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           SSYEY+SQGLR YDFDNTMGGFYIAP+FMDKLVVH+SK
Sbjct: 101 SSYEYLSQGLRTYDFDNTMGGFYIAPSFMDKLVVHISK 138



 Score = 23.5 bits (49), Expect(3) = 5e-88
 Identities = 9/9 (100%), Positives = 9/9 (100%)
 Frame = +3

Query: 3  TSAVNYHGK 29
          TSAVNYHGK
Sbjct: 29 TSAVNYHGK 37
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>RCAB_HORVU (Q42450) Ribulose bisphosphate carboxylase/oxygenase activase B,|
           chloroplast precursor (RuBisCO activase B) (RA B)
          Length = 425

 Score =  173 bits (438), Expect(2) = 6e-84
 Identities = 84/89 (94%), Positives = 87/89 (97%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN GEPAKLI
Sbjct: 135 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGN-GEPAKLI 193

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAAD+I KGKMCCLFINDLDAGAG
Sbjct: 194 RQRYREAADIINKGKMCCLFINDLDAGAG 222



 Score =  157 bits (398), Expect(2) = 6e-84
 Identities = 77/95 (81%), Positives = 86/95 (90%), Gaps = 3/95 (3%)
 Frame = +2

Query: 56  VMAAEN-IDEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSY 226
           VMAA+  +D+ + TD  +WKGLAYDISDDQQDITRGKGIVDSLFQAP GDGTHEA+LSSY
Sbjct: 41  VMAAKKELDQGKQTDADRWKGLAYDISDDQQDITRGKGIVDSLFQAPMGDGTHEAILSSY 100

Query: 227 EYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           EY+SQGLRKYDFDNTM G YIAPAFMDKL+VHL+K
Sbjct: 101 EYISQGLRKYDFDNTMDGLYIAPAFMDKLIVHLAK 135
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>RCA_MAIZE (Q9ZT00) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 433

 Score =  174 bits (441), Expect(2) = 2e-82
 Identities = 83/89 (93%), Positives = 87/89 (97%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGI PIMMSAGELESGNAGEPAKLI
Sbjct: 143 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGITPIMMSAGELESGNAGEPAKLI 202

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREA+D+IKKGKM CLFINDLDAGAG
Sbjct: 203 RQRYREASDLIKKGKMSCLFINDLDAGAG 231



 Score =  151 bits (381), Expect(2) = 2e-82
 Identities = 72/98 (73%), Positives = 83/98 (84%), Gaps = 2/98 (2%)
 Frame = +2

Query: 44  NRFTVMAAENIDEKRNTD--KWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVL 217
           +RF  MAA+ +DE + TD  +WKGLAYDISDDQQDITRGKG+VD+LFQAP GDGTH AVL
Sbjct: 46  SRFKAMAAKEVDETKQTDEDRWKGLAYDISDDQQDITRGKGLVDNLFQAPMGDGTHVAVL 105

Query: 218 SSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           SSY+Y+SQG + Y+FDN M GFYIA  FMDKLVVHLSK
Sbjct: 106 SSYDYISQGQKSYNFDNMMDGFYIAKGFMDKLVVHLSK 143
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>RCA1_LARTR (Q7X9A0) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
           (RubisCO activase alpha form)
          Length = 476

 Score =  179 bits (453), Expect(2) = 3e-81
 Identities = 85/89 (95%), Positives = 89/89 (100%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI
Sbjct: 147 KNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 206

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAAD+IKKGKMCCLFINDLDAGAG
Sbjct: 207 RQRYREAADIIKKGKMCCLFINDLDAGAG 235



 Score =  142 bits (359), Expect(2) = 3e-81
 Identities = 67/98 (68%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
 Frame = +2

Query: 41  TNRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVL 217
           +  F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+
Sbjct: 50  SGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVM 109

Query: 218 SSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++K
Sbjct: 110 SSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITK 147
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>RCA2_LARTR (Q7X999) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
           (RubisCO activase beta form)
          Length = 435

 Score =  179 bits (453), Expect(2) = 3e-81
 Identities = 85/89 (95%), Positives = 89/89 (100%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NF++LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI
Sbjct: 147 KNFLSLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 206

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAAD+IKKGKMCCLFINDLDAGAG
Sbjct: 207 RQRYREAADIIKKGKMCCLFINDLDAGAG 235



 Score =  142 bits (359), Expect(2) = 3e-81
 Identities = 67/98 (68%), Positives = 83/98 (84%), Gaps = 1/98 (1%)
 Frame = +2

Query: 41  TNRFTVMAAE-NIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVL 217
           +  F ++A E + D++ + DKWKGLAYDISDDQQDITRGKG+VD+LFQAP   GTH AV+
Sbjct: 50  SGNFKIVAQEISEDQQTDKDKWKGLAYDISDDQQDITRGKGMVDTLFQAPMQSGTHYAVM 109

Query: 218 SSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           SSY+Y+SQGLR+Y+ DN M GFYIAPAFMDKLVVH++K
Sbjct: 110 SSYDYISQGLRQYNLDNNMDGFYIAPAFMDKLVVHITK 147
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>RCA_ARATH (P10896) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 474

 Score =  178 bits (451), Expect(2) = 5e-81
 Identities = 84/89 (94%), Positives = 88/89 (98%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NF+TLPNIK+PLILGIWGGKGQGKSFQCELV AKMGINPIMMSAGELESGNAGEPAKLI
Sbjct: 147 KNFLTLPNIKVPLILGIWGGKGQGKSFQCELVMAKMGINPIMMSAGELESGNAGEPAKLI 206

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAAD+IKKGKMCCLFINDLDAGAG
Sbjct: 207 RQRYREAADLIKKGKMCCLFINDLDAGAG 235



 Score =  143 bits (360), Expect(2) = 5e-81
 Identities = 68/94 (72%), Positives = 81/94 (86%)
 Frame = +2

Query: 50  FTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYE 229
           F V+A +  D++ + D+W+GLAYD SDDQQDITRGKG+VDS+FQAP G GTH AVLSSYE
Sbjct: 55  FKVLAVKE-DKQTDGDRWRGLAYDTSDDQQDITRGKGMVDSVFQAPMGTGTHHAVLSSYE 113

Query: 230 YVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           YVSQGLR+Y+ DN M GFYIAPAFMDKLVVH++K
Sbjct: 114 YVSQGLRQYNLDNMMDGFYIAPAFMDKLVVHITK 147
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>RCA_CUCSA (Q01587) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 413

 Score =  180 bits (456), Expect(2) = 5e-80
 Identities = 84/90 (93%), Positives = 90/90 (100%)
 Frame = +1

Query: 325 LQNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKL 504
           ++NF+TLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKL
Sbjct: 143 VKNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKL 202

Query: 505 IRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           IRQRYREAAD+IKKGKMCCLFINDLDAGAG
Sbjct: 203 IRQRYREAADIIKKGKMCCLFINDLDAGAG 232



 Score =  137 bits (346), Expect(2) = 5e-80
 Identities = 62/97 (63%), Positives = 76/97 (78%)
 Frame = +2

Query: 41  TNRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 220
           T  F ++A ++ +++   DKW+GLA+D SDDQQDITRGKG+ D LFQAP G GTH AVLS
Sbjct: 48  TGNFKIVAEQDEEKQTEKDKWRGLAFDTSDDQQDITRGKGLADPLFQAPMGTGTHNAVLS 107

Query: 221 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           SYEY+S GLR Y +DN + GFYIAPAFMDKL VH+ K
Sbjct: 108 SYEYISAGLRDYSYDNNVDGFYIAPAFMDKLTVHIVK 144
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>RCA1_TOBAC (Q40460) Ribulose bisphosphate carboxylase/oxygenase activase 1,|
           chloroplast precursor (RuBisCO activase 1) (RA 1)
          Length = 442

 Score =  171 bits (433), Expect(2) = 7e-79
 Identities = 80/89 (89%), Positives = 86/89 (96%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NF+ LPNIK+PLILGIWGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLI
Sbjct: 151 KNFLKLPNIKVPLILGIWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLI 210

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAA++I+KG MCCLFINDLDAGAG
Sbjct: 211 RQRYREAAEIIRKGNMCCLFINDLDAGAG 239



 Score =  142 bits (359), Expect(2) = 7e-79
 Identities = 69/101 (68%), Positives = 82/101 (81%), Gaps = 4/101 (3%)
 Frame = +2

Query: 41  TNRFTVMAAENID----EKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHE 208
           TN+   + AE ID    ++ ++D+WKGL  D SDDQQDITRGKG+VDSLFQAPTG GTH 
Sbjct: 51  TNKSLRIVAEQIDVDPKKQTDSDRWKGLVQDFSDDQQDITRGKGMVDSLFQAPTGTGTHH 110

Query: 209 AVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           AVL SYEYVSQGLR+Y+ DN + GFYIAPAFMDKLVVH++K
Sbjct: 111 AVLQSYEYVSQGLRQYNLDNKLDGFYIAPAFMDKLVVHITK 151
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>RCA2_TOBAC (Q40565) Ribulose bisphosphate carboxylase/oxygenase activase 2,|
           chloroplast precursor (RuBisCO activase 2) (RA 2)
          Length = 439

 Score =  169 bits (428), Expect(2) = 5e-78
 Identities = 78/89 (87%), Positives = 86/89 (96%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NF+ LPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLI
Sbjct: 151 KNFLKLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLI 210

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAA++I+KG +CCLFINDLDAGAG
Sbjct: 211 RQRYREAAEIIRKGNICCLFINDLDAGAG 239



 Score =  142 bits (357), Expect(2) = 5e-78
 Identities = 71/101 (70%), Positives = 82/101 (81%), Gaps = 4/101 (3%)
 Frame = +2

Query: 41  TNRFTVMAAE--NIDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHE 208
           TNR   +AAE  + D K+ T  D+WKGL  D SDDQQDI RGKG+VDSLFQAPTG GTH 
Sbjct: 51  TNRSLRIAAEEKDADPKKQTYSDRWKGLVQDFSDDQQDIARGKGMVDSLFQAPTGTGTHH 110

Query: 209 AVLSSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           AVL SYEYVSQGLR+Y+ DNT+ GFYIAP+FMDKLVVH++K
Sbjct: 111 AVLQSYEYVSQGLRQYNMDNTLDGFYIAPSFMDKLVVHITK 151
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>RCA_MALDO (Q40281) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 437

 Score =  170 bits (431), Expect(2) = 8e-78
 Identities = 81/89 (91%), Positives = 87/89 (97%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NFMTLPN+K+PLILGIWGGKGQGKSFQCELVFAKM I+PIMMSAGELESGNAGEPAKLI
Sbjct: 147 KNFMTLPNMKVPLILGIWGGKGQGKSFQCELVFAKMRISPIMMSAGELESGNAGEPAKLI 206

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAAD+I+KGKMC LFINDLDAGAG
Sbjct: 207 RQRYREAADIIRKGKMCALFINDLDAGAG 235



 Score =  140 bits (352), Expect(2) = 8e-78
 Identities = 63/92 (68%), Positives = 80/92 (86%)
 Frame = +2

Query: 56  VMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYV 235
           ++A+ + D++ + D+WKGLA+D SDDQQDITRGKG VDSLFQAP G GTH A++SSYEY+
Sbjct: 56  IVASVDEDKQTDKDRWKGLAFDTSDDQQDITRGKGKVDSLFQAPQGSGTHFAIMSSYEYI 115

Query: 236 SQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           S GLR+Y+FDN M G+YIAPAFMDKLVVH++K
Sbjct: 116 STGLRQYNFDNNMDGYYIAPAFMDKLVVHITK 147
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>RCA_PHAVU (O64981) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 441

 Score =  176 bits (446), Expect(2) = 1e-77
 Identities = 83/89 (93%), Positives = 88/89 (98%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NFMTLPNIK+PLILG+WGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI
Sbjct: 151 KNFMTLPNIKVPLILGVWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 210

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREA+D+IKKGKMC LFINDLDAGAG
Sbjct: 211 RQRYREASDLIKKGKMCVLFINDLDAGAG 239



 Score =  133 bits (335), Expect(2) = 1e-77
 Identities = 64/97 (65%), Positives = 82/97 (84%), Gaps = 3/97 (3%)
 Frame = +2

Query: 50  FTVMAAEN-IDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 220
           F ++AA+  I+E + T  D+W+GLAYD+SDDQQDITRGKG+VDSLFQAP   GTH AV+S
Sbjct: 55  FKIVAADKEIEETQQTEGDRWRGLAYDVSDDQQDITRGKGLVDSLFQAPMDAGTHYAVIS 114

Query: 221 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           S++Y+S GLR+Y+FDN   GFYIAPAF+DKLVVH++K
Sbjct: 115 SHKYLSAGLRQYNFDNIKDGFYIAPAFLDKLVVHIAK 151
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>RCA_LYCPN (O49074) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 459

 Score =  173 bits (438), Expect(2) = 3e-76
 Identities = 80/89 (89%), Positives = 87/89 (97%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NF+TLPNIK+PLILG+WGGKGQGKSFQCELVF KMGINPIMMSAGELESGNAGEPAKLI
Sbjct: 146 KNFLTLPNIKVPLILGVWGGKGQGKSFQCELVFRKMGINPIMMSAGELESGNAGEPAKLI 205

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAA++I+KG MCCLFINDLDAGAG
Sbjct: 206 RQRYREAAEIIRKGNMCCLFINDLDAGAG 234



 Score =  132 bits (331), Expect(2) = 3e-76
 Identities = 62/97 (63%), Positives = 77/97 (79%)
 Frame = +2

Query: 41  TNRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 220
           +NR   + A+ +DE +  D+WKGL  + SDDQQDI RGKG+VDSLFQAPTG GTH A+++
Sbjct: 51  SNRNLRVVAQEVDETKE-DRWKGLYDNTSDDQQDIARGKGLVDSLFQAPTGTGTHHAIMN 109

Query: 221 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           SYEYVSQ L+ Y  DN + GFYIAPAFMDKLVVH++K
Sbjct: 110 SYEYVSQALKTYQLDNKLDGFYIAPAFMDKLVVHITK 146
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>RCA_SPIOL (P10871) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 472

 Score =  168 bits (425), Expect(2) = 7e-76
 Identities = 79/89 (88%), Positives = 85/89 (95%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NF+ LPNIKIPLILG+WGGKGQGKSFQCELVFAK+GINPIMMSAGELESGNAGEPAKLI
Sbjct: 145 KNFLNLPNIKIPLILGVWGGKGQGKSFQCELVFAKLGINPIMMSAGELESGNAGEPAKLI 204

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAAD+I KGKMC LFINDL+ GAG
Sbjct: 205 RQRYREAADLIAKGKMCALFINDLEPGAG 233



 Score =  135 bits (341), Expect(2) = 7e-76
 Identities = 68/98 (69%), Positives = 76/98 (77%)
 Frame = +2

Query: 38  RTNRFTVMAAENIDEKRNTDKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVL 217
           RT   TV AAEN  E++NTDKW  LA D SDDQ DI RGKG+VDSLFQAP   GTH  + 
Sbjct: 50  RTTSMTVKAAEN--EEKNTDKWAHLAKDFSDDQLDIRRGKGMVDSLFQAPADAGTHVPIQ 107

Query: 218 SSYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           SS+EY SQGLRKYD DN +G FYIAPAFMDKLVVH++K
Sbjct: 108 SSFEYESQGLRKYDIDNMLGDFYIAPAFMDKLVVHITK 145
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>RCA_PHAAU (O98997) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 439

 Score =  176 bits (445), Expect(2) = 1e-75
 Identities = 84/89 (94%), Positives = 87/89 (97%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NFMTLPNIK+PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI
Sbjct: 149 KNFMTLPNIKVPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 208

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           RQRYREAAD+I KGKMC LFINDLDAGAG
Sbjct: 209 RQRYREAADLIAKGKMCALFINDLDAGAG 237



 Score =  127 bits (319), Expect(2) = 1e-75
 Identities = 66/97 (68%), Positives = 78/97 (80%), Gaps = 3/97 (3%)
 Frame = +2

Query: 50  FTVMAAEN-IDEKRNT--DKWKGLAYDISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLS 220
           F ++AAE  I+E + T  D+WKGLAYDISDDQQDITRGKG+VD LFQAP   GTH AV+S
Sbjct: 55  FKIVAAEKEIEESQQTNKDRWKGLAYDISDDQQDITRGKGMVDPLFQAPMDAGTHYAVMS 114

Query: 221 SYEYVSQGLRKYDFDNTMGGFYIAPAFMDKLVVHLSK 331
           SYEY+S GLR+   DN   GFYIAPAF+DKLVVH++K
Sbjct: 115 SYEYLSTGLRQ--LDNIKDGFYIAPAFLDKLVVHITK 149
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>RCA_CHLRE (P23489) Ribulose bisphosphate carboxylase/oxygenase activase,|
           chloroplast precursor (RuBisCO activase) (RA)
          Length = 408

 Score =  154 bits (389), Expect(2) = 2e-56
 Identities = 72/89 (80%), Positives = 81/89 (91%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NFM LP IK+PLILGIWGGKGQGK+FQC L + K+GI PI+MSAGELESGNAGEPAKLI
Sbjct: 120 KNFMDLPKIKVPLILGIWGGKGQGKTFQCALAYKKLGIAPIVMSAGELESGNAGEPAKLI 179

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           R RYREA+D+IKKG+MC LFINDLDAGAG
Sbjct: 180 RTRYREASDIIKKGRMCSLFINDLDAGAG 208



 Score = 84.7 bits (208), Expect(2) = 2e-56
 Identities = 43/86 (50%), Positives = 59/86 (68%), Gaps = 3/86 (3%)
 Frame = +2

Query: 83  KRNTDKWKGL--AYDISDDQQDITRGKGIVDSLFQAPTG-DGTHEAVLSSYEYVSQGLRK 253
           ++   +W+ +    D SDDQQDITRG+ +VD LFQ   G  GTH AVLSS EY+SQ   +
Sbjct: 37  RKQMGRWRSIDAGVDASDDQQDITRGREMVDDLFQGGFGAGGTHNAVLSSQEYLSQS--R 94

Query: 254 YDFDNTMGGFYIAPAFMDKLVVHLSK 331
             F+N   GFYI+PAF+DK+ +H++K
Sbjct: 95  ASFNNIEDGFYISPAFLDKMTIHIAK 120
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>RCA_ANASC (Q06721) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 415

 Score =  123 bits (309), Expect(2) = 5e-31
 Identities = 58/90 (64%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NF+ LP +++PLILGI G KG+GK+FQCEL F KMG+   ++S GELES +AG+PA+LI
Sbjct: 19  KNFLNLPGVRVPLILGIHGRKGEGKTFQCELAFEKMGVEVTLISGGELESPDAGDPARLI 78

Query: 508 RQRYREAADMIK-KGKMCCLFINDLDAGAG 594
           R RYRE A++IK +GKMC L INDLDAGAG
Sbjct: 79  RLRYRETAELIKVRGKMCVLMINDLDAGAG 108



 Score = 30.4 bits (67), Expect(2) = 5e-31
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 281 FYIAPAFMDKLVVHLSK 331
           +YIAP F+DKL VH++K
Sbjct: 3   YYIAPRFLDKLAVHITK 19
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>RCA_ANASP (P58555) Ribulose bisphosphate carboxylase/oxygenase activase|
           (RuBisCO activase) (RA)
          Length = 414

 Score =  123 bits (308), Expect(2) = 7e-31
 Identities = 58/90 (64%), Positives = 74/90 (82%), Gaps = 1/90 (1%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           +NF+ +P +++PLILGI G KG+GK+FQCEL F KMGI   ++S GELES +AG+PA+LI
Sbjct: 19  KNFLNIPGVRVPLILGIHGRKGEGKTFQCELAFEKMGIEVTLISGGELESPDAGDPARLI 78

Query: 508 RQRYREAADMIK-KGKMCCLFINDLDAGAG 594
           R RYRE A++IK +GKMC L INDLDAGAG
Sbjct: 79  RLRYRETAELIKVRGKMCVLMINDLDAGAG 108



 Score = 30.4 bits (67), Expect(2) = 7e-31
 Identities = 11/17 (64%), Positives = 15/17 (88%)
 Frame = +2

Query: 281 FYIAPAFMDKLVVHLSK 331
           +YIAP F+DKL VH++K
Sbjct: 3   YYIAPRFLDKLAVHITK 19
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>PRS10_SCHPO (O74445) Probable 26S protease subunit rpt4|
          Length = 388

 Score = 40.0 bits (92), Expect = 0.005
 Identities = 23/81 (28%), Positives = 44/81 (54%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           IK P  + ++G  G GK+     V A +G+N + + +  +     GE A++IR+ +  A 
Sbjct: 163 IKPPKGVLLYGPPGTGKTLLARAVAASLGVNFLKVVSSAIVDKYIGESARIIREMFGYA- 221

Query: 532 DMIKKGKMCCLFINDLDAGAG 594
              K+ + C +F++++DA  G
Sbjct: 222 ---KEHEPCVIFMDEIDAIGG 239
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>CD48B_ARATH (Q9ZPR1) Cell division control protein 48 homolog B (AtCDC48b)|
          Length = 603

 Score = 38.1 bits (87), Expect = 0.019
 Identities = 21/77 (27%), Positives = 40/77 (51%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  L ++G  G GK+     V  +   + I++S   +   +AGE  K++R+ + EA+
Sbjct: 53  LKWPRGLLLYGPPGTGKTSLVRAVVQECDAHLIVLSPHSVHRAHAGESEKVLREAFAEAS 112

Query: 532 DMIKKGKMCCLFINDLD 582
                 K   +FI+++D
Sbjct: 113 SHAVSDKPSVIFIDEID 129
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>VPS4_SCHPO (Q09803) Suppressor protein of bem1/bed5 double mutants|
          Length = 432

 Score = 37.0 bits (84), Expect = 0.043
 Identities = 21/73 (28%), Positives = 40/73 (54%)
 Frame = +1

Query: 376 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
           ++G  G GKS+  + V  + G     +S+ +L S   GE  +L+RQ +    +M ++ K 
Sbjct: 167 LYGPPGTGKSYLAKAVATEAGSTFFSISSSDLVSKWMGESERLVRQLF----EMAREQKP 222

Query: 556 CCLFINDLDAGAG 594
             +FI+++D+  G
Sbjct: 223 SIIFIDEIDSLCG 235
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>Y1297_ARCFU (O28972) Cell division cycle protein 48 homolog AF1297|
          Length = 733

 Score = 36.6 bits (83), Expect = 0.056
 Identities = 23/79 (29%), Positives = 40/79 (50%)
 Frame = +1

Query: 349 NIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREA 528
           NIK P  + ++G  G GK+   + V  +   N I +   EL S   GE  K +R+ +R+A
Sbjct: 485 NIKPPRGILLFGPPGTGKTLLAKAVANESNANFISVKGPELLSKWVGESEKHVREMFRKA 544

Query: 529 ADMIKKGKMCCLFINDLDA 585
             +      C +F +++D+
Sbjct: 545 RQVAP----CVIFFDEIDS 559
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>PRS7_YEAST (P33299) 26S protease regulatory subunit 7 homolog (CIM5 protein)|
           (TAT-binding homolog 3)
          Length = 467

 Score = 35.4 bits (80), Expect = 0.13
 Identities = 25/91 (27%), Positives = 43/91 (47%)
 Frame = +1

Query: 322 SLQNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAK 501
           S + F TL  I  P  + ++G  G GK+     V  +     I +   EL     GE A+
Sbjct: 231 SPERFATL-GIDPPKGILLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGAR 289

Query: 502 LIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           ++R+ +    +M +  K C +F +++DA  G
Sbjct: 290 MVRELF----EMARTKKACIIFFDEIDAVGG 316
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>KAD5_HUMAN (Q9Y6K8) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase)
          Length = 198

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 25/64 (39%), Positives = 32/64 (50%), Gaps = 3/64 (4%)
 Frame = +1

Query: 367 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 537
           I+ I GG G GK  QCE +  K G     +S GEL   E  +  E +KLIR    E  D+
Sbjct: 13  IIFIIGGPGSGKGTQCEKLVEKYGFT--HLSTGELLREELASESERSKLIRD-IMERGDL 69

Query: 538 IKKG 549
           +  G
Sbjct: 70  VPSG 73
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>PRS10_SPETR (P62335) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6) (Conserved ATPase
           domain protein 44) (CADp44)
          Length = 389

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 19/73 (26%), Positives = 38/73 (52%)
 Frame = +1

Query: 376 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
           ++G  G GK+     V +++  N + + +  +     GE A+LIR+ +  A D     + 
Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227

Query: 556 CCLFINDLDAGAG 594
           C +F++++DA  G
Sbjct: 228 CIIFMDEIDAIGG 240
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>PRS10_MOUSE (P62334) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 19/73 (26%), Positives = 38/73 (52%)
 Frame = +1

Query: 376 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
           ++G  G GK+     V +++  N + + +  +     GE A+LIR+ +  A D     + 
Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227

Query: 556 CCLFINDLDAGAG 594
           C +F++++DA  G
Sbjct: 228 CIIFMDEIDAIGG 240
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>PRS10_HUMAN (P62333) 26S protease regulatory subunit S10B (Proteasome subunit|
           p42) (Proteasome 26S subunit ATPase 6)
          Length = 389

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 19/73 (26%), Positives = 38/73 (52%)
 Frame = +1

Query: 376 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
           ++G  G GK+     V +++  N + + +  +     GE A+LIR+ +  A D     + 
Sbjct: 172 LYGPPGTGKTLLARAVASQLDCNFLKVVSSSIVDKYIGESARLIREMFNYARD----HQP 227

Query: 556 CCLFINDLDAGAG 594
           C +F++++DA  G
Sbjct: 228 CIIFMDEIDAIGG 240
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>VPS4_YEAST (P52917) Vacuolar protein sorting-associated protein VPS4 (END13|
           protein) (DOA4-independent degradation protein 6)
          Length = 437

 Score = 35.0 bits (79), Expect = 0.16
 Identities = 21/73 (28%), Positives = 38/73 (52%)
 Frame = +1

Query: 376 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
           ++G  G GKS+  + V  +       +S+ +L S   GE  KL++Q +     M ++ K 
Sbjct: 171 LYGPPGTGKSYLAKAVATEANSTFFSVSSSDLVSKWMGESEKLVKQLFA----MARENKP 226

Query: 556 CCLFINDLDAGAG 594
             +FI+++DA  G
Sbjct: 227 SIIFIDEVDALTG 239
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>SPAST_HUMAN (Q9UBP0) Spastin|
          Length = 616

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
 Frame = +1

Query: 322 SLQNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELE 474
           +LQ  + LP+++  L  G+         +G  G GK+   + V A+       +SA  L 
Sbjct: 353 ALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLT 412

Query: 475 SGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDA 585
           S   GE  KL+R  +  A ++    +   +FI+++D+
Sbjct: 413 SKYVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 445
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>SPAST_MOUSE (Q9QYY8) Spastin|
          Length = 614

 Score = 34.7 bits (78), Expect = 0.21
 Identities = 25/97 (25%), Positives = 46/97 (47%), Gaps = 9/97 (9%)
 Frame = +1

Query: 322 SLQNFMTLPNIKIPLILGI---------WGGKGQGKSFQCELVFAKMGINPIMMSAGELE 474
           +LQ  + LP+++  L  G+         +G  G GK+   + V A+       +SA  L 
Sbjct: 351 ALQEIVILPSLRPELFTGLRAPARGLLLFGPPGNGKTMLAKAVAAESNATFFNISAASLT 410

Query: 475 SGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDA 585
           S   GE  KL+R  +  A ++    +   +FI+++D+
Sbjct: 411 SKYVGEGEKLVRALFAVAREL----QPSIIFIDEVDS 443
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>KAD5_MOUSE (Q920P5) Adenylate kinase isoenzyme 5 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase)
          Length = 193

 Score = 34.3 bits (77), Expect = 0.28
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 3/79 (3%)
 Frame = +1

Query: 367 ILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYREAADM 537
           I+ + GG G GK  QCE +  K G     +S GEL   E  +  E +KLIR    E  D+
Sbjct: 9   IIFLMGGPGSGKGTQCEKLAEKYGFT--HLSTGELLRQELTSESERSKLIRD-IMERGDL 65

Query: 538 IKKGKMCCLFINDLDAGAG 594
           +  G +  L    + A  G
Sbjct: 66  VPSGVVLELLKEAMVASLG 84
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>PSMR_METMP (Q6LWR0) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 407

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 20/72 (27%), Positives = 37/72 (51%)
 Frame = +1

Query: 376 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
           ++G  G GK+   + V  +   + + +   EL     GE AKL+R  ++    + K+   
Sbjct: 187 LYGPPGTGKTLLAKAVAYETNASFVRVVGSELVKKFIGEGAKLVRDVFK----LAKEKSP 242

Query: 556 CCLFINDLDAGA 591
           C +FI+++DA A
Sbjct: 243 CIIFIDEIDAVA 254
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>PRS7_SCHPO (O42931) 26S protease regulatory subunit 7 homolog|
          Length = 438

 Score = 33.9 bits (76), Expect = 0.36
 Identities = 24/91 (26%), Positives = 43/91 (47%)
 Frame = +1

Query: 322 SLQNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAK 501
           S + F+ L  I  P  + ++G  G GK+     V  +     I +   EL     GE A+
Sbjct: 201 SPERFVKL-GIDPPKGIMLYGPPGTGKTLCARAVANRTDATFIRVIGSELVQKYVGEGAR 259

Query: 502 LIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           ++R+ +    +M +  K C +F +++DA  G
Sbjct: 260 MVRELF----EMARTKKACIIFFDEIDAIGG 286
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>NVL_MOUSE (Q9DBY8) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 855

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = +1

Query: 382 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 561
           G  G GK+   + V  + G+N I +   EL +   GE  + +RQ ++ A    K    C 
Sbjct: 621 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 676

Query: 562 LFINDLDA 585
           +F +++DA
Sbjct: 677 IFFDEVDA 684



 Score = 33.5 bits (75), Expect = 0.48
 Identities = 19/68 (27%), Positives = 34/68 (50%)
 Frame = +1

Query: 382 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 561
           G  G GK+     +  ++ +  + ++A E+ SG +GE      Q+ RE  D       C 
Sbjct: 304 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGES----EQKLRELFDQAVSNAPCI 359

Query: 562 LFINDLDA 585
           +FI+++DA
Sbjct: 360 VFIDEIDA 367
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>NVL_HUMAN (O15381) Nuclear valosin-containing protein-like (Nuclear VCP-like|
           protein) (NVLp)
          Length = 856

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = +1

Query: 382 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 561
           G  G GK+   + V  + G+N I +   EL +   GE  + +RQ ++ A    K    C 
Sbjct: 622 GPPGCGKTLLAKAVANESGLNFISVKGPELLNMYVGESERAVRQVFQRA----KNSAPCV 677

Query: 562 LFINDLDA 585
           +F +++DA
Sbjct: 678 IFFDEVDA 685



 Score = 33.1 bits (74), Expect = 0.62
 Identities = 17/68 (25%), Positives = 36/68 (52%)
 Frame = +1

Query: 382 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 561
           G  G GK+     +  ++ +  + ++A E+ SG +GE  + +R+ + +A         C 
Sbjct: 305 GPPGCGKTLLAHAIAGELDLPILKVAAPEIVSGVSGESEQKLRELFEQAV----SNAPCI 360

Query: 562 LFINDLDA 585
           +FI+++DA
Sbjct: 361 IFIDEIDA 368
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>RIX7_YEAST (Q07844) Ribosome biogenesis ATPase RIX7|
          Length = 837

 Score = 33.5 bits (75), Expect = 0.48
 Identities = 21/70 (30%), Positives = 33/70 (47%)
 Frame = +1

Query: 376 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
           +WG  G GK+   + V  +   N I +   EL +   GE  + IRQ +  A   +     
Sbjct: 572 LWGPPGCGKTLLAKAVANESRANFISIKGPELLNKYVGESERSIRQVFTRARASVP---- 627

Query: 556 CCLFINDLDA 585
           C +F ++LDA
Sbjct: 628 CVIFFDELDA 637



 Score = 31.6 bits (70), Expect = 1.8
 Identities = 20/68 (29%), Positives = 34/68 (50%)
 Frame = +1

Query: 382 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 561
           G  G GK+     +  ++ +  I +SA  + SG +GE  K IR  + EA  +      C 
Sbjct: 246 GPPGCGKTSIANALAGELQVPFISISAPSVVSGMSGESEKKIRDLFDEARSLAP----CL 301

Query: 562 LFINDLDA 585
           +F +++DA
Sbjct: 302 VFFDEIDA 309
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>PRS7_CAEEL (Q18787) Probable 26S protease regulatory subunit 7|
          Length = 435

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 19/73 (26%), Positives = 35/73 (47%)
 Frame = +1

Query: 376 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
           ++G  G GK+     V  +     I +   EL     GE A+++R+ +    +M +  K 
Sbjct: 216 LYGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMVRELF----EMARTKKA 271

Query: 556 CCLFINDLDAGAG 594
           C +F +++DA  G
Sbjct: 272 CLIFFDEIDAVGG 284
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>FTSH_GUITH (O78516) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 631

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 21/82 (25%), Positives = 38/82 (46%)
 Frame = +1

Query: 340 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 519
           T    KIP  + + G  G GK+   + +  + G+    +S  E      G  A  +R  +
Sbjct: 199 TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 258

Query: 520 REAADMIKKGKMCCLFINDLDA 585
           ++A    K+   C +FI+++DA
Sbjct: 259 KKA----KENSPCIVFIDEIDA 276
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>YME1_YEAST (P32795) Protein YME1 (EC 3.4.24.-) (TAT-binding homolog 11) (OSD1|
           protein)
          Length = 747

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 22/80 (27%), Positives = 36/80 (45%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           K+P  + + G  G GK+        + G++   MS  E +    G  AK IR  + +A  
Sbjct: 312 KLPKGVLLTGPPGTGKTLLARATAGEAGVDFFFMSGSEFDEVYVGVGAKRIRDLFAQA-- 369

Query: 535 MIKKGKMCCLFINDLDAGAG 594
             +      +FI++LDA  G
Sbjct: 370 --RSRAPAIIFIDELDAIGG 387
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>PSMR2_HALSA (Q9HRW6) Proteasome-activating nucleotidase 2 (Proteasome|
           regulatory subunit 2)
          Length = 407

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 21/68 (30%), Positives = 35/68 (51%)
 Frame = +1

Query: 382 GGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCC 561
           G  G GK+   + V ++   + I M+  EL     GE AKL+R  ++ A D     +   
Sbjct: 190 GPPGTGKTLMAKAVASQTDASFIKMAGSELVHKFIGEGAKLVRDLFQVARD----HEPAV 245

Query: 562 LFINDLDA 585
           +FI+++DA
Sbjct: 246 VFIDEIDA 253
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>TERA_XENLA (P23787) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit)
          Length = 805

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 235 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 293

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI++LDA
Sbjct: 294 ---EKNAPAIIFIDELDA 308
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>TERA_RAT (P46462) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI++LDA
Sbjct: 293 ---EKNAPAIIFIDELDA 307
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>TERA_PIG (P03974) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI++LDA
Sbjct: 293 ---EKNAPAIIFIDELDA 307
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>TERA_MOUSE (Q01853) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI++LDA
Sbjct: 293 ---EKNAPAIIFIDELDA 307
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>TERA_HUMAN (P55072) Transitional endoplasmic reticulum ATPase (TER ATPase)|
           (15S Mg(2+)-ATPase p97 subunit) (Valosin-containing
           protein) (VCP)
          Length = 805

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 22/78 (28%), Positives = 39/78 (50%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 234 VKPPRGILLYGPPGTGKTLIARAVANETGAFFFLINGPEIMSKLAGESESNLRKAFEEA- 292

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI++LDA
Sbjct: 293 ---EKNAPAIIFIDELDA 307
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>YMEL1_HUMAN (Q96TA2) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4) (Presenilin-associated metalloprotease)
           (PAMP)
          Length = 773

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 23/80 (28%), Positives = 35/80 (43%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           K+P  + + G  G GK+     V  +  +     S  E +    G  A  IR  +REA  
Sbjct: 370 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 427

Query: 535 MIKKGKMCCLFINDLDAGAG 594
             K    C +FI++LD+  G
Sbjct: 428 --KANAPCVIFIDELDSVGG 445
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>FTSH_MYCTU (P0A4V8) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + ++G  G GK+     V  + G+    +S  +      G  A  +R  + +A  
Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251

Query: 535 MIKKGKMCCLFINDLDA 585
             K+   C +F++++DA
Sbjct: 252 --KQNSPCIIFVDEIDA 266
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>FTSH_MYCBO (P0A4V9) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 760

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 19/77 (24%), Positives = 36/77 (46%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + ++G  G GK+     V  + G+    +S  +      G  A  +R  + +A  
Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGASRVRDLFEQA-- 251

Query: 535 MIKKGKMCCLFINDLDA 585
             K+   C +F++++DA
Sbjct: 252 --KQNSPCIIFVDEIDA 266
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>YMEL1_RAT (Q925S8) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1) (Meg-4)
          Length = 715

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 23/80 (28%), Positives = 35/80 (43%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           K+P  + + G  G GK+     V  +  +     S  E +    G  A  IR  +REA  
Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369

Query: 535 MIKKGKMCCLFINDLDAGAG 594
             K    C +FI++LD+  G
Sbjct: 370 --KANAPCVIFIDELDSVGG 387
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>YMEL1_MOUSE (O88967) ATP-dependent metalloprotease YME1L1 (EC 3.4.24.-)|
           (YME1-like protein 1) (ATP-dependent metalloprotease
           FtsH1)
          Length = 715

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 23/80 (28%), Positives = 35/80 (43%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           K+P  + + G  G GK+     V  +  +     S  E +    G  A  IR  +REA  
Sbjct: 312 KLPKGILLVGPPGTGKTLLARAVAGEADVPFYYASGSEFDEMFVGVGASRIRNLFREA-- 369

Query: 535 MIKKGKMCCLFINDLDAGAG 594
             K    C +FI++LD+  G
Sbjct: 370 --KANAPCVIFIDELDSVGG 387
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>PRS6A_ORYSA (P46465) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 429

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 20/78 (25%), Positives = 39/78 (50%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           I+ P  + ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A 
Sbjct: 207 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 262

Query: 532 DMIKKGKMCCLFINDLDA 585
            + K+   C +FI+++DA
Sbjct: 263 QLAKEKSPCIIFIDEIDA 280
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>FTSH_MYCLE (Q9CD58) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 787

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 20/77 (25%), Positives = 35/77 (45%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + ++G  G GK+     V  + G+    +S  +      G  A     R R+  D
Sbjct: 194 KIPKGVLLYGPPGTGKTLLARAVAGEAGVPFFTISGSDFVEMFVGVGA----SRVRDLFD 249

Query: 535 MIKKGKMCCLFINDLDA 585
             K+   C +F++++DA
Sbjct: 250 QAKQNSPCIIFVDEIDA 266
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>FTSH1_SYNY3 (Q55700) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 627

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 21/82 (25%), Positives = 38/82 (46%)
 Frame = +1

Query: 340 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 519
           T    KIP  + + G  G GK+   + +  + G+    +S  E      G  A  +R  +
Sbjct: 198 TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 257

Query: 520 REAADMIKKGKMCCLFINDLDA 585
           ++A    K+   C +FI+++DA
Sbjct: 258 KKA----KENAPCLIFIDEIDA 275
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>CDC48_SCHPO (Q9P3A7) Cell division cycle protein 48|
          Length = 815

 Score = 32.7 bits (73), Expect = 0.81
 Identities = 21/78 (26%), Positives = 39/78 (50%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           IK P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 255 IKPPRGILMYGPPGTGKTLMARAVANETGAFFFLINGPEIMSKMAGESESNLRKAFEEA- 313

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI+++D+
Sbjct: 314 ---EKNSPAIIFIDEIDS 328
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>RECA_IDILO (Q5QUB8) Protein recA (Recombinase A)|
          Length = 372

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 16/54 (29%), Positives = 26/54 (48%)
 Frame = +1

Query: 418 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 579
           +V +   + P     GE+   + G  A+L+ Q  R+    IKK    C+FIN +
Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTSNIKKSNTMCIFINQI 194
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>PRS7_MOUSE (P46471) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 23/89 (25%), Positives = 43/89 (48%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           + F+ L  I+ P  + ++G  G GK+     V  +     I +   EL     GE A+++
Sbjct: 198 ERFVNL-GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMV 256

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           R+ +    +M +  K C +F +++DA  G
Sbjct: 257 RELF----EMARTKKACLIFFDEIDAIGG 281
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>PRS7_HUMAN (P35998) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 23/89 (25%), Positives = 43/89 (48%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           + F+ L  I+ P  + ++G  G GK+     V  +     I +   EL     GE A+++
Sbjct: 198 ERFVNL-GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMV 256

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           R+ +    +M +  K C +F +++DA  G
Sbjct: 257 RELF----EMARTKKACLIFFDEIDAIGG 281
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>PRS7_XENLA (P46472) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 433

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 23/89 (25%), Positives = 43/89 (48%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           + F+ L  I+ P  + ++G  G GK+     V  +     I +   EL     GE A+++
Sbjct: 199 ERFVNL-GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIRVIGSELVQKYVGEGARMV 257

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           R+ +    +M +  K C +F +++DA  G
Sbjct: 258 RELF----EMARTKKACLIFFDEIDAIGG 282
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>FTSH3_SYNY3 (P73437) Cell division protein ftsH homolog 3 (EC 3.4.24.-)|
          Length = 628

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + + G  G GK+   +    + G+   ++S  E      G  A  +R  + +A  
Sbjct: 205 KIPKGVLLVGPPGTGKTLLAKAAAGEAGVPFFIISGSEFVELFVGAGAARVRDLFEQA-- 262

Query: 535 MIKKGKMCCLFINDLDA 585
             KK   C +FI++LDA
Sbjct: 263 --KKQAPCIVFIDELDA 277
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>PRS6A_LYCES (P54776) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1) (Mg(2+)-dependent ATPase 1)
           (LEMA-1)
          Length = 423

 Score = 32.3 bits (72), Expect = 1.1
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +1

Query: 376 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
           ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A  + K+   
Sbjct: 209 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKSP 264

Query: 556 CCLFINDLDA 585
           C +FI+++DA
Sbjct: 265 CIIFIDEIDA 274
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>PRS6A_BRACM (O23894) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 424

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 18/70 (25%), Positives = 35/70 (50%)
 Frame = +1

Query: 376 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
           ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A  + K+   
Sbjct: 210 LYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAFQLAKEKAP 265

Query: 556 CCLFINDLDA 585
           C +FI+++DA
Sbjct: 266 CIIFIDEIDA 275
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>KCY_MOUSE (Q9DBP5) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 361 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 537
           PL++ + GG G GK  QC  +  K G     +SAGEL       P      +Y E  +  
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56

Query: 538 IKKGKM 555
           IK+GK+
Sbjct: 57  IKEGKI 62
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>KCY_HUMAN (P30085) UMP-CMP kinase (EC 2.7.4.14) (Cytidylate kinase)|
           (Deoxycytidylate kinase) (Cytidine monophosphate kinase)
           (Uridine monophosphate/cytidine monophosphate kinase)
           (UMP/CMP kinase) (UMP/CMPK) (Uridine monophosphate
           kinase)
          Length = 196

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/66 (34%), Positives = 32/66 (48%), Gaps = 1/66 (1%)
 Frame = +1

Query: 361 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD-M 537
           PL++ + GG G GK  QC  +  K G     +SAGEL       P      +Y E  +  
Sbjct: 3   PLVVFVLGGPGAGKGTQCARIVEKYGYT--HLSAGELLRDERKNP----DSQYGELIEKY 56

Query: 538 IKKGKM 555
           IK+GK+
Sbjct: 57  IKEGKI 62
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>FTSH2_SYNY3 (P73179) Cell division protein ftsH homolog 2 (EC 3.4.24.-)|
          Length = 665

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 20/77 (25%), Positives = 37/77 (48%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + + G  G GK+   + +  + G+    +S  E      G  A  +R  +++A  
Sbjct: 242 KIPRGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKA-- 299

Query: 535 MIKKGKMCCLFINDLDA 585
             K+   C +FI+++DA
Sbjct: 300 --KENAPCLVFIDEIDA 314
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>PRS7_RAT (Q63347) 26S protease regulatory subunit 7 (MSS1 protein)|
          Length = 432

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 23/89 (25%), Positives = 43/89 (48%)
 Frame = +1

Query: 328 QNFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLI 507
           + F+ L  I+ P  + ++G  G GK+     V  +     I +   EL     GE A+++
Sbjct: 198 ERFVNL-GIEPPKGVLLFGPPGTGKTLCARAVANRTDACFIPVIGSELVQKYVGEGARMV 256

Query: 508 RQRYREAADMIKKGKMCCLFINDLDAGAG 594
           R+ +    +M +  K C +F +++DA  G
Sbjct: 257 RELF----EMARTKKACLIFFDEIDAIGG 281
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>FTSH_PORPU (P51327) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 628

 Score = 32.0 bits (71), Expect = 1.4
 Identities = 21/82 (25%), Positives = 37/82 (45%)
 Frame = +1

Query: 340 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 519
           T    KIP  + + G  G GK+   + +  + G+    +S  E      G  A  +R  +
Sbjct: 199 TAVGAKIPKGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLF 258

Query: 520 REAADMIKKGKMCCLFINDLDA 585
           ++A D       C +FI+++DA
Sbjct: 259 KKAKD----NAPCIVFIDEIDA 276
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>CDC48_YEAST (P25694) Cell division control protein 48|
          Length = 835

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 21/78 (26%), Positives = 39/78 (50%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           IK P  + ++G  G GK+     V  + G    +++  E+ S  AGE    +R+ + EA 
Sbjct: 245 IKPPRGVLMYGPPGTGKTLMARAVANETGAFFFLINGPEVMSKMAGESESNLRKAFEEA- 303

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI+++D+
Sbjct: 304 ---EKNAPAIIFIDEIDS 318
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>CDCH_HALSA (Q9HPF0) Protein cdcH|
          Length = 742

 Score = 31.6 bits (70), Expect = 1.8
 Identities = 22/82 (26%), Positives = 39/82 (47%)
 Frame = +1

Query: 340 TLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRY 519
           T   ++ P  + ++G  G GK+   + V  +   N I +   +L S   GE  K IRQ +
Sbjct: 489 TRMGVEPPAGVLLYGPPGTGKTLMAKAVANETNANFISVRGPQLLSKWVGESEKAIRQTF 548

Query: 520 REAADMIKKGKMCCLFINDLDA 585
           R+A  +        +F ++LD+
Sbjct: 549 RKARQVAP----TVIFFDELDS 566
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>PCRB_SULAC (Q4JAS3) Protein pcrB homolog|
          Length = 257

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 17/59 (28%), Positives = 31/59 (52%)
 Frame = -1

Query: 286 VEASHGVVEVVLPQALADVLVGAEDGLVGAVARGRLEERVHDALPSGDVLLVVGDIVRK 110
           +EA  G  E V P+A+  V    +DG+V        EER  + + +G  ++V G+++ +
Sbjct: 176 LEAGSGASETVKPEAIKVVKNTVKDGVVIVGGGVTSEERARNLVLAGADIIVTGNVIER 234
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>FTSH4_SYNY3 (P72991) Cell division protein ftsH homolog 4 (EC 3.4.24.-)|
          Length = 616

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 21/77 (27%), Positives = 35/77 (45%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + + G  G GK+   + V  + G+    +S  E      G  A  +R  + +A  
Sbjct: 192 KIPKGVLLVGPPGTGKTLLAKAVAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFEQA-- 249

Query: 535 MIKKGKMCCLFINDLDA 585
             K    C +FI+++DA
Sbjct: 250 --KANAPCIVFIDEIDA 264
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>PEX1_PICPA (P46463) Peroxisome biosynthesis protein PAS1 (Peroxin-1)|
          Length = 1157

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/70 (25%), Positives = 34/70 (48%)
 Frame = +1

Query: 376  IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
            ++G  G GK+     V A+ G+N I +   E+ +   G   + +R+ +  A    +  K 
Sbjct: 838  LYGYPGCGKTLLASAVAAQCGLNFISIKGPEILNKYIGPSEQSVRELFERA----QAAKP 893

Query: 556  CCLFINDLDA 585
            C LF ++ D+
Sbjct: 894  CILFFDEFDS 903
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>PTR2_CANAL (P46030) Peptide transporter PTR2|
          Length = 623

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 18/59 (30%), Positives = 29/59 (49%), Gaps = 10/59 (16%)
 Frame = -2

Query: 198 PSPVGAWKSESTMPFPLVMSCW----SSEISYAR------PFHLSVFLFSSMFSAAMTV 52
           P+P+ AWK+ S         CW    + E++Y R          ++FL  S FSAA+++
Sbjct: 488 PAPITAWKASSLFILAAAGECWAYTTAYELAYTRSPPALKSLVYALFLVMSAFSAALSL 546
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>PRS6A_ARATH (O04019) 26S protease regulatory subunit 6A homolog (TAT-binding|
           protein homolog 1) (TBP-1)
          Length = 419

 Score = 31.2 bits (69), Expect = 2.4
 Identities = 20/78 (25%), Positives = 39/78 (50%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           I+ P  + ++G  G GK+       A+     + ++  +L     G+ AKL+    R+A 
Sbjct: 197 IRPPKGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLV----RDAF 252

Query: 532 DMIKKGKMCCLFINDLDA 585
            + K+   C +FI+++DA
Sbjct: 253 LLAKEKSPCIIFIDEIDA 270
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>YCF46_ODOSI (P49541) Hypothetical 56.9 kDa protein ycf46 (ORF497)|
          Length = 497

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 21/80 (26%), Positives = 38/80 (47%)
 Frame = +1

Query: 343 LPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYR 522
           LP  +  L++GI   +G GKS   + +  +  +  + +  G L  G  GE       R R
Sbjct: 256 LPTPRGLLLIGI---QGTGKSLTAKAIATEWQLPLLKLDVGRLFGGIVGES----ESRLR 308

Query: 523 EAADMIKKGKMCCLFINDLD 582
           +  D+ +    C L+I+++D
Sbjct: 309 QMIDVAETLSPCILWIDEMD 328
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>RPK1_IPONI (P93194) Receptor-like protein kinase precursor (EC 2.7.11.1)|
          Length = 1109

 Score = 30.8 bits (68), Expect = 3.1
 Identities = 15/43 (34%), Positives = 25/43 (58%), Gaps = 1/43 (2%)
 Frame = -2

Query: 531 CSLTVPLPDELGWLSSVPTLQLSGTHHDG-VDAHLGEHKLTLE 406
           C+L+ P+P   G L+ + TL L+G H  G +   LG+ K  ++
Sbjct: 294 CALSGPIPSCFGQLTKLDTLYLAGNHFSGRIPPELGKCKSMID 336
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>TERA1_CAEEL (P54811) Transitional endoplasmic reticulum ATPase homolog 1|
           (p97/CDC48 homolog 1)
          Length = 809

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 21/78 (26%), Positives = 39/78 (50%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           IK P  + ++G  G GK+     V  + G    +++  E+ S  +GE    +R+ + E  
Sbjct: 241 IKPPRGILLFGPPGTGKTLIARAVANETGSFFFLINGPEVMSKMSGESESNLRKAFEEC- 299

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K +   LFI+++DA
Sbjct: 300 ---EKNQPAILFIDEIDA 314
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>RECA_GEOSL (P62215) Protein recA (Recombinase A)|
          Length = 338

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 579
           GE+   + G  A+L+ Q  R+   +I K   C +FIN +
Sbjct: 157 GEMGDSHMGLQARLMSQALRKLTGIISKSNCCVIFINQI 195
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>FTSH_BACPF (P94304) Cell division protein ftsH homolog (EC 3.4.24.-)|
          Length = 679

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/77 (25%), Positives = 34/77 (44%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           +IP  + + G  G GK+     V  + G+    +S  +      G  A  +R  +  A  
Sbjct: 197 RIPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENA-- 254

Query: 535 MIKKGKMCCLFINDLDA 585
             KK   C +FI+++DA
Sbjct: 255 --KKNAPCIIFIDEIDA 269
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>KADC2_ARATH (Q9FIJ7) Probable adenylate kinase 2, chloroplast precursor (EC|
           2.7.4.3) (ATP-AMP transphosphorylase)
          Length = 283

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 20/65 (30%), Positives = 33/65 (50%)
 Frame = +1

Query: 361 PLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMI 540
           PL + I G    GK  QCEL+  K G+  + +SAG+L        +    +  R A + +
Sbjct: 64  PLKIMISGAPASGKGTQCELITHKYGL--VHISAGDLLRAEIASGS----ENGRRAKEHM 117

Query: 541 KKGKM 555
           +KG++
Sbjct: 118 EKGQL 122
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>UMPK_ARATH (O04905) Uridylate kinase (EC 2.7.4.-) (UK) (Uridine monophosphate|
           kinase) (UMP kinase) (UMP/CMP kinase)
          Length = 202

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/70 (31%), Positives = 34/70 (48%), Gaps = 3/70 (4%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL---ESGNAGEPAKLIRQRYRE 525
           K P ++ + GG G GK  QC  +    G     +SAG+L   E  +  E   +I+     
Sbjct: 12  KKPTVIFVLGGPGSGKGTQCAYIVEHYGYT--HLSAGDLLRAEIKSGSENGTMIQ----- 64

Query: 526 AADMIKKGKM 555
             +MIK+GK+
Sbjct: 65  --NMIKEGKI 72
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>RECA_CHRVI (O32377) Protein recA (Recombinase A)|
          Length = 347

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 579
           GE+   + G  A+L+ Q  R+    IK+   C +FIN +
Sbjct: 157 GEMGDSHVGLQARLMSQALRKLTGNIKRSNCCVIFINQI 195
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>PRS6A_YEAST (P33297) 26S protease regulatory subunit 6A (TAT-binding protein|
           homolog 1) (TBP-1)
          Length = 434

 Score = 30.4 bits (67), Expect = 4.0
 Identities = 22/78 (28%), Positives = 38/78 (48%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           I+ P    ++G  G GK+       A+     + ++A +L     GE AKL+    R+A 
Sbjct: 212 IRAPKGALMYGPPGTGKTLLARACAAQTNATFLKLAAPQLVQMYIGEGAKLV----RDAF 267

Query: 532 DMIKKGKMCCLFINDLDA 585
            + K+     +FI++LDA
Sbjct: 268 ALAKEKAPTIIFIDELDA 285
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>RECA2_MYXXA (P48292) Protein recA 2 (Recombinase A 2)|
          Length = 358

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 13/39 (33%), Positives = 21/39 (53%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 579
           GE+   + G  A+L+ Q  R+    I K + C +FIN +
Sbjct: 160 GEMGDAHMGVQARLMSQALRKLTGTIAKSQTCVIFINQI 198
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>RECA_LISMO (Q9L723) Protein recA (Recombinase A)|
          Length = 348

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+ + +I K K   +FIN +    G
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVG 198
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>RECA_LISMF (Q71ZS2) Protein recA (Recombinase A)|
          Length = 348

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+ + +I K K   +FIN +    G
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVG 198
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>RECA_LISIN (Q92BV7) Protein recA (Recombinase A)|
          Length = 348

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/44 (31%), Positives = 23/44 (52%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+ + +I K K   +FIN +    G
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVG 198
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>KAD1_HUMAN (P00568) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase) (AK1) (Myokinase)
          Length = 194

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 522
           +K   I+ + GG G GK  QCE +  K G   +    +   E+ SG+A         R +
Sbjct: 5   LKKTKIIFVVGGPGSGKGTQCEKIVQKYGYTHLSTGDLLRSEVSSGSA---------RGK 55

Query: 523 EAADMIKKGKM 555
           + +++++KG++
Sbjct: 56  KLSEIMEKGQL 66
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>RECA_CHLTE (O52393) Protein recA (Recombinase A)|
          Length = 346

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 15/39 (38%), Positives = 19/39 (48%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 579
           GE+     G  A+L+ Q  R+    I K    CLFIN L
Sbjct: 170 GEMGDSVVGLQARLMSQALRKLTGAISKSSSVCLFINQL 208
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>RECA_PORGI (P77925) Protein recA (Recombinase A)|
          Length = 340

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 14/39 (35%), Positives = 19/39 (48%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 579
           GE+     G  A+L+ Q  R+    I K    C+FIN L
Sbjct: 165 GEMGDNKVGLHARLMSQALRKMTGAISKSNTTCIFINQL 203
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>COAE_CHLTE (Q8KD46) Dephospho-CoA kinase (EC 2.7.1.24) (Dephosphocoenzyme A|
           kinase)
          Length = 208

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 13/28 (46%), Positives = 21/28 (75%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMG 438
           ++PL++G+ GG G GKS  C ++ A+MG
Sbjct: 4   RLPLLVGVTGGIGSGKSTVCAML-AEMG 30
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>TERA2_CAEEL (P54812) Transitional endoplasmic reticulum ATPase homolog 2|
           (p97/CDC48 homolog 2)
          Length = 810

 Score = 30.0 bits (66), Expect = 5.3
 Identities = 20/78 (25%), Positives = 38/78 (48%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  + ++G  G GK+     V  + G    +++  E+ S  +GE    +R+ + E  
Sbjct: 240 VKPPRGILLFGPPGTGKTLIARAVANETGAFFFLINGPEIMSKMSGESESNLRKAFAEC- 298

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     LFI+++DA
Sbjct: 299 ---EKNSPAILFIDEIDA 313
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>CD48A_ARATH (P54609) Cell division control protein 48 homolog A (AtCDC48a)|
          Length = 809

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/78 (25%), Positives = 38/78 (48%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  + ++G  G GK+     V  + G     ++  E+ S  AGE    +R+ + EA 
Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI+++D+
Sbjct: 297 ---EKNAPSIIFIDEIDS 311
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>CDC48_CAPAN (Q96372) Cell division cycle protein 48 homolog|
          Length = 805

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/78 (25%), Positives = 38/78 (48%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  + ++G  G GK+     V  + G     ++  E+ S  AGE    +R+ + EA 
Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI+++D+
Sbjct: 298 ---EKNAPSIIFIDEIDS 312
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>KAD1_RABIT (P00569) Adenylate kinase isoenzyme 1 (EC 2.7.4.3) (ATP-AMP|
           transphosphorylase) (AK1) (Myokinase)
          Length = 194

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 19/71 (26%), Positives = 36/71 (50%), Gaps = 3/71 (4%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIM---MSAGELESGNAGEPAKLIRQRYR 522
           +K   I+ + GG G GK  QCE +  K G   +    +   E+ SG+A         R +
Sbjct: 5   LKKAKIIFVVGGPGSGKGTQCEKIVHKYGYTHLSTGDLLRAEVSSGSA---------RGK 55

Query: 523 EAADMIKKGKM 555
           + +++++KG++
Sbjct: 56  KLSEIMEKGQL 66
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>KAD1_CAEEL (Q20140) Probable adenylate kinase isoenzyme F38B2.4 (EC 2.7.4.3)|
           (ATP-AMP transphosphorylase)
          Length = 210

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 17/47 (36%), Positives = 25/47 (53%)
 Frame = +1

Query: 331 NFMTLPNIKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGEL 471
           N   L    +P+   I GG G GK  QC+ + AK G+    +S+G+L
Sbjct: 11  NLAPLKAAGVPIFF-IVGGPGSGKGTQCDKIVAKYGLT--HLSSGDL 54
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>RECA_CLOAB (P58254) Protein recA (Recombinase A)|
          Length = 349

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+    I K K   +FIN L    G
Sbjct: 156 GEMGDSHVGLQARLMSQALRKLTGSINKSKCIAIFINQLREKVG 199
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>RECA_ACHLA (P29225) Protein recA (Recombinase A)|
          Length = 331

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 12/45 (26%), Positives = 25/45 (55%)
 Frame = +1

Query: 460 AGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           AG++ + + G  A+++ Q  R+ + +I K  +  +FIN +    G
Sbjct: 156 AGDMSANHVGLQARMMSQAMRKMSGVISKSNVVAIFINQIREKVG 200
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>RECA_AERSA (P94190) Protein recA (Recombinase A)|
          Length = 353

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 15/54 (27%), Positives = 25/54 (46%)
 Frame = +1

Query: 418 LVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDL 579
           +V +   + P     GE+   + G  A+L+ Q  R+    IK     C+FIN +
Sbjct: 141 IVDSVAALTPKAEIEGEMGDSHVGLQARLMSQALRKLTANIKNANCLCIFINQI 194
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>CDC48_SOYBN (P54774) Cell division cycle protein 48 homolog (Valosin-containing|
           protein homolog) (VCP)
          Length = 807

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/78 (25%), Positives = 38/78 (48%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  + ++G  G GK+     V  + G     ++  E+ S  AGE    +R+ + EA 
Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI+++D+
Sbjct: 298 ---EKNAPSIIFIDEIDS 312
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>CD48D_ARATH (Q9SCN8) Putative cell division control protein 48 homolog D|
           (AtCDC48d) (Transitional endoplasmic reticulum ATPase D)
          Length = 815

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/78 (25%), Positives = 38/78 (48%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  + ++G  G GK+     V  + G     ++  E+ S  AGE    +R+ + EA 
Sbjct: 239 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 297

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI+++D+
Sbjct: 298 ---EKNAPSIIFIDEIDS 312
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>CD48E_ARATH (Q9LZF6) Cell division control protein 48 homolog E (AtCDC48e)|
           (Transitional endoplasmic reticulum ATPase E)
          Length = 810

 Score = 29.6 bits (65), Expect = 6.9
 Identities = 20/78 (25%), Positives = 38/78 (48%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P  + ++G  G GK+     V  + G     ++  E+ S  AGE    +R+ + EA 
Sbjct: 238 VKPPKGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEA- 296

Query: 532 DMIKKGKMCCLFINDLDA 585
              +K     +FI+++D+
Sbjct: 297 ---EKNAPSIIFIDEIDS 311
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>RECA_LISWE (Q83TH3) Protein recA (Recombinase A)|
          Length = 348

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVG 198
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>RECA_LISSE (Q83TH4) Protein recA (Recombinase A)|
          Length = 348

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVG 198
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>RECA_LISIV (Q83TH2) Protein recA (Recombinase A)|
          Length = 348

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G
Sbjct: 155 GEMGDAHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVG 198
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>RECA1_LACLA (Q01840) Protein recA, chromosomal (Recombinase A)|
          Length = 387

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+++ Q  R+ A  I K K   +FIN L    G
Sbjct: 171 GEIGDSSVGLQARMMSQAMRKLAGHINKTKTTAIFINQLREKVG 214
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>FTSH1_HAEIN (P71377) Cell division protein ftsH homolog 1 (EC 3.4.24.-)|
          Length = 635

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/77 (24%), Positives = 34/77 (44%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + + G  G GK+     +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 182 KIPKGILMVGPPGTGKTLLARAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 239

Query: 535 MIKKGKMCCLFINDLDA 585
             KK   C +FI+++DA
Sbjct: 240 --KKNAPCLIFIDEIDA 254
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>RECA_THETN (Q8RA55) Protein recA (Recombinase A)|
          Length = 342

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+ A +  K K   +FIN L    G
Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGVTSKSKSIVVFINQLREKVG 199
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>PRS6A_SCHPO (O14126) 26S protease regulatory subunit 6A|
          Length = 438

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 21/78 (26%), Positives = 38/78 (48%)
 Frame = +1

Query: 352 IKIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAA 531
           +K P    ++G  G GK+       A+     + ++A +L     G+ AKL+    R+A 
Sbjct: 216 VKPPKGCLMFGPPGTGKTLLARACAAQSNATFLKLAAPQLVQMFIGDGAKLV----RDAF 271

Query: 532 DMIKKGKMCCLFINDLDA 585
            + K+     +FI++LDA
Sbjct: 272 ALAKEKSPAIIFIDELDA 289
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>RECA_BACHD (Q9KAA7) Protein recA (Recombinase A)|
          Length = 349

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G
Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVG 198
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>ALMS1_HUMAN (Q8TCU4) Alstrom syndrome protein 1|
          Length = 4167

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 22/77 (28%), Positives = 36/77 (46%)
 Frame = -2

Query: 243  PWLTYS*ELRTASWVPSPVGAWKSESTMPFPLVMSCWSSEISYARPFHLSVFLFSSMFSA 64
            PWL+   EL   ++VP     + S S MP P  M  +++ I+++   H      SS+   
Sbjct: 2677 PWLS---ELVEPAFVPPKEVDFHSSSQMPSPEPMKKFTTSITFSSHRHSKCISNSSVVKV 2733

Query: 63   AMTVNLLVLGAXCHGSS 13
             +T      G+ C G+S
Sbjct: 2734 GVTE-----GSQCTGAS 2745
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>UCK1_MOUSE (P52623) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine|
           monophosphokinase 1) (Cytidine monophosphokinase 1)
          Length = 277

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 361 PLILGIWGGKGQGKSFQCELVFAKMGINPI 450
           P ++G+ GG   GKS  CE +   +G N +
Sbjct: 23  PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52
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>UCK1_HUMAN (Q9HA47) Uridine-cytidine kinase 1 (EC 2.7.1.48) (UCK 1) (Uridine|
           monophosphokinase 1) (Cytidine monophosphokinase 1)
          Length = 277

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 11/30 (36%), Positives = 17/30 (56%)
 Frame = +1

Query: 361 PLILGIWGGKGQGKSFQCELVFAKMGINPI 450
           P ++G+ GG   GKS  CE +   +G N +
Sbjct: 23  PFLIGVSGGTASGKSTVCEKIMELLGQNEV 52
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>PTN13_MOUSE (Q64512) Tyrosine-protein phosphatase non-receptor type 13 (EC|
           3.1.3.48) (Protein tyrosine phosphatase PTP-BL)
           (Protein-tyrosine phosphatase RIP) (protein tyrosine
           phosphatase DPZPTP) (PTP36)
          Length = 2453

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 17/45 (37%), Positives = 22/45 (48%)
 Frame = +2

Query: 119 DISDDQQDITRGKGIVDSLFQAPTGDGTHEAVLSSYEYVSQGLRK 253
           D S   +D  RGKG+            THEA LS   +V++GL K
Sbjct: 195 DRSQAIRDRLRGKGLPTGRSSTSDALDTHEAPLSQQTFVNKGLSK 239
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>RECA_CLOTE (Q895I5) Protein recA (Recombinase A)|
          Length = 350

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+ A  I K     +FIN L    G
Sbjct: 156 GEMGDSHVGLQARLMSQALRKLAGSINKSNCVAIFINQLREKVG 199
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>RECA_BACSK (Q5WFX1) Protein recA (Recombinase A)|
          Length = 350

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G
Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTIAIFINQIREKVG 198
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>RECA_OCEIH (Q8CXG7) Protein recA (Recombinase A)|
          Length = 347

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 14/44 (31%), Positives = 22/44 (50%)
 Frame = +1

Query: 463 GELESGNAGEPAKLIRQRYREAADMIKKGKMCCLFINDLDAGAG 594
           GE+   + G  A+L+ Q  R+ +  I K K   +FIN +    G
Sbjct: 155 GEMGDSHVGLQARLMSQALRKLSGAINKSKTTAIFINQIREKVG 198
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>PSMR_METKA (Q8TX03) Proteasome-activating nucleotidase (Proteasome regulatory|
           subunit)
          Length = 436

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 18/70 (25%), Positives = 36/70 (51%)
 Frame = +1

Query: 376 IWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAADMIKKGKM 555
           ++G  G GK+   + V        I ++A EL     GE A+L+R+ +    ++ ++   
Sbjct: 218 LYGPPGTGKTLLAKAVANHADATFIRLAAPELVQKFIGEGARLVRELF----ELAREKAP 273

Query: 556 CCLFINDLDA 585
             +FI+++DA
Sbjct: 274 SIIFIDEIDA 283
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>FTSH_SHIFL (P0AAI4) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240

Query: 535 MIKKGKMCCLFINDLDA 585
             KK   C +FI+++DA
Sbjct: 241 --KKAAPCIIFIDEIDA 255
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>FTSH_SALTY (P63343) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240

Query: 535 MIKKGKMCCLFINDLDA 585
             KK   C +FI+++DA
Sbjct: 241 --KKAAPCIIFIDEIDA 255
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>FTSH_SALTI (P63344) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240

Query: 535 MIKKGKMCCLFINDLDA 585
             KK   C +FI+++DA
Sbjct: 241 --KKAAPCIIFIDEIDA 255
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>FTSH_ECOLI (P0AAI3) Cell division protein ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240

Query: 535 MIKKGKMCCLFINDLDA 585
             KK   C +FI+++DA
Sbjct: 241 --KKAAPCIIFIDEIDA 255
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>FTSH_ECO57 (Q8X9L0) Cell division protease ftsH (EC 3.4.24.-)|
          Length = 644

 Score = 29.3 bits (64), Expect = 9.0
 Identities = 19/77 (24%), Positives = 35/77 (45%)
 Frame = +1

Query: 355 KIPLILGIWGGKGQGKSFQCELVFAKMGINPIMMSAGELESGNAGEPAKLIRQRYREAAD 534
           KIP  + + G  G GK+   + +  +  +    +S  +      G  A  +R  + +A  
Sbjct: 183 KIPKGVLMVGPPGTGKTLLAKAIAGEAKVPFFTISGSDFVEMFVGVGASRVRDMFEQA-- 240

Query: 535 MIKKGKMCCLFINDLDA 585
             KK   C +FI+++DA
Sbjct: 241 --KKAAPCIIFIDEIDA 255


  Database: uniprot_sprot.fasta
    Posted date:  May 25, 2006  5:36 PM
  Number of letters in database: 80,573,946
  Number of sequences in database:  219,361
  
Lambda     K      H
   0.318    0.135    0.401 

Gapped
Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 84,573,773
Number of Sequences: 219361
Number of extensions: 1794701
Number of successful extensions: 5752
Number of sequences better than 10.0: 122
Number of HSP's better than 10.0 without gapping: 5580
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5735
length of database: 80,573,946
effective HSP length: 107
effective length of database: 57,102,319
effective search space used: 5196311029
frameshift window, decay const: 50,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
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