Clone Name	baal31b22
Clone Library Name	barley_pub

---

No.	Definition	Score (bits)	E Value
1	gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mR...	1110	0.0
2	gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mR...	1061	0.0
3	gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA	1015	0.0
4	gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha for...	710	0.0
5	gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form...	690	0.0
6	gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5...	646	0.0
7	dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for ...	613	e-172
8	dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clon...	613	e-172
9	dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clon...	613	e-172
10	dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clon...	613	e-172
11	dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase s...	613	e-172
12	dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase l...	613	e-172
13	dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clon...	605	e-170
14	gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carb...	593	e-166
15	gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate c...	513	e-142
16	dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clon...	478	e-131
17	gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA...	470	e-129
18	gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase ...	383	e-103
19	gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase ...	383	e-103
20	gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/ox...	377	e-101
21	gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase ...	375	e-100
22	gb|AY110044.1| Zea mays CL1146_1 mRNA sequence	325	1e-85
23	ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	317	2e-83
24	ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	317	2e-83
25	ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2...	317	2e-83
26	gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890)...	317	2e-83
27	gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, comp...	317	2e-83
28	gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	317	2e-83
29	gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, compl...	317	2e-83
30	gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730...	317	2e-83
31	gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosph...	317	2e-83
32	gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete se...	317	2e-83
33	gb|BT000613.1| Arabidopsis thaliana Rubsico activase (At2g39730...	309	6e-81
34	gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase ...	309	6e-81
35	gb|AY312576.1| Larrea tridentata Rubisco activase beta form prec...	295	9e-77
36	gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/ox...	289	5e-75
37	gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carb...	280	5e-72
38	emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase	266	8e-68
39	gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome...	262	1e-66
40	gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome...	262	1e-66
41	dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic D...	262	1e-66
42	gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome...	262	1e-66
43	gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precur...	252	1e-63
44	gb|AY312575.1| Larrea tridentata Rubisco activase alpha form pre...	246	7e-62
45	gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precurso...	244	3e-61
46	gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosph...	240	4e-60
47	gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds	236	7e-59
48	gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA...	228	2e-56
49	gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, c...	224	3e-55
50	gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1...	212	1e-51
51	emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate car...	202	9e-49
52	emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphospha...	196	6e-47
53	gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence	194	2e-46
54	gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase m...	194	2e-46
55	gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate...	172	8e-40
56	gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map ...	157	5e-35
57	gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphospha...	157	5e-35
58	emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubis...	151	3e-33
59	gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, part...	123	7e-25
60	emb|Y10657.1|CLRCAGENE C.littorale rca gene	113	7e-22
61	gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precur...	109	1e-20
62	gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/...	105	2e-19
63	emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase	105	2e-19
64	gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence	98	4e-17
65	gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 gen...	98	4e-17
66	gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 gen...	90	1e-14
67	gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 gen...	90	1e-14
68	gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 gen...	90	1e-14
69	gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 gen...	90	1e-14
70	gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 gen...	90	1e-14
71	gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 gen...	90	1e-14
72	gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 gen...	90	1e-14
73	gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 gen...	90	1e-14
74	gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 gen...	90	1e-14
75	gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 gen...	90	1e-14
76	gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 gen...	90	1e-14
77	gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 gen...	90	1e-14
78	gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 gen...	90	1e-14
79	gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genom...	90	1e-14
80	gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete s...	80	9e-12
81	gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete se...	78	4e-11
82	gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete se...	78	4e-11
83	gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate car...	52	0.002
84	gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) ...	46	0.13
85	gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. ...	46	0.13
86	gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome	44	0.52
87	emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphat...	44	0.52
88	gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome	40	8.1
89	gb|AE010322.1| Methanopyrus kandleri AV19 section 21 of 157 of t...	40	8.1
90	gb|CP000110.1| Synechococcus sp. CC9605, complete genome	40	8.1
91	ref|XM_520373.1| PREDICTED: Pan troglodytes LOC464867 (LOC464867...	40	8.1
92	gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence	40	8.1
93	gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome	40	8.1
94	ref|NM_017617.2| Homo sapiens Notch homolog 1, translocation-ass...	40	8.1
95	gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC...	40	8.1
96	gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, com...	40	8.1
97	emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chr...	40	8.1
98	gb|AC104422.4| Homo sapiens chromosome 18, clone RP11-260B14, co...	40	8.1
99	gb|AC100806.2| Homo sapiens chromosome 18, clone CTB-2341H11, co...	40	8.1
100	gb|AE009524.1| Brucella melitensis 16M chromosome I, section 81 ...	40	8.1
101	gb|AF308602.1|AF308602 Homo sapiens NOTCH 1 (N1) mRNA, complete cds	40	8.1
102	dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome	40	8.1
103	gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I...	40	8.1
104	ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302 ...	40	8.1
105	emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chr...	40	8.1
106	gb|AF030027.1|AF030027 Equine herpesvirus 4 strain NS80567, comp...	40	8.1
107	emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I,...	40	8.1
108	gb|U51683.1|BAU51683 Brucella abortus phosphatidate cytidyltrans...	40	8.1
109	emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chr...	40	8.1
110	gb|M73980.1|HUMTAN1 Human TAN-1 mRNA (homologue of Drosophila No...	40	8.1
111	emb|AL806521.9| Mouse DNA sequence from clone RP23-385N7 on chro...	40	8.1

---

>gb|M55447.1|BLYRCAA2 Hordeum vulgare rubisco activase (RcaA2) mRNA, complete cds
          Length = 1709

 Score = 1110 bits (560), Expect = 0.0
 Identities = 592/599 (98%), Gaps = 3/599 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaaggaccaacaggttcacagtcat 60
           ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 224 tgacctcggccgtgaactaccatggcaag-agctccaagg-ccaacaggttcacagtcat 281

                                                                       
Query: 61  ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgcgtacga 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||   |||
Sbjct: 282 ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgctaccga 341

                                                                       
Query: 121 tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 342 tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 401

                                                                       
Query: 181 ggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 461

                                                                       
Query: 241 gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 462 gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 521

                                                                       
Query: 301 catggacaagcttgttgtccatctctcc-aaaacttcatgaccctgcccaacatcaagat 359
           |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 522 catggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaagat 581

                                                                       
Query: 360 cccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagct 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 cccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagct 641

                                                                       
Query: 420 tgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgg 479
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 tgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgg 701

                                                                       
Query: 480 gaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgat 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 702 gaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgat 761

                                                                      
Query: 540 caagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtngga 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 762 caagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtagga 820

---

>gb|M55446.1|BLYRCAA1 Hordeum vulgare rubisco activase (RcaA1) mRNA, 3' end
          Length = 1394

 Score = 1061 bits (535), Expect = 0.0
 Identities = 553/558 (99%), Gaps = 1/558 (0%)
 Strand = Plus / Plus

                                                                       
Query: 42  ccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagt 101
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8   ccaacaggttcacagtcatggcagcggagaacatcgacgagaagaggaacaccgacaagt 67

                                                                       
Query: 102 ggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggca 161
           |||||||||||||   ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 68  ggaagggtcttgctaccgatatctccgacgaccagcaggacatcaccagagggaagggca 127

                                                                       
Query: 162 tcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagct 221
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 128 tcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagct 187

                                                                       
Query: 222 cctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggct 281
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 188 cctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggct 247

                                                                       
Query: 282 tctacatcgctcctgctttcatggacaagcttgttgtccatctctcc-aaaacttcatga 340
           ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 248 tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaaacttcatga 307

                                                                       
Query: 341 ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 400
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 367

                                                                       
Query: 401 aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 460
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 368 aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 427

                                                                       
Query: 461 ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 520
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 428 ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 487

                                                                       
Query: 521 gtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttg 580
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 gtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatcttg 547

                             
Query: 581 acgctggtgcgggtngga 598
           |||||||||||||| |||
Sbjct: 548 acgctggtgcgggtagga 565

---

>gb|BC029790.1| Homo sapiens, clone IMAGE:5192697, mRNA
          Length = 1643

 Score = 1015 bits (512), Expect = 0.0
 Identities = 580/599 (96%), Gaps = 3/599 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaaggaccaacaggttcacagtcat 60
           ||||||||||||||||||||||||||||| |||||||||| ||||||||||||| |||||
Sbjct: 144 tgacctcggccgtgaactaccatggcaag-agctccaagg-ccaacaggttcacggtcat 201

                                                                       
Query: 61  ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgcgtacga 120
           ||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 202 ggcagcggaaaacatcgacgagaagaggaacaccgacaagtggaagggtcttgcgtacga 261

                                                                       
Query: 121 tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 262 tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactccctcttcca 321

                                                                       
Query: 181 ggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 240
           ||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 322 ggcgcccactggcgacggcacccacgaggccgtcctcagctcatacgagtacgtcagcca 381

                                                                       
Query: 241 gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 300
           ||| ||   |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 382 gggactcaagaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 441

                                                                       
Query: 301 catggacaagcttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagat 359
           |||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 442 catggacaagcttgttgtccatctctccaagaacttcatgaccctgcccaacatcaagat 501

                                                                       
Query: 360 cccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagct 419
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 502 cccactcatcttgggtatctggggaggcaagggtcaaggaaaatccttccagtgtgagct 561

                                                                       
Query: 420 tgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgg 479
           ||| ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 562 tgtcttcgccaagatgggcatcaacccaatcatgatgagtgccggagagctggagagtgg 621

                                                                       
Query: 480 gaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgat 539
            ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 caacgccggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgat 681

                                                                      
Query: 540 caagaagggtaagatgtgctgcctcttcatcaacgatcttgacgctggtgcgggtngga 598
           ||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||
Sbjct: 682 caagaagggtaagatgtgctgcctcttcatcaacgatcttgacgccggtgcgggtagga 740

---

>gb|AY312573.1| Deschampsia antarctica Rubisco activase alpha form precursor (RCA1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1616

 Score =  710 bits (358), Expect = 0.0
 Identities = 469/505 (92%), Gaps = 1/505 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || 
Sbjct: 257 gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggt 316

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           ||||| ||||| ||||| || ||||||||||||| |||||| ||||||||||||||||||
Sbjct: 317 aagggtatcgtcgactccctgttccaggcgcccatgggcgatggcacccacgaggccgtc 376

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           ||||||||||||||||||||||||||||||||   |||||||||||||||||||||||||
Sbjct: 377 ctcagctcctacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatg 436

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| |||
Sbjct: 437 ggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaac 496

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 497 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggt 556

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || || ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 557 caggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatg 616

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 617 atgagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggcag 676

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 677 cggtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaac 736

                                    
Query: 574 gatcttgacgctggtgcgggtngga 598
           || || ||||| || |||||| |||
Sbjct: 737 gacctcgacgccggcgcgggtcgga 761



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 58/63 (92%), Gaps = 2/63 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaaggaccaacaggttcacagtcat 60
           |||||||||| |||||||||||||||||| |||| ||||| ||||||||||||| |||||
Sbjct: 162 tgacctcggcagtgaactaccatggcaag-agcttcaagg-ccaacaggttcaccgtcat 219

              
Query: 61  ggc 63
           |||
Sbjct: 220 ggc 222

---

>gb|AY312574.1| Deschampsia antarctica Rubisco activase beta form precursor (RCA2)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1646

 Score =  690 bits (348), Expect = 0.0
 Identities = 466/505 (92%), Gaps = 1/505 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||||||||||||| || || ||||||||||||||||||||||||||||||||||| || 
Sbjct: 247 gacaagtggaagggcctcgcctacgatatctccgacgaccagcaggacatcaccaggggt 306

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           ||||| ||||| |||||  | ||||||||||||| |||||| || |||||||||||||||
Sbjct: 307 aagggtatcgtcgactccttgttccaggcgcccatgggcgatggnacccacgaggccgtc 366

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           |||||||| |||||||||||||||||||||||   |||||||||||||||||||||||||
Sbjct: 367 ctcagctcntacgagtacgtcagccagggcctcaagaagtacgacttcgacaacaccatg 426

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           ||||||||||||||||| || ||||||||||||||||| |||||||| |||||||| |||
Sbjct: 427 ggaggcttctacatcgccccggctttcatggacaagctcgttgtccacctctccaagaac 486

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           ||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 487 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggaaagggt 546

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || || ||||| ||||||||||||||||| ||||||||||||||||||||||| ||||||
Sbjct: 547 caggggaaatccttccagtgtgagcttgtcttcgccaagatgggcatcaacccaatcatg 606

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||||||||||||||||||||| || ||||| |||||||||||||||||||||||||||
Sbjct: 607 atgagtgccggagagctggagagcggcaacgccggagagccagccaagctcatcaggcag 666

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           |||||||| ||||| |||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 667 cggtaccgcgaggccgcagacatgatcaagaagggcaagatgtgctgcctcttcatcaac 726

                                    
Query: 574 gatcttgacgctggtgcgggtngga 598
           || || ||||| || |||||| |||
Sbjct: 727 gacctcgacgccggcgcgggtcgga 751



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 58/63 (92%), Gaps = 2/63 (3%)
 Strand = Plus / Plus

                                                                       
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaaggaccaacaggttcacagtcat 60
           |||||||||| |||||||||||||||||| |||| ||||| ||||||||||||| |||||
Sbjct: 152 tgacctcggcagtgaactaccatggcaag-agcttcaagg-ccaacaggttcaccgtcat 209

              
Query: 61  ggc 63
           |||
Sbjct: 210 ggc 212

---

>gb|M55449.1|BLYRCABG Hordeum vulgare subsp. vulgare ribulose 1,5-bisphosphate carboxylase
            activase (RcaB) gene, complete cds; and ribulose
            1,5-bisphosphate carboxylase activase  (RcaA) gene,
            alternatively spliced, complete cds
          Length = 8766

 Score =  646 bits (326), Expect = 0.0
 Identities = 353/358 (98%), Gaps = 3/358 (0%)
 Strand = Plus / Plus

                                                                        
Query: 1    tgacctcggccgtgaactaccatggcaagnagctccaaggaccaacaggttcacagtcat 60
            ||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||
Sbjct: 5565 tgacctcggccgtgaactaccatggcaag-agctccaagg-ccaacaggttcacagtcat 5622

                                                                        
Query: 61   ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgcgtacga 120
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5623 ggcagcggagaacatcgacgagaagaggaacaccgacaagtggaagggtcttgcgtacga 5682

                                                                        
Query: 121  tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 180
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5683 tatctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttcca 5742

                                                                        
Query: 181  ggcgcccacgggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 240
            ||||||||||||  ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5743 ggcgcccacggggcacggcacccacgaggccgtcctcagctcctacgagtacgtcagcca 5802

                                                                        
Query: 241  gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 300
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 5803 gggcctgcggaagtacgacttcgacaacaccatgggaggcttctacatcgctcctgcttt 5862

                                                                      
Query: 301  catggacaagcttgttgtccatctctcc-aaaacttcatgaccctgcccaacatcaag 357
            |||||||||||||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 5863 catggacaagcttgttgtccatctctccaaaaacttcatgaccctgcccaacatcaag 5920



 Score =  470 bits (237), Expect = e-129
 Identities = 432/495 (87%), Gaps = 4/495 (0%)
 Strand = Plus / Plus

                                                                        
Query: 100  gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 159
            |||||||||||| || ||||| ||||| ||||||||||||||||||||  | ||||| ||
Sbjct: 2939 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 2998

                                                                        
Query: 160  catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 219
            |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| ||
Sbjct: 2999 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 3058

                                                                        
Query: 220  ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 279
            ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 3059 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 3118

                                                                        
Query: 280  cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcat 338
              | |||||||| || || ||||||||||||||  | ||||| ||| |||| ||||||||
Sbjct: 3119 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 3178

                                                                        
Query: 339  gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 398
            ||| || |||||||||||| | || |||||| |||||||||||||||||||||| || ||
Sbjct: 3179 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 3238

                                                                        
Query: 399  aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 458
             || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 3239 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 3298

                                                                        
Query: 459  tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 518
             ||||| ||||||||||| || |||   || ||||| |||||||| ||| ||||| ||||
Sbjct: 3299 cgccggtgagctggagagcggcaac---ggcgagccggccaagctgatccggcagaggta 3355

                                                                        
Query: 519  ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 578
            ||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| ||
Sbjct: 3356 ccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacct 3415

                           
Query: 579  tgacgctggtgcggg 593
             ||||| || |||||
Sbjct: 3416 ggacgccggcgcggg 3430



 Score =  301 bits (152), Expect = 1e-78
 Identities = 154/155 (99%)
 Strand = Plus / Plus

                                                                        
Query: 444  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6408 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 6467

                                                                        
Query: 504  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6468 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 6527

                                               
Query: 564  cttcatcaacgatcttgacgctggtgcgggtngga 598
            ||||||||||||||||||||||||||||||| |||
Sbjct: 6528 cttcatcaacgatcttgacgctggtgcgggtagga 6562



 Score =  174 bits (88), Expect = 2e-40
 Identities = 88/88 (100%)
 Strand = Plus / Plus

                                                                        
Query: 356  agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 415
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 6070 agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 6129

                                        
Query: 416  agcttgtgttcgccaagatgggcatcaa 443
            ||||||||||||||||||||||||||||
Sbjct: 6130 agcttgtgttcgccaagatgggcatcaa 6157

---

>dbj|AB110180.1| Oryza sativa (japonica cultivar-group) mRNA for
           ribulose-bisphosphate carboxylase activase large isoform
           precursor protein, complete cds, clone: 13YPR038
          Length = 1558

 Score =  613 bits (309), Expect = e-172
 Identities = 451/497 (90%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 204 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 263

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 264 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 323

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 324 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 383

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 384 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 443

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 444 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 503

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 504 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 563

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 564 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 623

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 624 cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 683

                            
Query: 574 gatcttgacgctggtgc 590
           ||||| ||||| |||||
Sbjct: 684 gatctggacgcgggtgc 700



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                 
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaa 38
           |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 109 tgacatcggcggtgaactaccatggcaag-agctccaa 145

---

>dbj|AK064986.1| Oryza sativa (japonica cultivar-group) cDNA clone:J013001C24, full
           insert sequence
          Length = 1680

 Score =  613 bits (309), Expect = e-172
 Identities = 451/497 (90%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 241 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 300

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 301 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 360

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 361 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 420

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 421 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 480

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 481 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 540

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 541 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 600

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 601 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 660

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 661 cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 720

                            
Query: 574 gatcttgacgctggtgc 590
           ||||| ||||| |||||
Sbjct: 721 gatctggacgcgggtgc 737



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                 
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaa 38
           |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 146 tgacatcggcggtgaactaccatggcaag-agctccaa 182

---

>dbj|AK060847.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-E04, full
           insert sequence
          Length = 1691

 Score =  613 bits (309), Expect = e-172
 Identities = 451/497 (90%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 240 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 299

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 300 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 359

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 360 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 419

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 420 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 479

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 480 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 539

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 540 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 599

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 600 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 659

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 660 cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 719

                            
Query: 574 gatcttgacgctggtgc 590
           ||||| ||||| |||||
Sbjct: 720 gatctggacgcgggtgc 736



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                 
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaa 38
           |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 145 tgacatcggcggtgaactaccatggcaag-agctccaa 181

---

>dbj|AK060841.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-034-D05, full
           insert sequence
          Length = 1470

 Score =  613 bits (309), Expect = e-172
 Identities = 451/497 (90%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 24  gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 83

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 84  aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 143

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 144 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 203

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 204 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 263

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 264 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 323

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 324 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 383

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 384 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 443

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 444 cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 503

                            
Query: 574 gatcttgacgctggtgc 590
           ||||| ||||| |||||
Sbjct: 504 gatctggacgcgggtgc 520

---

>dbj|AB034748.1| Oryza sativa OsrcaA2 mRNA for RuBisCO activase small isoform
           precursor, complete cds
          Length = 1706

 Score =  613 bits (309), Expect = e-172
 Identities = 451/497 (90%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 245 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 304

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 305 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 364

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 365 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 424

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 425 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 484

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 485 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 544

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 545 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 604

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 605 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 664

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 665 cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 724

                            
Query: 574 gatcttgacgctggtgc 590
           ||||| ||||| |||||
Sbjct: 725 gatctggacgcgggtgc 741



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                 
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaa 38
           |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 150 tgacatcggcggtgaactaccatggcaag-agctccaa 186

---

>dbj|AB034698.1| Oryza sativa OsrcaA1 mRNA for RuBisCO activase large isoform
           precursor, complete cds
          Length = 1623

 Score =  613 bits (309), Expect = e-172
 Identities = 451/497 (90%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 239 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 298

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 299 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 358

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 359 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 418

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 419 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 478

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 479 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 538

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 539 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 598

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 599 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 658

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 659 cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 718

                            
Query: 574 gatcttgacgctggtgc 590
           ||||| ||||| |||||
Sbjct: 719 gatctggacgcgggtgc 735



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                 
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaa 38
           |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 144 tgacatcggcggtgaactaccatggcaag-agctccaa 180

---

>dbj|AK119513.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-200-F01, full
           insert sequence
          Length = 1721

 Score =  605 bits (305), Expect = e-170
 Identities = 450/497 (90%), Gaps = 1/497 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 252 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 311

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 312 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 371

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 372 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 431

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           ||||||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||
Sbjct: 432 ggaggcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaac 491

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           ||||||||||| |||||||||||| ||||||||| | |||||||||||||||||||||||
Sbjct: 492 ttcatgaccctccccaacatcaaggtcccactcaccctgggtatctggggaggcaagggt 551

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 552 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 611

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||| ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||
Sbjct: 612 atgagcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcag 671

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 672 cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 731

                            
Query: 574 gatcttgacgctggtgc 590
           ||||| ||||| |||||
Sbjct: 732 gatctggacgcgggtgc 748



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                 
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaa 38
           |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 157 tgacatcggcggtgaactaccatggcaag-agctccaa 193

---

>gb|U74321.1|OSU74321 Oryza sativa ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase (rca) mRNA, complete cds
          Length = 1675

 Score =  593 bits (299), Expect = e-166
 Identities = 449/497 (90%), Gaps = 4/497 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 212 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 271

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 272 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 331

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           |||||||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||
Sbjct: 332 ctcagctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatg 391

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           ||||||||||||||||| ||| |||||||||||||||| || |||||  ||||||| |||
Sbjct: 392 ggaggcttctacatcgccccttctttcatggacaagctcgtcgtccacatctccaagaac 451

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           ||||||||||| |||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 452 ttcatgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggt 511

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || |||||||| |||||||||||||| || |||||||||||||| |||||||||||||||
Sbjct: 512 cagggaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatg 571

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||| ||||||||||||||||| || |||   |||||||| |||||||| |||||||||
Sbjct: 572 atgagcgccggagagctggagagcggcaac---ggagagccggccaagctgatcaggcag 628

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           |||||||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||
Sbjct: 629 cggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaac 688

                            
Query: 574 gatcttgacgctggtgc 590
           ||||| ||||| |||||
Sbjct: 689 gatctggacgcgggtgc 705



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                 
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaa 38
           |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 117 tgacatcggcggtgaactaccatggcaag-agctccaa 153

---

>gb|AF251264.1|AF251264 Triticum aestivum ribulose bisphosphate carboxylase activase B
           (RcaB) mRNA, complete cds; nuclear gene for chloroplast
           product
          Length = 1525

 Score =  513 bits (259), Expect = e-142
 Identities = 437/495 (88%), Gaps = 1/495 (0%)
 Strand = Plus / Plus

                                                                       
Query: 100 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 159
           |||||||||||| || ||||| |||||||| ||||||||||||||||| || ||||| ||
Sbjct: 217 gtggaagggtctcgcttacgacatctccgatgaccagcaggacatcacgagggggaaagg 276

                                                                       
Query: 160 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 219
           |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| ||
Sbjct: 277 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctgag 336

                                                                       
Query: 220 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 279
           ||||||||||||| |||||||||||||||| |||||||||||||||||||||||||  ||
Sbjct: 337 ctcctacgagtacatcagccagggcctgcgcaagtacgacttcgacaacaccatggacgg 396

                                                                       
Query: 280 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcat 338
             | |||||||| || || ||||||||||||||  | ||||| ||| |||| ||||||||
Sbjct: 397 gctgtacatcgccccggcgttcatggacaagctcatcgtccacctcgccaagaacttcat 456

                                                                       
Query: 339 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 398
           ||| || |||||||||||| |||| |||||| |||||||||||||||||||||| || ||
Sbjct: 457 gacactccccaacatcaaggtccctctcatcctgggtatctggggaggcaagggacaggg 516

                                                                       
Query: 399 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 458
            || || |||||||| ||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 517 caagtcgttccagtgcgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 576

                                                                       
Query: 459 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 518
            ||||||||||||||||| || ||||| || ||||| |||||||| ||| ||||| ||||
Sbjct: 577 cgccggagagctggagagcggcaacgccggcgagccggccaagctgatccggcagaggta 636

                                                                       
Query: 519 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 578
           ||| |||||||| ||||| ||||||||||| |||||||||||||||||||||||||| ||
Sbjct: 637 ccgcgaggctgccgacattatcaagaagggcaagatgtgctgcctcttcatcaacgacct 696

                          
Query: 579 tgacgctggtgcggg 593
            ||||| || |||||
Sbjct: 697 ggacgccggcgcggg 711

---

>dbj|AK104332.1| Oryza sativa (japonica cultivar-group) cDNA clone:001-032-F04, full
           insert sequence
          Length = 1682

 Score =  478 bits (241), Expect = e-131
 Identities = 341/373 (91%), Gaps = 1/373 (0%)
 Strand = Plus / Plus

                                                                       
Query: 219 gctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggag 278
           |||||||||||||| |||||||||| ||  | | ||||||||||||||||||||||||||
Sbjct: 327 gctcctacgagtacctcagccagggtctcagaacgtacgacttcgacaacaccatgggag 386

                                                                       
Query: 279 gcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttca 337
           ||||||||||||| |||||||||||||||||||| || |||||  ||||||| |||||||
Sbjct: 387 gcttctacatcgcccctgctttcatggacaagctcgtcgtccacatctccaagaacttca 446

                                                                       
Query: 338 tgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaag 397
           ||||||| |||||||||||| ||||||||||| ||||||||||||||||||||||||| |
Sbjct: 447 tgaccctccccaacatcaaggtcccactcatcctgggtatctggggaggcaagggtcagg 506

                                                                       
Query: 398 gaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatga 457
           ||||||| |||||||||||||| || |||||||||||||| |||||||||||||||||||
Sbjct: 507 gaaaatccttccagtgtgagctcgtcttcgccaagatggggatcaaccccatcatgatga 566

                                                                       
Query: 458 gtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggt 517
           | ||||||||||||||||| || ||||| |||||||| || ||||| |||||||||||||
Sbjct: 567 gcgccggagagctggagagcggcaacgccggagagccggcgaagctgatcaggcagcggt 626

                                                                       
Query: 518 accgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatc 577
           |||||||||| |||||||| ||||||||||| ||||||||||||||||||||||||||||
Sbjct: 627 accgtgaggcggcagacatcatcaagaaggggaagatgtgctgcctcttcatcaacgatc 686

                        
Query: 578 ttgacgctggtgc 590
           | ||||| |||||
Sbjct: 687 tggacgcgggtgc 699



 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 78/89 (87%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 240 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 299

                                        
Query: 155 aagggcatcgtggactcgctcttccaggc 183
           |||||  |||| ||||| || ||||||||
Sbjct: 300 aagggtttcgtcgactcccttttccaggc 328



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Plus

                                                 
Query: 1   tgacctcggccgtgaactaccatggcaagnagctccaa 38
           |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 145 tgacatcggcggtgaactaccatggcaag-agctccaa 181

---

>gb|M55448.1|BLYRCAB Hordeum vulgare rubisco activase (RcaB) mRNA, complete cds
          Length = 1656

 Score =  470 bits (237), Expect = e-129
 Identities = 432/495 (87%), Gaps = 4/495 (0%)
 Strand = Plus / Plus

                                                                       
Query: 100 gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 159
           |||||||||||| || ||||| ||||| ||||||||||||||||||||  | ||||| ||
Sbjct: 370 gtggaagggtctggcctacgacatctcggacgaccagcaggacatcactcgggggaaagg 429

                                                                       
Query: 160 catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcag 219
           |||||||||||| || |||||||| |||| |||||||||||||||||||||| |||| ||
Sbjct: 430 catcgtggactccctgttccaggcccccatgggcgacggcacccacgaggccatcctaag 489

                                                                       
Query: 220 ctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggagg 279
           ||||||||||||| ||||||||||||||||||||||||||||||||||||||||||  ||
Sbjct: 490 ctcctacgagtacatcagccagggcctgcggaagtacgacttcgacaacaccatggacgg 549

                                                                       
Query: 280 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcat 338
             | |||||||| || || ||||||||||||||  | ||||| ||| |||| ||||||||
Sbjct: 550 gctgtacatcgcgccggcattcatggacaagctcatcgtccacctcgccaagaacttcat 609

                                                                       
Query: 339 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 398
           ||| || |||||||||||| | || |||||| |||||||||||||||||||||| || ||
Sbjct: 610 gacactccccaacatcaaggttcctctcatcctgggtatctggggaggcaagggacaggg 669

                                                                       
Query: 399 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 458
            || || |||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 670 caagtcgttccagtgtgagctggtgttcgccaagatgggcatcaaccccatcatgatgag 729

                                                                       
Query: 459 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 518
            ||||| ||||||||||| || |||   || ||||| |||||||| ||| ||||| ||||
Sbjct: 730 cgccggtgagctggagagcggcaac---ggcgagccggccaagctgatccggcagaggta 786

                                                                       
Query: 519 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 578
           ||| ||||| || ||||| ||||| ||||| |||||||||||||||||||||||||| ||
Sbjct: 787 ccgcgaggcggccgacattatcaacaagggcaagatgtgctgcctcttcatcaacgacct 846

                          
Query: 579 tgacgctggtgcggg 593
            ||||| || |||||
Sbjct: 847 ggacgccggcgcggg 861

---

>gb|AF338240.1|AF338240 Zantedeschia aethiopica rubisco activase (rca4) mRNA, partial cds
          Length = 1674

 Score =  383 bits (193), Expect = e-103
 Identities = 386/449 (85%), Gaps = 1/449 (0%)
 Strand = Plus / Plus

                                                                       
Query: 131 gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 190
           |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| |
Sbjct: 235 gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 294

                                                                       
Query: 191 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 250
           |||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || || 
Sbjct: 295 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 354

                                                                       
Query: 251 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 310
             || | |||| ||||||||| ||   || || ||||||||||| || ||||||||||||
Sbjct: 355 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 414

                                                                       
Query: 311 cttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatc 369
           ||||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| 
Sbjct: 415 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 474

                                                                       
Query: 370 ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 429
           |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 475 ttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgcc 534

                                                                       
Query: 430 aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 489
           |||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| |||
Sbjct: 535 aagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgga 594

                                                                       
Query: 490 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 549
           ||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| 
Sbjct: 595 gagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaagggg 654

                                        
Query: 550 aagatgtgctgcctcttcatcaacgatct 578
           |||||||||||||||||||||||||||||
Sbjct: 655 aagatgtgctgcctcttcatcaacgatct 683

---

>gb|AF338239.1|AF338239 Zantedeschia aethiopica rubisco activase (rca3) mRNA, partial cds
          Length = 1494

 Score =  383 bits (193), Expect = e-103
 Identities = 386/449 (85%), Gaps = 1/449 (0%)
 Strand = Plus / Plus

                                                                       
Query: 131 gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 190
           |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| |
Sbjct: 98  gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 157

                                                                       
Query: 191 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 250
           |||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || || 
Sbjct: 158 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 217

                                                                       
Query: 251 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 310
             || | |||| ||||||||| ||   || || ||||||||||| || ||||||||||||
Sbjct: 218 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 277

                                                                       
Query: 311 cttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatc 369
           ||||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| 
Sbjct: 278 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 337

                                                                       
Query: 370 ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 429
           |||||||||||||||||||| |||||||| ||||| ||||| ||||| ||||||||||||
Sbjct: 338 ttgggtatctggggaggcaaaggtcaagggaaatccttccaatgtgaacttgtgttcgcc 397

                                                                       
Query: 430 aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 489
           |||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| |||
Sbjct: 398 aagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgga 457

                                                                       
Query: 490 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 549
           ||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| 
Sbjct: 458 gagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaagggg 517

                                        
Query: 550 aagatgtgctgcctcttcatcaacgatct 578
           |||||||||||||||||||||||||||||
Sbjct: 518 aagatgtgctgcctcttcatcaacgatct 546

---

>gb|AF084478.3| Zea mays ribulose-1,5-bisphosphate carboxylase/oxygenase activase
           precursor (rca1) mRNA, complete cds
          Length = 1424

 Score =  377 bits (190), Expect = e-101
 Identities = 410/482 (85%), Gaps = 1/482 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || 
Sbjct: 213 gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccaggggc 272

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           |||||| |||| |||   |||||||||||||| | ||| |||||||||||||  ||||| 
Sbjct: 273 aagggcctcgtcgacaacctcttccaggcgcctatgggggacggcacccacgtcgccgtg 332

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           |||||||||||||| ||| ||||||||||||    |   ||| ||||||||||||  |||
Sbjct: 333 ctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgatg 392

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           |  ||||||||||| ||    |  |||||||||||||| || ||||| |||||||| |||
Sbjct: 393 gatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaac 452

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           |||||||||||||| ||||||||| | || |||||| ||||||||||||||||||| || 
Sbjct: 453 ttcatgaccctgccaaacatcaaggttcccctcatcctgggtatctggggaggcaaaggc 512

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || |||||||| ||||| || ||||| || ||||||||||||||||||| ||||||||||
Sbjct: 513 cagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcacccccatcatg 572

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||| ||||| ||||||||||| || ||||| |||||||| ||||||||||||||||||
Sbjct: 573 atgagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggcag 632

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           || |||||||||||  | ||| | ||||||||||| ||||||| ||||||||||||||||
Sbjct: 633 cgctaccgtgaggcctccgacctcatcaagaagggcaagatgtcctgcctcttcatcaac 692

             
Query: 574 ga 575
           ||
Sbjct: 693 ga 694

---

>gb|AF338237.1|AF338237 Zantedeschia aethiopica rubisco activase (rca1) mRNA, partial cds
          Length = 1597

 Score =  375 bits (189), Expect = e-100
 Identities = 385/449 (85%), Gaps = 1/449 (0%)
 Strand = Plus / Plus

                                                                       
Query: 131 gaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggcgcccacg 190
           |||||||||||||||||||| ||||||||||| || ||||| || |||||||| |||| |
Sbjct: 128 gaccagcaggacatcaccagggggaagggcatggtcgactccctgttccaggctcccatg 187

                                                                       
Query: 191 ggcgacggcacccacgaggccgtcctcagctcctacgagtacgtcagccagggcctgcgg 250
           |||||||| |||||| |  ||||||| ||||||||||||||| |||||   || || || 
Sbjct: 188 ggcgacggaacccacaaccccgtcctgagctcctacgagtacatcagcaccggtctccgc 247

                                                                       
Query: 251 aagtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaag 310
             || | |||| ||||||||| ||   || || ||||||||||| || ||||||||||||
Sbjct: 248 tcgttcaacttggacaacaccgtgaatggtttatacatcgctccggccttcatggacaag 307

                                                                       
Query: 311 cttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatc 369
           ||||| || ||  || |||| |||||||||| | |||||||||||||||| || ||||| 
Sbjct: 308 cttgtcgttcacatcaccaagaacttcatgaacttgcccaacatcaagattcctctcatt 367

                                                                       
Query: 370 ttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcc 429
           |||||||||||||||||||| ||||| || ||||| ||||| ||||| ||||||||||||
Sbjct: 368 ttgggtatctggggaggcaaaggtcaggggaaatccttccaatgtgaacttgtgttcgcc 427

                                                                       
Query: 430 aagatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctgga 489
           |||||||| |||||||||||||||||||| ||||| ||||||||||| || ||||| |||
Sbjct: 428 aagatgggaatcaaccccatcatgatgagcgccggtgagctggagagcggcaacgccgga 487

                                                                       
Query: 490 gagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggt 549
           ||||| || ||||| ||| ||||||||||||||||||| || ||||| |||| |||||| 
Sbjct: 488 gagccggcgaagctgatccggcagcggtaccgtgaggccgccgacatcatcaggaagggg 547

                                        
Query: 550 aagatgtgctgcctcttcatcaacgatct 578
           |||||||||||||||||||||||||||||
Sbjct: 548 aagatgtgctgcctcttcatcaacgatct 576

---

>gb|AY110044.1| Zea mays CL1146_1 mRNA sequence
          Length = 1750

 Score =  325 bits (164), Expect = 1e-85
 Identities = 401/482 (83%), Gaps = 1/482 (0%)
 Strand = Plus / Plus

                                                                       
Query: 95  gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
           |||| ||||||||| || || ||||| ||||| ||||||||||||||||||||||| || 
Sbjct: 213 gacaggtggaagggcctggcctacgacatctcggacgaccagcaggacatcaccaggggc 272

                                                                       
Query: 155 aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
           |||||| |||| |||   |||||||||||||| |      ||||||||||||  ||||| 
Sbjct: 273 aagggcctcgtcgacaacctcttccaggcgcctatnnnnnacggcacccacgtcgccgtg 332

                                                                       
Query: 215 ctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatg 274
           |||||||||||||| ||| ||||||||||||    |   ||| ||||||||||||  |||
Sbjct: 333 ctcagctcctacgactacatcagccagggccaaaagtcttacaacttcgacaacatgatg 392

                                                                       
Query: 275 ggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aac 333
           |  ||||||||||| ||    |  |||||||||||||| || ||||| |||||||| |||
Sbjct: 393 gatggcttctacatagccaagggcttcatggacaagctcgtcgtccacctctccaagaac 452

                                                                       
Query: 334 ttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggt 393
           |||||||||||||| ||||||||| | || |||||| ||||||||  ||||||||| || 
Sbjct: 453 ttcatgaccctgccaaacatcaaggttcccctcatcctgggtatcgtgggaggcaaaggc 512

                                                                       
Query: 394 caaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatg 453
           || |||||||| ||||| || ||||| || |||||||||||||||||||     ||||||
Sbjct: 513 cagggaaaatcgttccaatgcgagctggtcttcgccaagatgggcatcannnnnatcatg 572

                                                                       
Query: 454 atgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcag 513
           ||||| ||||| ||||||||||| || ||||| |||||||| ||||||||||||||||||
Sbjct: 573 atgagcgccggcgagctggagagcggcaacgccggagagcccgccaagctcatcaggcag 632

                                                                       
Query: 514 cggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaac 573
           || |||||||||||  | ||| | ||||||||||| ||||||||||||||||||||||||
Sbjct: 633 cgctaccgtgaggcctccgacctcatcaagaagggcaagatgtgctgcctcttcatcaac 692

             
Query: 574 ga 575
           ||
Sbjct: 693 ga 694

---

>ref|NM_179989.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
           transcript variant AT2G39730.2 mRNA, complete cds
          Length = 1815

 Score =  317 bits (160), Expect = 2e-83
 Identities = 329/384 (85%), Gaps = 1/384 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 271
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 496 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555

                                                                       
Query: 272 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 330
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 556 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 616 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675

                                                                       
Query: 391 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 450
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 676 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735

                                                                       
Query: 451 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
           ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 736 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 795

                                                                       
Query: 511 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
           ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 796 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 855

                                   
Query: 571 aacgatcttgacgctggtgcgggt 594
           ||||||||||||||||||||||||
Sbjct: 856 aacgatcttgacgctggtgcgggt 879

---

>ref|NM_179990.1| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
           transcript variant AT2G39730.3 mRNA, complete cds
          Length = 1928

 Score =  317 bits (160), Expect = 2e-83
 Identities = 329/384 (85%), Gaps = 1/384 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 271
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 496 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 555

                                                                       
Query: 272 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 330
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 556 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 615

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 616 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 675

                                                                       
Query: 391 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 450
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 676 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 735

                                                                       
Query: 451 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
           ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 736 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 795

                                                                       
Query: 511 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
           ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 796 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 855

                                   
Query: 571 aacgatcttgacgctggtgcgggt 594
           ||||||||||||||||||||||||
Sbjct: 856 aacgatcttgacgctggtgcgggt 879

---

>ref|NM_129531.2| Arabidopsis thaliana RCA (RUBISCO ACTIVASE) AT2G39730 (RCA)
           transcript variant AT2G39730.1 mRNA, complete cds
          Length = 1833

 Score =  317 bits (160), Expect = 2e-83
 Identities = 329/384 (85%), Gaps = 1/384 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 271
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 525 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584

                                                                       
Query: 272 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 330
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 585 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 645 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704

                                                                       
Query: 391 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 450
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 705 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764

                                                                       
Query: 451 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
           ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 765 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 824

                                                                       
Query: 511 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
           ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 825 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 884

                                   
Query: 571 aacgatcttgacgctggtgcgggt 594
           ||||||||||||||||||||||||
Sbjct: 885 aacgatcttgacgctggtgcgggt 908

---

>gb|BT000710.1| Arabidopsis thaliana clone RAFL09-90-K08 (R19890) unknown protein
           (At2g39730) mRNA, complete cds
          Length = 1697

 Score =  317 bits (160), Expect = 2e-83
 Identities = 329/384 (85%), Gaps = 1/384 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 271
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 407 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466

                                                                       
Query: 272 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 330
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 467 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 527 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586

                                                                       
Query: 391 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 450
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 587 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646

                                                                       
Query: 451 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
           ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 647 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 706

                                                                       
Query: 511 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
           ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 707 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 766

                                   
Query: 571 aacgatcttgacgctggtgcgggt 594
           ||||||||||||||||||||||||
Sbjct: 767 aacgatcttgacgctggtgcgggt 790

---

>gb|AY056108.1| Arabidopsis thaliana At2g39730/T5I7.3_ mRNA, complete cds
          Length = 1674

 Score =  317 bits (160), Expect = 2e-83
 Identities = 329/384 (85%), Gaps = 1/384 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 271
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 410 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469

                                                                       
Query: 272 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 330
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 470 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 530 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589

                                                                       
Query: 391 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 450
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 590 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649

                                                                       
Query: 451 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
           ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 650 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 709

                                                                       
Query: 511 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
           ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 710 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 769

                                   
Query: 571 aacgatcttgacgctggtgcgggt 594
           ||||||||||||||||||||||||
Sbjct: 770 aacgatcttgacgctggtgcgggt 793

---

>gb|AY052703.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1693

 Score =  317 bits (160), Expect = 2e-83
 Identities = 329/384 (85%), Gaps = 1/384 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 271
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 399 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 458

                                                                       
Query: 272 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 330
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 459 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 518

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 519 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 578

                                                                       
Query: 391 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 450
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 579 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 638

                                                                       
Query: 451 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
           ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 639 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 698

                                                                       
Query: 511 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
           ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 699 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 758

                                   
Query: 571 aacgatcttgacgctggtgcgggt 594
           ||||||||||||||||||||||||
Sbjct: 759 aacgatcttgacgctggtgcgggt 782

---

>gb|AY052290.1| Arabidopsis thaliana At2g39730/T5I7.3 mRNA, complete cds
          Length = 1655

 Score =  317 bits (160), Expect = 2e-83
 Identities = 329/384 (85%), Gaps = 1/384 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 271
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 407 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 466

                                                                       
Query: 272 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 330
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 467 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 526

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 527 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 586

                                                                       
Query: 391 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 450
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 587 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 646

                                                                       
Query: 451 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
           ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 647 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 706

                                                                       
Query: 511 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
           ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 707 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 766

                                   
Query: 571 aacgatcttgacgctggtgcgggt 594
           ||||||||||||||||||||||||
Sbjct: 767 aacgatcttgacgctggtgcgggt 790

---

>gb|AF325049.2|AF325049 Arabidopsis thaliana At2g39730 (At2g39730/T5I7.3) mRNA, complete
           cds
          Length = 1674

 Score =  317 bits (160), Expect = 2e-83
 Identities = 329/384 (85%), Gaps = 1/384 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 271
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 410 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 469

                                                                       
Query: 272 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 330
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 470 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 529

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 530 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 589

                                                                       
Query: 391 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 450
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 590 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 649

                                                                       
Query: 451 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
           ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 650 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 709

                                                                       
Query: 511 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
           ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 710 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 769

                                   
Query: 571 aacgatcttgacgctggtgcgggt 594
           ||||||||||||||||||||||||
Sbjct: 770 aacgatcttgacgctggtgcgggt 793

---

>gb|AF329934.1|AF329934 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 1 mRNA, complete cds
          Length = 1559

 Score =  317 bits (160), Expect = 2e-83
 Identities = 407/488 (83%), Gaps = 1/488 (0%)
 Strand = Plus / Plus

                                                                       
Query: 101 tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaagggc 160
           |||||||||||||| || ||||||||||| ||||| || ||||| ||||||||||| || 
Sbjct: 280 tggaagggtcttgcttatgatatctccgatgaccaacaagacattaccagagggaaaggt 339

                                                                       
Query: 161 atcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtcctcagc 220
           || || |||||  | ||||| || |||| |  ||| || || ||| | || ||| | |||
Sbjct: 340 atggtcgactcattgttccaagctcccatgaacgatggtactcactatgctgtcatgagc 399

                                                                       
Query: 221 tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 280
           ||||| |||||| | ||||| ||||| || |  |||||||| ||||||| |||||  || 
Sbjct: 400 tcctatgagtacattagccaaggccttcgcacatacgacttggacaacaacatggatgga 459

                                                                       
Query: 281 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatg 339
           |||||||| || || ||||||||||||||||||||||| ||  || |||| |||| ||||
Sbjct: 460 ttctacattgccccagctttcatggacaagcttgttgttcacatcaccaagaactacatg 519

                                                                       
Query: 340 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 399
           ||||| || ||||| ||| | || || ||||||||||| ||||||||||| |||||||||
Sbjct: 520 acccttcctaacattaaggttcctcttatcttgggtatttggggaggcaaaggtcaagga 579

                                                                       
Query: 400 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 459
           ||||| ||||| ||||||||||| || ||||||||||| ||||||||||| |||||||||
Sbjct: 580 aaatctttccaatgtgagcttgtctttgccaagatgggaatcaaccccattatgatgagt 639

                                                                       
Query: 460 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 519
           ||||||||  |||| ||||||||||| ||||| ||||||||| | ||||||||  |||||
Sbjct: 640 gccggagaattggaaagtgggaacgccggagaaccagccaagttgatcaggcaaaggtac 699

                                                                       
Query: 520 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 579
           |||||||| || ||||| |||||||| || || ||||| |||||||| ||||||||||| 
Sbjct: 700 cgtgaggccgccgacattatcaagaaagggaaaatgtgttgcctctttatcaacgatctc 759

                   
Query: 580 gacgctgg 587
           ||||||||
Sbjct: 760 gacgctgg 767

---

>gb|AY088487.1| Arabidopsis thaliana clone 7114 mRNA, complete sequence
          Length = 1787

 Score =  317 bits (160), Expect = 2e-83
 Identities = 329/384 (85%), Gaps = 1/384 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 271
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 525 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 584

                                                                       
Query: 272 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 330
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 585 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 644

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 645 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 704

                                                                       
Query: 391 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 450
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 705 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 764

                                                                       
Query: 451 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
           ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 765 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 824

                                                                       
Query: 511 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
           ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||||
Sbjct: 825 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttcatc 884

                                   
Query: 571 aacgatcttgacgctggtgcgggt 594
           ||||||||||||||||||||||||
Sbjct: 885 aacgatcttgacgctggtgcgggt 908

---

>gb|BT000613.1| Arabidopsis thaliana Rubsico activase  (At2g39730/T5I7.3) mRNA,
           complete cds
          Length = 1425

 Score =  309 bits (156), Expect = 6e-81
 Identities = 328/384 (85%), Gaps = 1/384 (0%)
 Strand = Plus / Plus

                                                                       
Query: 212 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 271
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 322 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 381

                                                                       
Query: 272 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 330
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 382 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 441

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||| |||| ||||| ||||||||| | ||||| || |||||||| ||||||||||| 
Sbjct: 442 aacttcttgactctgcctaacatcaaggttccacttattttgggtatatggggaggcaaa 501

                                                                       
Query: 391 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 450
           |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| |||
Sbjct: 502 ggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaatc 561

                                                                       
Query: 451 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
           ||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| ||| | 
Sbjct: 562 atgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatccgt 621

                                                                       
Query: 511 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
           ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||| |||||
Sbjct: 622 cagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcctcatc 681

                                   
Query: 571 aacgatcttgacgctggtgcgggt 594
           ||||||||||||||||||||||||
Sbjct: 682 aacgatcttgacgctggtgcgggt 705

---

>gb|AF338238.1|AF338238 Zantedeschia aethiopica rubisco activase (rca2) mRNA, partial cds
          Length = 1436

 Score =  309 bits (156), Expect = 6e-81
 Identities = 262/296 (88%), Gaps = 1/296 (0%)
 Strand = Plus / Plus

                                                                       
Query: 284 tacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatgacc 342
           ||||||||||| || ||||||||||||||||| || ||  || |||| |||||||||| |
Sbjct: 87  tacatcgctccggccttcatggacaagcttgtcgttcacatcaccaagaacttcatgaac 146

                                                                       
Query: 343 ctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaa 402
            |||||||||||||||| || ||||| |||||||||||||||||||| ||||| || |||
Sbjct: 147 ttgcccaacatcaagattcctctcattttgggtatctggggaggcaaaggtcaggggaaa 206

                                                                       
Query: 403 tcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgcc 462
           || ||||| ||||| |||||||||||||||||||| |||||||||||||||||||| |||
Sbjct: 207 tccttccaatgtgaacttgtgttcgccaagatgggaatcaaccccatcatgatgagcgcc 266

                                                                       
Query: 463 ggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgt 522
           || ||||||||||| || ||||| |||||||| || ||||| ||| ||||||||||||||
Sbjct: 267 ggtgagctggagagcggcaacgccggagagccggcgaagctgatccggcagcggtaccgt 326

                                                                   
Query: 523 gaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 578
           ||||| || ||||| |||| |||||| |||||||||||||||||||||||||||||
Sbjct: 327 gaggccgccgacatcatcaggaaggggaagatgtgctgcctcttcatcaacgatct 382

---

>gb|AY312576.1| Larrea tridentata Rubisco activase beta form precursor (RCA2) mRNA,
           complete cds; nuclear gene for chloroplast product
          Length = 1694

 Score =  295 bits (149), Expect = 9e-77
 Identities = 291/337 (86%), Gaps = 1/337 (0%)
 Strand = Plus / Plus

                                                                       
Query: 252 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 311
           ||||| |||| ||||||| |||||  || |||||||| || || || |||||||||||||
Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490

                                                                       
Query: 312 ttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatct 370
           |||| |||||  || |||| |||||| |||  || || ||||||||||| || || ||||
Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550

                                                                       
Query: 371 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 430
           ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || ||||
Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610

                                                                       
Query: 431 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 490
           ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || ||||
Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670

                                                                       
Query: 491 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 550
           | || |||||||| ||||||||  |||||||||| ||||| ||||| |||||||||||||
Sbjct: 671 aacctgccaagctgatcaggcaaaggtaccgtgaagctgctgacattatcaagaagggta 730

                                                
Query: 551 agatgtgctgcctcttcatcaacgatcttgacgctgg 587
           | ||||||||||| |||||||||||||| ||||||||
Sbjct: 731 aaatgtgctgcctgttcatcaacgatctcgacgctgg 767

---

>gb|AF305876.2| Zea mays ribulose 1,5-bisphosphate carboxylase/oxygenase activase
           precursor, mRNA, partial cds
          Length = 1336

 Score =  289 bits (146), Expect = 5e-75
 Identities = 246/278 (88%), Gaps = 1/278 (0%)
 Strand = Plus / Plus

                                                                       
Query: 299 ttcatggacaagcttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaag 357
           |||||||||||||| || ||||| |||||||| ||||||||||||||||| |||||||||
Sbjct: 22  ttcatggacaagctcgtcgtccacctctccaagaacttcatgaccctgccaaacatcaag 81

                                                                       
Query: 358 atcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgag 417
            | || |||||| ||||||||||||||||||| || || |||||||| ||||| || |||
Sbjct: 82  gttcccctcatcctgggtatctggggaggcaaaggccagggaaaatcgttccaatgcgag 141

                                                                       
Query: 418 cttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagagctggagagt 477
           || || ||||||||||||||||||| ||||||||||||||| ||||| ||||||||||| 
Sbjct: 142 ctggtcttcgccaagatgggcatcacccccatcatgatgagcgccggcgagctggagagc 201

                                                                       
Query: 478 gggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatg 537
           || ||||| |||||||| |||||||||||||||||||| |||||||||||  | ||| | 
Sbjct: 202 ggcaacgccggagagcccgccaagctcatcaggcagcgctaccgtgaggcctccgacctc 261

                                                 
Query: 538 atcaagaagggtaagatgtgctgcctcttcatcaacga 575
           ||||||||||| ||||||| ||||||||||||||||||
Sbjct: 262 atcaagaagggcaagatgtcctgcctcttcatcaacga 299

---

>gb|DQ233255.1| Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase alpha 2 mRNA, complete cds
          Length = 1433

 Score =  280 bits (141), Expect = 5e-72
 Identities = 283/329 (86%), Gaps = 1/329 (0%)
 Strand = Plus / Plus

                                                                       
Query: 263 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 322
           ||||||| |||||  || |||||||| |||||||| |||||||||||||||||||| || 
Sbjct: 256 gacaacaacatggatggtttctacattgctcctgcattcatggacaagcttgttgttcac 315

                                                                       
Query: 323 ctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 381
            || |||| ||||||||| |||| || ||||| ||| | || || ||||||||||| |||
Sbjct: 316 atcaccaagaacttcatgtccctccctaacattaaggttcctctaatcttgggtatttgg 375

                                                                       
Query: 382 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 441
           |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 376 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 435

                                                                       
Query: 442 aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 501
           |||||||||||||||||||||||||| ||||| ||||| ||||| || || |||||||||
Sbjct: 436 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 495

                                                                       
Query: 502 ctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc 561
            | ||||||||  |||||||||| ||||| ||||| ||||| ||||| || ||||||  |
Sbjct: 496 ttgatcaggcaaaggtaccgtgaagctgccgacataatcaaaaagggcaaaatgtgcgcc 555

                                        
Query: 562 ctcttcatcaacgatcttgacgctggtgc 590
           |||||||| |||||||| || ||||||||
Sbjct: 556 ctcttcattaacgatctcgatgctggtgc 584

---

>emb|X14212.1|ATRCA Arabidopsis thaliana mRNA for rubisco activase
          Length = 1652

 Score =  266 bits (134), Expect = 8e-68
 Identities = 328/386 (84%), Gaps = 5/386 (1%)
 Strand = Plus / Plus

                                                                       
Query: 212 gtcctcagctcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacacc 271
           ||||| ||||| ||||| ||||| ||||| |||||  || ||||| |||| |||||||  
Sbjct: 391 gtccttagctcatacgaatacgttagccaaggccttaggcagtacaacttggacaacatg 450

                                                                       
Query: 272 atgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa- 330
           ||||  || || ||||| ||||||||||||||||||||||||||||| ||  || |||| 
Sbjct: 451 atggatgggttttacattgctcctgctttcatggacaagcttgttgttcacatcaccaag 510

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatct-ggggaggcaa 389
           |||||| |||| ||||| ||||||||| | ||||| || |||||  ||| ||||||||||
Sbjct: 511 aacttcttgactctgcctaacatcaaggttccacttattttgggc-tctcggggaggcaa 569

                                                                       
Query: 390 gggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccat 449
            |||||||| ||||| |||||||||||||||||  | ||||||||||| |||||||| ||
Sbjct: 570 aggtcaaggtaaatccttccagtgtgagcttgtcatggccaagatgggtatcaacccaat 629

                                                                       
Query: 450 catgatgagtgccggagagctggagagtgggaacgctggag-agccagccaagctcatca 508
           |||||||||||| |||||||| |||||||| ||||| |||| || | | |||||| ||| 
Sbjct: 630 catgatgagtgctggagagcttgagagtggaaacgcaggagaagtccg-caagcttatcc 688

                                                                       
Query: 509 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 568
           | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || |||||||
Sbjct: 689 gtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttca 748

                                     
Query: 569 tcaacgatcttgacgctggtgcgggt 594
           ||||||||||||||||||||||||||
Sbjct: 749 tcaacgatcttgacgctggtgcgggt 774

---

>gb|AC137064.4| Oryza sativa (japonica cultivar-group) chromosome 11 clone OSJNBb0003C04
              map S10003, complete sequence
          Length = 119238

 Score =  262 bits (132), Expect = 1e-66
 Identities = 178/192 (92%), Gaps = 1/192 (0%)
 Strand = Plus / Minus

                                                                          
Query: 253    gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 312
              ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 109435 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 109376

                                                                          
Query: 313    tgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatctt 371
               || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 109375 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 109316

                                                                          
Query: 372    gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 431
              |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 109315 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 109256

                          
Query: 432    gatgggcatcaa 443
              |||||| |||||
Sbjct: 109255 gatggggatcaa 109244



 Score =  196 bits (99), Expect = 6e-47
 Identities = 135/147 (91%)
 Strand = Plus / Minus

                                                                          
Query: 444    ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
              ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||
Sbjct: 109158 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 109099

                                                                          
Query: 504    catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
               ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 109098 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 109039

                                         
Query: 564    cttcatcaacgatcttgacgctggtgc 590
              ||||||||||||||| ||||| |||||
Sbjct: 109038 cttcatcaacgatctggacgcgggtgc 109012



 Score =  176 bits (89), Expect = 5e-41
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                          
Query: 95     gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
              |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 109706 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 109647

                                                                          
Query: 155    aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
              |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 109646 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 109587

                                           
Query: 215    ctcagctcctacgagtacgtcagccaggg 243
              |||||||||||||||||| ||||||||||
Sbjct: 109586 ctcagctcctacgagtacctcagccaggg 109558



 Score =  125 bits (63), Expect = 2e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                          
Query: 100    gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 159
              ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 113205 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 113146

                                                                 
Query: 160    catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 210
              | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 113145 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 113095



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                          
Query: 487    ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 546
              |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 112778 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 112719

                                                    
Query: 547    ggtaagatgtgctgcctcttcatcaacgatcttgacgc 584
              || |||||||||   || ||||||||||| || |||||
Sbjct: 112718 gggaagatgtgcgtgctgttcatcaacgacctggacgc 112681



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                    
Query: 406    ttccagtgtgagcttgtgttcgccaagatgggcatcaa 443
              ||||||||||| || || |||||||||||||| |||||
Sbjct: 112906 ttccagtgtgatctcgtcttcgccaagatggggatcaa 112869



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Minus

                                                    
Query: 1      tgacctcggccgtgaactaccatggcaagnagctccaa 38
              |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 109801 tgacatcggcggtgaactaccatggcaag-agctccaa 109765

---

>gb|AC133008.3| Oryza sativa (japonica cultivar-group) chromosome 11 clone
             OSJNBb0026K20 map S10559, complete sequence
          Length = 115996

 Score =  262 bits (132), Expect = 1e-66
 Identities = 178/192 (92%), Gaps = 1/192 (0%)
 Strand = Plus / Minus

                                                                         
Query: 253   gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 312
             ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 31312 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 31253

                                                                         
Query: 313   tgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatctt 371
              || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 31252 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 31193

                                                                         
Query: 372   gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 431
             |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 31192 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 31133

                         
Query: 432   gatgggcatcaa 443
             |||||| |||||
Sbjct: 31132 gatggggatcaa 31121



 Score =  196 bits (99), Expect = 6e-47
 Identities = 135/147 (91%)
 Strand = Plus / Minus

                                                                         
Query: 444   ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
             ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||
Sbjct: 31035 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 30976

                                                                         
Query: 504   catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
              ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 30975 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 30916

                                        
Query: 564   cttcatcaacgatcttgacgctggtgc 590
             ||||||||||||||| ||||| |||||
Sbjct: 30915 cttcatcaacgatctggacgcgggtgc 30889



 Score =  176 bits (89), Expect = 5e-41
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                         
Query: 95    gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
             |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 31583 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 31524

                                                                         
Query: 155   aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
             |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 31523 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 31464

                                          
Query: 215   ctcagctcctacgagtacgtcagccaggg 243
             |||||||||||||||||| ||||||||||
Sbjct: 31463 ctcagctcctacgagtacctcagccaggg 31435



 Score =  125 bits (63), Expect = 2e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                         
Query: 100   gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 159
             ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 35082 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 35023

                                                                
Query: 160   catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 210
             | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 35022 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 34972



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                         
Query: 487   ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 546
             |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 34655 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 34596

                                                   
Query: 547   ggtaagatgtgctgcctcttcatcaacgatcttgacgc 584
             || |||||||||   || ||||||||||| || |||||
Sbjct: 34595 gggaagatgtgcgtgctgttcatcaacgacctggacgc 34558



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                   
Query: 406   ttccagtgtgagcttgtgttcgccaagatgggcatcaa 443
             ||||||||||| || || |||||||||||||| |||||
Sbjct: 34783 ttccagtgtgatctcgtcttcgccaagatggggatcaa 34746



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Minus

                                                   
Query: 1     tgacctcggccgtgaactaccatggcaagnagctccaa 38
             |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 31678 tgacatcggcggtgaactaccatggcaag-agctccaa 31642

---

>dbj|AP008217.1| Oryza sativa (japonica cultivar-group) genomic DNA, chromosome 11, complete
                sequence
          Length = 28386948

 Score =  262 bits (132), Expect = 1e-66
 Identities = 178/192 (92%), Gaps = 1/192 (0%)
 Strand = Plus / Minus

                                                                            
Query: 253      gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 312
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28304574 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28304515

                                                                            
Query: 313      tgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatctt 371
                 || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 28304514 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28304455

                                                                            
Query: 372      gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 431
                |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 28304454 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28304395

                            
Query: 432      gatgggcatcaa 443
                |||||| |||||
Sbjct: 28304394 gatggggatcaa 28304383



 Score =  196 bits (99), Expect = 6e-47
 Identities = 135/147 (91%)
 Strand = Plus / Minus

                                                                            
Query: 444      ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
                ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||
Sbjct: 28304297 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28304238

                                                                            
Query: 504      catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
                 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 28304237 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28304178

                                           
Query: 564      cttcatcaacgatcttgacgctggtgc 590
                ||||||||||||||| ||||| |||||
Sbjct: 28304177 cttcatcaacgatctggacgcgggtgc 28304151



 Score =  176 bits (89), Expect = 5e-41
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                            
Query: 95       gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
                |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 28304845 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 28304786

                                                                            
Query: 155      aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
                |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 28304785 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 28304726

                                             
Query: 215      ctcagctcctacgagtacgtcagccaggg 243
                |||||||||||||||||| ||||||||||
Sbjct: 28304725 ctcagctcctacgagtacctcagccaggg 28304697



 Score =  125 bits (63), Expect = 2e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                            
Query: 100      gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 159
                ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 28308344 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 28308285

                                                                   
Query: 160      catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 210
                | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 28308284 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28308234



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                            
Query: 487      ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 546
                |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 28307917 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28307858

                                                      
Query: 547      ggtaagatgtgctgcctcttcatcaacgatcttgacgc 584
                || |||||||||   || ||||||||||| || |||||
Sbjct: 28307857 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28307820



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 406      ttccagtgtgagcttgtgttcgccaagatgggcatcaa 443
                ||||||||||| || || |||||||||||||| |||||
Sbjct: 28308045 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28308008



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Minus

                                                      
Query: 1        tgacctcggccgtgaactaccatggcaagnagctccaa 38
                |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 28304940 tgacatcggcggtgaactaccatggcaag-agctccaa 28304904

---

>gb|DP000010.1| Oryza sativa (japonica cultivar-group) chromosome 11, complete sequence
          Length = 28369397

 Score =  262 bits (132), Expect = 1e-66
 Identities = 178/192 (92%), Gaps = 1/192 (0%)
 Strand = Plus / Minus

                                                                            
Query: 253      gtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagct 312
                ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 28287023 gtacgacttcgacaacaccatgggaggcttctacatcgcccctgctttcatggacaagct 28286964

                                                                            
Query: 313      tgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatctt 371
                 || |||||  ||||||| |||||||||||||| |||||||||||| ||||||||||| |
Sbjct: 28286963 cgtcgtccacatctccaagaacttcatgaccctccccaacatcaaggtcccactcatcct 28286904

                                                                            
Query: 372      gggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaa 431
                |||||||||||||||||||||||| |||||||| |||||||||||||| || ||||||||
Sbjct: 28286903 gggtatctggggaggcaagggtcagggaaaatccttccagtgtgagctcgtcttcgccaa 28286844

                            
Query: 432      gatgggcatcaa 443
                |||||| |||||
Sbjct: 28286843 gatggggatcaa 28286832



 Score =  196 bits (99), Expect = 6e-47
 Identities = 135/147 (91%)
 Strand = Plus / Minus

                                                                            
Query: 444      ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
                ||||||||||||||| ||||||||||||||||| || ||||| |||||||| || |||||
Sbjct: 28286746 ccccatcatgatgagcgccggagagctggagagcggcaacgccggagagccggcgaagct 28286687

                                                                            
Query: 504      catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
                 ||||||||||||||||||||||| |||||||| ||||||||||| ||||||||||||||
Sbjct: 28286686 gatcaggcagcggtaccgtgaggcggcagacatcatcaagaaggggaagatgtgctgcct 28286627

                                           
Query: 564      cttcatcaacgatcttgacgctggtgc 590
                ||||||||||||||| ||||| |||||
Sbjct: 28286626 cttcatcaacgatctggacgcgggtgc 28286600



 Score =  176 bits (89), Expect = 5e-41
 Identities = 134/149 (89%)
 Strand = Plus / Minus

                                                                            
Query: 95       gacaagtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagaggg 154
                |||| |||||||||||| || ||||| |||||||| |||||||||||||||||||| |||
Sbjct: 28287294 gacaggtggaagggtctcgcctacgacatctccgatgaccagcaggacatcaccaggggg 28287235

                                                                            
Query: 155      aagggcatcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggccgtc 214
                |||||  |||| ||||| || |||||||| |||||||| || ||||||||||||||||||
Sbjct: 28287234 aagggtttcgtcgactcccttttccaggctcccacgggtgatggcacccacgaggccgtc 28287175

                                             
Query: 215      ctcagctcctacgagtacgtcagccaggg 243
                |||||||||||||||||| ||||||||||
Sbjct: 28287174 ctcagctcctacgagtacctcagccaggg 28287146



 Score =  125 bits (63), Expect = 2e-25
 Identities = 99/111 (89%)
 Strand = Plus / Minus

                                                                            
Query: 100      gtggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 159
                ||||||||| || |||||||| ||||||||||||||||||||||||||||| ||||||||
Sbjct: 28290793 gtggaagggactcgcgtacgacatctccgacgaccagcaggacatcaccagggggaaggg 28290734

                                                                   
Query: 160      catcgtggactcgctcttccaggcgcccacgggcgacggcacccacgaggc 210
                | |||| ||||| || |||||||| |||| ||| || ||||||||||||||
Sbjct: 28290733 cctcgtcgactccctgttccaggctcccatgggtgatggcacccacgaggc 28290683



 Score = 75.8 bits (38), Expect = 1e-10
 Identities = 83/98 (84%)
 Strand = Plus / Minus

                                                                            
Query: 487      ggagagccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaag 546
                |||||||| || ||||| ||| ||||||||||||| ||||| || ||||||||||| |||
Sbjct: 28290366 ggagagcccgcgaagctgatccggcagcggtaccgcgaggcggcggacatgatcaacaag 28290307

                                                      
Query: 547      ggtaagatgtgctgcctcttcatcaacgatcttgacgc 584
                || |||||||||   || ||||||||||| || |||||
Sbjct: 28290306 gggaagatgtgcgtgctgttcatcaacgacctggacgc 28290269



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 34/38 (89%)
 Strand = Plus / Minus

                                                      
Query: 406      ttccagtgtgagcttgtgttcgccaagatgggcatcaa 443
                ||||||||||| || || |||||||||||||| |||||
Sbjct: 28290494 ttccagtgtgatctcgtcttcgccaagatggggatcaa 28290457



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 35/38 (92%), Gaps = 1/38 (2%)
 Strand = Plus / Minus

                                                      
Query: 1        tgacctcggccgtgaactaccatggcaagnagctccaa 38
                |||| ||||| |||||||||||||||||| ||||||||
Sbjct: 28287389 tgacatcggcggtgaactaccatggcaag-agctccaa 28287353

---

>gb|AF047352.1|AF047352 Datisca glomerata rubisco activase precursor, mRNA, complete cds
          Length = 1634

 Score =  252 bits (127), Expect = 1e-63
 Identities = 266/311 (85%), Gaps = 1/311 (0%)
 Strand = Plus / Plus

                                                                       
Query: 281 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaa-cttcatg 339
           |||||||| ||||| |||||||||||||||||||| || ||  || |||||| |||||||
Sbjct: 476 ttctacatagctccagctttcatggacaagcttgtcgttcacatcaccaaaaacttcatg 535

                                                                       
Query: 340 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 399
           || || |||||||| ||| | || ||||| ||||||||||||||||| || |||||||| 
Sbjct: 536 actctccccaacataaaggttcctctcattttgggtatctggggaggtaaaggtcaaggt 595

                                                                       
Query: 400 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 459
           ||||| ||||||||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 596 aaatctttccagtgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 655

                                                                       
Query: 460 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 519
           ||||||||  ||||||| || ||||| |||||||| || ||| | |||||||| ||||  
Sbjct: 656 gccggagaattggagagcggcaacgcaggagagcccgcgaagttgatcaggcaacggtgt 715

                                                                       
Query: 520 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 579
           |||||||| || ||||| ||||||||||| |||||||  ||||| || ||||| ||||||
Sbjct: 716 cgtgaggcggccgacatcatcaagaagggaaagatgtcttgcctatttatcaatgatctt 775

                      
Query: 580 gacgctggtgc 590
           || || |||||
Sbjct: 776 gatgcaggtgc 786

---

>gb|AY312575.1| Larrea tridentata Rubisco activase alpha form precursor (RCA1)
           mRNA, complete cds; nuclear gene for chloroplast product
          Length = 1724

 Score =  246 bits (124), Expect = 7e-62
 Identities = 278/328 (84%), Gaps = 1/328 (0%)
 Strand = Plus / Plus

                                                                       
Query: 252 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 311
           ||||| |||| ||||||| |||||  || |||||||| || || || |||||||||||||
Sbjct: 431 agtacaacttggacaacaacatggacggtttctacatagcaccagccttcatggacaagc 490

                                                                       
Query: 312 ttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatct 370
           |||| |||||  || |||| |||||| |||  || || ||||||||||| || || ||||
Sbjct: 491 ttgtcgtccacatcaccaagaacttcttgagtctccctaacatcaagattcctctgatct 550

                                                                       
Query: 371 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 430
           ||||||||||||||||||| |||||||||||||| ||||| ||||| ||||| || ||||
Sbjct: 551 tgggtatctggggaggcaaaggtcaaggaaaatctttccaatgtgaacttgtttttgcca 610

                                                                       
Query: 431 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 490
           ||||||| ||||||||||||||||||||||| ||||||||||| ||||| || || ||||
Sbjct: 611 agatgggaatcaaccccatcatgatgagtgctggagagctggaaagtggaaatgcaggag 670

                                                                       
Query: 491 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 550
           |||| || ||||| ||||||||  |||| ||||| || || || || ||||||||||| |
Sbjct: 671 agcccgcaaagctgatcaggcaaaggtatcgtgaagcagctgatatcatcaagaagggaa 730

                                       
Query: 551 agatgtgctgcctcttcatcaacgatct 578
           | ||||||||||| || |||||||||||
Sbjct: 731 aaatgtgctgcctgtttatcaacgatct 758

---

>gb|U35111.1|NTU35111 Nicotiana tabacum rubisco activase precursor (Rca) mRNA, complete
           cds
          Length = 1674

 Score =  244 bits (123), Expect = 3e-61
 Identities = 301/359 (83%), Gaps = 1/359 (0%)
 Strand = Plus / Plus

                                                                       
Query: 221 tcctacgagtacgtcagccagggcctgcggaagtacgacttcgacaacaccatgggaggc 280
           |||||||| ||||||||||| || || ||  ||||| |||| |||||||   |||  || 
Sbjct: 396 tcctacgaatacgtcagccaaggtcttcgccagtacaacttggacaacaagttggacgga 455

                                                                       
Query: 281 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatg 339
           |||||||||||||||||||||||||||||||||||||| ||  || |||| |||||| ||
Sbjct: 456 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttg 515

                                                                       
Query: 340 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 399
           |   |||||||||||||| | ||||| ||||||||||||||||||||||| |||||||| 
Sbjct: 516 aaattgcccaacatcaaggttccacttatcttgggtatctggggaggcaaaggtcaaggc 575

                                                                       
Query: 400 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 459
           ||||||||||||||||| ||||| |||   |||||||| ||||||||||| |||||||||
Sbjct: 576 aaatcattccagtgtgaacttgtcttcagaaagatgggaatcaaccccattatgatgagt 635

                                                                       
Query: 460 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 519
           || |||||  |||| ||||| || || ||||||||||||||| | || |||||  |||||
Sbjct: 636 gctggagaattggaaagtggaaatgcaggagagccagccaagttgattaggcaaaggtac 695

                                                                      
Query: 520 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 578
            | || || ||||| || ||||  ||||| || ||||| ||||||||||||||||||||
Sbjct: 696 agagaagcagcagaaatcatcagaaagggaaatatgtgttgcctcttcatcaacgatct 754

---

>gb|AF329935.1|AF329935 Gossypium hirsutum ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase 2 mRNA, partial cds
          Length = 1462

 Score =  240 bits (121), Expect = 4e-60
 Identities = 254/297 (85%), Gaps = 1/297 (0%)
 Strand = Plus / Plus

                                                                       
Query: 263 gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgtccat 322
           ||||||| |||||  || ||||||||||||||||| |||||||||||||||||||| || 
Sbjct: 257 gacaacaacatggatggtttctacatcgctcctgcattcatggacaagcttgttgttcac 316

                                                                       
Query: 323 ctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctgg 381
            ||  ||| ||||||||| |||| || ||||| ||| | || || ||| ||||||| |||
Sbjct: 317 atcagcaagaacttcatgtccctccctaacattaaggttcctctaatcctgggtatttgg 376

                                                                       
Query: 382 ggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatc 441
           |||||||| |||||||||||||| ||||| |||||||||||||| ||||||||||| |||
Sbjct: 377 ggaggcaaaggtcaaggaaaatctttccaatgtgagcttgtgtttgccaagatgggtatc 436

                                                                       
Query: 442 aaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaag 501
           |||||||||||||||||||||||||| ||||| ||||| ||||| || || |||||||||
Sbjct: 437 aaccccatcatgatgagtgccggagaactggaaagtggaaacgccggtgaaccagccaag 496

                                                                    
Query: 502 ctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgc 558
            | ||||||||  |||||||||| || || ||||| ||||| ||||| || ||||||
Sbjct: 497 ttgatcaggcaaaggtaccgtgaagccgccgacataatcaaaaagggcaaaatgtgc 553

---

>gb|J03610.1|SPIRBCO Spinach rubisco activase mRNA, complete cds
          Length = 1832

 Score =  236 bits (119), Expect = 7e-59
 Identities = 257/299 (85%), Gaps = 3/299 (1%)
 Strand = Plus / Plus

                                                                       
Query: 282 tctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatga 340
           ||||||| || ||||| || ||||||||||||||||| ||  || |||| |||||| |||
Sbjct: 630 tctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttcttga 689

                                                                       
Query: 341 ccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaa 400
            | |||||||||||||||| ||||||||||||||| | |||||||||||||||||||| |
Sbjct: 690 acttgcccaacatcaagataccactcatcttgggtgtttggggaggcaagggtcaaggta 749

                                                                       
Query: 401 aatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtg 460
           |||| ||||| ||||||||||||||||||||| | || || |||||||||||||||||||
Sbjct: 750 aatccttccaatgtgagcttgtgttcgccaagttaggaataaaccccatcatgatgagtg 809

                                                                       
Query: 461 ccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtacc 520
           |||||||  |||| ||||| || || ||||||||||| ||| | ||||||||  ||||||
Sbjct: 810 ccggagaattggaaagtggaaatgcaggagagccagctaagttgatcaggcaaaggtacc 869

                                                                      
Query: 521 gtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatct 578
           ||||||| |||||| ||||    |||||||||||||| ||| || ||||||||||||||
Sbjct: 870 gtgaggcagcagacttgattgctaagggtaagatgtg-tgctctattcatcaacgatct 927

---

>gb|AF126870.2|AF126870 Vigna radiata rubisco activase (Rca) mRNA, complete cds; nuclear
           gene for chloroplast product
          Length = 1671

 Score =  228 bits (115), Expect = 2e-56
 Identities = 259/303 (85%), Gaps = 3/303 (0%)
 Strand = Plus / Plus

                                                                       
Query: 281 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatg 339
           |||||||| |||||||||||  |||||||||||||||| ||  || |||| |||||||||
Sbjct: 469 ttctacattgctcctgcttttctggacaagcttgttgttcacatcaccaagaacttcatg 528

                                                                       
Query: 340 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 399
           ||| |||||||||||||| | || |||||  | |||||||||||||||||||| ||||||
Sbjct: 529 accttgcccaacatcaaggttcctctcattcttggtatctggggaggcaagggacaagga 588

                                                                       
Query: 400 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 459
           || || ||||| ||||||||||| || ||||||||||| |||||||||||||||||||||
Sbjct: 589 aagtctttccaatgtgagcttgtctttgccaagatgggaatcaaccccatcatgatgagt 648

                                                                       
Query: 460 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 519
           || |||||| |||| ||||| || || ||||||||||| ||  | ||||||||| | |||
Sbjct: 649 gctggagagttggaaagtggaaatgccggagagccagcaaaattgatcaggcagagatac 708

                                                                       
Query: 520 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatct 578
           ||||| ||||||||  |||||   ||||| |||||||| ||| || ||||||||||||||
Sbjct: 709 cgtgaagctgcagatttgatcgccaagggaaagatgtg-tgctctattcatcaacgatct 767

              
Query: 579 tga 581
           |||
Sbjct: 768 tga 770



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 51/59 (86%)
 Strand = Plus / Plus

                                                                      
Query: 101 tggaagggtcttgcgtacgatatctccgacgaccagcaggacatcaccagagggaaggg 159
           ||||||||||| || ||||||||||| || ||||| || |||||||| || ||||||||
Sbjct: 295 tggaagggtctggcctacgatatctctgatgaccaacaagacatcacaagggggaaggg 353

---

>gb|AY117142.1| Chenopodium quinoa rubisco activase (rca) mRNA, complete cds
          Length = 1809

 Score =  224 bits (113), Expect = 3e-55
 Identities = 266/313 (84%), Gaps = 3/313 (0%)
 Strand = Plus / Plus

                                                                       
Query: 280 cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcat 338
           ||||||||| || ||| |||||||||||||| ||||||| ||  || |||| |||| | |
Sbjct: 514 cttctacattgccccttctttcatggacaagattgttgttcacatcaccaagaactactt 573

                                                                       
Query: 339 gaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagg 398
           || | |||| ||||||||| | || || ||||||||||| ||||||||||| ||||||||
Sbjct: 574 gaacttgcctaacatcaaggttcccctgatcttgggtatttggggaggcaaaggtcaagg 633

                                                                       
Query: 399 aaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgag 458
            ||||| ||||| |||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 634 taaatccttccaatgtgagcttgtgttcgccaagatgggaatcaaccccatcatgatgag 693

                                                                       
Query: 459 tgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggta 518
           ||| |||||  |||| ||||| ||||| ||||||||||| ||| | ||||||||  ||||
Sbjct: 694 tgcgggagaattggaaagtggaaacgcaggagagccagcaaagttgatcaggcaaaggta 753

                                                                       
Query: 519 ccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatc 577
           ||||||||| |||||||| ||    ||||| |||||||| ||| || |||||||||||||
Sbjct: 754 ccgtgaggcagcagacataattgccaagggaaagatgtg-tgctctgttcatcaacgatc 812

                        
Query: 578 ttgacgctggtgc 590
           | ||||| |||||
Sbjct: 813 tcgacgcgggtgc 825

---

>gb|AF041068.1|AF041068 Phaseolus vulgaris rubisco activase (Rca1) mRNA, complete cds
          Length = 1627

 Score =  212 bits (107), Expect = 1e-51
 Identities = 258/307 (84%), Gaps = 1/307 (0%)
 Strand = Plus / Plus

                                                                       
Query: 252 agtacgacttcgacaacaccatgggaggcttctacatcgctcctgctttcatggacaagc 311
           ||||| |||| ||||||| || ||  || |||||||| ||||| |||||  |||||||||
Sbjct: 436 agtacaactttgacaacatcaaggatggtttctacattgctccagcttttttggacaagc 495

                                                                       
Query: 312 ttgttgtccatctctccaa-aacttcatgaccctgcccaacatcaagatcccactcatct 370
           ||||||| ||  || |||| |||||||||||| |||||||||||||| | || |||||  
Sbjct: 496 ttgttgttcacatcgccaagaacttcatgaccttgcccaacatcaaggttcctctcattc 555

                                                                       
Query: 371 tgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgcca 430
           | ||| |||||||||||||||| ||||||||||| ||||| ||||||||||| || ||||
Sbjct: 556 ttggtgtctggggaggcaagggacaaggaaaatctttccaatgtgagcttgtctttgcca 615

                                                                       
Query: 431 agatgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggag 490
           ||||||| ||||||||||||||||||||||| |||||| |||| ||||| || || ||||
Sbjct: 616 agatgggaatcaaccccatcatgatgagtgctggagagttggaaagtggaaatgccggag 675

                                                                       
Query: 491 agccagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggta 550
           ||||||| ||  | || |||||| | |||||||| ||  ||||| | ||||||||||| |
Sbjct: 676 agccagcaaaattgattaggcagagataccgtgaagcctcagacttaatcaagaagggaa 735

                  
Query: 551 agatgtg 557
           |||||||
Sbjct: 736 agatgtg 742

---

>emb|Z21794.1|MDRBSCACA M.domestica ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase mRNA
          Length = 1853

 Score =  202 bits (102), Expect = 9e-49
 Identities = 249/294 (84%), Gaps = 3/294 (1%)
 Strand = Plus / Plus

                                                                       
Query: 290 gctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatgaccctgccc 348
           ||||| ||||| ||||||||||||||||| ||  || |||| |||||||||||||| || 
Sbjct: 485 gctcccgcttttatggacaagcttgttgttcacatcaccaagaacttcatgacccttcct 544

                                                                       
Query: 349 aacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattc 408
           ||||| ||| | || |||||||||||||| ||||||||||| ||||| || || || |||
Sbjct: 545 aacatgaaggttcctctcatcttgggtatttggggaggcaaaggtcagggcaagtctttc 604

                                                                       
Query: 409 cagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgccggagag 468
           ||||| |||||||| || ||||||||| | |||| ||| |||||||||||||||||||| 
Sbjct: 605 cagtgcgagcttgtctttgccaagatgagaatcagccctatcatgatgagtgccggagaa 664

                                                                       
Query: 469 ctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccgtgaggct 528
            |||| ||||| ||||| ||||| || || ||||| ||||||||  |||||||||| || 
Sbjct: 665 ttggaaagtggaaacgcaggagaacccgcgaagctgatcaggcaaaggtaccgtgaagca 724

                                                                 
Query: 529 gcagacatgatcaagaagggtaagatgtgctgc-ctcttcatcaacgatcttga 581
           || ||||| |||| ||||||||| ||||| ||| ||||||||||||||||||||
Sbjct: 725 gccgacattatcaggaagggtaaaatgtg-tgcactcttcatcaacgatcttga 777



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 52/60 (86%)
 Strand = Plus / Plus

                                                                       
Query: 124 ctccgacgaccagcaggacatcaccagagggaagggcatcgtggactcgctcttccaggc 183
           |||||||||||| || |||||||| ||||| ||||| |  |||||||| |||||||||||
Sbjct: 319 ctccgacgaccaacaagacatcacaagaggaaagggtaaggtggactccctcttccaggc 378

---

>emb|Z14980.1|NTRCAJQ4 N.tabacum Rca gene for ribulose bisphosphate carboxylase activase
           (pJQ4)
          Length = 1655

 Score =  196 bits (99), Expect = 6e-47
 Identities = 250/299 (83%), Gaps = 1/299 (0%)
 Strand = Plus / Plus

                                                                       
Query: 281 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatg 339
           ||||||||||||||| |||||||||||||||||||||| ||  || |||| |||||| ||
Sbjct: 426 ttctacatcgctccttctttcatggacaagcttgttgttcacatcaccaagaacttcttg 485

                                                                       
Query: 340 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 399
           |   |||||||||||||| | |||||||| |||||| ||||||||||||| |||||||| 
Sbjct: 486 aaattgcccaacatcaaggttccactcattttgggtgtctggggaggcaaaggtcaaggt 545

                                                                       
Query: 400 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 459
           ||||| ||||||||||||||||| |||   |||||||| |||||||| || |||||||||
Sbjct: 546 aaatctttccagtgtgagcttgtcttcagaaagatgggaatcaaccctattatgatgagt 605

                                                                       
Query: 460 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 519
           ||||||||  |||| ||||| || || |||||||| || ||  | || |||||  |||||
Sbjct: 606 gccggagaattggaaagtggaaatgcaggagagcctgcaaaattgattaggcaaaggtac 665

                                                                      
Query: 520 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatct 578
            | ||||| ||||| || |||| ||| || || || || ||||||||||||||||||||
Sbjct: 666 agagaggcagcagaaatcatcaggaaaggaaacatctgttgcctcttcatcaacgatct 724

---

>gb|BT012795.1| Lycopersicon esculentum clone 113794R, mRNA sequence
          Length = 1519

 Score =  194 bits (98), Expect = 2e-46
 Identities = 252/302 (83%), Gaps = 1/302 (0%)
 Strand = Plus / Plus

                                                                       
Query: 281 ttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatg 339
           |||||||||||||||||||||||||||||||||||||| ||  || |||| |||||| | 
Sbjct: 473 ttctacatcgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttctta 532

                                                                       
Query: 340 accctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaagga 399
           ||  |||||||||||||| | ||||| || |||||| | |||||||| || |||||||| 
Sbjct: 533 acgttgcccaacatcaaggttccacttattttgggtgtttggggaggaaaaggtcaaggt 592

                                                                       
Query: 400 aaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagt 459
           ||||||||||| ||||||||||| |||   |||||||| |||||||| || |||||||||
Sbjct: 593 aaatcattccaatgtgagcttgtcttcagaaagatgggaatcaacccaattatgatgagt 652

                                                                       
Query: 460 gccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtac 519
           || |||||  | || ||||| || || ||||||||||| ||  | ||||||||  |||||
Sbjct: 653 gctggagaattagaaagtggaaatgcaggagagccagctaaattgatcaggcaaaggtac 712

                                                                       
Query: 520 cgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgatctt 579
            | ||||| || || || |||| |||||| || ||||| |||||||||||||||||||||
Sbjct: 713 agagaggccgcggaaatcatcaggaagggaaacatgtgttgcctcttcatcaacgatctt 772

             
Query: 580 ga 581
           ||
Sbjct: 773 ga 774

---

>gb|AF037361.1|AF037361 Lycopersicon pennellii rubisco activase mRNA, complete cds
          Length = 1656

 Score =  194 bits (98), Expect = 2e-46
 Identities = 252/302 (83%), Gaps = 1/302 (0%)
 Strand = Plus / Plus

                                                                       
Query: 278 ggcttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttc 336
           ||||||||||| || ||||||||||||||||| |||||||| ||  || |||| ||||||
Sbjct: 434 ggcttctacattgcccctgctttcatggacaaacttgttgttcacatcaccaagaacttc 493

                                                                       
Query: 337 atgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaa 396
            ||||  |||||||||||||| | ||||||||||||||| | ||||||||||| ||||||
Sbjct: 494 ttgacattgcccaacatcaaggttccactcatcttgggtgtatggggaggcaaaggtcaa 553

                                                                       
Query: 397 ggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatg 456
           || ||||||||||| ||||||||||| |||   |||||||| ||||||||||| ||||||
Sbjct: 554 ggtaaatcattccaatgtgagcttgtcttcagaaagatgggaatcaaccccattatgatg 613

                                                                       
Query: 457 agtgccggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcgg 516
           ||||| |||||  |||| ||||| || || ||||||||||| ||  | || |||||  ||
Sbjct: 614 agtgctggagaattggaaagtggaaatgcaggagagccagctaaattgattaggcaaagg 673

                                                                       
Query: 517 taccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatcaacgat 576
           ||| | ||||| || || || |||| ||| || || ||||| || |||||||||||||||
Sbjct: 674 tacagagaggcagctgaaatcatcaggaaaggaaacatgtgttgtctcttcatcaacgat 733

             
Query: 577 ct 578
           ||
Sbjct: 734 ct 735

---

>gb|AF114155.1|AF114155 Artemisia annua ribulose-1,5-bisphosphate carboxylase/oxygenase
           activase pseudogene, partial sequence
          Length = 472

 Score =  172 bits (87), Expect = 8e-40
 Identities = 177/203 (87%), Gaps = 3/203 (1%)
 Strand = Plus / Plus

                                                                       
Query: 388 aagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccc 447
           ||||||||||||||||| ||||| ||||| ||||| || ||||||||||| ||||  || 
Sbjct: 1   aagggtcaaggaaaatctttccaatgtgaacttgtttttgccaagatgggaatcactcct 60

                                                                       
Query: 448 atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 507
           ||||||||||||||||||||  | || ||| |||||||| |||||||||| |||||||||
Sbjct: 61  atcatgatgagtgccggagaattagaaagt-ggaacgct-gagagccagctaagctcatc 118

                                                                       
Query: 508 aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 567
           || |||| |||||||||||| || || || |||||||||||||| ||||||||| | |||
Sbjct: 119 agacagc-gtaccgtgaggcagccgatatcatcaagaagggtaaaatgtgctgcttgttc 177

                                  
Query: 568 atcaacgatcttgacgctggtgc 590
           |||||||||||||| ||||||||
Sbjct: 178 atcaacgatcttgatgctggtgc 200

---

>gb|AC003000.3| Arabidopsis thaliana chromosome 2 clone T5I7 map CIC10A06, complete
             sequence
          Length = 92624

 Score =  157 bits (79), Expect = 5e-35
 Identities = 130/147 (88%)
 Strand = Plus / Minus

                                                                         
Query: 448   atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 507
             |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| |||
Sbjct: 14555 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 14496

                                                                         
Query: 508   aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 567
              | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||
Sbjct: 14495 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 14436

                                        
Query: 568   atcaacgatcttgacgctggtgcgggt 594
             |||||||||||||||||||||||||||
Sbjct: 14435 atcaacgatcttgacgctggtgcgggt 14409



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Minus

                                                                         
Query: 361   ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 420
             ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 14733 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 14674

                                    
Query: 421   gtgttcgccaagatgggcatcaa 443
             ||  | ||||||||||| |||||
Sbjct: 14673 gtcatggccaagatgggtatcaa 14651



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 66/75 (88%), Gaps = 1/75 (1%)
 Strand = Plus / Minus

                                                                         
Query: 284   tacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatgacc 342
             ||||| ||||||||||||||||||||||||||||| ||  || |||| |||||| |||| 
Sbjct: 14910 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 14851

                            
Query: 343   ctgcccaacatcaag 357
             ||||| |||||||||
Sbjct: 14850 ctgcctaacatcaag 14836

---

>gb|M86720.1|ATHRBCOALP Arabidopisis thaliana ribulose bisphosphate carboxylase/oxygenase
            activase (rca) gene, complete cds
          Length = 3974

 Score =  157 bits (79), Expect = 5e-35
 Identities = 130/147 (88%)
 Strand = Plus / Plus

                                                                        
Query: 448  atcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatc 507
            |||||||||||||| |||||||| |||||||| ||||| ||||| || || ||||| |||
Sbjct: 2728 atcatgatgagtgctggagagcttgagagtggaaacgcaggagaacccgcaaagcttatc 2787

                                                                        
Query: 508  aggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttc 567
             | ||| ||||||||||||| || ||| ||||||||||||| |||||||| || ||||||
Sbjct: 2788 cgtcagaggtaccgtgaggcagctgacttgatcaagaagggaaagatgtgttgtctcttc 2847

                                       
Query: 568  atcaacgatcttgacgctggtgcgggt 594
            |||||||||||||||||||||||||||
Sbjct: 2848 atcaacgatcttgacgctggtgcgggt 2874



 Score = 85.7 bits (43), Expect = 2e-13
 Identities = 73/83 (87%)
 Strand = Plus / Plus

                                                                        
Query: 361  ccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagctt 420
            ||||| || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||
Sbjct: 2550 ccacttattttgggtatatggggaggcaaaggtcaaggtaaatccttccagtgtgagctt 2609

                                   
Query: 421  gtgttcgccaagatgggcatcaa 443
            ||  | ||||||||||| |||||
Sbjct: 2610 gtcatggccaagatgggtatcaa 2632



 Score = 69.9 bits (35), Expect = 9e-09
 Identities = 66/75 (88%), Gaps = 1/75 (1%)
 Strand = Plus / Plus

                                                                        
Query: 284  tacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcatgacc 342
            ||||| ||||||||||||||||||||||||||||| ||  || |||| |||||| |||| 
Sbjct: 2373 tacattgctcctgctttcatggacaagcttgttgttcacatcaccaagaacttcttgact 2432

                           
Query: 343  ctgcccaacatcaag 357
            ||||| |||||||||
Sbjct: 2433 ctgcctaacatcaag 2447

---

>emb|AJ271896.1|PHA271896 Pinus halepensis partial mRNA for rubisco activase (rca gene)
          Length = 678

 Score =  151 bits (76), Expect = 3e-33
 Identities = 227/276 (82%), Gaps = 1/276 (0%)
 Strand = Plus / Plus

                                                                       
Query: 283 ctacatcgctcctgctttcatggacaagcttgttgtccatctctccaaaa-cttcatgac 341
           |||||| ||||||||||| ||||||||||||||||| ||  |||| |||| |||||||| 
Sbjct: 156 ctacattgctcctgcttttatggacaagcttgttgttcacatctcgaaaaacttcatgaa 215

                                                                       
Query: 342 cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaagggtcaaggaaa 401
           | |||| ||||||||| | || |||||  | ||||| |||||||||||||||||||||||
Sbjct: 216 cttgcctaacatcaaggttcctctcattcttggtatttggggaggcaagggtcaaggaaa 275

                                                                       
Query: 402 atcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatcatgatgagtgc 461
            || ||||| ||||||||||| || || ||  |||| |||||||| || |||||||||||
Sbjct: 276 gtccttccaatgtgagcttgtatttgcaaaattgggaatcaacccaattatgatgagtgc 335

                                                                       
Query: 462 cggagagctggagagtgggaacgctggagagccagccaagctcatcaggcagcggtaccg 521
           ||| || |||||||||||  | || |||||||| || ||  | |||||  |||| |||||
Sbjct: 336 cggtgaactggagagtggagatgcaggagagcccgcaaaattgatcagaaagcgataccg 395

                                               
Query: 522 tgaggctgcagacatgatcaagaagggtaagatgtg 557
           ||| || || |||||  ||||||| || ||||||||
Sbjct: 396 tgaagcggccgacattgtcaagaaaggaaagatgtg 431

---

>gb|AY130300.1| Medicago sativa rubisco activase (Rca) mRNA, partial cds
          Length = 1063

 Score =  123 bits (62), Expect = 7e-25
 Identities = 158/190 (83%)
 Strand = Plus / Plus

                                                                       
Query: 389 agggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaacccca 448
           |||| ||||||||||| |||||   ||||||||| || ||||||||||| ||||||||||
Sbjct: 7   agggacaaggaaaatctttccaagctgagcttgtctttgccaagatgggaatcaacccca 66

                                                                       
Query: 449 tcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatca 508
           ||||||||||||| |||||||| || ||||| || || ||||||||||| ||  | ||||
Sbjct: 67  tcatgatgagtgctggagagcttgaaagtggaaatgcaggagagccagcaaaattgatca 126

                                                                       
Query: 509 ggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttca 568
           | ||| | |||||||| ||  | ||||| |||| ||| || |||||||| || || ||||
Sbjct: 127 gacagagataccgtgaagcctctgacattatcaggaaaggaaagatgtgttgtctgttca 186

                     
Query: 569 tcaacgatct 578
           ||||||||||
Sbjct: 187 tcaacgatct 196

---

>emb|Y10657.1|CLRCAGENE C.littorale rca gene
          Length = 2513

 Score =  113 bits (57), Expect = 7e-22
 Identities = 132/157 (84%)
 Strand = Plus / Plus

                                                                        
Query: 434  tgggcatcaaccccatcatgatgagtgccggagagctggagagtgggaacgctggagagc 493
            ||||||||| ||||||| | |||  |||||| |||||||||  ||| ||||| || ||||
Sbjct: 1443 tgggcatcagccccatcgtcatgtctgccggtgagctggagtctggtaacgccggtgagc 1502

                                                                        
Query: 494  cagccaagctcatcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaaga 553
            | |||||||||||| | ||||| ||||| |||||| | ||||   | |||||||| ||||
Sbjct: 1503 ccgccaagctcatccgccagcgctaccgcgaggcttccgacagcgtgaagaagggcaaga 1562

                                                 
Query: 554  tgtgctgcctcttcatcaacgatcttgacgctggtgc 590
            |||||| |||||||||||||||||| |||||||||||
Sbjct: 1563 tgtgctccctcttcatcaacgatctggacgctggtgc 1599



 Score = 61.9 bits (31), Expect = 2e-06
 Identities = 61/71 (85%)
 Strand = Plus / Plus

                                                                        
Query: 331  aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
            |||||||||  ||||||||| |||||| | || |||||| ||||||||||||| ||||||
Sbjct: 1182 aacttcatggacctgcccaagatcaaggttcccctcatcctgggtatctggggtggcaag 1241

                       
Query: 391  ggtcaaggaaa 401
            || || |||||
Sbjct: 1242 ggccagggaaa 1252

---

>gb|AF052424.1|AF052424 Datisca glomerata rubisco activase precursor, gene, partial cds
          Length = 1216

 Score =  109 bits (55), Expect = 1e-20
 Identities = 124/147 (84%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||||||||||||||||||||  ||||||| || ||||| |||||||| || ||| |
Sbjct: 467 ccccatcatgatgagtgccggagaattggagagcggcaacgcaggagagcccgcgaagtt 526

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            |||||||| ||||  |||||||| || ||||| ||||||||||| |||||||  |||||
Sbjct: 527 gatcaggcaacggtgtcgtgaggcggccgacatcatcaagaagggaaagatgtcttgcct 586

                                      
Query: 564 cttcatcaacgatcttgacgctggtgc 590
            || ||||| |||||||| || |||||
Sbjct: 587 atttatcaatgatcttgatgcaggtgc 613



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 72/80 (90%)
 Strand = Plus / Plus

                                                                       
Query: 364 ctcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtg 423
           ||||| ||||||||||||||||| || |||||||| ||||| ||||||||||||||||| 
Sbjct: 186 ctcattttgggtatctggggaggtaaaggtcaaggtaaatctttccagtgtgagcttgtc 245

                               
Query: 424 ttcgccaagatgggcatcaa 443
           || ||||||||||| |||||
Sbjct: 246 tttgccaagatgggaatcaa 265



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 33/35 (94%)
 Strand = Plus / Plus

                                              
Query: 281 ttctacatcgctcctgctttcatggacaagcttgt 315
           |||||||| ||||| ||||||||||||||||||||
Sbjct: 6   ttctacatagctccagctttcatggacaagcttgt 40

---

>gb|S45033.1| rubisco activase, ribulosebisphosphate carboxylase/oxygenase activase
            {alternatively spliced} [spinach, Genomic, 3691 nt]
          Length = 3691

 Score =  105 bits (53), Expect = 2e-19
 Identities = 71/77 (92%)
 Strand = Plus / Plus

                                                                        
Query: 356  agatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgtg 415
            |||| ||||||||||||||| | |||||||||||||||||||| ||||| ||||| ||||
Sbjct: 2238 agataccactcatcttgggtgtttggggaggcaagggtcaaggtaaatccttccaatgtg 2297

                             
Query: 416  agcttgtgttcgccaag 432
            |||||||||||||||||
Sbjct: 2298 agcttgtgttcgccaag 2314



 Score = 95.6 bits (48), Expect = 2e-16
 Identities = 116/136 (85%), Gaps = 2/136 (1%)
 Strand = Plus / Plus

                                                                        
Query: 444  ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
            ||||||||||||||||||||||||  |||| ||||| || || ||||||||||| ||| |
Sbjct: 2421 ccccatcatgatgagtgccggagaattggaaagtggaaatgcaggagagccagctaagtt 2480

                                                                        
Query: 504  catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgc-c 562
             ||||||||  ||||||||||||| |||||| ||||    |||||||||||||| ||| |
Sbjct: 2481 gatcaggcaaaggtaccgtgaggcagcagacttgattgctaagggtaagatgtg-tgctc 2539

                            
Query: 563  tcttcatcaacgatct 578
            | ||||||||||||||
Sbjct: 2540 tattcatcaacgatct 2555



 Score = 54.0 bits (27), Expect = 5e-04
 Identities = 67/79 (84%), Gaps = 1/79 (1%)
 Strand = Plus / Plus

                                                                        
Query: 280  cttctacatcgctcctgctttcatggacaagcttgttgtccatctctccaa-aacttcat 338
            ||||||||| || ||||| || ||||||||||||||||| ||  || |||| |||||| |
Sbjct: 2067 cttctacattgcccctgcctttatggacaagcttgttgttcacatcaccaagaacttctt 2126

                               
Query: 339  gaccctgcccaacatcaag 357
            || | ||||||||||||||
Sbjct: 2127 gaacttgcccaacatcaag 2145

---

>emb|X67674.1|CSRUBAC C.sativus mRNA for rubisco activase
          Length = 2031

 Score =  105 bits (53), Expect = 2e-19
 Identities = 206/257 (80%)
 Strand = Plus / Plus

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||| ||||||| || ||||| ||| | || |||||  ||||| | |||||||| || 
Sbjct: 522 aacttcttgaccctcccgaacattaaggttcctctcattctgggtgtttggggaggtaaa 581

                                                                       
Query: 391 ggtcaaggaaaatcattccagtgtgagcttgtgttcgccaagatgggcatcaaccccatc 450
           ||||||||||| || ||||||||||| ||||| || || |||||||| |||||||| || 
Sbjct: 582 ggtcaaggaaagtctttccagtgtgaacttgtatttgctaagatgggaatcaaccctatt 641

                                                                       
Query: 451 atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
           ||||||||||| || ||  | || |||||||| || ||||||||||| ||  | ||||||
Sbjct: 642 atgatgagtgctggggaattagaaagtgggaatgcaggagagccagcaaaattgatcagg 701

                                                                       
Query: 511 cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
           ||  | ||| | ||||| || || || |||||||| || || ||||| || || || |||
Sbjct: 702 caaagatacagagaggcagctgatatcatcaagaaagggaaaatgtgttgtctatttatc 761

                            
Query: 571 aacgatcttgacgctgg 587
           ||||||||||| |||||
Sbjct: 762 aacgatcttgatgctgg 778

---

>gb|DQ430613.1| Sorghum propinquum locus S10003 genomic sequence
          Length = 619

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 118/141 (83%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 109 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 168

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||  |||||| ||||||| ||||||
Sbjct: 169 gatccgtcagcgctaccgtgaggccgcggacctgatctcgaagggcaagatgtcctgcct 228

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 229 gttcatcaacgatctcgacgc 249

---

>gb|DQ430604.1| Sorghum bicolor voucher NSL56174 locus S10003 genomic sequence
          Length = 627

 Score = 97.6 bits (49), Expect = 4e-17
 Identities = 118/141 (83%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 117 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 176

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||  |||||| ||||||| ||||||
Sbjct: 177 gatccgtcagcgctaccgtgaggcggcggacctgatctcgaagggcaagatgtcctgcct 236

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 237 gttcatcaacgatctggacgc 257

---

>gb|DQ430612.1| Sorghum bicolor voucher PI585454 locus S10003 genomic sequence
          Length = 637

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 247 gttcatcaacgatctcgacgc 267

---

>gb|DQ430611.1| Sorghum bicolor voucher PI267539 locus S10003 genomic sequence
          Length = 633

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 243 gttcatcaacgatctcgacgc 263

---

>gb|DQ430610.1| Sorghum bicolor voucher PI267408 locus S10003 genomic sequence
          Length = 635

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 245 gttcatcaacgatctcgacgc 265

---

>gb|DQ430609.1| Sorghum bicolor voucher PI221607 locus S10003 genomic sequence
          Length = 635

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 245 gttcatcaacgatctcgacgc 265

---

>gb|DQ430608.1| Sorghum bicolor voucher PI152702 locus S10003 genomic sequence
          Length = 639

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 249 gttcatcaacgatctcgacgc 269

---

>gb|DQ430607.1| Sorghum bicolor voucher NSL92371 locus S10003 genomic sequence
          Length = 633

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 243 gttcatcaacgatctcgacgc 263

---

>gb|DQ430606.1| Sorghum bicolor voucher NSL77217 locus S10003 genomic sequence
          Length = 635

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 245 gttcatcaacgatctcgacgc 265

---

>gb|DQ430605.1| Sorghum bicolor voucher NSL77034 locus S10003 genomic sequence
          Length = 633

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 123 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 182

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 183 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 242

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 243 gttcatcaacgatctcgacgc 263

---

>gb|DQ430603.1| Sorghum bicolor voucher NSL56003 locus S10003 genomic sequence
          Length = 635

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 245 gttcatcaacgatctcgacgc 265

---

>gb|DQ430602.1| Sorghum bicolor voucher NSL55243 locus S10003 genomic sequence
          Length = 635

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 245 gttcatcaacgatctcgacgc 265

---

>gb|DQ430601.1| Sorghum bicolor voucher NSL51365 locus S10003 genomic sequence
          Length = 635

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 245 gttcatcaacgatctcgacgc 265

---

>gb|DQ430600.1| Sorghum bicolor voucher NSL51030 locus S10003 genomic sequence
          Length = 637

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 127 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 186

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 187 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 246

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 247 gttcatcaacgatctcgacgc 267

---

>gb|DQ430599.1| Sorghum bicolor voucher NSL50875 locus S10003 genomic sequence
          Length = 635

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 125 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 184

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 185 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 244

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 245 gttcatcaacgatctcgacgc 265

---

>gb|DQ430598.1| Sorghum bicolor voucher BTx623 locus S10003 genomic sequence
          Length = 639

 Score = 89.7 bits (45), Expect = 1e-14
 Identities = 117/141 (82%)
 Strand = Plus / Plus

                                                                       
Query: 444 ccccatcatgatgagtgccggagagctggagagtgggaacgctggagagccagccaagct 503
           ||||||| ||||||| ||||| ||||| ||||| || ||||| || ||||| || |||||
Sbjct: 129 ccccatcgtgatgagcgccggcgagctagagagcggcaacgccggtgagccggcgaagct 188

                                                                       
Query: 504 catcaggcagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcct 563
            ||| | ||||| ||||||||||| || ||| |||||   ||||| ||||||| ||||||
Sbjct: 189 gatccgtcagcgctaccgtgaggccgcggacctgatctccaagggcaagatgtcctgcct 248

                                
Query: 564 cttcatcaacgatcttgacgc 584
            |||||||||||||| |||||
Sbjct: 249 gttcatcaacgatctcgacgc 269

---

>gb|AC135233.19| Medicago truncatula clone mth2-14c14, complete sequence
          Length = 108028

 Score = 79.8 bits (40), Expect = 9e-12
 Identities = 76/88 (86%)
 Strand = Plus / Minus

                                                                        
Query: 355  aagatcccactcatcttgggtatctggggaggcaagggtcaaggaaaatcattccagtgt 414
            ||||| || ||||| ||||| || ||||||||||| ||||||||||| ||||| || |||
Sbjct: 7541 aagattcctctcatattgggcatttggggaggcaaaggtcaaggaaagtcatttcaatgt 7482

                                        
Query: 415  gagcttgtgttcgccaagatgggcatca 442
            |||||||| || ||||||||||| ||||
Sbjct: 7481 gagcttgtatttgccaagatgggaatca 7454



 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 108/131 (82%)
 Strand = Plus / Minus

                                                                        
Query: 451  atgatgagtgccggagagctggagagtgggaacgctggagagccagccaagctcatcagg 510
            |||||||||||||||||  |||| ||||| || || |||||||| || ||| | || |||
Sbjct: 7262 atgatgagtgccggagaattggaaagtggaaatgcaggagagcctgcaaagttgattagg 7203

                                                                        
Query: 511  cagcggtaccgtgaggctgcagacatgatcaagaagggtaagatgtgctgcctcttcatc 570
            ||  |||||||||||||  | ||||| ||||  || || ||||||||||| |||||||||
Sbjct: 7202 caaaggtaccgtgaggcgtccgacattatcagaaaaggaaagatgtgctgtctcttcatc 7143

                       
Query: 571  aacgatcttga 581
            || ||||||||
Sbjct: 7142 aatgatcttga 7132

---

>gb|AC130652.27| Medicago truncatula clone mth1-1k12, complete sequence
          Length = 105218

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                          
Query: 373    ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 432
              |||||||||||||| || |||||||||||||| |||||   ||||||||| || ||||||
Sbjct: 104933 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 104874

                         
Query: 433    atgggcatcaa 443
              |||||||||||
Sbjct: 104873 atgggcatcaa 104863



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                                
Query: 448    atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 497
              |||||||||||||| |||||||| || ||||| || || ||||| |||||
Sbjct: 104183 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 104134

---

>gb|AC129090.22| Medicago truncatula clone mth2-14i8, complete sequence
          Length = 163160

 Score = 77.8 bits (39), Expect = 4e-11
 Identities = 63/71 (88%)
 Strand = Plus / Minus

                                                                         
Query: 373   ggtatctggggaggcaagggtcaaggaaaatcattccagtgtgagcttgtgttcgccaag 432
             |||||||||||||| || |||||||||||||| |||||   ||||||||| || ||||||
Sbjct: 83958 ggtatctggggaggtaaaggtcaaggaaaatctttccaagctgagcttgtctttgccaag 83899

                        
Query: 433   atgggcatcaa 443
             |||||||||||
Sbjct: 83898 atgggcatcaa 83888



 Score = 56.0 bits (28), Expect = 1e-04
 Identities = 49/56 (87%)
 Strand = Plus / Minus

                                                                     
Query: 263   gacaacaccatgggaggcttctacatcgctcctgctttcatggacaagcttgttgt 318
             |||||||||||||  || || ||||| || |||||||| |||||||||||||||||
Sbjct: 84295 gacaacaccatggatggtttttacattgcacctgcttttatggacaagcttgttgt 84240



 Score = 44.1 bits (22), Expect = 0.52
 Identities = 43/50 (86%)
 Strand = Plus / Minus

                                                               
Query: 448   atcatgatgagtgccggagagctggagagtgggaacgctggagagccagc 497
             |||||||||||||| |||||||| || ||||| || || ||||| |||||
Sbjct: 83208 atcatgatgagtgctggagagctagaaagtggaaatgcgggagaaccagc 83159

---

>gb|M62962.1|CRERBCOA C.reinhardtii ribulose 1,5-bisphosphate carboxylase/oxygenase
           activase mRNA, complete cds
          Length = 1693

 Score = 52.0 bits (26), Expect = 0.002
 Identities = 53/62 (85%)
 Strand = Plus / Plus

                                                                       
Query: 331 aacttcatgaccctgcccaacatcaagatcccactcatcttgggtatctggggaggcaag 390
           |||||||||  ||||||||| |||||| | || |||||  ||||||||||||| ||||||
Sbjct: 411 aacttcatggacctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaag 470

             
Query: 391 gg 392
           ||
Sbjct: 471 gg 472

---

>gb|AY461703.1| Chlamydomonas reinhardtii rubisco activase (Rca) gene, complete cds
          Length = 4500

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 44/51 (86%)
 Strand = Plus / Plus

                                                               
Query: 342  cctgcccaacatcaagatcccactcatcttgggtatctggggaggcaaggg 392
            ||||||||| |||||| | || |||||  ||||||||||||| ||||||||
Sbjct: 1634 cctgcccaagatcaaggtgcccctcattctgggtatctggggtggcaaggg 1684

---

>gb|AE016958.1| Mycobacterium avium subsp. paratuberculosis str. k10, complete genome
          Length = 4829781

 Score = 46.1 bits (23), Expect = 0.13
 Identities = 23/23 (100%)
 Strand = Plus / Minus

                                      
Query: 126     ccgacgaccagcaggacatcacc 148
               |||||||||||||||||||||||
Sbjct: 1452088 ccgacgaccagcaggacatcacc 1452066

---

>gb|CP000360.1| Acidobacteria bacterium Ellin345, complete genome
          Length = 5650368

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 22/22 (100%)
 Strand = Plus / Minus

                                     
Query: 168     actcgctcttccaggcgcccac 189
               ||||||||||||||||||||||
Sbjct: 2553524 actcgctcttccaggcgcccac 2553503

---

>emb|Z14981.1|NTRCATA1 N.tabacum Rca mRNA for ribulosebisphosphate carboxylase activase
           (pTA1.1)
          Length = 1011

 Score = 44.1 bits (22), Expect = 0.52
 Identities = 25/26 (96%)
 Strand = Plus / Plus

                                     
Query: 553 atgtgctgcctcttcatcaacgatct 578
           ||||| ||||||||||||||||||||
Sbjct: 55  atgtgttgcctcttcatcaacgatct 80

---

>gb|CP000002.2| Bacillus licheniformis ATCC 14580, complete genome
          Length = 4222334

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 58      catggcagcggagaacatcg 77
               ||||||||||||||||||||
Sbjct: 1379894 catggcagcggagaacatcg 1379875

---

>gb|AE010322.1| Methanopyrus kandleri AV19 section 21 of 157 of the complete genome
          Length = 10732

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                    
Query: 122  atctccgacgaccagcaggacatc 145
            |||||| |||||||||||||||||
Sbjct: 8676 atctcccacgaccagcaggacatc 8653

---

>gb|CP000110.1| Synechococcus sp. CC9605, complete genome
          Length = 2510659

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                  
Query: 62     gcagcggagaacatcgacga 81
              ||||||||||||||||||||
Sbjct: 173412 gcagcggagaacatcgacga 173393

---

>ref|XM_520373.1| PREDICTED: Pan troglodytes LOC464867 (LOC464867), mRNA
          Length = 1685

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                    
Query: 185  cccacgggcgacggcacccacgag 208
            ||||||||||||| ||||||||||
Sbjct: 1369 cccacgggcgacgtcacccacgag 1392

---

>gb|AE014291.4| Brucella suis 1330 chromosome I, complete sequence
          Length = 2107794

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 341     ccctgcccaacatcaagatc 360
               ||||||||||||||||||||
Sbjct: 1130357 ccctgcccaacatcaagatc 1130376

---

>gb|AE017333.1| Bacillus licheniformis DSM 13, complete genome
          Length = 4222645

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 58      catggcagcggagaacatcg 77
               ||||||||||||||||||||
Sbjct: 1380755 catggcagcggagaacatcg 1380736

---

>ref|NM_017617.2| Homo sapiens Notch homolog 1, translocation-associated (Drosophila)
           (NOTCH1), mRNA
          Length = 9312

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 185 cccacgggcgacggcacccacgag 208
           ||||||||||||| ||||||||||
Sbjct: 703 cccacgggcgacgtcacccacgag 726

---

>gb|AC009991.5|ATAC009991 Arabidopsis thaliana chromosome III BAC F9F8 genomic sequence, complete
             sequence
          Length = 101284

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 406   ttccagtgtgagcttgtgtt 425
             ||||||||||||||||||||
Sbjct: 97287 ttccagtgtgagcttgtgtt 97268

---

>gb|AC115709.11| Mus musculus chromosome 12, clone RP23-76M3, complete sequence
          Length = 193170

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 278    ggcttctacatcgctcctgctttc 301
              ||||||| ||||||||||||||||
Sbjct: 147044 ggcttctgcatcgctcctgctttc 147067

---

>emb|AL592301.14| Human DNA sequence from clone RP11-413M3 on chromosome 9 Contains the 3'
              end of the gene for activator of G-protein signalling 3
              (AGS3), two novel genes, the CARD9 gene for caspase
              recruitment domain family member 9, the SNAPC4 gene for a
              190kDa small nuclear RNA activating complex polypeptide 4, 
              the SDCCAG3 gene for serologically defined colon cancer
              antigen 3, the INPP5E gene for a 72kDa inositol
              polyphosphate-5-phosphatase, the gene for
              phosphatidylinositol polyphosphate 5-phosphatase type IV
              (PPI5PIV), a novel gene (KIAA0310), the 3' end of the
              NOTCH1 gene for Notch homolog 1 translocation-associated
              (Drosophila) and twenty CpG islands, complete sequence
          Length = 188462

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Minus

                                      
Query: 185    cccacgggcgacggcacccacgag 208
              ||||||||||||| ||||||||||
Sbjct: 166513 cccacgggcgacgtcacccacgag 166490

---

>gb|AC104422.4| Homo sapiens chromosome 18, clone RP11-260B14, complete sequence
          Length = 147210

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   ccagagggaagggcatcgtg 166
             ||||||||||||||||||||
Sbjct: 35948 ccagagggaagggcatcgtg 35967

---

>gb|AC100806.2| Homo sapiens chromosome 18, clone CTB-2341H11, complete sequence
          Length = 81641

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                 
Query: 147   ccagagggaagggcatcgtg 166
             ||||||||||||||||||||
Sbjct: 47211 ccagagggaagggcatcgtg 47230

---

>gb|AE009524.1| Brucella melitensis 16M chromosome I, section 81 of 195 of the
            complete sequence
          Length = 10900

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  ccctgcccaacatcaagatc 360
            ||||||||||||||||||||
Sbjct: 7760 ccctgcccaacatcaagatc 7741

---

>gb|AF308602.1|AF308602 Homo sapiens NOTCH 1 (N1) mRNA, complete cds
          Length = 7693

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 185 cccacgggcgacggcacccacgag 208
           ||||||||||||| ||||||||||
Sbjct: 703 cccacgggcgacgtcacccacgag 726

---

>dbj|BA000012.4| Mesorhizobium loti MAFF303099 DNA, complete genome
          Length = 7036071

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                   
Query: 118     cgatatctccgacgaccagc 137
               ||||||||||||||||||||
Sbjct: 4182002 cgatatctccgacgaccagc 4181983

---

>gb|AE017223.1| Brucella abortus biovar 1 str. 9-941 chromosome I, complete sequence
          Length = 2124241

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 341     ccctgcccaacatcaagatc 360
               ||||||||||||||||||||
Sbjct: 1147720 ccctgcccaacatcaagatc 1147739

---

>ref|XM_312558.2| Anopheles gambiae str. PEST ENSANGP00000014302
           (ENSANGG00000011813), partial mRNA
          Length = 1773

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                               
Query: 425 tcgccaagatgggcatcaac 444
           ||||||||||||||||||||
Sbjct: 641 tcgccaagatgggcatcaac 660

---

>emb|CR974583.24| Mouse DNA sequence from clone RP23-118G7 on chromosome 12, complete
              sequence
          Length = 219072

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                      
Query: 278    ggcttctacatcgctcctgctttc 301
              ||||||| ||||||||||||||||
Sbjct: 141825 ggcttctgcatcgctcctgctttc 141848

---

>gb|AF030027.1|AF030027 Equine herpesvirus 4 strain NS80567, complete genome
          Length = 145597

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 322   tctctccaaaacttcatgac 341
             ||||||||||||||||||||
Sbjct: 26997 tctctccaaaacttcatgac 26978

---

>emb|AM040264.1| Brucella melitensis biovar Abortus chromosome I, complete sequence, strain
               2308
          Length = 2121359

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                   
Query: 341     ccctgcccaacatcaagatc 360
               ||||||||||||||||||||
Sbjct: 1144872 ccctgcccaacatcaagatc 1144891

---

>gb|U51683.1|BAU51683 Brucella abortus phosphatidate cytidyltransferase (cdsA), group 1
            outer membrane protein (omp1), LpxD (lpxD), FabZ (fabZ),
            and LpxA (lpxA) genes, complete cds
          Length = 8895

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                
Query: 341  ccctgcccaacatcaagatc 360
            ||||||||||||||||||||
Sbjct: 8238 ccctgcccaacatcaagatc 8219

---

>emb|AL627188.18| Mouse DNA sequence from clone RP23-113G7 on chromosome 4, complete
             sequence
          Length = 208153

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Minus

                                 
Query: 470   tggagagtgggaacgctgga 489
             ||||||||||||||||||||
Sbjct: 90247 tggagagtgggaacgctgga 90228

---

>gb|M73980.1|HUMTAN1 Human TAN-1 mRNA (homologue of Drosophila Notch gene), 5' end
          Length = 7332

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 23/24 (95%)
 Strand = Plus / Plus

                                   
Query: 185 cccacgggcgacggcacccacgag 208
           ||||||||||||| ||||||||||
Sbjct: 703 cccacgggcgacgtcacccacgag 726

---

>emb|AL806521.9| Mouse DNA sequence from clone RP23-385N7 on chromosome 4, complete
            sequence
          Length = 187066

 Score = 40.1 bits (20), Expect = 8.1
 Identities = 20/20 (100%)
 Strand = Plus / Plus

                                
Query: 322  tctctccaaaacttcatgac 341
            ||||||||||||||||||||
Sbjct: 5026 tctctccaaaacttcatgac 5045


  Database: nt
    Posted date:  May 29, 2006 11:10 AM
  Number of letters in database: 3,984,495,279
  Number of sequences in database:  917,343
  
  Database: /shigen/export/home/twatanab/db/nt/nt.01
    Posted date:  May 29, 2006 11:16 AM
  Number of letters in database: 3,988,174,986
  Number of sequences in database:  835,257
  
  Database: /shigen/export/home/twatanab/db/nt/nt.02
    Posted date:  May 29, 2006 11:21 AM
  Number of letters in database: 3,991,246,324
  Number of sequences in database:  771,481
  
  Database: /shigen/export/home/twatanab/db/nt/nt.03
    Posted date:  May 29, 2006 11:27 AM
  Number of letters in database: 3,990,718,311
  Number of sequences in database:  977,174
  
  Database: /shigen/export/home/twatanab/db/nt/nt.04
    Posted date:  May 29, 2006 11:29 AM
  Number of letters in database: 1,278,410,368
  Number of sequences in database:  400,813
  
Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.37    0.711     1.31 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 4,685,726
Number of Sequences: 3902068
Number of extensions: 4685726
Number of successful extensions: 79854
Number of sequences better than 10.0: 111
Number of HSP's better than 10.0 without gapping: 111
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 79263
Number of HSP's gapped (non-prelim): 507
length of query: 598
length of database: 17,233,045,268
effective HSP length: 23
effective length of query: 575
effective length of database: 17,143,297,704
effective search space: 9857396179800
effective search space used: 9857396179800
T: 0
A: 0
X1: 6 (11.9 bits)
X2: 15 (29.7 bits)
S1: 12 (24.3 bits)
S2: 20 (40.1 bits)

---